@iloom/cli 0.5.2 → 0.5.4

package/dist/{init-CMIRHFSR.js → init-4ZR2XXZA.js}

@@ -1,12 +1,13 @@
 #!/usr/bin/env node
 import {
   InitCommand
-} from "./chunk-VV66DH6T.js";
+} from "./chunk-ZXWTOJXA.js";
+import "./chunk-NKRQNER7.js";
 import "./chunk-F2PWIRV4.js";
-import "./chunk-HMMO2LDS.js";
+import "./chunk-ESP2FF52.js";
 import "./chunk-FXDYIV3K.js";
 import "./chunk-K5G5SFWY.js";
-import "./chunk-53OMUNUN.js";
+import "./chunk-TKL7RBEF.js";
 import "./chunk-IDUICCZY.js";
 import "./chunk-CFUWQHCJ.js";
 import "./chunk-ZX3GTM7O.js";
@@ -16,4 +17,4 @@ import "./chunk-VT4PDUYT.js";
 export {
   InitCommand
 };
-//# sourceMappingURL=init-CMIRHFSR.js.map
+//# sourceMappingURL=init-4ZR2XXZA.js.map

package/dist/{open-AXE225Z5.js → open-6HBQHPUL.js}

@@ -8,14 +8,14 @@ import {
 } from "./chunk-VU3QMIP2.js";
 import {
   IdentifierParser
-} from "./chunk-YU5HVI6B.js";
+} from "./chunk-YPOG7WY4.js";
 import {
   ProjectCapabilityDetector
 } from "./chunk-EBISESAP.js";
 import "./chunk-2ZPFJQ3B.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
+} from "./chunk-ESP2FF52.js";
 import {
   openBrowser
 } from "./chunk-YETJNRQM.js";
@@ -24,7 +24,7 @@ import {
 } from "./chunk-GYCR2LOU.js";
 import {
   extractIssueNumber
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -288,4 +288,4 @@ Make sure the project is built (run 'il start' first)`
 export {
   OpenCommand
 };
-//# sourceMappingURL=open-AXE225Z5.js.map
+//# sourceMappingURL=open-6HBQHPUL.js.map

package/dist/{projects-GVEMCN5R.js → projects-SA76I4TZ.js}

@@ -38,7 +38,7 @@ var ProjectsCommand = class {
           const marker = JSON.parse(content);
           if (!marker.projectPath || !marker.projectName) continue;
           if (!await fs.pathExists(marker.projectPath)) continue;
-          const activeLooms = this.countActiveLooms(marker.projectPath, allMetadata);
+          const activeLooms = await this.countActiveLooms(marker.projectPath, allMetadata);
           results.push({
             configuredAt: marker.configuredAt,
             projectPath: marker.projectPath,
@@ -58,16 +58,23 @@ var ProjectsCommand = class {
    * Count active looms for a project
    * Looms are counted if their worktreePath is in the project's -looms directory
    * or if they share the same parent directory as the project.
+   * Only counts looms where the worktree is a valid git worktree (.git exists).
    */
-  countActiveLooms(projectPath, allMetadata) {
-    return allMetadata.filter((meta) => {
-      if (!meta.worktreePath) return false;
+  async countActiveLooms(projectPath, allMetadata) {
+    let count = 0;
+    for (const meta of allMetadata) {
+      if (!meta.worktreePath) continue;
       const parentDir = path.dirname(meta.worktreePath);
-      return parentDir === path.dirname(projectPath) || parentDir.startsWith(projectPath + "-looms");
-    }).length;
+      const isProjectLoom = parentDir === path.dirname(projectPath) || parentDir.startsWith(projectPath + "-looms");
+      const isValidWorktree = await fs.pathExists(path.join(meta.worktreePath, ".git"));
+      if (isProjectLoom && isValidWorktree) {
+        count++;
+      }
+    }
+    return count;
   }
 };
 export {
   ProjectsCommand
 };
-//# sourceMappingURL=projects-GVEMCN5R.js.map
+//# sourceMappingURL=projects-SA76I4TZ.js.map

package/dist/projects-SA76I4TZ.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/commands/projects.ts"],"sourcesContent":["import path from 'path'\nimport os from 'os'\nimport fs from 'fs-extra'\nimport { getLogger } from '../utils/logger-context.js'\nimport { MetadataManager, type LoomMetadata } from '../lib/MetadataManager.js'\n\n/**\n * Project marker file structure (from FirstRunManager)\n */\ninterface ProjectMarker {\n  configuredAt: string\n  projectPath: string\n  projectName: string\n}\n\n/**\n * Output schema for project\n */\nexport interface ProjectOutput {\n  configuredAt: string\n  projectPath: string\n  projectName: string\n  activeLooms: number\n}\n\n/**\n * ProjectsCommand: List configured iloom projects\n *\n * Returns JSON array of configured projects from ~/.config/iloom-ai/projects/\n * Only includes projects where the directory still exists.\n * Each project includes an activeLooms count.\n */\nexport class ProjectsCommand {\n  private readonly projectsDir: string\n  private readonly metadataManager: MetadataManager\n\n  constructor(metadataManager?: MetadataManager) {\n    this.projectsDir = path.join(os.homedir(), '.config', 'iloom-ai', 'projects')\n    this.metadataManager = metadataManager ?? new MetadataManager()\n  }\n\n  /**\n   * Execute the projects command\n   * @param _options - Options object (json flag accepted but ignored - always returns JSON)\n   * @returns Array of project outputs\n   */\n  async execute(_options?: { json?: boolean }): Promise<ProjectOutput[]> {\n    // Options.json is accepted but ignored - always returns structured data\n    const results: ProjectOutput[] = []\n    const logger = getLogger()\n\n    try {\n      // Check if projects directory exists\n      if (!(await fs.pathExists(this.projectsDir))) {\n        return results\n      }\n\n      // Read all files in projects directory\n      const files = await fs.readdir(this.projectsDir)\n\n      // Get all loom metadata for active looms lookup\n      const allMetadata = await this.metadataManager.listAllMetadata()\n\n      for (const file of files) {\n        // Skip hidden files (like .DS_Store)\n        if (file.startsWith('.')) continue\n\n        try {\n          const filePath = path.join(this.projectsDir, file)\n          const content = await fs.readFile(filePath, 'utf8')\n          const marker: ProjectMarker = JSON.parse(content)\n\n          // Skip if required fields missing\n          if (!marker.projectPath || !marker.projectName) continue\n\n          // Filter: only include if directory exists\n          if (!(await fs.pathExists(marker.projectPath))) continue\n\n          // Count active looms for this project\n          const activeLooms = await this.countActiveLooms(marker.projectPath, allMetadata)\n\n          results.push({\n            configuredAt: marker.configuredAt,\n            projectPath: marker.projectPath,\n            projectName: marker.projectName,\n            activeLooms,\n          })\n        } catch {\n          // Skip invalid files (graceful degradation)\n          logger.debug(`Skipping invalid project file: ${file}`)\n        }\n      }\n    } catch (error) {\n      // Graceful degradation on read errors\n      logger.debug(`Failed to list projects: ${error instanceof Error ? error.message : 'Unknown'}`)\n    }\n\n    return results\n  }\n\n  /**\n   * Count active looms for a project\n   * Looms are counted if their worktreePath is in the project's -looms directory\n   * or if they share the same parent directory as the project.\n   * Only counts looms where the worktree is a valid git worktree (.git exists).\n   */\n  private async countActiveLooms(projectPath: string, allMetadata: LoomMetadata[]): Promise<number> {\n    let count = 0\n    for (const meta of allMetadata) {\n      if (!meta.worktreePath) continue\n      const parentDir = path.dirname(meta.worktreePath)\n      const isProjectLoom =\n        parentDir === path.dirname(projectPath) ||\n        parentDir.startsWith(projectPath + '-looms')\n      // Check for .git (file for worktrees, directory for main repo) to verify it's a valid git worktree\n      const isValidWorktree = await fs.pathExists(path.join(meta.worktreePath, '.git'))\n      if (isProjectLoom && isValidWorktree) {\n        count++\n      }\n    }\n    return count\n  }\n}\n"],"mappings":";;;;;;;;;;AAAA,OAAO,UAAU;AACjB,OAAO,QAAQ;AACf,OAAO,QAAQ;AA8BR,IAAM,kBAAN,MAAsB;AAAA,EAI3B,YAAY,iBAAmC;AAC7C,SAAK,cAAc,KAAK,KAAK,GAAG,QAAQ,GAAG,WAAW,YAAY,UAAU;AAC5E,SAAK,kBAAkB,mBAAmB,IAAI,gBAAgB;AAAA,EAChE;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,EAOA,MAAM,QAAQ,UAAyD;AAErE,UAAM,UAA2B,CAAC;AAClC,UAAM,SAAS,UAAU;AAEzB,QAAI;AAEF,UAAI,CAAE,MAAM,GAAG,WAAW,KAAK,WAAW,GAAI;AAC5C,eAAO;AAAA,MACT;AAGA,YAAM,QAAQ,MAAM,GAAG,QAAQ,KAAK,WAAW;AAG/C,YAAM,cAAc,MAAM,KAAK,gBAAgB,gBAAgB;AAE/D,iBAAW,QAAQ,OAAO;AAExB,YAAI,KAAK,WAAW,GAAG,EAAG;AAE1B,YAAI;AACF,gBAAM,WAAW,KAAK,KAAK,KAAK,aAAa,IAAI;AACjD,gBAAM,UAAU,MAAM,GAAG,SAAS,UAAU,MAAM;AAClD,gBAAM,SAAwB,KAAK,MAAM,OAAO;AAGhD,cAAI,CAAC,OAAO,eAAe,CAAC,OAAO,YAAa;AAGhD,cAAI,CAAE,MAAM,GAAG,WAAW,OAAO,WAAW,EAAI;AAGhD,gBAAM,cAAc,MAAM,KAAK,iBAAiB,OAAO,aAAa,WAAW;AAE/E,kBAAQ,KAAK;AAAA,YACX,cAAc,OAAO;AAAA,YACrB,aAAa,OAAO;AAAA,YACpB,aAAa,OAAO;AAAA,YACpB;AAAA,UACF,CAAC;AAAA,QACH,QAAQ;AAEN,iBAAO,MAAM,kCAAkC,IAAI,EAAE;AAAA,QACvD;AAAA,MACF;AAAA,IACF,SAAS,OAAO;AAEd,aAAO,MAAM,4BAA4B,iBAAiB,QAAQ,MAAM,UAAU,SAAS,EAAE;AAAA,IAC/F;AAEA,WAAO;AAAA,EACT;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,EAQA,MAAc,iBAAiB,aAAqB,aAA8C;AAChG,QAAI,QAAQ;AACZ,eAAW,QAAQ,aAAa;AAC9B,UAAI,CAAC,KAAK,aAAc;AACxB,YAAM,YAAY,KAAK,QAAQ,KAAK,YAAY;AAChD,YAAM,gBACJ,cAAc,KAAK,QAAQ,WAAW,KACtC,UAAU,WAAW,cAAc,QAAQ;AAE7C,YAAM,kBAAkB,MAAM,GAAG,WAAW,KAAK,KAAK,KAAK,cAAc,MAAM,CAAC;AAChF,UAAI,iBAAiB,iBAAiB;AACpC;AAAA,MACF;AAAA,IACF;AACA,WAAO;AAAA,EACT;AACF;","names":[]}

package/dist/prompts/issue-prompt.txt

@@ -267,7 +267,8 @@ Perform ONE comprehensive scan to determine which agents need to run:
 
