@iloom/cli 0.10.1 → 0.11.0

package/dist/chunk-YRCEOQPX.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/lib/MetadataManager.ts"],"sourcesContent":["import path from 'path'\nimport os from 'os'\nimport fs from 'fs-extra'\nimport { getLogger } from '../utils/logger-context.js'\nimport type { ProjectCapability } from '../types/loom.js'\nimport type { ComplexityOverride, OneShotMode } from '../types/index.js'\n\nexport type SwarmState = 'pending' | 'in_progress' | 'code_review' | 'done' | 'failed'\n\n/**\n * Schema for metadata JSON file\n * Stored in ~/.config/iloom-ai/looms/\n */\nexport interface MetadataFile {\n  description: string\n  created_at?: string\n  version: number\n  // Additional metadata fields (v2)\n  branchName?: string\n  worktreePath?: string\n  issueType?: 'branch' | 'issue' | 'pr' | 'epic'\n  issueKey?: string // Canonical, properly-cased issue key (e.g., \"PROJ-123\")\n  issue_numbers?: string[]\n  pr_numbers?: string[]\n  issueTracker?: string\n  colorHex?: string // Stored hex color (e.g., \"#dcebff\") - robust against palette changes\n  sessionId?: string // Claude Code session ID for resume support\n  projectPath?: string // Main worktree path (project root) - enables project identification\n  issueUrls?: Record<string, string> // Map of issue ID to URL in the issue tracker\n  prUrls?: Record<string, string> // Map of PR number to URL in the issue tracker\n  draftPrNumber?: number // Draft PR number if github-draft-pr mode was used\n  oneShot?: OneShotMode // One-shot automation mode stored during loom creation\n  complexity?: ComplexityOverride // Complexity override stored during loom creation\n  capabilities?: ProjectCapability[] // Detected project capabilities\n  state?: SwarmState // Swarm mode lifecycle state\n  childIssueNumbers?: string[] // Child issue numbers for epic looms\n  parentLoom?: {\n    type: 'issue' | 'pr' | 'branch' | 'epic'\n    identifier: string | number\n    branchName: string\n    worktreePath: string\n    databaseBranch?: string\n  }\n  // Epic/swarm child issue data (populated during spin setup)\n  childIssues?: Array<{\n    number: string   // Prefixed: \"#123\" for GitHub, \"ENG-123\" for Linear\n    title: string\n    body: string\n    url: string\n  }>\n  dependencyMap?: Record<string, string[]> // issueNumber -> array of blocking issueNumbers\n  mcpConfigPath?: string // Path to per-loom MCP config file (for swarm claude -p commands)\n}\n\n/**\n * Input for writing metadata (all fields except version and created_at)\n * Note: issueTracker is required because every loom should have an associated\n * issue tracker provider (defaults to 'github' via IssueTrackerFactory)\n */\nexport interface WriteMetadataInput {\n  description: string\n  branchName: string\n  worktreePath: string\n  issueType: 'branch' | 'issue' | 'pr' | 'epic'\n  issueKey?: string // Canonical, properly-cased issue key (e.g., \"PROJ-123\")\n  issue_numbers: string[]\n  pr_numbers: string[]\n  issueTracker: string\n  colorHex: string // Hex color (e.g., \"#dcebff\") - robust against palette changes\n  sessionId: string // Claude Code session ID for resume support (required for new looms)\n  projectPath: string // Main worktree path (project root) - required for new looms\n  issueUrls: Record<string, string> // Map of issue ID to URL in the issue tracker\n  prUrls: Record<string, string> // Map of PR number to URL in the issue tracker\n  draftPrNumber?: number // Draft PR number for github-draft-pr mode\n  oneShot?: OneShotMode // One-shot automation mode to persist\n  complexity?: ComplexityOverride // Complexity override to persist\n  capabilities: ProjectCapability[] // Detected project capabilities (required for new looms)\n  state?: SwarmState // Swarm mode lifecycle state\n  childIssueNumbers?: string[] // Child issue numbers for epic looms\n  parentLoom?: {\n    type: 'issue' | 'pr' | 'branch' | 'epic'\n    identifier: string | number\n    branchName: string\n    worktreePath: string\n    databaseBranch?: string\n  }\n  // Epic/swarm child issue data (populated during spin setup)\n  childIssues?: Array<{\n    number: string   // Prefixed: \"#123\" for GitHub, \"ENG-123\" for Linear\n    title: string\n    body: string\n    url: string\n  }>\n  dependencyMap?: Record<string, string[]> // issueNumber -> array of blocking issueNumbers\n  mcpConfigPath?: string // Path to per-loom MCP config file (for swarm claude -p commands)\n}\n\n/**\n * Result of reading metadata for a worktree\n */\nexport interface LoomMetadata {\n  status?: 'active' | 'finished'\n  finishedAt?: string | null\n  description: string\n  created_at: string | null\n  branchName: string | null\n  worktreePath: string | null\n  issueType: 'branch' | 'issue' | 'pr' | 'epic' | null\n  issueKey: string | null // Canonical, properly-cased issue key (e.g., \"PROJ-123\")\n  issue_numbers: string[]\n  