@iloom/cli 0.6.1 → 0.7.0

package/dist/chunk-ZA575VLF.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/utils/git.ts"],"sourcesContent":["import path from 'path'\nimport { execa, type ExecaError } from 'execa'\nimport { type GitWorktree } from '../types/worktree.js'\nimport { SettingsManager, type SettingsManager as SettingsManagerType } from '../lib/SettingsManager.js'\nimport { MetadataManager } from '../lib/MetadataManager.js'\nimport { logger } from './logger.js'\n\n/**\n * Custom error class for Git command failures\n * Preserves exit code and stderr for precise error handling\n */\nexport class GitCommandError extends Error {\n  constructor(\n    message: string,\n    public readonly exitCode: number | undefined,\n    public readonly stderr: string\n  ) {\n    super(message)\n    this.name = 'GitCommandError'\n  }\n}\n\n/**\n * Execute a Git command and return the stdout result\n * Throws a GitCommandError if the command fails\n */\nexport async function executeGitCommand(\n  args: string[],\n  options?: { cwd?: string; timeout?: number; stdio?: 'inherit' | 'pipe'; env?: NodeJS.ProcessEnv }\n): Promise<string> {\n  try {\n    const result = await execa('git', args, {\n      cwd: options?.cwd ?? process.cwd(),\n      timeout: options?.timeout ?? 30000,\n      encoding: 'utf8',\n      stdio: options?.stdio ?? 'pipe',\n      verbose: logger.isDebugEnabled(),\n      // Spread env conditionally - only include if defined\n      ...(options?.env && { env: options.env }),\n    })\n\n    return result.stdout\n  } catch (error) {\n    const execaError = error as ExecaError\n    const stderr = execaError.stderr ?? execaError.message ?? 'Unknown Git error'\n    throw new GitCommandError(\n      `Git command failed: ${stderr}`,\n      execaError.exitCode,\n      stderr\n    )\n  }\n}\n\n/**\n * Parse git worktree list output into structured data\n * @param output - The output from git worktree list --porcelain\n * @param defaultBranch - Default branch name to use for bare repositories (defaults to 'main')\n */\nexport function parseWorktreeList(output: string, defaultBranch?: string): GitWorktree[] {\n  const worktrees: GitWorktree[] = []\n  const lines = output.trim().split('\\n')\n\n  let i = 0\n  while (i < lines.length) {\n    const pathLine = lines[i]\n    if (!pathLine?.startsWith('worktree ')) {\n      i++\n      continue\n    }\n\n    // Parse path line: \"worktree /path/to/worktree\"\n    const pathMatch = pathLine.match(/^worktree (.+)$/)\n    if (!pathMatch) {\n      i++\n      continue\n    }\n\n    let branch = ''\n    let commit = ''\n    let detached = false\n    let bare = false\n    let locked = false\n    let lockReason: string | undefined\n\n    // Process subsequent lines for this worktree\n    i++\n    while (i < lines.length && !lines[i]?.startsWith('worktree ')) {\n      const line = lines[i]?.trim()\n      if (!line) {\n        i++\n        continue\n      }\n\n      if (line === 'bare') {\n        bare = true\n        branch = defaultBranch ?? 'main' // Default assumption for bare repo\n      } else if (line === 'detached') {\n        detached = true\n        branch = 'HEAD'\n      } else if (line.startsWith('locked')) {\n        locked = true\n        const lockMatch = line.match(/^locked (.+)$/)\n        lockReason = lockMatch?.[1]\n        branch = branch || 'unknown'\n      } else if (line.startsWith('HEAD ')) {\n        // Parse commit line: \"HEAD abc123def456...\"\n        const commitMatch = line.match(/^HEAD ([a-f0-9]+)/)\n        if (commitMatch) {\n          commit = commitMatch[1] ?? ''\n        }\n      } else if (line.startsWith('branch ')) {\n        // Parse branch line: \"branch refs/heads/feature-branch\"\n        const branchMatch = line.match(/^branch refs\\/heads\\/(.+)$/)\n        branch = branchMatch?.[1] ?? line.replace('branch ', '')\n      }\n\n      i++\n    }\n\n    const worktree: GitWorktree = {\n      path: pathMatch[1] ?? '',\n      branch,\n      commit,\n      bare,\n      detached,\n      locked,\n    }\n\n    if (lockReason !== undefined) {\n      worktree.lockReason = lockReason\n    }\n\n    worktrees.push(worktree)\n  }\n\n  return worktrees\n}\n\n/**\n * Check if a branch name follows PR naming patterns\n */\nexport function isPRBranch(branchName: string): boolean {\n  const prPatterns = [\n    /^pr\\/\\d+/i, // pr/123, pr/123-feature-name\n    /^pull\\/\\d+/i, // pull/123\n    /^\\d+[-_]/, // 123-feature-name, 123_feature_name\n    /^feature\\/pr[-_]?\\d+/i, // feature/pr123, feature/pr-123\n    /^hotfix\\/pr[-_]?\\d+/i, // hotfix/pr123\n  ]\n\n  return prPatterns.some(pattern => pattern.test(branchName))\n}\n\n/**\n * Extract PR number from branch name\n */\nexport function extractPRNumber(branchName: string): number | null {\n  const patterns = [\n    /^pr\\/(\\d+)/i, // pr/123\n    /^pull\\/(\\d+)/i, // pull/123\n    /^(\\d+)[-_]/, // 123-feature-name\n    /^feature\\/pr[-_]?(\\d+)/i, // feature/pr123\n    /^hotfix\\/pr[-_]?(\\d+)/i, // hotfix/pr123\n    /pr[-_]?(\\d+)/i, // anywhere with pr123 or pr-123\n  ]\n\n  for (const pattern of patterns) {\n    const match = branchName.match(pattern)\n    if (match?.[1]) {\n      const num = parseInt(match[1], 10)\n      if (!isNaN(num)) return num\n    }\n  }\n\n  return null\n}\n\n/**\n * Extract issue number from branch name\n * Supports both new format (issue-{issueId}__{slug}) and old format (issue-{number}-{slug})\n * @returns string issue ID (alphanumeric) or null if not found\n */\nexport function extractIssueNumber(branchName: string): string | null {\n  // Priority 1: New format - issue-{issueId}__ (alphanumeric ID with double underscore)\n  const newFormatPattern = /issue-([^_]+)__/i\n  const newMatch = branchName.match(newFormatPattern)\n  if (newMatch?.[1]) return newMatch[1]\n\n  // Priority 2: Old format - issue-{number}- or issue-{number}$ (numeric only, dash or end)\n  const oldFormatPattern = /issue-(\\d+)(?:-|$)/i\n  const oldMatch = branchName.match(oldFormatPattern)\n  if (oldMatch?.[1]) return oldMatch[1]\n\n  // Priority 3: Alphanumeric ID at end (either format without description)\n  const alphanumericEndPattern = /issue-([^_\\s/]+)$/i\n  const alphanumericMatch = branchName.match(alphanumericEndPattern)\n  if (alphanumericMatch?.[1]) return alphanumericMatch[1]\n\n  // Priority 4: Legacy patterns (issue_N, leading number)\n  const legacyPatterns = [\n    /issue_(\\d+)/i,     // issue_42\n    /^(\\d+)-/,          // 42-feature-name\n  ]\n  for (const pattern of legacyPatterns) {\n    const match = branchName.match(pattern)\n    if (match?.[1]) return match[1]\n  }\n\n  return null\n}\n\n/**\n * Check if a path follows worktree naming patterns\n */\nexport function isWorktreePath(path: string): boolean {\n  const worktreePatterns = [\n    /\\/worktrees?\\//i, // Contains /worktree/ or /worktrees/\n    /\\/workspace[-_]?\\d+/i, // workspace123, workspace-123\n    /\\/issue[-_]?\\d+/i, // issue123, issue-123\n    /\\/pr[-_]?\\d+/i, // pr123, pr-123\n    /-worktree$/i, // ends with -worktree\n    /\\.worktree$/i, // ends with .worktree\n  ]\n\n  return worktreePatterns.some(pattern => pattern.test(path))\n}\n\n/**\n * Generate a worktree path based on branch name and root directory\n * For PRs, adds _pr_<PR_NUM> suffix to distinguish from issue branches\n */\nexport function generateWorktreePath(\n  branchName: string,\n  rootDir: string = process.cwd(),\n  options?: { isPR?: boolean; prNumber?: number; prefix?: string }\n): string {\n  // Replace slashes with dashes (matches bash line 593)\n  let sanitized = branchName.replace(/\\//g, '-')\n\n  // Add PR suffix if this is a PR (matches bash lines 595-597)\n  if (options?.isPR && options?.prNumber) {\n    sanitized = `${sanitized}_pr_${options.prNumber}`\n  }\n\n  const parentDir = path.dirname(rootDir)\n\n  // Handle prefix logic\n  let prefix: string\n\n  if (options?.prefix === undefined) {\n    // No prefix in options - calculate default: <basename>-looms\n    const mainFolderName = path.basename(rootDir)\n    prefix = mainFolderName ? `${mainFolderName}-looms/` : 'looms/'\n  } else if (options.prefix === '') {\n    // Empty string = no prefix mode\n    prefix = ''\n  } else {\n    // Custom prefix provided\n    prefix = options.prefix\n\n    // Check if prefix contains forward slashes (nested directory structure)\n    const hasNestedPath = prefix.includes('/')\n\n    if (hasNestedPath) {\n      // Check if it ends with a separator character (dash, underscore, or slash)\n      const endsWithSeparator = /[-_/]$/.test(prefix)\n\n      if (!endsWithSeparator) {\n        // Has nested path but no trailing separator: auto-append hyphen\n        // Example: \"temp/looms\" becomes \"temp/looms-\"\n        prefix = `${prefix}-`\n      }\n      // If it already ends with -, _, or /, keep as-is\n    } else {\n      // Single-level prefix: auto-append separator if it doesn't end with one\n      const endsWithSeparator = /[-_]$/.test(prefix)\n      if (!endsWithSeparator) {\n        prefix = `${prefix}-`\n      }\n    }\n  }\n\n  // Apply prefix (or not, if empty)\n  if (prefix === '') {\n    return path.join(parentDir, sanitized)\n  } else if (prefix.endsWith('/')) {\n    // Forward slash = nested directory, use path.join for proper handling\n    return path.join(parentDir, prefix, sanitized)\n  } else if (prefix.includes('/')) {\n    // Contains slash but doesn't end with slash = nested with separator (e.g., \"looms/myprefix-\")\n    // Split and handle: last part is prefix with separator, rest is directory path\n    const lastSlashIndex = prefix.lastIndexOf('/')\n    const dirPath = prefix.substring(0, lastSlashIndex)\n    const prefixWithSeparator = prefix.substring(lastSlashIndex + 1)\n    return path.join(parentDir, dirPath, `${prefixWithSeparator}${sanitized}`)\n  } else {\n    // Dash/underscore separator = single directory name\n    return path.join(parentDir, `${prefix}${sanitized}`)\n  }\n}\n\n/**\n * Validate that a directory is a valid Git repository\n */\nexport async function isValidGitRepo(path: string): Promise<boolean> {\n  try {\n    await executeGitCommand(['rev-parse', '--git-dir'], { cwd: path })\n    return true\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the current branch name for a repository\n */\nexport async function getCurrentBranch(path: string = process.cwd()): Promise<string | null> {\n  try {\n    const result = await executeGitCommand(['branch', '--show-current'], { cwd: path })\n    return result.trim()\n  } catch {\n    return null\n  }\n}\n\n/**\n * Check if a branch exists (local or remote)\n */\nexport async function branchExists(\n  branchName: string,\n  path: string = process.cwd(),\n  includeRemote = true\n): Promise<boolean> {\n  try {\n    // Check local branches\n    const localResult = await executeGitCommand(['branch', '--list', branchName], { cwd: path })\n    if (localResult.trim()) {\n      return true\n    }\n\n    // Check remote branches if requested\n    if (includeRemote) {\n      const remoteResult = await executeGitCommand(['branch', '-r', '--list', `*/${branchName}`], {\n        cwd: path,\n      })\n      if (remoteResult.trim()) {\n        return true\n      }\n    }\n\n    return false\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the root directory of the current worktree\n * Returns the worktree root when in a linked worktree, or main repo root when in main worktree\n */\nexport async function getWorktreeRoot(path: string = process.cwd()): Promise<string | null> {\n  try {\n    const result = await executeGitCommand(['rev-parse', '--show-toplevel'], { cwd: path })\n    return result.trim()\n  } catch {\n    return null\n  }\n}\n\n/**\n * Get the main repository root directory\n * Returns the main repo root even when called from a linked worktree\n */\nexport async function getRepoRoot(path: string = process.cwd()): Promise<string | null> {\n  try {\n    // Get the common git directory (shared by all worktrees)\n    const gitCommonDir = await executeGitCommand(\n      ['rev-parse', '--path-format=absolute', '--git-common-dir'],\n      { cwd: path }\n    )\n    const trimmedPath = gitCommonDir.trim()\n\n    // Handle linked worktree: /path/to/repo/.git/worktrees/worktree-name -> /path/to/repo\n    // Handle main worktree: /path/to/repo/.git -> /path/to/repo\n    const repoRoot = trimmedPath\n      .replace(/\\/\\.git\\/worktrees\\/[^/]+$/, '')  // Remove /.git/worktrees/name suffix\n      .replace(/\\/\\.git$/, '')                     // Remove /.git suffix\n\n    return repoRoot\n  } catch(error) {\n    // \"not a git repository\" is expected when running outside a git repo - use debug level\n    // Check for GitCommandError with exit code 128 or the specific stderr message\n    if (error instanceof GitCommandError &&\n        (error.exitCode === 128 || /fatal: not a git repository/i.test(error.stderr))) {\n      logger.info(`Note: No git repository detected: ${path}`)\n    } else {\n      const errorMessage = error instanceof Error ? error.message : String(error)\n      logger.warn(`Failed to determine repo root from git-common-dir: ${path}`, errorMessage)\n    }\n    return null\n  }\n}\n\n/**\n * Find the worktree path where main branch is checked out\n * Copies bash script approach: parse git worktree list to find main\n */\nexport async function findMainWorktreePath(\n  path: string = process.cwd(),\n  options?: { mainBranch?: string }\n): Promise<string> {\n  try {\n    const output = await executeGitCommand(['worktree', 'list', '--porcelain'], { cwd: path })\n    const worktrees = parseWorktreeList(output, options?.mainBranch)\n\n    // Guard: empty worktree list\n    if (worktrees.length === 0) {\n      throw new Error('No worktrees found in repository')\n    }\n\n    // Tier 1: Check for specified mainBranch in options\n    if (options?.mainBranch) {\n      const specified = worktrees.find(wt => wt.branch === options.mainBranch)\n      if (!specified?.path) {\n        throw new Error(\n          `No worktree found with branch '${options.mainBranch}' (specified in settings). Available worktrees: ${worktrees.map(wt => `${wt.path} (${wt.branch})`).join(', ')}`\n        )\n      }\n      return specified.path\n    }\n\n    // Tier 2: Look for \"main\" branch\n    const mainBranch = worktrees.find(wt => wt.branch === 'main')\n    if (mainBranch?.path) {\n      return mainBranch.path\n    }\n\n    // Tier 3: Use first worktree (primary worktree)\n    const firstWorktree = worktrees[0]\n    if (!firstWorktree?.path) {\n      throw new Error('Failed to determine primary worktree path')\n    }\n    return firstWorktree.path\n  } catch (error) {\n    if (\n      error instanceof Error &&\n      (error.message.includes('No worktree found with branch') ||\n        error.message.includes('No worktrees found') ||\n        error.message.includes('Failed to determine primary worktree'))\n    ) {\n      // Re-throw our specific errors\n      throw error\n    }\n    throw new Error(`Failed to find main worktree: ${error instanceof Error ? error.message : String(error)}`)\n  }\n}\n\n/**\n * Find main worktree path with automatic settings loading\n *\n * This is a convenience wrapper that:\n * 1. Loads project settings from .iloom/settings.json\n * 2. Extracts mainBranch configuration if present\n * 3. Calls findMainWorktreePath with appropriate options\n *\n * @param path - Path to search from (defaults to process.cwd())\n * @param settingsManager - Optional SettingsManager instance (for DI/testing)\n * @returns Path to main worktree\n * @throws Error if main worktree cannot be found\n */\nexport async function findMainWorktreePathWithSettings(\n  path?: string,\n  settingsManager?: SettingsManagerType\n): Promise<string> {\n  // Lazy load SettingsManager to avoid circular dependencies\n  settingsManager ??= new SettingsManager()\n\n  const settings = await settingsManager.loadSettings(path)\n  const findOptions = settings.mainBranch ? { mainBranch: settings.mainBranch } : undefined\n  return findMainWorktreePath(path, findOptions)\n}\n\n/**\n * Find the worktree path where a specific branch is checked out\n *\n * Used by MergeManager to find the correct worktree for child loom merges.\n * When finishing a child loom, we need to find where the PARENT branch is\n * checked out (the merge target), not where settings.mainBranch is checked out.