 Only execute if workflow plan determined NEEDS_ENHANCEMENT:
 1. Execute: @agent-iloom-issue-enhancer ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
 2. Upon completion: Extract issue+comment link (including comment ID) from agent output and provide link to issue comment
 {{#IF INTERACTIVE_MODE}}
 2.5. Extract and validate assumptions (batched validation):
@@ -317,7 +318,8 @@ If workflow plan determined SKIP_ENHANCEMENT:
 
 Only execute if workflow plan determined NEEDS_COMPLEXITY_EVAL:
 1. Execute: @agent-iloom-issue-complexity-evaluator ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
 2. Upon completion: Extract issue+comment link from agent output and provide link to issue comment (including comment ID)
 {{#IF INTERACTIVE_MODE}}
 2.5. Extract and validate assumptions (batched validation):
@@ -384,7 +386,8 @@ If workflow plan determined SKIP_COMPLEXITY_EVAL:
 
 Only execute if workflow plan determined NEEDS_ANALYSIS AND complexity is COMPLEX:
 1. Execute: @agent-iloom-issue-analyzer ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
 2. Upon completion: Extract issue+comment link from agent output and provide link to issue comment (including comment ID)
    - Use `recap.add_entry` to log significant technical findings (type: "insight" for dependencies/constraints, type: "risk" for problems identified)
 {{#IF INTERACTIVE_MODE}}
@@ -462,7 +465,8 @@ After STEP 1.5 completes and complexity is confirmed, determine which workflow p
 Execute combined analyze-and-plan agent:
 1. Display: "Executing combined analyze-and-plan agent for SIMPLE task..."
 2. Execute: @agent-iloom-issue-analyze-and-plan ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
 3. Upon completion: Extract issue+comment link from agent output and provide link to issue comment (including comment ID)
    - Use `recap.add_entry` to log key technical discoveries (type: "insight") and design decisions (type: "decision")
 {{#IF INTERACTIVE_MODE}}
@@ -502,7 +506,8 @@ Execute combined analyze-and-plan agent:
 
 Only execute if workflow plan determined NEEDS_PLANNING AND complexity is COMPLEX:
 1. Execute: @agent-iloom-issue-planner ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
 2. Upon completion: Extract issue+comment link from agent output and provide link to issue comment (including comment ID)
    - Use `recap.add_entry` to log key architectural decisions (e.g., type: "decision", content: "Chose approach A over B due to X constraint")
 {{#IF INTERACTIVE_MODE}}
@@ -548,7 +553,8 @@ Only execute if workflow plan determined NEEDS_IMPLEMENTATION:
    - Extract the comment ID from the issue comment URL that was provided
    - The comment ID is the numeric value after "#issuecomment-" in the URL (e.g., https://github.com/org/repo/issues/123#issuecomment-456789 has comment ID 456789)
 2. Execute: @agent-iloom-issue-implementer ISSUE_NUMBER with the following instructions about assumptions:
-   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers. Document any assumptions clearly in question tables with your own answers.
+   - Before making assumptions, scan ALL issue comments for previously asked questions and their answers.
+   - When creating question tables in your issue comments, fill in your own assumed answers to each question. This documents assumptions made during execution.
    Additional critical instructions:
    - **CRITICAL**: The implementation plan in the issue comments contains exact file paths and line numbers. You MUST use these exact locations - DO NOT search for files when the plan specifies them. Extract file locations from the plan in Step 1.5 before implementing.
    - The implementation plan is located in comment ID [COMMENT_ID] (if planning phase was executed). Read this comment first in Step 1.5 to extract file specifications.

package/dist/{rebase-6UIHMUWS.js → rebase-SRBOVC4M.js}

@@ -1,14 +1,14 @@
 #!/usr/bin/env node
 import {
   MergeManager
-} from "./chunk-XNNXAAZT.js";
+} from "./chunk-E4F7KASE.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
+} from "./chunk-ESP2FF52.js";
 import {
   getWorktreeRoot,
   isValidGitRepo
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -94,4 +94,4 @@ export {
   RebaseCommand,
   WorktreeValidationError
 };
-//# sourceMappingURL=rebase-6UIHMUWS.js.map
+//# sourceMappingURL=rebase-SRBOVC4M.js.map

package/dist/{recap-XTBNMEMO.js → recap-X7FTTKPP.js}

@@ -4,11 +4,11 @@ import {
 } from "./chunk-NXMDEL3F.js";
 import {
   IdentifierParser
-} from "./chunk-YU5HVI6B.js";
+} from "./chunk-YPOG7WY4.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
-import "./chunk-53OMUNUN.js";
+} from "./chunk-ESP2FF52.js";
+import "./chunk-TKL7RBEF.js";
 import "./chunk-IDUICCZY.js";
 import "./chunk-CFUWQHCJ.js";
 import "./chunk-6MLEBAYZ.js";
@@ -107,4 +107,4 @@ var RecapCommand = class {
 export {
   RecapCommand
 };
-//# sourceMappingURL=recap-XTBNMEMO.js.map
+//# sourceMappingURL=recap-X7FTTKPP.js.map

package/dist/{run-H375EYRB.js → run-5FU76FFE.js}

@@ -8,14 +8,14 @@ import {
 } from "./chunk-VU3QMIP2.js";
 import {
   IdentifierParser
-} from "./chunk-YU5HVI6B.js";
+} from "./chunk-YPOG7WY4.js";
 import {
   ProjectCapabilityDetector
 } from "./chunk-EBISESAP.js";
 import "./chunk-2ZPFJQ3B.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
+} from "./chunk-ESP2FF52.js";
 import {
   openBrowser
 } from "./chunk-YETJNRQM.js";
@@ -24,7 +24,7 @@ import {
 } from "./chunk-GYCR2LOU.js";
 import {
   extractIssueNumber
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -288,4 +288,4 @@ Make sure the project is built (run 'il start' first)`
 export {
   RunCommand
 };
-//# sourceMappingURL=run-H375EYRB.js.map
+//# sourceMappingURL=run-5FU76FFE.js.map

package/dist/{shell-33FJCWJQ.js → shell-UQJDI36V.js}

@@ -1,13 +1,13 @@
 #!/usr/bin/env node
 import {
   IdentifierParser
-} from "./chunk-YU5HVI6B.js";
+} from "./chunk-YPOG7WY4.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
+} from "./chunk-ESP2FF52.js";
 import {
   extractIssueNumber
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -235,4 +235,4 @@ var ShellCommand = class {
 export {
   ShellCommand
 };
-//# sourceMappingURL=shell-33FJCWJQ.js.map
+//# sourceMappingURL=shell-UQJDI36V.js.map

package/dist/{summary-JUMOCNLR.js → summary-MOKN7RM2.js}

@@ -6,12 +6,12 @@ import "./chunk-NXMDEL3F.js";
 import "./chunk-7Q66W4OH.js";
 import {
   GitWorktreeManager
-} from "./chunk-HMMO2LDS.js";
+} from "./chunk-ESP2FF52.js";
 import "./chunk-FXDYIV3K.js";
 import "./chunk-K5G5SFWY.js";
 import {
   extractIssueNumber
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import "./chunk-IDUICCZY.js";
 import {
   MetadataManager
@@ -248,4 +248,4 @@ Please provide an issue number, PR number, or branch name.`
 export {
   SummaryCommand
 };
-//# sourceMappingURL=summary-JUMOCNLR.js.map
+//# sourceMappingURL=summary-MOKN7RM2.js.map

package/dist/{test-git-CO3BA4BV.js → test-git-GB3B6QNT.js}

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import {
   findMainWorktreePath
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -51,4 +51,4 @@ var TestGitCommand = class {
 export {
   TestGitCommand
 };
-//# sourceMappingURL=test-git-CO3BA4BV.js.map
+//# sourceMappingURL=test-git-GB3B6QNT.js.map

package/dist/{test-prefix-HZYSDQYT.js → test-prefix-YQNNTCY3.js}

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import {
   generateWorktreePath
-} from "./chunk-53OMUNUN.js";
+} from "./chunk-TKL7RBEF.js";
 import {
   SettingsManager
 } from "./chunk-IDUICCZY.js";
@@ -67,4 +67,4 @@ var TestPrefixCommand = class {
 export {
   TestPrefixCommand
 };
-//# sourceMappingURL=test-prefix-HZYSDQYT.js.map
+//# sourceMappingURL=test-prefix-YQNNTCY3.js.map

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@iloom/cli",
-  "version": "0.5.2",
+  "version": "0.5.4",
   "description": "Control plane for maintaining alignment between you and Claude Code as you work across multiple issues using isolated environments, visible context, and multi-agent workflows to scale understanding, not just output",
   "keywords": [
     "ai",