pr_numbers: string[]\n  issueTracker: string | null\n  colorHex: string | null // Hex color (e.g., \"#dcebff\") - robust against palette changes\n  sessionId: string | null // Claude Code session ID (null for legacy looms)\n  projectPath: string | null // Main worktree path (null for legacy looms)\n  issueUrls: Record<string, string> // Map of issue ID to URL ({} for legacy looms)\n  prUrls: Record<string, string> // Map of PR number to URL ({} for legacy looms)\n  draftPrNumber: number | null // Draft PR number (null if not draft mode)\n  oneShot: OneShotMode | null // One-shot mode (null for legacy looms)\n  complexity: ComplexityOverride | null // Complexity override (null when not overridden)\n  capabilities: ProjectCapability[] // Detected project capabilities (empty for legacy looms)\n  state: SwarmState | null // Swarm mode lifecycle state (null for non-swarm looms)\n  childIssueNumbers: string[] // Child issue numbers for epic looms (empty for non-epic looms)\n  parentLoom: {\n    type: 'issue' | 'pr' | 'branch' | 'epic'\n    identifier: string | number\n    branchName: string\n    worktreePath: string\n    databaseBranch?: string\n  } | null\n  // Epic/swarm child issue data (empty arrays/objects for non-epic looms)\n  childIssues: Array<{\n    number: string\n    title: string\n    body: string\n    url: string\n  }>\n  dependencyMap: Record<string, string[]>\n  mcpConfigPath: string | null // Path to per-loom MCP config file (null for non-swarm looms)\n}\n\n/**\n * MetadataManager: Manage loom metadata persistence\n *\n * Stores loom metadata in ~/.config/iloom-ai/looms/ directory.\n * Each worktree gets a JSON file named by slugifying its absolute path.\n *\n * Per spec section 2.2:\n * - Filename derived from worktree absolute path\n * - Path separators replaced with double underscores\n * - Non-alphanumeric chars (except _ and -) replaced with hyphens\n */\nexport class MetadataManager {\n  private readonly loomsDir: string\n  private readonly finishedDir: string\n\n  constructor() {\n    this.loomsDir = path.join(os.homedir(), '.config', 'iloom-ai', 'looms')\n    this.finishedDir = path.join(this.loomsDir, 'finished')\n  }\n\n  /**\n   * Convert MetadataFile to LoomMetadata with default values for optional fields\n   */\n  private toMetadata(data: MetadataFile): LoomMetadata {\n    return {\n      description: data.description,\n      created_at: data.created_at ?? null,\n      branchName: data.branchName ?? null,\n      worktreePath: data.worktreePath ?? null,\n      issueType: data.issueType ?? null,\n      issueKey: data.issueKey ?? null,\n      issue_numbers: data.issue_numbers ?? [],\n      pr_numbers: data.pr_numbers ?? [],\n      issueTracker: data.issueTracker ?? null,\n      colorHex: data.colorHex ?? null,\n      sessionId: data.sessionId ?? null,\n      projectPath: data.projectPath ?? null,\n      issueUrls: data.issueUrls ?? {},\n      prUrls: data.prUrls ?? {},\n      draftPrNumber: data.draftPrNumber ?? null,\n      oneShot: data.oneShot ?? null,\n      complexity: data.complexity ?? null,\n      capabilities: data.capabilities ?? [],\n      state: data.state ?? null,\n      childIssueNumbers: data.childIssueNumbers ?? [],\n      parentLoom: data.parentLoom ?? null,\n      childIssues: data.childIssues ?? [],\n      dependencyMap: data.dependencyMap ?? {},\n      mcpConfigPath: data.mcpConfigPath ?? null,\n    }\n  }\n\n  /**\n   * Convert worktree path to filename slug per spec section 2.2\n   *\n   * Algorithm:\n   * 1. Trim trailing slashes\n   * 2. Replace all path separators (/ or \\) with __ (double underscore)\n   * 3. Replace any other non-alphanumeric characters (except _ and -) with -\n   * 4. Append .json\n   *\n   * Example:\n   * - Worktree: /Users/jane/dev/repo\n   * - Filename: _Users__jane__dev__repo.json\n   */\n  slugifyPath(worktreePath: string): string {\n    // 1. Trim trailing slashes\n    let slug = worktreePath.replace(/[/\\\\]+$/, '')\n\n    // 2. Replace path separators with triple underscores\n    slug = slug.replace(/[/\\\\]/g, '___')\n\n    // 3. Replace non-alphanumeric chars (except _ and -) with hyphens\n    slug = slug.replace(/[^a-zA-Z0-9_-]/g, '-')\n\n    // 4. Append .json\n    return `${slug}.json`\n  }\n\n  /**\n   * Get the full path to the metadata file for a worktree\n   */\n  private getFilePath(worktreePath: string): string {\n    const filename = this.slugifyPath(worktreePath)\n    return path.join(this.loomsDir, filename)\n  }\n\n  /**\n   * Get the full path to the metadata file for a worktree (public API)\n   * Used by other services that need to reference the metadata file location\n   * (e.g., MCP servers that need to read loom context)\n   */\n  getMetadataFilePath(worktreePath: string): string {\n    return this.getFilePath(worktreePath)\n  }\n\n  /**\n   * Write metadata for a worktree (spec section 3.1)\n   *\n   * @param worktreePath - Absolute path to the worktree (used for file naming)\n   * @param input - Metadata to write (description plus additional fields)\n   */\n  async writeMetadata(worktreePath: string, input: WriteMetadataInput): Promise<void> {\n    try {\n      // 1. Ensure looms directory exists\n      await fs.ensureDir(this.loomsDir, { mode: 0o755 })\n\n      // 2. Create JSON content\n      const content: MetadataFile = {\n        description: input.description,\n        created_at: new Date().toISOString(),\n        version: 1,\n        branchName: input.branchName,\n        worktreePath: input.worktreePath,\n        issueType: input.issueType,\n        ...