\n *\n * @param branchName - The branch name to find\n * @param path - Path to search from (defaults to process.cwd())\n * @returns Path to worktree where the branch is checked out\n * @throws Error if no worktree has the specified branch checked out\n */\nexport async function findWorktreeForBranch(\n  branchName: string,\n  path: string = process.cwd()\n): Promise<string> {\n  try {\n    const output = await executeGitCommand(['worktree', 'list', '--porcelain'], { cwd: path })\n    const worktrees = parseWorktreeList(output, branchName)\n\n    // Guard: empty worktree list\n    if (worktrees.length === 0) {\n      throw new Error('No worktrees found in repository')\n    }\n\n    // Find the worktree with the specified branch\n    const targetWorktree = worktrees.find(wt => wt.branch === branchName)\n    if (!targetWorktree?.path) {\n      throw new Error(\n        `No worktree found with branch '${branchName}' checked out. ` +\n        `Available worktrees: ${worktrees.map(wt => `${wt.path} (${wt.branch})`).join(', ')}`\n      )\n    }\n    return targetWorktree.path\n  } catch (error) {\n    if (\n      error instanceof Error &&\n      (error.message.includes('No worktree found with branch') ||\n        error.message.includes('No worktrees found'))\n    ) {\n      // Re-throw our specific errors\n      throw error\n    }\n    throw new Error(`Failed to find worktree for branch '${branchName}': ${error instanceof Error ? error.message : String(error)}`)\n  }\n}\n\n/**\n * Check if there are uncommitted changes in a repository\n */\nexport async function hasUncommittedChanges(path: string = process.cwd()): Promise<boolean> {\n  try {\n    const result = await executeGitCommand(['status', '--porcelain'], { cwd: path })\n    return result.trim().length > 0\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the default branch name for a repository\n */\nexport async function getDefaultBranch(path: string = process.cwd()): Promise<string> {\n  try {\n    // Try to get from remote\n    const remoteResult = await executeGitCommand(['symbolic-ref', 'refs/remotes/origin/HEAD'], {\n      cwd: path,\n    })\n    const match = remoteResult.match(/refs\\/remotes\\/origin\\/(.+)/)\n    if (match) return match[1] ?? 'main'\n\n    // Fallback to common default branch names\n    const commonDefaults = ['main', 'master', 'develop']\n    for (const branch of commonDefaults) {\n      if (await branchExists(branch, path)) {\n        return branch\n      }\n    }\n\n    return 'main' // Final fallback\n  } catch {\n    return 'main'\n  }\n}\n\n/**\n * Find all branches related to a GitHub issue or PR number\n * Matches patterns like:\n * - Issue patterns: issue-25, issue/25, 25-feature, feat-25, feat/issue-25\n * - PR patterns: pr/25, pull/25, pr-25, feature/pr-25\n *\n * Based on bash cleanup-worktree.sh find_issue_branches() (lines 133-154)\n *\n * @param issueNumber - The issue or PR number to search for\n * @param path - Working directory to search from (defaults to process.cwd())\n * @param settingsManager - Optional SettingsManager instance (for DI/testing)\n */\nexport async function findAllBranchesForIssue(\n  issueNumber: string | number,\n  path: string = process.cwd(),\n  settingsManager?: SettingsManagerType\n): Promise<string[]> {\n  // Lazy load SettingsManager to avoid circular dependencies\n  if (!settingsManager) {\n    const { SettingsManager: SM } = await import('../lib/SettingsManager.js')\n    settingsManager = new SM()\n  }\n\n  // Get protected branches list from centralized method\n  const protectedBranches = await settingsManager.getProtectedBranches(path)\n\n  // Get all branches (local and remote)\n  const output = await executeGitCommand(['branch', '-a'], { cwd: path })\n\n  const branches: string[] = []\n  const lines = output.split('\\n').filter(Boolean)\n\n  for (const line of lines) {\n    // Skip remotes/origin/HEAD pointer\n    if (line.includes('remotes/origin/HEAD')) {\n      continue\n    }\n\n    // Clean the branch name:\n    // 1. Remove git status markers (* + spaces at start)\n    let cleanBranch = line.replace(/^[*+ ]+/, '')\n\n    // 2. Remove 'origin/' prefix if present\n    cleanBranch = cleanBranch.replace(/^origin\\//, '')\n\n    // 3. Remove 'remotes/origin/' prefix if present\n    cleanBranch = cleanBranch.replace(/^remotes\\/origin\\//, '')\n\n    // 4. Trim any remaining whitespace\n    cleanBranch = cleanBranch.trim()\n\n    // Skip protected branches\n    if (protectedBranches.includes(cleanBranch)) {\n      continue\n    }\n\n    // Check if branch contains issue number with strict word boundary pattern\n    // The issue number must NOT be:\n    // - Part of a larger number (preceded or followed by a digit)\n    // - After an unknown word (like \"tissue-25\")\n    // The issue number CAN be:\n    // - At start: \"25-feature\"\n    // - After known prefix + separator: \"issue-25\", \"feat-25\", \"fix-25\", \"pr-25\"\n    // - After just a separator with no prefix: test_25 (separator at start)\n\n    // First check: not part of a larger number\n    const notPartOfNumber = new RegExp(`(?<!\\\\d)${issueNumber}(?!\\\\d)`)\n    if (!notPartOfNumber.test(cleanBranch)) {\n      continue\n    }\n\n    // Second check: if preceded by letters, validate they're known issue-related prefixes\n    // This prevents \"tissue-25\" but allows \"issue-25\", \"feat-25\", etc.\n    const beforeNumber = cleanBranch.substring(0, cleanBranch.indexOf(String(issueNumber)))\n\n    if (beforeNumber) {\n      // Extract the last word (letters) before the number\n      const lastWord = beforeNumber.match(/([a-zA-Z]+)[-_/\\s]*$/)\n      if (lastWord?.[1]) {\n        const word = lastWord[1].toLowerCase()\n        // Known prefixes for issue-related branches\n        const knownPrefixes = [\n          'issue', 'issues',\n          'feat', 'feature', 'features',\n          'fix', 'fixes', 'bugfix', 'hotfix',\n          'pr', 'pull',\n          'test', 'tests',\n          'chore',\n          'docs',\n          'refactor',\n          'perf',\n          'style',\n          'ci',\n          'build',\n          'revert'\n        ]\n\n        // If we found a word and it's NOT in the known list, skip this branch\n        if (!knownPrefixes.includes(word)) {\n          continue\n        }\n      }\n    }\n\n    // Passed all checks - add to results\n    if (!branches.includes(cleanBranch)) {\n      branches.push(cleanBranch)\n    }\n  }\n\n  return branches\n}\n\n/**\n * Check if a repository is empty (has no commits yet)\n * @param path - Repository path to check (defaults to process.cwd())\n * @returns true if repository has no commits, false otherwise\n */\nexport async function isEmptyRepository(path: string = process.cwd()): Promise<boolean> {\n  try {\n    await executeGitCommand(['rev-parse', '--verify', 'HEAD'], { cwd: path })\n    return false // HEAD exists, repo has commits\n  } catch {\n    return true // HEAD doesn't exist, repo is empty\n  }\n}\n\n/**\n * Ensure repository has at least one commit\n * Creates an initial empty commit if repository is empty\n * @param path - Repository path (defaults to process.cwd())\n */\nexport async function ensureRepositoryHasCommits(path: string = process.cwd()): Promise<void> {\n  const isEmpty = await isEmptyRepository(path)\n  if (isEmpty) {\n    await executeGitCommand(['commit', '--no-verify', '--allow-empty', '-m', 'Initial commit'], { cwd: path })\n  }\n}\n\n/**\n * Push a branch to remote repository\n * Used for PR workflow to push changes to remote without merging locally\n *\n * @param branchName - The branch name to push\n * @param worktreePath - The worktree path where the branch is checked out\n * @param options - Push options\n * @throws Error if push fails\n */\nexport async function pushBranchToRemote(\n  branchName: string,\n  worktreePath: string,\n  options?: { dryRun?: boolean }\n): Promise<void> {\n  if (options?.dryRun) {\n    // In dry-run mode, just log what would be done\n    return\n  }\n\n  try {\n    // Execute: git push origin <branch-name>\n    // This matches the bash script behavior (merge-and-clean.sh line 359)\n    await executeGitCommand(['push', 'origin', branchName], {\n      cwd: worktreePath,\n      timeout: 120000, // 120 second timeout for push operations\n    })\n  } catch (error) {\n    // Provide helpful error message based on common push failures\n    const errorMessage = error instanceof Error ? error.message : String(error)\n\n    // Check for common error patterns and provide context, but ALWAYS include original error\n    if (errorMessage.includes('failed to push') || errorMessage.includes('rejected')) {\n      throw new Error(\n        `Failed to push changes to origin/${branchName}\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Possible causes:\\n` +\n        `   • Remote branch was deleted\\n` +\n        `   • Push was rejected (non-fast-forward)\\n` +\n        `   • Network connectivity issues\\n\\n` +\n        `   To retry: il finish --pr <number>\\n` +\n        `   To force push: git push origin ${branchName} --force`\n      )\n    }\n\n    if (errorMessage.includes('Could not resolve host') || errorMessage.includes('network')) {\n      throw new Error(\n        `Failed to push changes to origin/${branchName}: Network connectivity issues\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Check your internet connection and try again.