package/dist/chunk-53OMUNUN.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/utils/git.ts"],"sourcesContent":["import path from 'path'\nimport { execa, type ExecaError } from 'execa'\nimport { type GitWorktree } from '../types/worktree.js'\nimport { SettingsManager, type SettingsManager as SettingsManagerType } from '../lib/SettingsManager.js'\nimport { MetadataManager } from '../lib/MetadataManager.js'\nimport { logger } from './logger.js'\n\n/**\n * Execute a Git command and return the stdout result\n * Throws an error if the command fails\n */\nexport async function executeGitCommand(\n  args: string[],\n  options?: { cwd?: string; timeout?: number; stdio?: 'inherit' | 'pipe'; env?: NodeJS.ProcessEnv }\n): Promise<string> {\n  try {\n    const result = await execa('git', args, {\n      cwd: options?.cwd ?? process.cwd(),\n      timeout: options?.timeout ?? 30000,\n      encoding: 'utf8',\n      stdio: options?.stdio ?? 'pipe',\n      verbose: logger.isDebugEnabled(),\n      // Spread env conditionally - only include if defined\n      ...(options?.env && { env: options.env }),\n    })\n\n    return result.stdout\n  } catch (error) {\n    const execaError = error as ExecaError\n    const stderr = execaError.stderr ?? execaError.message ?? 'Unknown Git error'\n    throw new Error(`Git command failed: ${stderr}`)\n  }\n}\n\n/**\n * Parse git worktree list output into structured data\n * @param output - The output from git worktree list --porcelain\n * @param defaultBranch - Default branch name to use for bare repositories (defaults to 'main')\n */\nexport function parseWorktreeList(output: string, defaultBranch?: string): GitWorktree[] {\n  const worktrees: GitWorktree[] = []\n  const lines = output.trim().split('\\n')\n\n  let i = 0\n  while (i < lines.length) {\n    const pathLine = lines[i]\n    if (!pathLine?.startsWith('worktree ')) {\n      i++\n      continue\n    }\n\n    // Parse path line: \"worktree /path/to/worktree\"\n    const pathMatch = pathLine.match(/^worktree (.+)$/)\n    if (!pathMatch) {\n      i++\n      continue\n    }\n\n    let branch = ''\n    let commit = ''\n    let detached = false\n    let bare = false\n    let locked = false\n    let lockReason: string | undefined\n\n    // Process subsequent lines for this worktree\n    i++\n    while (i < lines.length && !lines[i]?.startsWith('worktree ')) {\n      const line = lines[i]?.trim()\n      if (!line) {\n        i++\n        continue\n      }\n\n      if (line === 'bare') {\n        bare = true\n        branch = defaultBranch ?? 'main' // Default assumption for bare repo\n      } else if (line === 'detached') {\n        detached = true\n        branch = 'HEAD'\n      } else if (line.startsWith('locked')) {\n        locked = true\n        const lockMatch = line.match(/^locked (.+)$/)\n        lockReason = lockMatch?.[1]\n        branch = branch || 'unknown'\n      } else if (line.startsWith('HEAD ')) {\n        // Parse commit line: \"HEAD abc123def456...\"\n        const commitMatch = line.match(/^HEAD ([a-f0-9]+)/)\n        if (commitMatch) {\n          commit = commitMatch[1] ?? ''\n        }\n      } else if (line.startsWith('branch ')) {\n        // Parse branch line: \"branch refs/heads/feature-branch\"\n        const branchMatch = line.match(/^branch refs\\/heads\\/(.+)$/)\n        branch = branchMatch?.[1] ?? line.replace('branch ', '')\n      }\n\n      i++\n    }\n\n    const worktree: GitWorktree = {\n      path: pathMatch[1] ?? '',\n      branch,\n      commit,\n      bare,\n      detached,\n      locked,\n    }\n\n    if (lockReason !== undefined) {\n      worktree.lockReason = lockReason\n    }\n\n    worktrees.push(worktree)\n  }\n\n  return worktrees\n}\n\n/**\n * Check if a branch name follows PR naming patterns\n */\nexport function isPRBranch(branchName: string): boolean {\n  const prPatterns = [\n    /^pr\\/\\d+/i, // pr/123, pr/123-feature-name\n    /^pull\\/\\d+/i, // pull/123\n    /^\\d+[-_]/, // 123-feature-name, 123_feature_name\n    /^feature\\/pr[-_]?\\d+/i, // feature/pr123, feature/pr-123\n    /^hotfix\\/pr[-_]?\\d+/i, // hotfix/pr123\n  ]\n\n  return prPatterns.some(pattern => pattern.test(branchName))\n}\n\n/**\n * Extract PR number from branch name\n */\nexport function extractPRNumber(branchName: string): number | null {\n  const patterns = [\n    /^pr\\/(\\d+)/i, // pr/123\n    /^pull\\/(\\d+)/i, // pull/123\n    /^(\\d+)[-_]/, // 123-feature-name\n    /^feature\\/pr[-_]?(\\d+)/i, // feature/pr123\n    /^hotfix\\/pr[-_]?(\\d+)/i, // hotfix/pr123\n    /pr[-_]?(\\d+)/i, // anywhere with pr123 or pr-123\n  ]\n\n  for (const pattern of patterns) {\n    const match = branchName.match(pattern)\n    if (match?.[1]) {\n      const num = parseInt(match[1], 10)\n      if (!isNaN(num)) return num\n    }\n  }\n\n  return null\n}\n\n/**\n * Extract issue number from branch name\n * Supports both new format (issue-{issueId}__{slug}) and old format (issue-{number}-{slug})\n * @returns string issue ID (alphanumeric) or null if not found\n */\nexport function extractIssueNumber(branchName: string): string | null {\n  // Priority 1: New format - issue-{issueId}__ (alphanumeric ID with double underscore)\n  const newFormatPattern = /issue-([^_]+)__/i\n  const newMatch = branchName.match(newFormatPattern)\n  if (newMatch?.[1]) return newMatch[1]\n\n  // Priority 2: Old format - issue-{number}- or issue-{number}$ (numeric only, dash or end)\n  const oldFormatPattern = /issue-(\\d+)(?:-|$)/i\n  const oldMatch = branchName.match(oldFormatPattern)\n  if (oldMatch?.[1]) return oldMatch[1]\n\n  // Priority 3: Alphanumeric ID at end (either format without description)\n  const alphanumericEndPattern = /issue-([^_\\s/]+)$/i\n  const alphanumericMatch = branchName.match(alphanumericEndPattern)\n  if (alphanumericMatch?.[1]) return alphanumericMatch[1]\n\n  // Priority 4: Legacy patterns (issue_N, leading number)\n  const legacyPatterns = [\n    /issue_(\\d+)/i,     // issue_42\n    /^(\\d+)-/,          // 42-feature-name\n  ]\n  for (const pattern of legacyPatterns) {\n    const match = branchName.match(pattern)\n    if (match?.[1]) return match[1]\n  }\n\n  return null\n}\n\n/**\n * Check if a path follows worktree naming patterns\n */\nexport function isWorktreePath(path: string): boolean {\n  const worktreePatterns = [\n    /\\/worktrees?\\//i, // Contains /worktree/ or /worktrees/\n    /\\/workspace[-_]?\\d+/i, // workspace123, workspace-123\n    /\\/issue[-_]?\\d+/i, // issue123, issue-123\n    /\\/pr[-_]?\\d+/i, // pr123, pr-123\n    /-worktree$/i, // ends with -worktree\n    /\\.worktree$/i, // ends with .worktree\n  ]\n\n  return worktreePatterns.some(pattern => pattern.test(path))\n}\n\n/**\n * Generate a worktree path based on branch name and root directory\n * For PRs, adds _pr_<PR_NUM> suffix to distinguish from issue branches\n */\nexport function generateWorktreePath(\n  branchName: string,\n  rootDir: string = process.cwd(),\n  options?: { isPR?: boolean; prNumber?: number; prefix?: string }\n): string {\n  // Replace slashes with dashes (matches bash line 593)\n  let sanitized = branchName.replace(/\\//g, '-')\n\n  // Add PR suffix if this is a PR (matches bash lines 595-597)\n  if (options?.isPR && options?.prNumber) {\n    sanitized = `${sanitized}_pr_${options.prNumber}`\n  }\n\n  const parentDir = path.dirname(rootDir)\n\n  // Handle prefix logic\n  let prefix: string\n\n  if (options?.prefix === undefined) {\n    // No prefix in options - calculate default: <basename>-looms\n    const mainFolderName = path.basename(rootDir)\n    prefix = mainFolderName ? `${mainFolderName}-looms/` : 'looms/'\n  } else if (options.prefix === '') {\n    // Empty string = no prefix mode\n    prefix = ''\n  } else {\n    // Custom prefix provided\n    prefix = options.prefix\n\n    // Check if prefix contains forward slashes (nested directory structure)\n    const hasNestedPath = prefix.includes('/')\n\n    if (hasNestedPath) {\n      // Check if it ends with a separator character (dash, underscore, or slash)\n      const endsWithSeparator = /[-_/]$/.test(prefix)\n\n      if (!endsWithSeparator) {\n        // Has nested path but no trailing separator: auto-append hyphen\n        // Example: \"temp/looms\" becomes \"temp/looms-\"\n        prefix = `${prefix}-`\n      }\n      // If it already ends with -, _, or /, keep as-is\n    } else {\n      // Single-level prefix: auto-append separator if it doesn't end with one\n      const endsWithSeparator = /[-_]$/.test(prefix)\n      if (!endsWithSeparator) {\n        prefix = `${prefix}-`\n      }\n    }\n  }\n\n  // Apply prefix (or not, if empty)\n  if (prefix === '') {\n    return path.join(parentDir, sanitized)\n  } else if (prefix.endsWith('/')) {\n    // Forward slash = nested directory, use path.join for proper handling\n    return path.join(parentDir, prefix, sanitized)\n  } else if (prefix.includes('/')) {\n    // Contains slash but doesn't end with slash = nested with separator (e.g., \"looms/myprefix-\")\n    // Split and handle: last part is prefix with separator, rest is directory path\n    const lastSlashIndex = prefix.lastIndexOf('/')\n    const dirPath = prefix.substring(0, lastSlashIndex)\n    const prefixWithSeparator = prefix.substring(lastSlashIndex + 1)\n    return path.join(parentDir, dirPath, `${prefixWithSeparator}${sanitized}`)\n  } else {\n    // Dash/underscore separator = single directory name\n    return path.join(parentDir, `${prefix}${sanitized}`)\n  }\n}\n\n/**\n * Validate that a directory is a valid Git repository\n */\nexport async function isValidGitRepo(path: string): Promise<boolean> {\n  try {\n    await executeGitCommand(['rev-parse', '--git-dir'], { cwd: path })\n    return true\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the current branch name for a repository\n */\nexport async function getCurrentBranch(path: string = process.cwd()): Promise<string | null> {\n  try {\n    const result = await executeGitCommand(['branch', '--show-current'], { cwd: path })\n    return result.trim()\n  } catch {\n    return null\n  }\n}\n\n/**\n * Check if a branch exists (local or remote)\n */\nexport async function branchExists(\n  branchName: string,\n  path: string = process.cwd(),\n  includeRemote = true\n): Promise<boolean> {\n  try {\n    // Check local branches\n    const localResult = await executeGitCommand(['branch', '--list', branchName], { cwd: path })\n    if (localResult.trim()) {\n      return true\n    }\n\n    // Check remote branches if requested\n    if (includeRemote) {\n      const remoteResult = await executeGitCommand(['branch', '-r', '--list', `*/${branchName}`], {\n        cwd: path,\n      })\n      if (remoteResult.trim()) {\n        return true\n      }\n    }\n\n    return false\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the