(input.issueKey && { issueKey: input.issueKey }),\n        issue_numbers: input.issue_numbers,\n        pr_numbers: input.pr_numbers,\n        issueTracker: input.issueTracker,\n        colorHex: input.colorHex,\n        sessionId: input.sessionId,\n        projectPath: input.projectPath,\n        issueUrls: input.issueUrls,\n        prUrls: input.prUrls,\n        capabilities: input.capabilities,\n        ...(input.draftPrNumber && { draftPrNumber: input.draftPrNumber }),\n        ...(input.oneShot && { oneShot: input.oneShot }),\n        ...(input.complexity && { complexity: input.complexity }),\n        ...(input.state && { state: input.state }),\n        ...(input.childIssueNumbers && input.childIssueNumbers.length > 0 && { childIssueNumbers: input.childIssueNumbers }),\n        ...(input.parentLoom && { parentLoom: input.parentLoom }),\n        ...(input.childIssues && input.childIssues.length > 0 && { childIssues: input.childIssues }),\n        ...(input.dependencyMap && Object.keys(input.dependencyMap).length > 0 && { dependencyMap: input.dependencyMap }),\n        ...(input.mcpConfigPath && { mcpConfigPath: input.mcpConfigPath }),\n      }\n\n      // 3. Write to slugified filename\n      const filePath = this.getFilePath(worktreePath)\n      await fs.writeFile(filePath, JSON.stringify(content, null, 2), { mode: 0o644 })\n\n      getLogger().debug(`Metadata written for worktree: ${worktreePath}`)\n    } catch (error) {\n      // Log warning but don't throw - metadata is supplementary\n      getLogger().warn(\n        `Failed to write metadata for worktree: ${error instanceof Error ? error.message : String(error)}`\n      )\n    }\n  }\n\n  /**\n   * Read metadata for a worktree (spec section 3.2)\n   *\n   * @param worktreePath - Absolute path to the worktree\n   * @returns The metadata object with all fields, or null if not found/invalid\n   */\n  async readMetadata(worktreePath: string): Promise<LoomMetadata | null> {\n    try {\n      const filePath = this.getFilePath(worktreePath)\n\n      // Check if file exists\n      if (!(await fs.pathExists(filePath))) {\n        return null\n      }\n\n      // Read and parse JSON\n      const content = await fs.readFile(filePath, 'utf8')\n      const data: MetadataFile = JSON.parse(content)\n\n      if (!data.description) {\n        return null\n      }\n\n      return this.toMetadata(data)\n    } catch (error) {\n      // Return null on any error (graceful degradation per spec)\n      getLogger().debug(\n        `Could not read metadata for worktree ${worktreePath}: ${error instanceof Error ? error.message : String(error)}`\n      )\n      return null\n    }\n  }\n\n  /**\n   * List all stored loom metadata files\n   *\n   * Returns an array of LoomMetadata objects for all valid metadata files\n   * in the looms directory. Invalid or unreadable files are skipped.\n   *\n   * @returns Array of LoomMetadata objects from all stored files\n   */\n  async listAllMetadata(): Promise<LoomMetadata[]> {\n    const results: LoomMetadata[] = []\n\n    try {\n      // Check if looms directory exists\n      if (!(await fs.pathExists(this.loomsDir))) {\n        return results\n      }\n\n      // Read all files in looms directory\n      const files = await fs.readdir(this.loomsDir)\n\n      // Filter to only .json files and read each\n      for (const file of files) {\n        if (!file.endsWith('.json')) {\n          continue\n        }\n\n        try {\n          const filePath = path.join(this.loomsDir, file)\n          const content = await fs.readFile(filePath, 'utf8')\n          const data: MetadataFile = JSON.parse(content)\n\n          // Skip files without required description field\n          if (!data.description) {\n            continue\n          }\n\n          results.push(this.toMetadata(data))\n        } catch (error) {\n          // Skip individual files that fail to parse (graceful degradation)\n          getLogger().debug(\n            `Skipping metadata file ${file}: ${error instanceof Error ? error.message : String(error)}`\n          )\n        }\n      }\n    } catch (error) {\n      // Log error but return empty array (graceful degradation)\n      getLogger().debug(\n        `Could not list metadata files: ${error instanceof Error ? error.message : String(error)}`\n      )\n    }\n\n    return results\n  }\n\n  /**\n   * Update existing metadata for a worktree by merging new fields\n   *\n   * Reads the existing metadata file, merges the provided updates,\n   * and writes back. Only provided fields are overwritten.