`\n      )\n    }\n\n    if (errorMessage.includes('No such remote')) {\n      throw new Error(\n        `Failed to push changes: Remote 'origin' not found\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Configure remote: git remote add origin <url>`\n      )\n    }\n\n    // For other errors, re-throw with original message\n    throw new Error(`Failed to push to remote: ${errorMessage}`)\n  }\n}\n\n/**\n * Check if a file is tracked by git\n * Uses git ls-files to check if file is in the index\n * @param filePath - Absolute or relative path to the file\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if file is tracked, false otherwise\n */\nexport async function isFileTrackedByGit(\n  filePath: string,\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    const result = await executeGitCommand(\n      ['ls-files', '--error-unmatch', filePath],\n      { cwd }\n    )\n    return result.trim().length > 0\n  } catch (error) {\n    // Only return false if it's the specific \"pathspec did not match\" error\n    const errorMessage = error instanceof Error ? error.message : String(error)\n    if (errorMessage.includes('pathspec') && errorMessage.includes('did not match')) {\n      return false\n    }\n    // Re-throw other errors\n    throw error\n  }\n}\n\n/**\n * Check if a file is gitignored\n * Uses `git check-ignore` which handles nested gitignore files and global patterns\n *\n * @param filePath - Path to file to check (relative to repo root)\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if file IS ignored, false if NOT ignored or on error\n */\nexport async function isFileGitignored(\n  filePath: string,\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    await executeGitCommand(['check-ignore', '-q', filePath], { cwd })\n    return true // Exit 0 = file IS ignored\n  } catch {\n    return false // Exit 1 = NOT ignored (or error)\n  }\n}\n\n/**\n * Check if a branch is merged into the main branch\n *\n * Uses `git merge-base --is-ancestor` which is more reliable than `git branch -d`'s check.\n * The `-d` flag checks against current HEAD, which can give false positives when:\n * - Running from a worktree where main isn't checked out\n * - Squash or rebase merges were used\n *\n * This function explicitly checks if the branch tip is an ancestor of the main branch,\n * providing consistent results regardless of which worktree the command runs from.\n *\n * @param branchName - The branch to check\n * @param mainBranch - The main branch to check against (defaults to 'main')\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if branch is merged into main, false otherwise\n */\nexport async function isBranchMergedIntoMain(\n  branchName: string,\n  mainBranch: string = 'main',\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    // git merge-base --is-ancestor exits 0 if branchName is ancestor of mainBranch, 1 if not\n    await executeGitCommand(['merge-base', '--is-ancestor', branchName, mainBranch], { cwd })\n    return true\n  } catch {\n    return false\n  }\n}\n\n/**\n * Check if a branch exists on the remote (origin) and is up-to-date with local\n * Useful for GitHub-PR workflows to ensure branch has been pushed and is current\n *\n * @param branchName - Name of the branch to check\n * @param cwd - Working directory to run git command in\n * @returns Promise<boolean> - true if remote branch exists and matches local HEAD, false otherwise\n */\nexport async function isRemoteBranchUpToDate(\n  branchName: string,\n  cwd: string\n): Promise<boolean> {\n  try {\n    // First, check if remote branch exists and get its commit hash\n    const remoteResult = await executeGitCommand(['ls-remote', '--heads', 'origin', branchName], { cwd })\n\n    if (remoteResult.trim().length === 0) {\n      // Remote branch doesn't exist\n      return false\n    }\n\n    // Extract the commit hash from ls-remote output (format: \"hash\\trefs/heads/branchname\")\n    const remoteCommit = remoteResult.trim().split('\\t')[0]\n\n    // Get the local branch's HEAD commit\n    const localCommit = await executeGitCommand(['rev-parse', branchName], { cwd })\n\n    // Both must exist and match\n    return localCommit.trim() === remoteCommit\n  } catch {\n    return false\n  }\n}\n\n/**\n * Result of checking remote branch status for safety validation\n */\nexport interface RemoteBranchStatus {\n  /** Whether the remote branch exists */\n  exists: boolean\n  /** Whether the remote is ahead of local (has commits not present locally) */\n  remoteAhead: boolean\n  /** Whether local is ahead of remote (has unpushed commits) */\n  localAhead: boolean\n  /** Whether a network error occurred during the check */\n  networkError: boolean\n  /** Error message if network error occurred */\n  errorMessage?: string\n}\n\n/**\n * Check the status of a remote branch for safety validation during cleanup\n * This function provides detailed status needed for the 5-point safety check:\n *\n * The key insight: we care about DATA LOSS, not about remote state\n * - Remote ahead of local is SAFE (commits exist on remote, no data loss)\n * - Local ahead of remote is DANGEROUS (unpushed commits would be lost)\n *\n * 5-point safety logic:\n * 1. Network error -> BLOCK (can't verify safety)\n * 2. Remote ahead of local -> OK (no data loss - commits exist on remote)\n * 3. Local ahead of remote (unpushed commits) -> BLOCK (data loss risk)\n * 4. No remote, merged to main -> OK (work is in main)\n * 5. No remote, NOT merged to main -> BLOCK (unmerged work would be lost)\n *\n * @param branchName - Name of the branch to check\n * @param cwd - Working directory to run git command in\n * @returns Promise<RemoteBranchStatus> - Detailed status of the remote branch\n */\nexport async function checkRemoteBranchStatus(\n  branchName: string,\n  cwd: string\n): Promise<RemoteBranchStatus> {\n  try {\n    // First, fetch to ensure we have the latest remote refs\n    // This is important to accurately detect if remote is ahead\n    try {\n      await executeGitCommand(['fetch', 'origin', branchName], { cwd, timeout: 30000 })\n    } catch (fetchError) {\n      // Fetch failing for a specific branch is OK - branch might not exist on remote\n      // We'll detect this in the ls-remote call\n      const fetchErrorMessage = fetchError instanceof Error ? fetchError.message : String(fetchError)\n\n      // Check if this is a network error vs branch not found\n      if (fetchErrorMessage.includes('Could not resolve host') ||\n          fetchErrorMessage.includes('unable to access') ||\n          fetchErrorMessage.includes('network') ||\n          fetchErrorMessage.includes('Connection refused') ||\n          fetchErrorMessage.includes('Connection timed out')) {\n        return {\n          exists: false,\n          remoteAhead: false,\n          localAhead: false,\n          networkError: true,\n          errorMessage: fetchErrorMessage\n        }\n      }\n      // Otherwise continue - branch might just not exist on remote\n    }\n\n    // Check if remote branch exists using ls-remote\n    const remoteResult = await executeGitCommand(['ls-remote', '--heads', 'origin', branchName], { cwd })\n\n    if (remoteResult.trim().length === 0) {\n      // Remote branch doesn't exist\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Remote branch exists - check if it's ahead of local\n    // Extract the remote commit hash\n    const remoteCommit = remoteResult.trim().split('\\t')[0]\n\n    // Guard