root directory of the current worktree\n * Returns the worktree root when in a linked worktree, or main repo root when in main worktree\n */\nexport async function getWorktreeRoot(path: string = process.cwd()): Promise<string | null> {\n  try {\n    const result = await executeGitCommand(['rev-parse', '--show-toplevel'], { cwd: path })\n    return result.trim()\n  } catch {\n    return null\n  }\n}\n\n/**\n * Get the main repository root directory\n * Returns the main repo root even when called from a linked worktree\n */\nexport async function getRepoRoot(path: string = process.cwd()): Promise<string | null> {\n  try {\n    // Get the common git directory (shared by all worktrees)\n    const gitCommonDir = await executeGitCommand(\n      ['rev-parse', '--path-format=absolute', '--git-common-dir'],\n      { cwd: path }\n    )\n    const trimmedPath = gitCommonDir.trim()\n\n    // Handle linked worktree: /path/to/repo/.git/worktrees/worktree-name -> /path/to/repo\n    // Handle main worktree: /path/to/repo/.git -> /path/to/repo\n    const repoRoot = trimmedPath\n      .replace(/\\/\\.git\\/worktrees\\/[^/]+$/, '')  // Remove /.git/worktrees/name suffix\n      .replace(/\\/\\.git$/, '')                     // Remove /.git suffix\n\n    return repoRoot\n  } catch(error) {\n    logger.warn(`Failed to determine repo root from git-common-dir: ${path}`, error instanceof Error ? error.message : String(error))\n    return null\n  }\n}\n\n/**\n * Find the worktree path where main branch is checked out\n * Copies bash script approach: parse git worktree list to find main\n */\nexport async function findMainWorktreePath(\n  path: string = process.cwd(),\n  options?: { mainBranch?: string }\n): Promise<string> {\n  try {\n    const output = await executeGitCommand(['worktree', 'list', '--porcelain'], { cwd: path })\n    const worktrees = parseWorktreeList(output, options?.mainBranch)\n\n    // Guard: empty worktree list\n    if (worktrees.length === 0) {\n      throw new Error('No worktrees found in repository')\n    }\n\n    // Tier 1: Check for specified mainBranch in options\n    if (options?.mainBranch) {\n      const specified = worktrees.find(wt => wt.branch === options.mainBranch)\n      if (!specified?.path) {\n        throw new Error(\n          `No worktree found with branch '${options.mainBranch}' (specified in settings). Available worktrees: ${worktrees.map(wt => `${wt.path} (${wt.branch})`).join(', ')}`\n        )\n      }\n      return specified.path\n    }\n\n    // Tier 2: Look for \"main\" branch\n    const mainBranch = worktrees.find(wt => wt.branch === 'main')\n    if (mainBranch?.path) {\n      return mainBranch.path\n    }\n\n    // Tier 3: Use first worktree (primary worktree)\n    const firstWorktree = worktrees[0]\n    if (!firstWorktree?.path) {\n      throw new Error('Failed to determine primary worktree path')\n    }\n    return firstWorktree.path\n  } catch (error) {\n    if (\n      error instanceof Error &&\n      (error.message.includes('No worktree found with branch') ||\n        error.message.includes('No worktrees found') ||\n        error.message.includes('Failed to determine primary worktree'))\n    ) {\n      // Re-throw our specific errors\n      throw error\n    }\n    throw new Error(`Failed to find main worktree: ${error instanceof Error ? error.message : String(error)}`)\n  }\n}\n\n/**\n * Find main worktree path with automatic settings loading\n *\n * This is a convenience wrapper that:\n * 1. Loads project settings from .iloom/settings.json\n * 2. Extracts mainBranch configuration if present\n * 3. Calls findMainWorktreePath with appropriate options\n *\n * @param path - Path to search from (defaults to process.cwd())\n * @param settingsManager - Optional SettingsManager instance (for DI/testing)\n * @returns Path to main worktree\n * @throws Error if main worktree cannot be found\n */\nexport async function findMainWorktreePathWithSettings(\n  path?: string,\n  settingsManager?: SettingsManagerType\n): Promise<string> {\n  // Lazy load SettingsManager to avoid circular dependencies\n  settingsManager ??= new SettingsManager()\n\n  const settings = await settingsManager.loadSettings(path)\n  const findOptions = settings.mainBranch ? { mainBranch: settings.mainBranch } : undefined\n  return findMainWorktreePath(path, findOptions)\n}\n\n/**\n * Find the worktree path where a specific branch is checked out\n *\n * Used by MergeManager to find the correct worktree for child loom merges.\n * When finishing a child loom, we need to find where the PARENT branch is\n * checked out (the merge target), not where settings.mainBranch is checked out.\n *\n * @param branchName - The branch name to find\n * @param path - Path to search from (defaults to process.cwd())\n * @returns Path to worktree where the branch is checked out\n * @throws Error if no worktree has the specified branch checked out\n */\nexport async function findWorktreeForBranch(\n  branchName: string,\n  path: string = process.cwd()\n): Promise<string> {\n  try {\n    const output = await executeGitCommand(['worktree', 'list', '--porcelain'], { cwd: path })\n    const worktrees = parseWorktreeList(output, branchName)\n\n    // Guard: empty worktree list\n    if (worktrees.length === 0) {\n      throw new Error('No worktrees found in repository')\n    }\n\n    // Find the worktree with the specified branch\n    const targetWorktree = worktrees.find(wt => wt.branch === branchName)\n    if (!targetWorktree?.path) {\n      throw new Error(\n        `No worktree found with branch '${branchName}' checked out. ` +\n        `Available worktrees: ${worktrees.map(wt => `${wt.path} (${wt.branch})`).join(', ')}`\n      )\n    }\n    return targetWorktree.path\n  } catch (error) {\n    if (\n      error instanceof Error &&\n      (error.message.includes('No worktree found with branch') ||\n        error.message.includes('No worktrees found'))\n    ) {\n      // Re-throw our specific errors\n      throw error\n    }\n    throw new Error(`Failed to find worktree for branch '${branchName}': ${error instanceof Error ? error.message : String(error)}`)\n  }\n}\n\n/**\n * Check if there are uncommitted changes in a repository\n */\nexport async function hasUncommittedChanges(path: string = process.cwd()): Promise<boolean> {\n  try {\n    const result = await executeGitCommand(['status', '--porcelain'], { cwd: path })\n    return result.trim().length > 0\n  } catch {\n    return false\n  }\n}\n\n/**\n * Get the default branch name for a repository\n */\nexport async function getDefaultBranch(path: string = process.cwd()): Promise<string> {\n  try {\n    // Try to get from remote\n    const remoteResult = await executeGitCommand(['symbolic-ref', 'refs/remotes/origin/HEAD'], {\n      cwd: path,\n    })\n    const match = remoteResult.match(/refs\\/remotes\\/origin\\/(.+)/)\n    if (match) return match[1] ?? 'main'\n\n    // Fallback to common default branch names\n    const commonDefaults = ['main', 'master', 'develop']\n    for (const branch of commonDefaults) {\n      if (await branchExists(branch, path)) {\n        return branch\n      }\n    }\n\n    return 'main' // Final fallback\n  } catch {\n    return 'main'\n  }\n}\n\n/**\n * Find all branches related to a GitHub issue or PR number\n * Matches patterns like:\n * - Issue patterns: issue-25, issue/25, 25-feature, feat-25, feat/issue-25\n * - PR patterns: pr/25, pull/25, pr-25, feature/pr-25\n *\n * Based on bash cleanup-worktree.sh find_issue_branches() (lines 133-154)\n *\n * @param issueNumber - The issue or PR number to search for\n * @param path - Working directory to search from (defaults to process.cwd())\n * @param settingsManager - Optional SettingsManager instance (for DI/testing)\n */\nexport async function findAllBranchesForIssue(\n  issueNumber: string | number,\n  path: string = process.cwd(),\n  settingsManager?: SettingsManagerType\n): Promise<string[]> {\n  // Lazy load SettingsManager to avoid circular dependencies\n  if (!settingsManager) {\n    const { SettingsManager: SM } = await import('../lib/SettingsManager.js')\n    settingsManager = new SM()\n  }\n\n  // Get protected branches list from centralized method\n  const protectedBranches = await settingsManager.getProtectedBranches(path)\n\n  // Get all branches (local and remote)\n  const output = await executeGitCommand(['branch', '-a'], { cwd: path })\n\n  const branches: string[] = []\n  const lines = output.split('\\n').filter(Boolean)\n\n  for (const line of lines) {\n    // Skip remotes/origin/HEAD pointer\n    if (line.includes('remotes/origin/HEAD')) {\n      continue\n    }\n\n    // Clean the branch name:\n    // 1. Remove git status markers (* + spaces at start)\n    let cleanBranch = line.replace(/^[*+ ]+/, '')\n\n    // 2. Remove 'origin/' prefix if present\n    cleanBranch = cleanBranch.replace(/^origin\\//, '')\n\n    // 3. Remove 'remotes/origin/' prefix if present\n    cleanBranch = cleanBranch.replace(/^remotes\\/origin\\//, '')\n\n    // 4. Trim any remaining whitespace\n    cleanBranch = cleanBranch.trim()\n\n    // Skip protected branches\n    if (protectedBranches.includes(cleanBranch)) {\n      continue\n    }\n\n    // Check if branch contains issue number with strict word boundary pattern\n    // The issue number must NOT be:\n    // - Part of a larger number (preceded or followed by a digit)\n    // - After an unknown word (like \"tissue-25\")\n    // The issue number CAN be:\n    // - At start: \"25-feature\"\n    // - After known prefix + separator: \"issue-25\", \"feat-25\", \"fix-25\", \"pr-25\"\n    // - After just a separator with no prefix: test_25 (separator at start)\n\n    // First check: not part of a larger number\n    const notPartOfNumber = new RegExp(`(?<!\\\\d)${issueNumber}(?!\\\\d)`)\n    if (!notPartOfNumber.test(cleanBranch)) {\n      continue\n    }\n\n    // Second check: if preceded by letters, validate they're known issue-related prefixes\n    // This prevents \"tissue-25\" but allows \"issue-25\", \"feat-25\", etc.\n    const beforeNumber = cleanBranch.substring(0, cleanBranch.indexOf(String(issueNumber)))\n\n    if (beforeNumber) {\n      // Extract the last word (letters) before the number\n      const lastWord = beforeNumber.match(/([a-zA-Z]+)[-_/\\s]*$/)\n      if (lastWord?.