\n   *\n   * @param worktreePath - Absolute path to the worktree\n   * @param updates - Partial metadata fields to merge\n   */\n  async updateMetadata(worktreePath: string, updates: Partial<MetadataFile>): Promise<void> {\n    try {\n      const filePath = this.getFilePath(worktreePath)\n\n      // Check if file exists\n      if (!(await fs.pathExists(filePath))) {\n        getLogger().warn(`No metadata file to update for worktree: ${worktreePath}`)\n        return\n      }\n\n      // Read existing data\n      const content = await fs.readFile(filePath, 'utf8')\n      const data: MetadataFile = JSON.parse(content)\n\n      // Merge updates\n      const merged = { ...data, ...updates }\n\n      // Write back\n      await fs.writeFile(filePath, JSON.stringify(merged, null, 2), { mode: 0o644 })\n\n      getLogger().debug(`Metadata updated for worktree: ${worktreePath}`)\n    } catch (error) {\n      getLogger().warn(\n        `Failed to update metadata for worktree: ${error instanceof Error ? error.message : String(error)}`\n      )\n      throw error\n    }\n  }\n\n  /**\n   * Delete metadata for a worktree (spec section 3.3)\n   *\n   * Idempotent: silently succeeds if file doesn't exist\n   * Non-fatal: logs warning on permission errors but doesn't throw\n   *\n   * @param worktreePath - Absolute path to the worktree\n   */\n  async deleteMetadata(worktreePath: string): Promise<void> {\n    try {\n      const filePath = this.getFilePath(worktreePath)\n\n      // Check if file exists - silently return if not\n      if (!(await fs.pathExists(filePath))) {\n        getLogger().debug(`No metadata file to delete for worktree: ${worktreePath}`)\n        return\n      }\n\n      // Delete the file\n      await fs.unlink(filePath)\n      getLogger().debug(`Metadata deleted for worktree: ${worktreePath}`)\n    } catch (error) {\n      // Log warning on permission error but don't throw (per spec section 3.3)\n      getLogger().warn(\n        `Failed to delete metadata for worktree: ${error instanceof Error ? error.message : String(error)}`\n      )\n    }\n  }\n\n  /**\n   * Archive metadata for a finished worktree\n   *\n   * Moves the metadata file to the finished/ subdirectory and adds\n   * status: 'finished' and finishedAt timestamp fields.\n   *\n   * Idempotent: silently succeeds if source file doesn't exist\n   * Non-fatal: logs warning on errors but doesn't throw\n   *\n   * @param worktreePath - Absolute path to the worktree\n   */\n  async archiveMetadata(worktreePath: string): Promise<void> {\n    try {\n      const filename = this.slugifyPath(worktreePath)\n      const sourcePath = path.join(this.loomsDir, filename)\n\n      // Check if source file exists - silently return if not (idempotent)\n      if (!(await fs.pathExists(sourcePath))) {\n        getLogger().debug(`No metadata file to archive for worktree: ${worktreePath}`)\n        return\n      }\n\n      // Read existing metadata\n      const content = await fs.readFile(sourcePath, 'utf8')\n      const data: MetadataFile = JSON.parse(content)\n\n      // Add finished status and timestamp\n      const finishedData = {\n        ...data,\n        status: 'finished' as const,\n        finishedAt: new Date().toISOString(),\n      }\n\n      // Ensure finished directory exists\n      await fs.ensureDir(this.finishedDir, { mode: 0o755 })\n\n      // Write to finished subdirectory\n      const destPath = path.join(this.finishedDir, filename)\n      await fs.writeFile(destPath, JSON.stringify(finishedData, null, 2), { mode: 0o644 })\n\n      // Delete original file\n      await fs.unlink(sourcePath)\n\n      getLogger().debug(`Metadata archived for worktree: ${worktreePath}`)\n    } catch (error) {\n      // Log warning but don't throw - archiving is supplementary\n      getLogger().warn(\n        `Failed to archive metadata for worktree: ${error instanceof Error ? error.message : String(error)}`\n      )\n    }\n  }\n\n  /**\n   * List all finished loom metadata files\n   *\n   * Returns an array of LoomMetadata objects for all finished looms\n   * in the finished/ subdirectory, sorted by finishedAt in descending order\n   * (most recently finished first).\n   *\n   * @returns Array of LoomMetadata objects from finished files, sorted by finishedAt desc\n   */\n  async listFinishedMetadata(): Promise<LoomMetadata[]> {\n    const results: LoomMetadata[] = []\n\n    try {\n      // Check if finished directory exists\n      if (!