against undefined (shouldn't happen but TypeScript wants it)\n    if (!remoteCommit) {\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Get the local branch's HEAD commit\n    const localCommit = await executeGitCommand(['rev-parse', branchName], { cwd })\n    const localCommitTrimmed = localCommit.trim()\n\n    if (remoteCommit === localCommitTrimmed) {\n      // Remote and local are at the same commit - safe (no unpushed commits)\n      return {\n        exists: true,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Commits differ - check if remote is ahead of local\n    // Use merge-base to find common ancestor, then compare\n    try {\n      // Check if localCommit is an ancestor of remoteCommit (meaning remote is ahead)\n      await executeGitCommand(['merge-base', '--is-ancestor', localCommitTrimmed, remoteCommit], { cwd })\n      // If we get here, local IS an ancestor of remote, meaning remote is ahead\n      // This is SAFE - no data loss because commits exist on remote\n      return {\n        exists: true,\n        remoteAhead: true,\n        localAhead: false,\n        networkError: false\n      }\n    } catch {\n      // Local is NOT an ancestor of remote\n      // This means local is ahead or branches have diverged\n      // Either way, local has unpushed commits - this is DANGEROUS (data loss risk)\n      return {\n        exists: true,\n        remoteAhead: false,\n        localAhead: true,\n        networkError: false\n      }\n    }\n  } catch (error) {\n    // Check if this is a network error\n    const errorMessage = error instanceof Error ? error.message : String(error)\n\n    if (errorMessage.includes('Could not resolve host') ||\n        errorMessage.includes('unable to access') ||\n        errorMessage.includes('network') ||\n        errorMessage.includes('Connection refused') ||\n        errorMessage.includes('Connection timed out')) {\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: true,\n        errorMessage\n      }\n    }\n\n    // For other errors, assume remote doesn't exist\n    return {\n      exists: false,\n      remoteAhead: false,\n      localAhead: false,\n      networkError: false\n    }\n  }\n}\n\n/**\n * Get the merge target branch for a loom\n * Priority: parent loom metadata (parentLoom.branchName) > configured main branch > 'main'\n *\n * This is the shared utility for determining where a branch should merge to.\n * Child looms merge to their parent branch, standalone looms merge to main.\n *\n * @param worktreePath - Path to load metadata/settings from (defaults to process.cwd())\n * @param options - Optional dependency injection for testing\n * @returns The branch name to merge into\n */\nexport async function getMergeTargetBranch(\n  worktreePath: string = process.cwd(),\n  options?: {\n    settingsManager?: SettingsManagerType\n    metadataManager?: MetadataManager\n  }\n): Promise<string> {\n  const settingsManager = options?.settingsManager ?? new SettingsManager()\n  const metadataManager = options?.metadataManager ?? new MetadataManager()\n\n  // Check for parent loom metadata first (child looms merge to parent)\n  logger.debug(`Checking for parent loom metadata at: ${worktreePath}`)\n  const metadata = await metadataManager.readMetadata(worktreePath)\n  if (metadata?.parentLoom?.branchName) {\n    logger.debug(`Using parent branch as merge target: ${metadata.parentLoom.branchName}`)\n    return metadata.parentLoom.branchName\n  }\n  logger.debug('No parent loom metadata found, falling back to settings')\n\n  // Fall back to configured main branch\n  const settings = await settingsManager.loadSettings(worktreePath)\n  const mainBranch = settings.mainBranch ?? 'main'\n  logger.debug(`Using configured main branch as merge target: ${mainBranch}`)\n  return mainBranch\n}\n\n/**\n * Placeholder commit prefix used by github-draft-pr mode.\n * Created during il start to enable draft PR creation (GitHub requires at least one commit ahead of base).\n * Removed during il finish before the final push to maintain clean commit history.\n */\nexport const PLACEHOLDER_COMMIT_PREFIX = '[iloom]'\n\n/**\n * Check if HEAD commit is a placeholder commit\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if HEAD is a placeholder commit\n */\nexport async function isPlaceholderCommit(cwd: string = process.cwd()): Promise<boolean> {\n  try {\n    const subject = await executeGitCommand(['log', '-1', '--format=%s', 'HEAD'], { cwd })\n    return subject.trim().startsWith(PLACEHOLDER_COMMIT_PREFIX)\n  } catch {\n    // No HEAD (empty repo) or other error - not a placeholder\n    return false\n  }\n}\n\n/**\n * Find placeholder commit SHA in history using git log --grep\n * @param worktreePath - Working directory\n * @returns SHA of placeholder commit if found, null otherwise\n */\nexport async function findPlaceholderCommitSha(worktreePath: string): Promise<string | null> {\n  try {\n    // Search commit history for placeholder prefix\n    // Use --fixed-strings to treat the pattern literally (brackets are regex special chars)\n    const log = await executeGitCommand(\n      ['log', '--format=%H', '--fixed-strings', '--grep', PLACEHOLDER_COMMIT_PREFIX, '-n', '1'],\n      { cwd: worktreePath }\n    )\n    const sha = log.trim()\n    if (sha.length === 0) {\n      return null\n    }\n\n    // Verify the found commit actually has the placeholder prefix in its subject\n    // This guards against git grep matching in commit body instead of subject\n    const subject = await executeGitCommand(\n      ['log', '-1', '--format=%s', sha],\n      { cwd: worktreePath }\n    )\n    if (!subject.trim().startsWith(PLACEHOLDER_COMMIT_PREFIX)) {\n      return null\n    }\n\n    return sha\n  } catch {\n    return null\n  }\n}\n\n/**\n * Remove placeholder commit when it's HEAD\n * Uses soft reset to preserve any staged changes\n * @param worktreePath - Working directory\n * @returns true if placeholder was removed\n */\nexport async function removePlaceholderCommitFromHead(worktreePath: string): Promise<boolean> {\n  if (!await isPlaceholderCommit(worktreePath)) {\n    return false\n  }\n  await executeGitCommand(['reset', '--soft', 'HEAD~1'], { cwd: worktreePath })\n  return true\n}\n\n/**\n * Remove placeholder commit from history using rebase\n * Used when user has made commits on top of placeholder\n * @param worktreePath - Working directory\n * @param placeholderSha - SHA of the placeholder commit to remove\n * @throws Error if rebase fails\n */\nexport async function removePlaceholderCommitFromHistory(\n  worktreePath: string,\n  placeholderSha: string\n): Promise<void> {\n  // Get parent of placeholder commit\n  const parentSha = await executeGitCommand(\n    ['rev-parse', `${placeholderSha}^`],\n    { cwd: worktreePath }\n  )\n\n  // Rebase to drop the placeholder: rebase --onto parent^ placeholder\n  await executeGitCommand(\n    ['rebase', '--onto', parentSha.trim(), placeholderSha],\n    { cwd: worktreePath }\n  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package/dist/{claude-H33OQMXO.js → claude-6H36IBHO.js}

@@ -3,18 +3,20 @@ import {
   detectClaudeCli,
   generateBranchName,
   generateDeterministicSessionId,
+  generateRandomSessionId,
   getClaudeVersion,
   launchClaude,
   launchClaudeInNewTerminalWindow
-} from "./chunk-AEIMYF4P.js";
+} from "./chunk-FP7G7DG3.js";
 import "./chunk-6MLEBAYZ.js";
 import "./chunk-VT4PDUYT.js";
 export {
   detectClaudeCli,
   generateBranchName,
   generateDeterministicSessionId,
+  generateRandomSessionId,
   getClaudeVersion,
   launchClaude,
   launchClaudeInNewTerminalWindow
 };
-//# sourceMappingURL=claude-H33OQMXO.js.map
+//# sourceMappingURL=claude-6H36IBHO.js.map

package/dist/{cleanup-BRUAINKE.js → cleanup-ZPOMRSNN.js}

@@ -5,31 +5,31 @@ import {
   EnvironmentManager,
   LoomManager,
   ResourceCleanup
-} from "./chunk-I75JMBNB.js";
+} from "./chunk-S7YMZQUD.js";
 import {
   ProcessManager
-} from "./chunk-VU3QMIP2.js";
-import "./chunk-AXX3QIKK.js";
+} from "./chunk-453NC377.js";
 import {
   IdentifierParser
-} from "./chunk-UQIXZ3BA.js";
+} from "./chunk-5V74K5ZA.js";
 import {
   createNeonProviderFromSettings
 } from "./chunk-7LSSNB7Y.js";
-import "./chunk-BXCPJJYM.js";
+import "./chunk-LLWX3PCW.js";
 import {
   GitWorktreeManager
-} from "./chunk-EK3XCAAS.js";