[1]) {\n        const word = lastWord[1].toLowerCase()\n        // Known prefixes for issue-related branches\n        const knownPrefixes = [\n          'issue', 'issues',\n          'feat', 'feature', 'features',\n          'fix', 'fixes', 'bugfix', 'hotfix',\n          'pr', 'pull',\n          'test', 'tests',\n          'chore',\n          'docs',\n          'refactor',\n          'perf',\n          'style',\n          'ci',\n          'build',\n          'revert'\n        ]\n\n        // If we found a word and it's NOT in the known list, skip this branch\n        if (!knownPrefixes.includes(word)) {\n          continue\n        }\n      }\n    }\n\n    // Passed all checks - add to results\n    if (!branches.includes(cleanBranch)) {\n      branches.push(cleanBranch)\n    }\n  }\n\n  return branches\n}\n\n/**\n * Check if a repository is empty (has no commits yet)\n * @param path - Repository path to check (defaults to process.cwd())\n * @returns true if repository has no commits, false otherwise\n */\nexport async function isEmptyRepository(path: string = process.cwd()): Promise<boolean> {\n  try {\n    await executeGitCommand(['rev-parse', '--verify', 'HEAD'], { cwd: path })\n    return false // HEAD exists, repo has commits\n  } catch {\n    return true // HEAD doesn't exist, repo is empty\n  }\n}\n\n/**\n * Ensure repository has at least one commit\n * Creates an initial empty commit if repository is empty\n * @param path - Repository path (defaults to process.cwd())\n */\nexport async function ensureRepositoryHasCommits(path: string = process.cwd()): Promise<void> {\n  const isEmpty = await isEmptyRepository(path)\n  if (isEmpty) {\n    await executeGitCommand(['commit', '--no-verify', '--allow-empty', '-m', 'Initial commit'], { cwd: path })\n  }\n}\n\n/**\n * Push a branch to remote repository\n * Used for PR workflow to push changes to remote without merging locally\n *\n * @param branchName - The branch name to push\n * @param worktreePath - The worktree path where the branch is checked out\n * @param options - Push options\n * @throws Error if push fails\n */\nexport async function pushBranchToRemote(\n  branchName: string,\n  worktreePath: string,\n  options?: { dryRun?: boolean }\n): Promise<void> {\n  if (options?.dryRun) {\n    // In dry-run mode, just log what would be done\n    return\n  }\n\n  try {\n    // Execute: git push origin <branch-name>\n    // This matches the bash script behavior (merge-and-clean.sh line 359)\n    await executeGitCommand(['push', 'origin', branchName], {\n      cwd: worktreePath,\n      timeout: 120000, // 120 second timeout for push operations\n    })\n  } catch (error) {\n    // Provide helpful error message based on common push failures\n    const errorMessage = error instanceof Error ? error.message : String(error)\n\n    // Check for common error patterns and provide context, but ALWAYS include original error\n    if (errorMessage.includes('failed to push') || errorMessage.includes('rejected')) {\n      throw new Error(\n        `Failed to push changes to origin/${branchName}\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Possible causes:\\n` +\n        `   • Remote branch was deleted\\n` +\n        `   • Push was rejected (non-fast-forward)\\n` +\n        `   • Network connectivity issues\\n\\n` +\n        `   To retry: il finish --pr <number>\\n` +\n        `   To force push: git push origin ${branchName} --force`\n      )\n    }\n\n    if (errorMessage.includes('Could not resolve host') || errorMessage.includes('network')) {\n      throw new Error(\n        `Failed to push changes to origin/${branchName}: Network connectivity issues\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Check your internet connection and try again.`\n      )\n    }\n\n    if (errorMessage.includes('No such remote')) {\n      throw new Error(\n        `Failed to push changes: Remote 'origin' not found\\n\\n` +\n        `   Git error: ${errorMessage}\\n\\n` +\n        `   Configure remote: git remote add origin <url>`\n      )\n    }\n\n    // For other errors, re-throw with original message\n    throw new Error(`Failed to push to remote: ${errorMessage}`)\n  }\n}\n\n/**\n * Check if a file is tracked by git\n * Uses git ls-files to check if file is in the index\n * @param filePath - Absolute or relative path to the file\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if file is tracked, false otherwise\n */\nexport async function isFileTrackedByGit(\n  filePath: string,\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    const result = await executeGitCommand(\n      ['ls-files', '--error-unmatch', filePath],\n      { cwd }\n    )\n    return result.trim().length > 0\n  } catch (error) {\n    // Only return false if it's the specific \"pathspec did not match\" error\n    const errorMessage = error instanceof Error ? error.message : String(error)\n    if (errorMessage.includes('pathspec') && errorMessage.includes('did not match')) {\n      return false\n    }\n    // Re-throw other errors\n    throw error\n  }\n}\n\n/**\n * Check if a file is gitignored\n * Uses `git check-ignore` which handles nested gitignore files and global patterns\n *\n * @param filePath - Path to file to check (relative to repo root)\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if file IS ignored, false if NOT ignored or on error\n */\nexport async function isFileGitignored(\n  filePath: string,\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    await executeGitCommand(['check-ignore', '-q', filePath], { cwd })\n    return true // Exit 0 = file IS ignored\n  } catch {\n    return false // Exit 1 = NOT ignored (or error)\n  }\n}\n\n/**\n * Check if a branch is merged into the main branch\n *\n * Uses `git merge-base --is-ancestor` which is more reliable than `git branch -d`'s check.\n * The `-d` flag checks against current HEAD, which can give false positives when:\n * - Running from a worktree where main isn't checked out\n * - Squash or rebase merges were used\n *\n * This function explicitly checks if the branch tip is an ancestor of the main branch,\n * providing consistent results regardless of which worktree the command runs from.\n *\n * @param branchName - The branch to check\n * @param mainBranch - The main branch to check against (defaults to 'main')\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if branch is merged into main, false otherwise\n */\nexport async function isBranchMergedIntoMain(\n  branchName: string,\n  mainBranch: string = 'main',\n  cwd: string = process.cwd()\n): Promise<boolean> {\n  try {\n    // git merge-base --is-ancestor exits 0 if branchName is ancestor of mainBranch, 1 if not\n    await executeGitCommand(['merge-base', '--is-ancestor', branchName, mainBranch], { cwd })\n    return true\n  } catch {\n    return false\n  }\n}\n\n/**\n * Check if a branch exists on the remote (origin) and is up-to-date with local\n * Useful for GitHub-PR workflows to ensure branch has been pushed and is current\n *\n * @param branchName - Name of the branch to check\n * @param cwd - Working directory to run git command in\n * @returns Promise<boolean> - true if remote branch exists and matches local HEAD, false otherwise\n */\nexport async function isRemoteBranchUpToDate(\n  branchName: string,\n  cwd: string\n): Promise<boolean> {\n  try {\n    // First, check if remote branch exists and get its commit hash\n    const remoteResult = await executeGitCommand(['ls-remote', '--heads', 'origin', branchName], { cwd })\n\n    if (remoteResult.trim().length === 0) {\n      // Remote branch doesn't exist\n      return false\n    }\n\n    // Extract the commit hash from ls-remote output (format: \"hash\\trefs/heads/branchname\")\n    const remoteCommit = remoteResult.trim().split('\\t')[0]\n\n    // Get the local branch's HEAD commit\n    const localCommit = await executeGitCommand(['rev-parse', branchName], { cwd })\n\n    // Both must exist and match\n    return localCommit.trim() === remoteCommit\n  } catch {\n    return false\n  }\n}\n\n/**\n * Result of checking remote branch status for safety validation\n */\nexport interface RemoteBranchStatus {\n  /** Whether the remote branch exists */\n  exists: boolean\n  /** Whether the remote is ahead of local (has commits not present locally) */\n  remoteAhead: boolean\n  /** Whether local is ahead of remote (has unpushed commits) */\n  localAhead: boolean\n  /** Whether a network error occurred during the check */\n  networkError: boolean\n  /** Error message if network error occurred */\n  errorMessage?: string\n}\n\n/**\n * Check the status of a remote branch for safety validation during cleanup\n * This function provides detailed status needed for the 5-point safety check:\n *\n * The key insight: we care about DATA LOSS, not about remote state\n * - Remote ahead of local is SAFE (commits exist on remote, no data loss)\n * - Local ahead of remote is DANGEROUS (unpushed commits would be lost)\n *\n * 5-point safety logic:\n * 1. Network error -> BLOCK (can't verify safety)\n * 2. Remote ahead of local -> OK (no data loss - commits exist on remote)\n * 3. Local ahead of remote (unpushed commits) -> BLOCK (data loss risk)\n * 4. No remote, merged to main -> OK (work is in main)\n * 5. No remote, NOT merged to main -> BLOCK (unmerged work would be lost)\n *\n * @param branchName - Name of the branch to check\n * @param cwd - Working directory to run git command in\n * @returns Promise<RemoteBranchStatus> - Detailed status of the remote branch\n */\nexport async function checkRemoteBranchStatus(\n  branchName: string,\n  cwd: string\n): Promise<RemoteBranchStatus> {\n  try {\n    // First, fetch to ensure we have the latest remote refs\n    // This is important to accurately detect if remote is ahead\n    try {\n      await executeGitCommand(['fetch', 'origin', branchName], { cwd, timeout: 30000 })\n    } catch (fetchError) {\n      // Fetch failing for a specific branch is OK - branch might not exist on remote\n      // We'll detect this in the ls-remote call\n      const fetchErrorMessage = fetchError instanceof Error ? fetchError.message : String(fetchError)\n\n      // Check if this is a network error vs branch not found\n      if (fetchErrorMessage.includes('Could not resolve host') ||\n          fetchErrorMessage.includes('unable to access') ||\n          fetchErrorMessage.includes('network') ||\n          fetchErrorMessage.includes('Connection refused') ||\n          fetchErrorMessage.includes('Connection timed out')) {\n        return {\n          exists: false,\n          remoteAhead: false,\n          localAhead: false,\n          networkError: true,\n          errorMessage: fetchErrorMessage\n        }\n      }\n      // Otherwise continue - branch might just not exist on remote\n    }\n\n    // Check if remote branch exists using ls-remote\n    const remoteResult = await executeGitCommand(['ls-remote', '--heads', 'origin', branchName], { cwd })\n\n    if (remoteResult.trim().length === 0) {\n      // Remote branch doesn't exist\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Remote branch exists - check if it's ahead of local\n    // Extract the remote commit hash\n    const remoteCommit = remoteResult.trim().split('\\t')[0]\n\n    // Guard against undefined (shouldn't happen but TypeScript wants it)\n    if (!remoteCommit) {\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Get the local branch's HEAD commit\n    const localCommit = await executeGitCommand(['rev-parse', branchName], { cwd })\n    const localCommitTrimmed = localCommit.trim()\n\n    if (remoteCommit === localCommitTrimmed) {\n      // Remote and local are at the same commit - safe (no unpushed commits)\n      return {\n        exists: true,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: false\n      }\n    }\n\n    // Commits differ - check if remote is ahead of local\n    // Use merge-base to find common ancestor, then compare\n    try {\n      // Check if localCommit is an ancestor of remoteCommit (meaning remote is ahead)\n      await executeGitCommand(['merge-base', '--is-ancestor', localCommitTrimmed, remoteCommit], { cwd })\n      // If we get here, local IS an ancestor of remote, meaning remote is ahead\n      // This is SAFE - no data loss because commits exist on remote\n      return {\n        exists: true,\n        remoteAhead: true,\n        localAhead: false,\n        networkError: false\n      }\n    } catch {\n      // Local is NOT an ancestor of remote\n      // This means local is ahead or branches have diverged\n      // Either way, local has unpushed commits - this is DANGEROUS (data loss risk)\n      return {\n        exists: true,\n        remoteAhead: false,\n        localAhead: true,\n        networkError: false\n      }\n    }\n  } catch (error) {\n    // Check if this is a network error\n    const errorMessage = error instanceof Error ? error.message : String(error)\n\n    if (errorMessage.includes('Could not resolve host') ||\n        errorMessage.includes('unable to access') ||\n        errorMessage.includes('network') ||\n        errorMessage.includes('Connection refused') ||\n        errorMessage.includes('Connection timed out')) {\n      return {\n        exists: false,\n        remoteAhead: false,\n        localAhead: false,\n        networkError: true,\n        errorMessage\n      }\n    }\n\n    // For other errors, assume remote doesn't exist\n    return {\n      exists: false,\n      remoteAhead: false,\n      localAhead: false,\n      networkError: false\n    }\n  }\n}\n\n/**\n * Get the merge target branch for a loom\n * Priority: parent loom metadata (parentLoom.branchName) > configured main branch > 'main'\n *\n * This is the shared utility for determining where a branch should merge to.\n * Child looms merge to their parent branch, standalone looms merge to main.\n *\n * @param worktreePath - Path to load metadata/settings from (defaults to process.cwd())\n * @param options - Optional dependency injection for testing\n * @returns The branch name to merge into\n */\nexport async function getMergeTargetBranch(\n  worktreePath: string = process.cwd(),\n  options?: {\n    settingsManager?: SettingsManagerType\n    metadataManager?: MetadataManager\n  }\n): Promise<string> {\n  const settingsManager = options?.settingsManager ?? new SettingsManager()\n  const metadataManager = options?.metadataManager ?? new MetadataManager()\n\n  // Check for parent loom metadata first (child looms merge to parent)\n  logger.debug(`Checking for parent loom metadata at: ${worktreePath}`)\n  const metadata = await metadataManager.readMetadata(worktreePath)\n  if (metadata?.parentLoom?.branchName) {\n    logger.debug(`Using parent branch as merge target: ${metadata.parentLoom.branchName}`)\n    return metadata.parentLoom.branchName\n  }\n  logger.debug('No parent loom metadata found, falling back to settings')\n\n  // Fall back to configured main branch\n  const settings = await settingsManager.loadSettings(worktreePath)\n  const mainBranch = settings.mainBranch ?? 'main'\n  logger.debug(`Using configured main branch as merge target: ${mainBranch}`)\n  return mainBranch\n}\n\n/**\n * Placeholder commit prefix used by github-draft-pr mode.\n * Created during il start to enable draft PR creation (GitHub requires at least one commit ahead of base).\n * Removed during il finish before the final push to maintain clean commit history.\n */\nexport const PLACEHOLDER_COMMIT_PREFIX = '[iloom-temp]'\n\n/**\n * Check if HEAD commit is a placeholder commit\n * @param cwd - Working directory (defaults to process.cwd())\n * @returns true if HEAD is a placeholder commit\n */\nexport async function isPlaceholderCommit(cwd: string = process.cwd()): Promise<boolean> {\n  try {\n    const subject = await executeGitCommand(['log', '-1', '--format=%s', 'HEAD'], { cwd })\n    return subject.trim().startsWith(PLACEHOLDER_COMMIT_PREFIX)\n  } catch {\n    // No HEAD (empty repo) or other error - not a placeholder\n    return false\n  }\n}\n\n/**\n * Find placeholder commit SHA in history using git log --grep\n * @param worktreePath - Working directory\n * @returns SHA of placeholder commit if found, null otherwise\n */\nexport async function findPlaceholderCommitSha(worktreePath: string): Promise<string | null> {\n  try {\n    // Search commit history for placeholder prefix\n    // Use --fixed-strings to treat the pattern literally (brackets are regex special chars)\n    const log = await executeGitCommand(\n      ['log', '--format=%H', '--fixed-strings', '--grep', PLACEHOLDER_COMMIT_PREFIX, '-n', '1'],\n      { cwd: worktreePath }\n    )\n    const sha = log.trim()\n    if (sha.length === 0) {\n      return null\n    }\n\n    // Verify the found commit actually has the placeholder prefix in its subject\n    // This guards against git grep matching in commit body instead of subject\n    const subject = await executeGitCommand(\n      ['log', '-1', '--format=%s', sha],\n      { cwd: worktreePath }\n    )\n    if (!subject.trim().startsWith(PLACEHOLDER_COMMIT_PREFIX)) {\n      return null\n    }\n\n    return sha\n  } catch {\n    return null\n  }\n}\n\n/**\n * Remove placeholder commit when it's HEAD\n * Uses soft reset to preserve any staged changes\n * @param worktreePath - Working directory\n * @returns true if placeholder was removed\n */\nexport async function removePlaceholderCommitFromHead(worktreePath: string): Promise<boolean> {\n  if (!await isPlaceholderCommit(worktreePath)) {\n    return false\n  }\n  await executeGitCommand(['reset', '--soft', 'HEAD~1'], { cwd: worktreePath })\n  return true\n}\n\n/**\n * Remove placeholder commit from history using rebase\n * Used when user has made commits on top of placeholder\n * @param worktreePath - Working directory\n * @param placeholderSha - SHA of the placeholder commit to remove\n * @throws Error if rebase fails\n */\nexport async function removePlaceholderCommitFromHistory(\n  worktreePath: string,\n  placeholderSha: string\n): Promise<void> {\n  // Get parent of placeholder commit\n  const parentSha = await executeGitCommand(\n    ['rev-parse', `${placeholderSha}^`],\n    { cwd: worktreePath }\n  )\n\n  // Rebase to drop the placeholder: rebase --onto parent^ placeholder\n  await executeGitCommand(\n    ['rebase', '--onto', parentSha.trim(), placeholderSha],\n    { cwd: worktreePath }\n  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package/dist/chunk-66BMJ25W.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/lib/LinearService.ts","../src/lib/IssueTrackerFactory.ts","../src/utils/FirstRunManager.ts","../src/utils/mcp.ts"],"sourcesContent":["/**\n * LinearService - IssueTracker implementation for Linear\n * Implements issue tracking operations using the @linear/sdk\n */\n\nimport type { Issue, PullRequest, IssueTrackerInputDetection } from '../types/index.js'\nimport type { LinearIssue } from '../types/linear.js'\nimport { LinearServiceError } from '../types/linear.js'\nimport {\n  fetchLinearIssue,\n  createLinearIssue,\n  updateLinearIssueState,\n} from '../utils/linear.js'\nimport { promptConfirmation } from '../utils/prompt.js'\nimport type { IssueTracker } from './IssueTracker.js'\nimport { logger } from '../utils/logger.js'\n\n/**\n * Linear service configuration options\n */\nexport interface LinearServiceConfig {\n  /** Linear team key (e.g., \"ENG\", \"PLAT\") */\n  teamId?: string\n  /** Branch naming template (e.g., \"feat/{{key}}__{{title}}\") */\n  branchFormat?: string\n  /** Linear API token (lin_api_...). If provided, sets process.env.LINEAR_API_TOKEN */\n  apiToken?: string\n}\n\n/**\n * Linear implementation of IssueTracker interface\n */\nexport class LinearService implements IssueTracker {\n  // IssueTracker interface implementation\n  readonly providerName = 'linear'\n  readonly supportsPullRequests = false // Linear doesn't have pull requests\n\n  private config: LinearServiceConfig\n  private prompter: (message: string) => Promise<boolean>\n\n  constructor(\n    config?: LinearServiceConfig,\n    options?: { prompter?: (message: string) => Promise<boolean> },\n  ) {\n    this.config = config ?? {}\n    this.prompter = options?.prompter ?? promptConfirmation\n\n    // Set API token from config if provided (follows mcp.ts pattern)\n    if (this.config.apiToken) {\n      process.env.LINEAR_API_TOKEN = this.config.apiToken\n    }\n  }\n\n  /**\n   * Detect if input matches Linear identifier format (TEAM-NUMBER)\n   * @param input - User input string\n   * @param _repo - Repository (unused for Linear)\n   * @returns Detection result with type and identifier\n   */\n  public async detectInputType(\n    input: string,\n    _repo?: string,\n  ): Promise<IssueTrackerInputDetection> {\n    logger.debug(`LinearService.detectInputType called with input: \"${input}\"`)\n\n    // Pattern: TEAM-NUMBER (e.g., ENG-123, PLAT-456)\n    // Requires at least 2 letters before dash to avoid conflict with PR-123 format\n    const linearPattern = /^([A-Z]{2,}-\\d+)$/i\n    const match = input.match(linearPattern)\n\n    if (!match?.