(await fs.pathExists(this.finishedDir))) {\n        return results\n      }\n\n      // Read all files in finished directory\n      const files = await fs.readdir(this.finishedDir)\n\n      // Filter to only .json files and read each\n      for (const file of files) {\n        if (!file.endsWith('.json')) {\n          continue\n        }\n\n        try {\n          const filePath = path.join(this.finishedDir, file)\n          const content = await fs.readFile(filePath, 'utf8')\n          const data = JSON.parse(content) as MetadataFile & { status?: string; finishedAt?: string }\n\n          // Skip files without required description field\n          if (!data.description) {\n            continue\n          }\n\n          const metadata = this.toMetadata(data)\n          // Add finished-specific fields\n          metadata.status = (data.status as 'active' | 'finished') ?? 'finished'\n          metadata.finishedAt = data.finishedAt ?? null\n\n          results.push(metadata)\n        } catch (error) {\n          // Skip individual files that fail to parse (graceful degradation)\n          getLogger().warn(\n            `Skipping finished metadata file ${file}: ${error instanceof Error ? error.message : String(error)}`\n          )\n        }\n      }\n\n      // Sort by finishedAt descending (most recently finished first)\n      results.sort((a, b) => {\n        const aTime = a.finishedAt ? new Date(a.finishedAt).getTime() : 0\n        const bTime = b.finishedAt ? new Date(b.finishedAt).getTime() : 0\n        return bTime - aTime\n      })\n    } catch (error) {\n      // Log error but return empty array (graceful degradation)\n      getLogger().warn(\n        `Could not list finished metadata files: ${error instanceof Error ? error.message : String(error)}`\n      )\n    }\n\n    return results\n  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package/dist/{chunk-6MLEBAYZ.js → chunk-ZAXRQLK3.js}

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import {
   logger
-} from "./chunk-VT4PDUYT.js";
+} from "./chunk-H2SSF24U.js";
 
 // src/utils/logger-context.ts
 import { AsyncLocalStorage } from "async_hooks";
@@ -17,4 +17,4 @@ export {
   getLogger,
   withLogger
 };
-//# sourceMappingURL=chunk-6MLEBAYZ.js.map
+//# sourceMappingURL=chunk-ZAXRQLK3.js.map

package/dist/{claude-7GGEWVEM.js → claude-ONQTDWV3.js}

@@ -7,9 +7,9 @@ import {
   getClaudeVersion,
   launchClaude,
   launchClaudeInNewTerminalWindow
-} from "./chunk-UR5DGNUO.js";
-import "./chunk-6MLEBAYZ.js";
-import "./chunk-VT4PDUYT.js";
+} from "./chunk-Y3RX7LZT.js";
+import "./chunk-ZAXRQLK3.js";
+import "./chunk-H2SSF24U.js";
 export {
   detectClaudeCli,
   generateBranchName,
@@ -19,4 +19,4 @@ export {
   launchClaude,
   launchClaudeInNewTerminalWindow
 };
-//# sourceMappingURL=claude-7GGEWVEM.js.map
+//# sourceMappingURL=claude-ONQTDWV3.js.map

package/dist/{cleanup-6PVAC4NI.js → cleanup-YOM6PQCN.js}

@@ -1,58 +1,59 @@
 #!/usr/bin/env node
 import {
   ResourceCleanup
-} from "./chunk-RJ3VBUFK.js";
-import "./chunk-LUKXJSRI.js";
+} from "./chunk-7FIXNAUO.js";
+import "./chunk-XXFSOVL3.js";
 import {
   CLIIsolationManager,
   DatabaseManager,
   EnvironmentManager,
   LoomManager
-} from "./chunk-ZNMPGMHY.js";
-import "./chunk-KVHIAWVT.js";
-import "./chunk-SWSJWA2S.js";
+} from "./chunk-XFQGI2E3.js";
+import "./chunk-ABVMUNCD.js";
+import "./chunk-NOMQ5RFG.js";
+import "./chunk-RMLADZRY.js";
 import "./chunk-4232AHNQ.js";
 import {
   ProcessManager
-} from "./chunk-G5V75JD5.js";
-import "./chunk-LLHXQS3C.js";
-import "./chunk-WWKOVDWC.js";
+} from "./chunk-5PNZBH6V.js";
 import {
   IdentifierParser
-} from "./chunk-63QWFWH3.js";
+} from "./chunk-UDCI3QTS.js";
+import "./chunk-YETJNRQM.js";
+import "./chunk-HLDY5S4C.js";
+import "./chunk-3GTUXW26.js";
+import "./chunk-NCPZYQ4B.js";
 import {
   createNeonProviderFromSettings
-} from "./chunk-P4O6EH46.js";
+} from "./chunk-VMZG66UV.js";
 import {
   TelemetryService
-} from "./chunk-RSYT7MVI.js";
+} from "./chunk-GMDSYLI6.js";
 import {
   GitWorktreeManager
-} from "./chunk-I5T677EA.js";
-import "./chunk-YETJNRQM.js";
-import "./chunk-YQ57ORTV.js";
-import "./chunk-FXDYIV3K.js";
-import "./chunk-UR5DGNUO.js";
-import "./chunk-4FGEGQW4.js";
+} from "./chunk-LE2NOUTN.js";
+import "./chunk-5LTID2AF.js";
+import "./chunk-LHDD4JHC.js";
+import "./chunk-NH3QZYE5.js";
+import {
+  promptConfirmation
+} from "./chunk-CV47VCMQ.js";
+import "./chunk-7OCGBJLR.js";
+import "./chunk-QVAA5KHK.js";
+import "./chunk-Y3RX7LZT.js";
+import "./chunk-3RXYOBME.js";
 import {
   SettingsManager
-} from "./chunk-7VHJNVLF.js";
+} from "./chunk-ET6A2JR4.js";
 import {
   MetadataManager
-} from "./chunk-KB64WNBZ.js";
-import "./chunk-HEXKPKCK.js";
-import "./chunk-KXDRI47U.js";
-import "./chunk-VG45TUYK.js";
+} from "./chunk-YRCEOQPX.js";
 import {
   getLogger
-} from "./chunk-6MLEBAYZ.js";
-import {
-  promptConfirmation
-} from "./chunk-7JDMYTFZ.js";