-import "./chunk-GEXP5IOF.js";
+} from "./chunk-UDRZY65Y.js";
+import "./chunk-ITN64ENQ.js";
+import "./chunk-ZA575VLF.js";
 import {
   SettingsManager
-} from "./chunk-F6WVM437.js";
-import "./chunk-CFUWQHCJ.js";
+} from "./chunk-WFQ5CLTR.js";
+import "./chunk-VWGKGNJP.js";
 import {
   promptConfirmation
 } from "./chunk-ZX3GTM7O.js";
 import "./chunk-433MOLAU.js";
-import "./chunk-AEIMYF4P.js";
+import "./chunk-FP7G7DG3.js";
 import {
   getLogger
 } from "./chunk-6MLEBAYZ.js";
@@ -75,10 +75,10 @@ var CleanupCommand = class {
       cliIsolationManager
     );
     if (!this.loomManager) {
-      const { GitHubService } = await import("./GitHubService-S2OGUTDR.js");
-      const { ClaudeContextManager } = await import("./ClaudeContextManager-6J2EB4QU.js");
-      const { ProjectCapabilityDetector } = await import("./ProjectCapabilityDetector-S5FLNCFI.js");
-      const { DefaultBranchNamingService } = await import("./BranchNamingService-B5PVRR7F.js");
+      const { GitHubService } = await import("./GitHubService-O7U4UQ7N.js");
+      const { ClaudeContextManager } = await import("./ClaudeContextManager-KE5TBZVZ.js");
+      const { ProjectCapabilityDetector } = await import("./ProjectCapabilityDetector-UZYW32SY.js");
+      const { DefaultBranchNamingService } = await import("./BranchNamingService-FLPUUFOB.js");
       this.loomManager = new LoomManager(
         this.gitWorktreeManager,
         new GitHubService(),
@@ -127,6 +127,10 @@ var CleanupCommand = class {
     const parsed = this.parseInput(input);
     this.validateInput(parsed);
     await this.checkForChildLooms(parsed);
+    if (input.options.defer) {
+      getLogger().info(`Waiting ${input.options.defer}ms before cleanup...`);
+      await new Promise((resolve) => globalThis.setTimeout(resolve, input.options.defer));
+    }
     getLogger().info(`Cleanup mode: ${parsed.mode}`);
     if (parsed.mode === "single") {
       return await this.executeSingleCleanup(parsed);
@@ -278,7 +282,7 @@ var CleanupCommand = class {
     const { force, dryRun } = parsed.options;
     let parsedInput = await this.identifierParser.parseForPatternDetection(identifier);
     if (parsedInput.type === "branch" && parsedInput.branchName) {
-      const { extractIssueNumber } = await import("./git-FVMGBHC2.js");
+      const { extractIssueNumber } = await import("./git-ENLT2VNI.js");
       const extractedNumber = extractIssueNumber(parsedInput.branchName);
       if (extractedNumber !== null) {
         parsedInput = {
@@ -477,4 +481,4 @@ var CleanupCommand = class {
 export {
   CleanupCommand
 };
-//# sourceMappingURL=cleanup-BRUAINKE.js.map
+//# sourceMappingURL=cleanup-ZPOMRSNN.js.map

package/dist/cleanup-ZPOMRSNN.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/commands/cleanup.ts"],"sourcesContent":["import { getLogger } from '../utils/logger-context.js'\nimport { GitWorktreeManager } from '../lib/GitWorktreeManager.js'\nimport { ResourceCleanup } from '../lib/ResourceCleanup.js'\nimport { ProcessManager } from '../lib/process/ProcessManager.js'\nimport { DatabaseManager } from '../lib/DatabaseManager.js'\nimport { EnvironmentManager } from '../lib/EnvironmentManager.js'\nimport { CLIIsolationManager } from '../lib/CLIIsolationManager.js'\nimport { SettingsManager } from '../lib/SettingsManager.js'\nimport { promptConfirmation } from '../utils/prompt.js'\nimport { IdentifierParser } from '../utils/IdentifierParser.js'\nimport { loadEnvIntoProcess } from '../utils/env.js'\nimport { createNeonProviderFromSettings } from '../utils/neon-helpers.js'\nimport { LoomManager } from '../lib/LoomManager.js'\nimport type { CleanupOptions } from '../types/index.js'\nimport type { CleanupResult } from '../types/cleanup.js'\nimport type { ParsedInput } from './start.js'\n\n/**\n * Input structure for CleanupCommand.execute()\n */\nexport interface CleanupCommandInput {\n  identifier?: string\n  options: CleanupOptions\n}\n\n/**\n * Parsed and validated cleanup command input\n * Mode determines which cleanup operation to perform\n */\nexport interface ParsedCleanupInput {\n  mode: 'list' | 'single' | 'issue' | 'all'\n  identifier?: string\n  issueNumber?: string | number\n  branchName?: string\n  originalInput?: string\n  options: CleanupOptions\n}\n\n/**\n * Manages cleanup command execution with option parsing and validation\n * Follows the command pattern established by StartCommand\n *\n * This implementation handles ONLY parsing, validation, and mode determination.\n * Actual cleanup operations are deferred to subsequent sub-issues.\n */\nexport class CleanupCommand {\n  private readonly gitWorktreeManager: GitWorktreeManager\n  private resourceCleanup?: ResourceCleanup\n  private loomManager?: import('../lib/LoomManager.js').LoomManager\n  private readonly identifierParser: IdentifierParser\n\n  constructor(\n    gitWorktreeManager?: GitWorktreeManager,\n    resourceCleanup?: ResourceCleanup\n  ) {\n    // Load environment variables first\n    const envResult = loadEnvIntoProcess()\n    if (envResult.error) {\n      getLogger().debug(`Environment loading warning: ${envResult.error.message}`)\n    }\n    if (envResult.parsed) {\n      getLogger().debug(`Loaded ${Object.keys(envResult.parsed).length} environment variables`)\n    }\n\n    this.gitWorktreeManager = gitWorktreeManager ?? new GitWorktreeManager()\n\n    // Initialize ResourceCleanup with DatabaseManager and CLIIsolationManager\n    // ResourceCleanup will be initialized lazily with proper configuration\n    if (resourceCleanup) {\n      this.resourceCleanup = resourceCleanup\n    }\n\n    // Initialize IdentifierParser for pattern-based detection\n    this.identifierParser = new IdentifierParser(this.gitWorktreeManager)\n  }\n\n  /**\n   * Lazy initialization of ResourceCleanup and LoomManager with properly configured DatabaseManager\n   */\n  private async ensureResourceCleanup(): Promise<void> {\n    if (this.resourceCleanup && this.loomManager) {\n      return\n    }\n\n    const settingsManager = new SettingsManager()\n    const settings = await settingsManager.loadSettings()\n    const databaseUrlEnvVarName = settings.capabilities?.database?.databaseUrlEnvVarName ?? 'DATABASE_URL'\n\n    const environmentManager = new EnvironmentManager()\n    const neonProvider = createNeonProviderFromSettings(settings)\n    const databaseManager = new DatabaseManager(neonProvider, environmentManager, databaseUrlEnvVarName)\n    const cliIsolationManager = new CLIIsolationManager()\n\n    this.resourceCleanup ??= new ResourceCleanup(\n      this.gitWorktreeManager,\n      new ProcessManager(),\n      databaseManager,\n      cliIsolationManager\n    )\n\n    // Initialize LoomManager if not provided (for child loom detection)\n    if (!this.loomManager) {\n      const { GitHubService } = await import('../lib/GitHubService.js')\n      const { ClaudeContextManager } = await import('../lib/ClaudeContextManager.js')\n      const { ProjectCapabilityDetector } = await import('../lib/ProjectCapabilityDetector.js')\n      const { DefaultBranchNamingService } = await import('../lib/BranchNamingService.js')\n\n      this.loomManager = new LoomManager(\n        this.gitWorktreeManager,\n        new GitHubService(),\n        new DefaultBranchNamingService({ useClaude: true }),\n        environmentManager,\n        new ClaudeContextManager(),\n        new ProjectCapabilityDetector(),\n        cliIsolationManager,\n        settingsManager,\n        databaseManager\n      )\n    }\n  }\n\n  /**\n   * Check for child looms and exit gracefully if any exist\n   * Always checks the TARGET loom (the one being cleaned up), not the current directory's loom\n   *\n   * @param parsed - The parsed input identifying the loom being cleaned up\n   */\n  private async checkForChildLooms(parsed: ParsedCleanupInput): Promise<void> {\n    await this.ensureResourceCleanup()\n    if (!this.loomManager) {\n      throw new Error('Failed to initialize LoomManager')\n    }\n\n    // Determine which branch is being cleaned up based on parsed input\n    let targetBranch: string | undefined\n\n    if (parsed.branchName) {\n      targetBranch = parsed.branchName\n    } else if (parsed.mode === 'issue' && parsed.issueNumber !