[1]) {\n      logger.debug(`LinearService: Input \"${input}\" does not match Linear pattern`)\n      return { type: 'unknown', identifier: null, rawInput: input }\n    }\n\n    const identifier = match[1].toUpperCase()\n    logger.debug(`LinearService: Matched Linear identifier: ${identifier}`)\n\n    // Validate the issue exists in Linear\n    logger.debug(`LinearService: Checking if ${identifier} is a valid Linear issue via SDK`)\n    const issue = await this.isValidIssue(identifier)\n\n    if (issue) {\n      logger.debug(`LinearService: Issue ${identifier} found: \"${issue.title}\"`)\n      return { type: 'issue', identifier, rawInput: input }\n    }\n\n    // Not found\n    logger.debug(`LinearService: Issue ${identifier} NOT found by SDK`)\n    return { type: 'unknown', identifier: null, rawInput: input }\n  }\n\n  /**\n   * Fetch a Linear issue by identifier\n   * @param identifier - Linear issue identifier (string or number)\n   * @param _repo - Repository (unused for Linear)\n   * @returns Generic Issue type\n   * @throws LinearServiceError if issue not found\n   */\n  public async fetchIssue(identifier: string | number, _repo?: string): Promise<Issue> {\n    const linearIssue = await fetchLinearIssue(String(identifier))\n    return this.mapLinearIssueToIssue(linearIssue)\n  }\n\n  /**\n   * Check if an issue identifier is valid (silent validation)\n   * @param identifier - Linear issue identifier\n   * @param _repo - Repository (unused for Linear)\n   * @returns Issue if valid, false if not found\n   */\n  public async isValidIssue(identifier: string | number, _repo?: string): Promise<Issue | false> {\n    try {\n      return await this.fetchIssue(identifier)\n    } catch (error) {\n      // Return false for NOT_FOUND errors (expected during detection)\n      if (error instanceof LinearServiceError && error.code === 'NOT_FOUND') {\n        return false\n      }\n      // Re-throw unexpected errors\n      throw error\n    }\n  }\n\n  /**\n   * Validate issue state and prompt user if closed\n   * @param issue - Issue to validate\n   * @throws LinearServiceError if user cancels due to closed issue\n   */\n  public async validateIssueState(issue: Issue): Promise<void> {\n    if (issue.state === 'closed') {\n      const shouldContinue = await this.prompter(\n        `Issue ${issue.number} is closed. Continue anyway?`,\n      )\n\n      if (!shouldContinue) {\n        throw new LinearServiceError('INVALID_STATE', 'User cancelled due to closed issue')\n      }\n    }\n  }\n\n  /**\n   * Create a new Linear issue\n   * @param title - Issue title\n   * @param body - Issue description (markdown)\n   * @param _repository - Repository (unused for Linear)\n   * @param labels - Optional label names\n   * @returns Created issue identifier and URL\n   * @throws LinearServiceError if teamId not configured or creation fails\n   */\n  public async createIssue(\n    title: string,\n    body: string,\n    _repository?: string,\n    labels?: string[],\n  ): Promise<{ number: string | number; url: string }> {\n    // Require teamId configuration\n    if (!this.config.teamId) {\n      throw new LinearServiceError(\n        'INVALID_STATE',\n        'Linear teamId not configured. Run `il init` to configure Linear settings.',\n      )\n    }\n\n    logger.info(`Creating Linear issue in team ${this.config.teamId}: ${title}`)\n\n    const result = await createLinearIssue(title, body, this.config.teamId, labels)\n\n    return {\n      number: result.identifier,\n      url: result.url,\n    }\n  }\n\n  /**\n   * Get the web URL for a Linear issue\n   * @param identifier - Linear issue identifier\n   * @param _repo - Repository (unused for Linear)\n   * @returns Issue URL\n   */\n  public async getIssueUrl(identifier: string | number, _repo?: string): Promise<string> {\n    const issue = await this.fetchIssue(identifier)\n    return issue.url\n  }\n\n  /**\n   * Move a Linear issue to \"In Progress\" state\n   * @param identifier - Linear issue identifier\n   * @throws LinearServiceError if state update fails\n   */\n  public async moveIssueToInProgress(identifier: string | number): Promise<void> {\n    logger.info(`Moving Linear issue ${identifier} to In Progress`)\n    await updateLinearIssueState(String(identifier), 'In Progress')\n  }\n\n  /**\n   * Extract issue context for AI prompts\n   * @param entity - Issue (Linear doesn't have PRs)\n   * @returns Formatted context string\n   */\n  public extractContext(entity: Issue | PullRequest): string {\n    // Linear doesn't have PRs, always an issue\n    const issue = entity as Issue\n    return `Linear Issue ${issue.number}: ${issue.title}\\nState: ${issue.state}\\n\\n${issue.body}`\n  }\n\n  /**\n   * Map Linear API issue to generic Issue type\n   * @param linear - Linear issue from SDK\n   * @returns Generic Issue type\n   */\n  private mapLinearIssueToIssue(linear: LinearIssue): Issue {\n    return {\n      number: linear.identifier, // Keep as string (e.g., \"ENG-123\")\n      title: linear.title,\n      body: linear.description ?? '',\n      state: linear.state ? (linear.state.toLowerCase().includes('done') || linear.state.toLowerCase().includes('completed') || linear.state.toLowerCase().includes('canceled') ? 'closed' : 'open') : 'open',\n      labels: [],\n      assignees: [],\n      url: linear.url,\n    }\n  }\n}\n","// IssueTrackerFactory - creates appropriate IssueTracker based on settings\n// Follows pattern from database provider instantiation\n\nimport type { IssueTracker } from './IssueTracker.js'\nimport { GitHubService } from './GitHubService.js'\nimport { LinearService, type LinearServiceConfig } from './LinearService.js'\nimport type { IloomSettings } from './SettingsManager.js'\nimport { getLogger } from '../utils/logger-context.js'\n\nexport type IssueTrackerProviderType = 'github' | 'linear'\n\n/**\n * Factory for creating IssueTracker instances based on settings\n * Provides a single point of provider instantiation\n *\n * Usage:\n *   const tracker = IssueTrackerFactory.create(settings, { useClaude: true })\n *   const issue = await tracker.fetchIssue(123)\n */\nexport class IssueTrackerFactory {\n\t/**\n\t * Create an IssueTracker instance based on settings configuration\n\t * Defaults to GitHub if no provider specified\n\t *\n\t * @param settings - iloom settings containing issueManagement.provider\n\t * @returns IssueTracker instance configured for the specified provider\n\t * @throws Error if provider type is not supported\n\t */\n\tstatic create(settings: IloomSettings): IssueTracker {\n\t\tconst provider = settings.issueManagement?.provider ?? 'github'\n\n\t\tgetLogger().debug(`IssueTrackerFactory: Creating tracker for provider \"${provider}\"`)\n\t\tgetLogger().debug(`IssueTrackerFactory: issueManagement settings:`, JSON.stringify(settings.issueManagement, null, 2))\n\n\t\tswitch (provider) {\n\t\t\tcase 'github':\n\t\t\t\tgetLogger().debug('IssueTrackerFactory: Creating GitHubService')\n\t\t\t\treturn new GitHubService()\n\t\t\tcase 'linear': {\n\t\t\t\tconst linearSettings = settings.issueManagement?.linear\n\t\t\t\tconst linearConfig: LinearServiceConfig = {}\n\n\t\t\t\tif (linearSettings?.teamId) {\n\t\t\t\t\tlinearConfig.teamId = linearSettings.teamId\n\t\t\t\t}\n\t\t\t\tif (linearSettings?.branchFormat) {\n\t\t\t\t\tlinearConfig.branchFormat = linearSettings.branchFormat\n\t\t\t\t}\n\t\t\t\tif (linearSettings?.apiToken) {\n\t\t\t\t\tlinearConfig.apiToken = linearSettings.apiToken\n\t\t\t\t}\n\n\t\t\t\tgetLogger().debug(`IssueTrackerFactory: Creating LinearService with config:`, JSON.stringify(linearConfig, null, 2))\n\t\t\t\treturn new LinearService(linearConfig)\n\t\t\t}\n\t\t\tdefault:\n\t\t\t\tthrow new Error(`Unsupported issue tracker provider: ${provider}`)\n\t\t}\n\t}\n\n\t/**\n\t * Get the configured provider name from settings\n\t * Defaults to 'github' if not configured\n\t *\n\t * @param settings - iloom settings\n\t * @returns Provider type string\n\t */\n\tstatic getProviderName(settings: IloomSettings): IssueTrackerProviderType {\n\t\treturn (settings.issueManagement?.provider ?? 'github') as IssueTrackerProviderType\n\t}\n}\n","import os from 'os'\nimport path from 'path'\nimport fs from 'fs-extra'\nimport { logger } from './logger.js'\n\n/**\n * FirstRunManager: Detect and track first-time spin usage via marker file\n *\n * Follows the same pattern as UpdateNotifier for file-based state tracking\n * in ~/.config/iloom-ai/ directory.\n *\n * Also supports project-level tracking for config wizard completion using\n * individual marker files per project in ~/.config/iloom-ai/projects/\n */\nexport class FirstRunManager {\n\tprivate markerFilePath: string\n\tprivate configDir: string\n\n\tconstructor(feature: string = 'spin') {\n\t\tthis.configDir = path.join(os.homedir(), '.config', 'iloom-ai')\n\t\tthis.markerFilePath = path.join(this.configDir, `${feature}-first-run`)\n\t\tlogger.debug('FirstRunManager initialized', {\n\t\t\tfeature,\n\t\t\tmarkerFilePath: this.markerFilePath\n\t\t})\n\t}\n\n\t/**\n\t * Get the directory for project marker files\n\t */\n\tprivate getProjectsDir(): string {\n\t\treturn path.join(this.configDir, 'projects')\n\t}\n\n\t/**\n\t * Resolve symlinks in project path to get canonical path\n\t * Falls back to original path on errors (broken symlinks, permissions, etc.)\n\t */\n\tprivate async resolveProjectPath(projectPath: string): Promise<string> {\n\t\ttry {\n\t\t\treturn await fs.realpath(projectPath)\n\t\t} catch {\n\t\t\tlogger.debug('resolveProjectPath: Failed to resolve symlink, using original path', { projectPath })\n\t\t\treturn projectPath\n\t\t}\n\t}\n\n\t/**\n\t * Convert a project path to a readable filename\n\t * /Users/adam/Projects/my-app -> Users__adam__Projects__my-app\n\t */\n\tprivate projectPathToFileName(projectPath: string): string {\n\t\tconst normalized = path.normalize(projectPath)\n\t\treturn normalized.replace(/^[/\\\\]+/, '').replace(/[/\\\\]+/g, '__')\n\t}\n\n\t/**\n\t * Get full path to a project's marker file\n\t */\n\tprivate getProjectMarkerPath(projectPath: string): string {\n\t\treturn path.join(this.getProjectsDir(), this.projectPathToFileName(projectPath))\n\t}\n\n\t/**\n\t * Extract project name from path\n\t */\n\tprivate getProjectName(projectPath: string): string {\n\t\treturn path.basename(projectPath)\n\t}\n\n\t/**\n\t * Check if a project has been configured\n\t * Returns true if project marker file exists\n\t */\n\tasync isProjectConfigured(projectPath?: string): Promise<boolean> {\n\t\tconst inputPath = projectPath ?? process.cwd()\n\t\tconst resolvedPath = await this.resolveProjectPath(inputPath)\n\t\tconst markerPath = this.getProjectMarkerPath(resolvedPath)\n\t\tlogger.debug('isProjectConfigured: Checking for marker file', { markerPath })\n\t\ttry {\n\t\t\tconst exists = await fs.pathExists(markerPath)\n\t\t\tlogger.debug(`isProjectConfigured: Marker file exists=${exists}`)\n\t\t\treturn exists\n\t\t} catch (error) {\n\t\t\t// On error, treat as not configured to allow wizard to run\n\t\t\tlogger.debug(`isProjectConfigured: Error checking marker file, treating as not configured: ${error}`)\n\t\t\treturn false\n\t\t}\n\t}\n\n\t/**\n\t * Check if a project has local .iloom settings files\n\t * Returns true if .iloom/settings.json or .iloom/settings.local.json exists with content\n\t */\n\tprivate async hasLocalSettings(projectPath: string): Promise<boolean> {\n\t\tconst iloomDir = path.join(projectPath, '.iloom')\n\t\tconst settingsPath = path.join(iloomDir, 'settings.json')\n\t\tconst settingsLocalPath = path.join(iloomDir, 'settings.local.json')\n\n\t\tconst hasSettings = await this.hasNonEmptySettingsFile(settingsPath)\n\t\tconst hasLocalSettings = await this.hasNonEmptySettingsFile(settingsLocalPath)\n\n\t\treturn hasSettings || hasLocalSettings\n\t}\n\n\t/**\n\t * Check if a settings file exists and has non-empty content\n\t */\n\tprivate async hasNonEmptySettingsFile(filePath: string): Promise<boolean> {\n\t\ttry {\n\t\t\tconst exists = await fs.pathExists(filePath)\n\t\t\tif (!exists) return false\n\t\t\tconst content = await fs.readFile(filePath, 'utf8')\n\t\t\tconst parsed = JSON.parse(content)\n\t\t\treturn Object.keys(parsed).length > 0\n\t\t} catch {\n\t\t\treturn false\n\t\t}\n\t}\n\n\t/**\n\t * Fixup legacy projects that have local config but lack the global marker file\n\t * This handles projects configured before global project tracking was implemented\n\t *\n\t * Returns object with:\n\t * - isConfigured: true if project is configured (either already had marker or fixup created one)\n\t * - wasFixedUp: true if fixup was performed (marker was created by this call)\n\t *\n\t * This combined return avoids duplicate isProjectConfigured() calls in needsFirstRunSetup()\n\t */\n\tasync fixupLegacyProject(projectPath?: string): Promise<{ isConfigured: boolean; wasFixedUp: boolean }> {\n\t\tconst inputPath = projectPath ?? process.cwd()\n\t\tconst resolvedPath = await this.resolveProjectPath(inputPath)\n\t\tlogger.debug('fixupLegacyProject: Checking for legacy project', { projectPath: resolvedPath })\n\n\t\t// Check if already has global marker - no fixup needed, but project IS configured\n\t\tconst hasMarker = await this.isProjectConfigured(resolvedPath)\n\t\tif (hasMarker) {\n\t\t\tlogger.debug('fixupLegacyProject: Project already has global marker')\n\t\t\treturn { isConfigured: true, wasFixedUp: false }\n\t\t}\n\n\t\t// Check if has local settings files - this indicates a legacy configured project\n\t\tconst hasLocal = await this.hasLocalSettings(resolvedPath)\n\t\tif (!hasLocal) {\n\t\t\tlogger.debug('fixupLegacyProject: No local settings found, not a legacy project')\n\t\t\treturn { isConfigured: false, wasFixedUp: false }\n\t\t}\n\n\t\t// Legacy project found - create the missing global marker\n\t\tlogger.debug('fixupLegacyProject: Legacy project detected, creating global marker')\n\t\tawait this.markProjectAsConfigured(resolvedPath)\n\t\treturn { isConfigured: true, wasFixedUp: true }\n\t}\n\n\t/**\n\t * Mark a project as configured\n\t * Creates a marker file with project metadata\n\t */\n\tasync markProjectAsConfigured(projectPath?: string): Promise<void> {\n\t\tconst inputPath = projectPath ?? process.cwd()\n\t\tconst resolvedPath = await this.resolveProjectPath(inputPath)\n\t\tconst markerPath = this.getProjectMarkerPath(resolvedPath)\n\t\tlogger.debug('markProjectAsConfigured: Creating marker file', { markerPath })\n\t\ttry {\n\t\t\tawait fs.ensureDir(this.getProjectsDir())\n\t\t\tconst markerContent = {\n\t\t\t\tconfiguredAt: new Date().toISOString(),\n\t\t\t\tprojectPath: resolvedPath,\n\t\t\t\tprojectName: this.getProjectName(resolvedPath)\n\t\t\t}\n\t\t\tawait fs.writeFile(markerPath, JSON.stringify(markerContent, null, 2), 'utf8')\n\t\t\tlogger.debug('markProjectAsConfigured: Marker file created successfully')\n\t\t} catch (error) {\n\t\t\t// Don't throw on errors - just log debug message\n\t\t\tlogger.debug(`markProjectAsConfigured: Failed to create marker file: ${error}`)\n\t\t}\n\t}\n\n\t/**\n\t * Check if this is the first run of the feature\n\t * Returns true if marker file doesn't exist\n\t * Handles errors gracefully by returning true (treat as first-run on error)\n\t */\n\tasync isFirstRun(): Promise<boolean> {\n\t\tlogger.debug('isFirstRun: Checking for marker file', { markerFilePath: this.markerFilePath })\n\t\ttry {\n\t\t\tconst exists = await fs.pathExists(this.markerFilePath)\n\t\t\tlogger.debug(`isFirstRun: Marker file exists=${exists}`)\n\t\t\treturn !exists\n\t\t} catch (error) {\n\t\t\t// On error, gracefully degrade by treating as first-run\n\t\t\tlogger.debug(`isFirstRun: Error checking marker file, treating as first-run: ${error}`)\n\t\t\treturn true\n\t\t}\n\t}\n\n\t/**\n\t * Mark the feature as having been run\n\t * Creates the marker file in config directory\n\t * Handles errors gracefully without throwing\n\t */\n\tasync markAsRun(): Promise<void> {\n\t\tlogger.debug('markAsRun: Attempting to create marker file', { markerFilePath: this.markerFilePath })\n\t\ttry {\n\t\t\t// Ensure directory exists\n\t\t\tconst configDir = path.dirname(this.markerFilePath)\n\t\t\tlogger.debug(`markAsRun: Ensuring config directory exists: ${configDir}`)\n\t\t\tawait fs.ensureDir(configDir)\n\n\t\t\t// Write marker file with timestamp for debugging\n\t\t\tconst markerContent = {\n\t\t\t\tfirstRun: new Date().toISOString(),\n\t\t\t}\n\t\t\tawait fs.writeFile(this.markerFilePath, JSON.stringify(markerContent, null, 2), 'utf8')\n\t\t\tlogger.debug('markAsRun: Marker file created successfully')\n\t\t} catch (error) {\n\t\t\t// Don't throw on errors - just log debug message\n\t\t\t// Failing to write marker shouldn't break the workflow\n\t\t\tlogger.debug(`markAsRun: Failed to create marker file: ${error}`)\n\t\t}\n\t}\n}\n","import path from 'path'\nimport os from 'os'\nimport { getRepoInfo } from './github.js'\nimport { logger } from './logger.js'\nimport type { IloomSettings } from '../lib/SettingsManager.js'\nimport type { LoomMetadata } from '../lib/MetadataManager.js'\n\n/**\n * Generate MCP configuration for issue management\n * Uses a single server that can handle both issues and pull requests\n * Returns array of MCP server config objects\n * @param contextType - Optional context type (issue or pr)\n * @param repo - Optional repo in \"owner/repo\" format. If not provided, will auto-detect from git.\n * @param provider - Issue management provider (default: 'github')\n * @param settings - Optional settings to extract Linear API token from\n * @param draftPrNumber - Optional draft PR number for github-draft-pr mode (routes comments to PR)\n */\nexport async function generateIssueManagementMcpConfig(\n\tcontextType?: 'issue' | 'pr',\n\trepo?: string,\n\tprovider: 'github' | 'linear' = 'github',\n\tsettings?: IloomSettings,\n\tdraftPrNumber?: number\n): Promise<Record<string, unknown>[]> {\n\t// When draftPrNumber is provided (github-draft-pr mode), force contextType to 'pr'\n\t// This ensures agents route comments to the draft PR instead of the issue\n\tconst effectiveContextType = draftPrNumber ? 'pr' : contextType\n\n\t// Build provider-specific environment variables\n\tlet envVars: Record<string, string> = {\n\t\tISSUE_PROVIDER: provider,\n\t}\n\n\t// Add draft PR number to env vars if provided\n\tif (draftPrNumber) {\n\t\tenvVars.DRAFT_PR_NUMBER = String(draftPrNumber)\n\t}\n\n\tif (provider === 'github') {\n\t\t// Get repository information for GitHub - either from provided repo string or auto-detect\n\t\tlet owner: string\n\t\tlet name: string\n\n\t\tif (repo) {\n\t\t\tconst parts = repo.split('/')\n\t\t\tif (parts.length !== 2 || !parts[0] || !parts[1]) {\n\t\t\t\tthrow new Error(`Invalid repo format: ${repo}. Expected \"owner/repo\"`)\n\t\t\t}\n\t\t\towner = parts[0]\n\t\t\tname = parts[1]\n\t\t} else {\n\t\t\tconst repoInfo = await getRepoInfo()\n\t\t\towner = repoInfo.owner\n\t\t\tname = repoInfo.name\n\t\t}\n\n\t\t// Map logical types to GitHub's webhook event names (handle GitHub's naming quirk here)\n\t\t// Use effectiveContextType which may be overridden by draftPrNumber\n\t\tconst githubEventName = effectiveContextType === 'issue' ? 'issues' : effectiveContextType === 'pr' ? 'pull_request' : undefined\n\n\t\tenvVars = {\n\t\t\t...envVars,\n\t\t\tREPO_OWNER: owner,\n\t\t\tREPO_NAME: name,\n\t\t\tGITHUB_API_URL: 'https://api.github.com/',\n\t\t\t...(githubEventName && { GITHUB_EVENT_NAME: githubEventName }),\n\t\t}\n\n\t\tlogger.debug('Generated MCP config for GitHub issue management', {\n\t\t\tprovider,\n\t\t\trepoOwner: owner,\n\t\t\trepoName: name,\n\t\t\tcontextType: effectiveContextType ?? 'auto-detect',\n\t\t\tgithubEventName: githubEventName ?? 'auto-detect',\n\t\t\tdraftPrNumber: draftPrNumber ?? undefined,\n\t\t})\n\t} else {\n\t\t// Linear needs API token passed through\n\t\tconst apiToken = settings?.issueManagement?.linear?.apiToken ?? process.env.LINEAR_API_TOKEN\n\n\t\tif (apiToken) {\n\t\t\tenvVars.LINEAR_API_TOKEN = apiToken\n\t\t}\n\n\t\tlogger.debug('Generated MCP config for Linear issue management', {\n\t\t\tprovider,\n\t\t\thasApiToken: !!apiToken,\n\t\t\tcontextType: contextType ?? 'auto-detect',\n\t\t})\n\t}\n\n\t// Generate single MCP server config\n\tconst mcpServerConfig = {\n\t\tmcpServers: {\n\t\t\tissue_management: {\n\t\t\t\ttransport: 'stdio',\n\t\t\t\tcommand: 'node',\n\t\t\t\targs: [path.join(path.dirname(new globalThis.URL(import.meta.url).pathname), '../dist/mcp/issue-management-server.js')],\n\t\t\t\tenv: envVars,\n\t\t\t},\n\t\t},\n\t}\n\n\treturn [mcpServerConfig]\n}\n\n/**\n * Reuse MetadataManager.slugifyPath() algorithm for recap file naming\n *\n * Algorithm:\n * 1. Trim trailing slashes\n * 2. Replace all path separators (/ or \\) with ___ (triple underscore)\n * 3. Replace any other non-alphanumeric characters (except _ and -) with -\n * 4. Append .json\n */\nfunction slugifyPath(loomPath: string): string {\n\tlet slug = loomPath.replace(/[/\\\\]+$/, '')\n\tslug = slug.replace(/[/\\\\]/g, '___')\n\tslug = slug.replace(/[^a-zA-Z0-9_-]/g, '-')\n\treturn `${slug}.json`\n}\n\n/**\n * Generate MCP configuration for recap server\n *\n * The recap server captures session context (goal, decisions, insights, risks, assumptions)\n * for the VS Code Loom Context Panel.\n *\n * @param loomPath - Absolute path to the loom workspace\n * @param loomMetadata - The loom metadata object (will be stringified as JSON)\n */\nexport function generateRecapMcpConfig(\n\tloomPath: string,\n\tloomMetadata: LoomMetadata\n): Record<string, unknown>[] {\n\t// Compute recap file path using slugifyPath algorithm (same as MetadataManager)\n\tconst recapsDir = path.join(os.homedir(), '.config', 'iloom-ai', 'recaps')\n\tconst recapFilePath = path.join(recapsDir, slugifyPath(loomPath))\n\n\t// Pass both env vars:\n\t// - RECAP_FILE_PATH: where to read/write recap data\n\t// - LOOM_METADATA_JSON: stringified loom metadata (parsed by MCP using LoomMetadata type)\n\tconst envVars = {\n\t\tRECAP_FILE_PATH: recapFilePath,\n\t\tLOOM_METADATA_JSON: JSON.stringify(loomMetadata),\n\t}\n\n\tlogger.debug('Generated MCP config for recap server', {\n\t\tloomPath,\n\t\trecapFilePath,\n\t\tloomMetadataDescription: loomMetadata.description,\n\t})\n\n\treturn [\n\t\t{\n\t\t\tmcpServers: {\n\t\t\t\trecap: {\n\t\t\t\t\ttransport: 'stdio',\n\t\t\t\t\tcommand: 'node',\n\t\t\t\t\targs: [\n\t\t\t\t\t\tpath.join(\n\t\t\t\t\t\t\tpath.dirname(new globalThis.URL(import.meta.url).pathname),\n\t\t\t\t\t\t\t'../dist/mcp/recap-server.js'\n\t\t\t\t\t\t),\n\t\t\t\t\t],\n\t\t\t\t\tenv: 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