-import "./chunk-433MOLAU.js";
+} from "./chunk-ZAXRQLK3.js";
 import {
   loadEnvIntoProcess
-} from "./chunk-VT4PDUYT.js";
+} from "./chunk-H2SSF24U.js";
 
 // src/commands/cleanup.ts
 function trackLoomAbandoned(metadata) {
@@ -103,10 +104,10 @@ var CleanupCommand = class {
       cliIsolationManager
     );
     if (!this.loomManager) {
-      const { IssueTrackerFactory } = await import("./IssueTrackerFactory-NG53YX5S.js");
-      const { ClaudeContextManager } = await import("./ClaudeContextManager-66GR4BGM.js");
-      const { ProjectCapabilityDetector } = await import("./ProjectCapabilityDetector-5KSYUTBJ.js");
-      const { DefaultBranchNamingService } = await import("./BranchNamingService-25KSZAEM.js");
+      const { IssueTrackerFactory } = await import("./IssueTrackerFactory-XN6MQ4UN.js");
+      const { ClaudeContextManager } = await import("./ClaudeContextManager-SXDCWDJA.js");
+      const { ProjectCapabilityDetector } = await import("./ProjectCapabilityDetector-IC6NAFGY.js");
+      const { DefaultBranchNamingService } = await import("./BranchNamingService-XBCO747L.js");
       this.loomManager = new LoomManager(
         this.gitWorktreeManager,
         IssueTrackerFactory.create(settings),
@@ -310,7 +311,7 @@ var CleanupCommand = class {
     const { force, dryRun } = parsed.options;
     let parsedInput = await this.identifierParser.parseForPatternDetection(identifier);
     if (parsedInput.type === "branch" && parsedInput.branchName) {
-      const { extractIssueNumber } = await import("./git-GTLKAZRJ.js");
+      const { extractIssueNumber } = await import("./git-BXUD6CL5.js");
       const extractedNumber = extractIssueNumber(parsedInput.branchName);
       if (extractedNumber !== null) {
         parsedInput = {
@@ -540,4 +541,4 @@ var CleanupCommand = class {
 export {
   CleanupCommand
 };
-//# sourceMappingURL=cleanup-6PVAC4NI.js.map
+//# sourceMappingURL=cleanup-YOM6PQCN.js.map

package/dist/{cleanup-6PVAC4NI.js.map → cleanup-YOM6PQCN.js.map}

@@ -1 +1 @@
-{"version":3,"sources":["../src/commands/cleanup.ts"],"sourcesContent":["import { getLogger } from '../utils/logger-context.js'\nimport { GitWorktreeManager } from '../lib/GitWorktreeManager.js'\nimport { ResourceCleanup } from '../lib/ResourceCleanup.js'\nimport { ProcessManager } from '../lib/process/ProcessManager.js'\nimport { DatabaseManager } from '../lib/DatabaseManager.js'\nimport { EnvironmentManager } from '../lib/EnvironmentManager.js'\nimport { CLIIsolationManager } from '../lib/CLIIsolationManager.js'\nimport { SettingsManager } from '../lib/SettingsManager.js'\nimport { promptConfirmation } from '../utils/prompt.js'\nimport { IdentifierParser } from '../utils/IdentifierParser.js'\nimport { loadEnvIntoProcess } from '../utils/env.js'\nimport { createNeonProviderFromSettings } from '../utils/neon-helpers.js'\nimport { LoomManager } from '../lib/LoomManager.js'\nimport { TelemetryService } from '../lib/TelemetryService.js'\nimport { MetadataManager } from '../lib/MetadataManager.js'\nimport type { LoomMetadata } from '../lib/MetadataManager.js'\n\nfunction trackLoomAbandoned(metadata: LoomMetadata): void {\n\ttry {\n\t\tconst durationMinutes = metadata.created_at\n\t\t\t? Math.round((Date.now() - new Date(metadata.created_at).getTime()) / 60000)\n\t\t\t: 0\n\t\tTelemetryService.getInstance().track('loom.abandoned', {\n\t\t\tduration_minutes: isNaN(durationMinutes) ? 0 : durationMinutes,\n\t\t\tphase_reached: metadata.state ?? 'unknown',\n\t\t})\n\t} catch (error: unknown) {\n\t\tgetLogger().debug(`Failed to track loom.abandoned telemetry: ${error instanceof Error ? error.message : String(error)}`)\n\t}\n}\nimport type { CleanupOptions } from '../types/index.js'\nimport type { CleanupResult } from '../types/cleanup.js'\nimport type { ParsedInput } from './start.js'\n\n/**\n * Input structure for CleanupCommand.execute()\n */\nexport interface CleanupCommandInput {\n  identifier?: string\n  options: CleanupOptions\n}\n\n/**\n * Parsed and validated cleanup command input\n * Mode determines which cleanup operation to perform\n */\nexport interface ParsedCleanupInput {\n  mode: 'list' | 'single' | 'issue' | 'all'\n  identifier?: string\n  issueNumber?: string | number\n  branchName?: string\n  originalInput?: string\n  options: CleanupOptions\n}\n\n/**\n * Manages cleanup command execution with option parsing and validation\n * Follows the command pattern established by StartCommand\n *\n * This implementation handles ONLY parsing, validation, and mode determination.\n * Actual cleanup operations are deferred to subsequent sub-issues.