== undefined) {\n      // For issues, try to find the worktree by issue number to get the branch name\n      const worktree = await this.gitWorktreeManager.findWorktreeForIssue(parsed.issueNumber)\n      targetBranch = worktree?.branch\n    }\n\n    // If we can't determine the target branch, skip the check\n    if (!targetBranch) {\n      getLogger().debug(`Cannot determine target branch for child loom check`)\n      return\n    }\n\n    // Check if the TARGET loom has any child looms\n    const hasChildLooms = await this.loomManager.checkAndWarnChildLooms(targetBranch)\n    if (hasChildLooms) {\n      throw new Error('Cannot cleanup loom while child looms exist. Please \\'finish\\' or \\'cleanup\\' child looms first.')\n    }\n  }\n\n  /**\n   * Main entry point for the cleanup command\n   * Parses input, validates options, and determines operation mode\n   */\n  public async execute(input: CleanupCommandInput): Promise<CleanupResult | void> {\n    // Step 1: Parse input and determine mode\n    const parsed = this.parseInput(input)\n\n    // Step 2: Validate option combinations (fail fast before any delay)\n    this.validateInput(parsed)\n\n    // Note: JSON mode auto-skips routine confirmations (programmatic use can't interact)\n    // Safety checks still require --force to bypass (ResourceCleanup.validateWorktreeSafety throws errors)\n\n    // Step 3: Check for child looms AFTER parsing input\n    // This ensures we only block when cleaning the CURRENT loom (parent), not a child\n    await this.checkForChildLooms(parsed)\n\n    // Step 4: Handle deferred execution (after all validation passes)\n    if (input.options.defer) {\n      getLogger().info(`Waiting ${input.options.defer}ms before cleanup...`)\n      await new Promise(resolve => globalThis.setTimeout(resolve, input.options.defer))\n    }\n\n    // Step 5: Execute based on mode\n    getLogger().info(`Cleanup mode: ${parsed.mode}`)\n\n    if (parsed.mode === 'single') {\n      return await this.executeSingleCleanup(parsed)\n    } else if (parsed.mode === 'list') {\n      getLogger().info('Would list all worktrees')  // TODO: Implement in Sub-issue #2\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'list',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'all') {\n      getLogger().info('Would remove all worktrees')  // TODO: Implement in Sub-issue #5\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'all',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'issue') {\n      return await this.executeIssueCleanup(parsed)\n    }\n  }\n\n  /**\n   * Parse input to determine cleanup mode and extract relevant data\n   * Implements auto-detection: numeric input = issue number, non-numeric = branch name\n   *\n   * @private\n   */\n  private parseInput(input: CleanupCommandInput): ParsedCleanupInput {\n    const { identifier, options } = input\n\n    // Trim identifier if present\n    const trimmedIdentifier = identifier?.trim() ?? undefined\n\n    // Mode: List (takes priority - it's informational only)\n    if (options.list) {\n      const result: ParsedCleanupInput = {\n        mode: 'list',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: All (remove everything)\n    if (options.all) {\n      const result: ParsedCleanupInput = {\n        mode: 'all',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      if (options.issue !== undefined) {\n        result.issueNumber = options.issue\n      }\n      return result\n    }\n\n    // Mode: Explicit issue number via --issue flag\n    if (options.issue !== undefined) {\n      // Need to determine if identifier is branch or numeric to set branchName\n      if (trimmedIdentifier) {\n        const numericPattern = /^[0-9]+$/\n        if (!numericPattern.test(trimmedIdentifier)) {\n          // Identifier is a branch name with explicit --issue flag\n          return {\n            mode: 'issue',\n            issueNumber: options.issue,\n            branchName: trimmedIdentifier,\n            identifier: trimmedIdentifier,\n            originalInput: trimmedIdentifier,\n            options\n          }\n        }\n      }\n      const result: ParsedCleanupInput = {\n        mode: 'issue',\n        issueNumber: options.issue,\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: Auto-detect from identifier\n    if (!trimmedIdentifier) {\n      throw new Error('Missing required argument: identifier. Use --all to remove all worktrees or --list to list them.')\n    }\n\n    // Auto-detection: Check if identifier is purely numeric\n    // Pattern from bash script line 364: ^[0-9]+$\n    const numericPattern = /^[0-9]+$/\n    if (numericPattern.test(trimmedIdentifier)) {\n      // Numeric input = issue number\n      return {\n        mode: 'issue',\n        issueNumber: parseInt(trimmedIdentifier, 10),\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    } else {\n      // Non-numeric = branch name\n      return {\n        mode: 'single',\n        branchName: trimmedIdentifier,\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    }\n  }\n\n  /**\n   * Validate parsed input for option conflicts\n   * Throws descriptive errors for invalid option combinations\n   *\n   * @private\n   */\n  private validateInput(parsed: ParsedCleanupInput): void {\n    const { mode, options, branchName } = parsed\n\n    // Conflict: --list is informational only, incompatible with destructive operations\n    if (mode === 'list') {\n      if (options.all) {\n        throw new Error('Cannot use --list with --all (list is informational only)')\n      }\n      if (options.issue !== undefined) {\n        throw new Error('Cannot use --list with --issue (list is informational only)')\n      }\n      if (parsed.identifier) {\n        throw new Error('Cannot use --list with a specific identifier (list shows all worktrees)')\n      }\n    }\n\n    // Conflict: --all removes everything, can't combine with specific identifier or --issue\n    if (mode === 'all') {\n      if (parsed.identifier) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n      if (parsed.issueNumber !== undefined) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n    }\n\n    // Conflict: explicit --issue flag with branch name identifier\n    // (This prevents confusion when user provides both)\n    if (options.issue !== undefined && branchName) {\n      throw new Error('Cannot use --issue flag with branch name identifier. Use numeric identifier or --issue flag alone.')\n    }\n\n    // Note: --force and --dry-run are compatible with all modes (no conflicts)\n  }\n\n  /**\n   * Execute cleanup for single worktree\n   * Implements two-stage confirmation: worktree removal, then branch deletion\n   * Uses IdentifierParser for pattern-based detection without GitHub API calls\n   */\n  private async executeSingleCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const identifier = parsed.branchName ?? parsed.identifier ?? ''\n    if (!identifier) {\n      throw new Error('No identifier found for cleanup')\n    }\n    const { force, dryRun } = parsed.options\n\n    // Step 1: Parse identifier using pattern-based detection\n    let parsedInput: ParsedInput = await this.identifierParser.parseForPatternDetection(identifier)\n\n    // If type is 'branch', try to extract issue number for CLI symlink cleanup\n    if (parsedInput.type === 'branch' && parsedInput.branchName) {\n      const { extractIssueNumber } = await import('../utils/git.js')\n      const extractedNumber = extractIssueNumber(parsedInput.branchName)\n      if (extractedNumber !