\n */\nexport class CleanupCommand {\n  private readonly gitWorktreeManager: GitWorktreeManager\n  private resourceCleanup?: ResourceCleanup\n  private loomManager?: import('../lib/LoomManager.js').LoomManager\n  private readonly identifierParser: IdentifierParser\n\n  constructor(\n    gitWorktreeManager?: GitWorktreeManager,\n    resourceCleanup?: ResourceCleanup\n  ) {\n    // Load environment variables first\n    const envResult = loadEnvIntoProcess()\n    if (envResult.error) {\n      getLogger().debug(`Environment loading warning: ${envResult.error.message}`)\n    }\n    if (envResult.parsed) {\n      getLogger().debug(`Loaded ${Object.keys(envResult.parsed).length} environment variables`)\n    }\n\n    this.gitWorktreeManager = gitWorktreeManager ?? new GitWorktreeManager()\n\n    // Initialize ResourceCleanup with DatabaseManager and CLIIsolationManager\n    // ResourceCleanup will be initialized lazily with proper configuration\n    if (resourceCleanup) {\n      this.resourceCleanup = resourceCleanup\n    }\n\n    // Initialize IdentifierParser for pattern-based detection\n    this.identifierParser = new IdentifierParser(this.gitWorktreeManager)\n  }\n\n  /**\n   * Lazy initialization of ResourceCleanup and LoomManager with properly configured DatabaseManager\n   */\n  private async ensureResourceCleanup(): Promise<void> {\n    if (this.resourceCleanup && this.loomManager) {\n      return\n    }\n\n    const settingsManager = new SettingsManager()\n    const settings = await settingsManager.loadSettings()\n    const databaseUrlEnvVarName = settings.capabilities?.database?.databaseUrlEnvVarName ?? 'DATABASE_URL'\n\n    const environmentManager = new EnvironmentManager()\n    const neonProvider = createNeonProviderFromSettings(settings)\n    const databaseManager = new DatabaseManager(neonProvider, environmentManager, databaseUrlEnvVarName)\n    const cliIsolationManager = new CLIIsolationManager()\n\n    this.resourceCleanup ??= new ResourceCleanup(\n      this.gitWorktreeManager,\n      new ProcessManager(),\n      databaseManager,\n      cliIsolationManager\n    )\n\n    // Initialize LoomManager if not provided (for child loom detection)\n    if (!this.loomManager) {\n      const { IssueTrackerFactory } = await import('../lib/IssueTrackerFactory.js')\n      const { ClaudeContextManager } = await import('../lib/ClaudeContextManager.js')\n      const { ProjectCapabilityDetector } = await import('../lib/ProjectCapabilityDetector.js')\n      const { DefaultBranchNamingService } = await import('../lib/BranchNamingService.js')\n\n      this.loomManager = new LoomManager(\n        this.gitWorktreeManager,\n        IssueTrackerFactory.create(settings),\n        new DefaultBranchNamingService({ useClaude: true }),\n        environmentManager,\n        new ClaudeContextManager(),\n        new ProjectCapabilityDetector(),\n        cliIsolationManager,\n        settingsManager,\n        databaseManager\n      )\n    }\n  }\n\n  /**\n   * Check for child looms and exit gracefully if any exist\n   * Always checks the TARGET loom (the one being cleaned up), not the current directory's loom\n   *\n   * @param parsed - The parsed input identifying the loom being cleaned up\n   */\n  private async checkForChildLooms(parsed: ParsedCleanupInput): Promise<void> {\n    await this.ensureResourceCleanup()\n    if (!this.loomManager) {\n      throw new Error('Failed to initialize LoomManager')\n    }\n\n    // Determine which branch is being cleaned up based on parsed input\n    let targetBranch: string | undefined\n\n    if (parsed.branchName) {\n      targetBranch = parsed.branchName\n    } else if (parsed.mode === 'issue' && parsed.issueNumber !== undefined) {\n      // For issues, try to find the worktree by issue number to get the branch name\n      const worktree = await this.gitWorktreeManager.findWorktreeForIssue(parsed.issueNumber)\n      targetBranch = worktree?.branch\n    }\n\n    // If we can't determine the target branch, skip the check\n    if (!targetBranch) {\n      getLogger().debug(`Cannot determine target branch for child loom check`)\n      return\n    }\n\n    // Check if the TARGET loom has any child looms\n    const hasChildLooms = await this.loomManager.checkAndWarnChildLooms(targetBranch)\n    if (hasChildLooms) {\n      throw new Error('Cannot cleanup loom while child looms exist. Please \\'finish\\' or \\'cleanup\\' child looms first.')\n    }\n  }\n\n  /**\n   * Main entry point for the cleanup command\n   * Parses input, validates options, and determines operation mode\n   */\n  public async execute(input: CleanupCommandInput): Promise<CleanupResult | void> {\n    // Step 1: Parse input and determine mode\n    const parsed = this.parseInput(input)\n\n    // Step 2: Validate option combinations (fail fast before any delay)\n    this.validateInput(parsed)\n\n    // Note: JSON mode auto-skips routine confirmations (programmatic use can't interact)\n    // Safety checks still require --force to bypass (ResourceCleanup.validateWorktreeSafety throws errors)\n\n    // Step 3: Check for child looms AFTER parsing input\n    // This ensures we only block when cleaning the CURRENT loom (parent), not a child\n    await this.checkForChildLooms(parsed)\n\n    // Step 4: Handle deferred execution (after all validation passes)\n    if (input.options.defer) {\n      getLogger().info(`Waiting ${input.options.defer}ms before cleanup...