== null) {\n        parsedInput = {\n          ...parsedInput,\n          number: extractedNumber  // Add number for CLI symlink cleanup\n        }\n      }\n    }\n\n    // Step 2: Display worktree details\n    getLogger().info(`Preparing to cleanup worktree: ${identifier}`)\n\n    // Step 3: Routine confirmation - worktree removal\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmWorktree = await promptConfirmation('Remove this worktree?', true)\n      if (!confirmWorktree) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier,\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 4: Execute worktree cleanup (includes safety validation)\n    // Issue #275 fix: Run 5-point safety check BEFORE any deletion\n    // This prevents the scenario where worktree is deleted but branch deletion fails\n    await this.ensureResourceCleanup()\n    if (!this.resourceCleanup) {\n      throw new Error('Failed to initialize ResourceCleanup')\n    }\n    const cleanupResult = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n      dryRun: dryRun ?? false,\n      force: force ?? false,\n      deleteBranch: true,  // Always include branch deletion (safety checks run first)\n      keepDatabase: false,\n      checkMergeSafety: true  // Run 5-point safety check BEFORE any deletion\n    })\n\n    // Add dryRun flag to result\n    cleanupResult.dryRun = dryRun ?? false\n\n    // Step 5: Report cleanup results\n    this.reportCleanupResults(cleanupResult)\n\n    // Final success message\n    if (cleanupResult.success) {\n      getLogger().success('Cleanup completed successfully')\n    } else {\n      getLogger().warn('Cleanup completed with errors - see details above')\n    }\n\n    return cleanupResult\n  }\n\n  /**\n   * Report cleanup operation results to user\n   */\n  private reportCleanupResults(result: CleanupResult): void {\n    getLogger().info('Cleanup operations:')\n\n    result.operations.forEach(op => {\n      const status = op.success ? '✓' : '✗'\n      const message = op.error ? `${op.message}: ${op.error}` : op.message\n\n      if (op.success) {\n        getLogger().info(`  ${status} ${message}`)\n      } else {\n        getLogger().error(`  ${status} ${message}`)\n      }\n    })\n\n    if (result.errors.length > 0) {\n      getLogger().warn(`${result.errors.length} error(s) occurred during cleanup`)\n    }\n  }\n\n  /**\n   * Execute cleanup for all worktrees associated with an issue or PR number\n   * Searches for worktrees by their path patterns (e.g., issue-25, pr-25, 25-feature, _pr_25)\n   * Implements bash cleanup-worktree.sh remove_worktrees_by_issue() (lines 157-242)\n   */\n  private async executeIssueCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const issueNumber = parsed.issueNumber\n    if (issueNumber === undefined) {\n      throw new Error('No issue/PR number provided for cleanup')\n    }\n\n    const { force, dryRun } = parsed.options\n\n    getLogger().info(`Finding worktrees related to GitHub issue/PR #${issueNumber}...`)\n\n    // Step 1: Get all worktrees and filter by path pattern\n    const worktrees = await this.gitWorktreeManager.listWorktrees()\n    const matchingWorktrees = worktrees.filter(wt => {\n      const path = wt.path.toLowerCase()\n      // Lowercase for case-insensitive matching (Linear IDs are uppercase like MARK-1)\n      const idStr = String(issueNumber).toLowerCase()\n\n      // Check if path contains the identifier with proper word boundaries\n      // Matches: issue-25, pr-25, 25-feature, _pr_25, issue-mark-1, etc.\n      // Uses word boundary or common separators (-, _, /) for alphanumeric IDs\n      const pattern = new RegExp(`(?:^|[/_-])${idStr}(?:[/_-]|$)`)\n      return pattern.test(path)\n    })\n\n    if (matchingWorktrees.length === 0) {\n      getLogger().warn(`No worktrees found for GitHub issue/PR #${issueNumber}`)\n      getLogger().info(`Searched for worktree paths containing: ${issueNumber}, _pr_${issueNumber}, issue-${issueNumber}, etc.`)\n      return {\n        identifier: String(issueNumber),\n        success: true,\n        dryRun: dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    }\n\n    // Step 2: Build targets list from matching worktrees\n    const targets: Array<{ branchName: string; hasWorktree: boolean; worktreePath?: string }> =\n      matchingWorktrees.map(wt => ({\n        branchName: wt.branch,\n        hasWorktree: true,\n        worktreePath: wt.path\n      }))\n\n    // Step 3: Display preview\n    getLogger().info(`Found ${targets.length} worktree(s) related to issue/PR #${issueNumber}:`)\n    for (const target of targets) {\n      getLogger().info(`  Branch: ${target.branchName} (${target.worktreePath})`)\n    }\n\n    // Step 4: Routine batch confirmation\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks per-worktree (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmCleanup = await promptConfirmation(\n        `Remove ${targets.length} worktree(s)?`,\n        true\n      )\n      if (!confirmCleanup) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier: String(issueNumber),\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 5: Process each target sequentially\n    let worktreesRemoved = 0\n    let branchesDeleted = 0\n    const databaseBranchesDeletedList: string[] = []\n    let failed = 0\n\n    for (const target of targets) {\n      getLogger().info(`Processing worktree: ${target.branchName}`)\n\n      // Cleanup worktree using ResourceCleanup with ParsedInput\n      // Now includes branch deletion with 5-point safety check BEFORE any deletion\n      try {\n        // Use the known issue number directly instead of parsing from branch name\n        // This ensures CLI symlinks (created with issue number) are properly cleaned up\n        const parsedInput: ParsedInput = {\n          type: 'issue',\n          number: issueNumber,  // Use the known issue number, not parsed from branch\n          branchName: target.branchName,\n          originalInput: String(issueNumber)\n        }\n\n        await this.ensureResourceCleanup()\n        if (!this.resourceCleanup) {\n          throw new Error('Failed to initialize ResourceCleanup')\n        }\n        // Issue #275 fix: Run safety checks BEFORE deleting worktree\n        // This prevents the scenario where worktree is deleted but branch deletion fails\n        const result = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n          dryRun: dryRun ?? false,\n          force: force ?? false,\n          deleteBranch: true,  // Include branch deletion (with safety checks)\n          keepDatabase: false,\n          checkMergeSafety: true  // Run 5-point safety check BEFORE any deletion\n        })\n\n        if (result.success) {\n          worktreesRemoved++\n          getLogger().success(`  Worktree removed: ${target.branchName}`)\n\n          // Check if branch was deleted\n          const branchOperation = result.operations.find(op => op.type === 'branch')\n          if (branchOperation?.success) {\n            branchesDeleted++\n            getLogger().success(`  Branch deleted: ${target.branchName}`)\n          }\n\n          // Check if database branch was actually deleted (use explicit deleted field)\n          const dbOperation = result.operations.find(op => op.type === 'database')\n          if (dbOperation?.deleted) {\n            // Get branch name from result or use the target branch name\n            const deletedBranchName = target.branchName\n            databaseBranchesDeletedList.push(deletedBranchName)\n          }\n        } else {\n          failed++\n          getLogger().error(`  Failed to remove worktree: ${target.branchName}`)\n        }\n      } catch (error) {\n        failed++\n        const errMsg = error instanceof Error ? error.message : 'Unknown error'\n        getLogger().error(`  Failed to cleanup: ${errMsg}`)\n        continue // Continue with next worktree even if this one failed\n      }\n    }\n\n    // Step 7: Report statistics\n    getLogger().success(`Completed cleanup for issue/PR #${issueNumber}:`)\n    getLogger().info(`   Worktrees removed: ${worktreesRemoved}`)\n    getLogger().info(`   Branches deleted: ${branchesDeleted}`)\n    if (databaseBranchesDeletedList.length > 0) {\n      // Display branch names in the format requested\n      getLogger().info(`   Database branches deleted: ${databaseBranchesDeletedList.join(', ')}`)\n    }\n    if (failed > 0) {\n      getLogger().warn(`   Failed operations: ${failed}`)\n    }\n\n    // Return aggregated result\n    return {\n      identifier: String(issueNumber),\n      success: failed === 0,\n      dryRun: dryRun ?? false,\n      operations: [\n        { type: 'worktree' as const, success: true, message: `Removed ${worktreesRemoved} worktree(s)` },\n        { type: 'branch' as const, success: true, message: `Deleted ${branchesDeleted} branch(es)` },\n        ...(databaseBranchesDeletedList.length > 0 ? [{ type: 'database' as const, success: true, message: `Deleted ${databaseBranchesDeletedList.length} database branch(es)`, deleted: true }] : []),\n      ],\n      errors: [],\n      rollbackRequired: false,\n    }\n  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