`)\n      await new Promise(resolve => globalThis.setTimeout(resolve, input.options.defer))\n    }\n\n    // Step 5: Execute based on mode\n    getLogger().info(`Cleanup mode: ${parsed.mode}`)\n\n    if (parsed.mode === 'single') {\n      return await this.executeSingleCleanup(parsed)\n    } else if (parsed.mode === 'list') {\n      getLogger().info('Would list all worktrees')  // TODO: Implement in Sub-issue #2\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'list',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'all') {\n      getLogger().info('Would remove all worktrees')  // TODO: Implement in Sub-issue #5\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'all',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'issue') {\n      return await this.executeIssueCleanup(parsed)\n    }\n  }\n\n  /**\n   * Parse input to determine cleanup mode and extract relevant data\n   * Implements auto-detection: numeric input = issue number, non-numeric = branch name\n   *\n   * @private\n   */\n  private parseInput(input: CleanupCommandInput): ParsedCleanupInput {\n    const { identifier, options } = input\n\n    // Trim identifier if present\n    const trimmedIdentifier = identifier?.trim() ?? undefined\n\n    // Mode: List (takes priority - it's informational only)\n    if (options.list) {\n      const result: ParsedCleanupInput = {\n        mode: 'list',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: All (remove everything)\n    if (options.all) {\n      const result: ParsedCleanupInput = {\n        mode: 'all',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      if (options.issue !== undefined) {\n        result.issueNumber = options.issue\n      }\n      return result\n    }\n\n    // Mode: Explicit issue number via --issue flag\n    if (options.issue !== undefined) {\n      // Need to determine if identifier is branch or numeric to set branchName\n      if (trimmedIdentifier) {\n        const numericPattern = /^[0-9]+$/\n        if (!numericPattern.test(trimmedIdentifier)) {\n          // Identifier is a branch name with explicit --issue flag\n          return {\n            mode: 'issue',\n            issueNumber: options.issue,\n            branchName: trimmedIdentifier,\n            identifier: trimmedIdentifier,\n            originalInput: trimmedIdentifier,\n            options\n          }\n        }\n      }\n      const result: ParsedCleanupInput = {\n        mode: 'issue',\n        issueNumber: options.issue,\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: Auto-detect from identifier\n    if (!trimmedIdentifier) {\n      throw new Error('Missing required argument: identifier. Use --all to remove all worktrees or --list to list them.')\n    }\n\n    // Auto-detection: Check if identifier is purely numeric\n    // Pattern from bash script line 364: ^[0-9]+$\n    const numericPattern = /^[0-9]+$/\n    if (numericPattern.test(trimmedIdentifier)) {\n      // Numeric input = issue number\n      return {\n        mode: 'issue',\n        issueNumber: parseInt(trimmedIdentifier, 10),\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    } else {\n      // Non-numeric = branch name\n      return {\n        mode: 'single',\n        branchName: trimmedIdentifier,\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    }\n  }\n\n  /**\n   * Validate parsed input for option conflicts\n   * Throws descriptive errors for invalid option combinations\n   *\n   * @private\n   */\n  private validateInput(parsed: ParsedCleanupInput): void {\n    const { mode, options, branchName } = parsed\n\n    // Conflict: --list is informational only, incompatible with destructive operations\n    if (mode === 'list') {\n      if (options.all) {\n        throw new Error('Cannot use --list with --all (list is informational only)')\n      }\n      if (options.issue !== undefined) {\n        throw new Error('Cannot use --list with --issue (list is informational only)')\n      }\n      if (parsed.identifier) {\n        throw new Error('Cannot use --list with a specific identifier (list shows all worktrees)')\n      }\n    }\n\n    // Conflict: --all removes everything, can't combine with specific identifier or --issue\n    if (mode === 'all') {\n      if (parsed.identifier) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n      if (parsed.issueNumber !== undefined) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n    }\n\n    // Conflict: explicit --issue flag with branch name identifier\n    // (This prevents confusion when user provides both)\n    if (options.issue !== undefined && branchName) {\n      throw new Error('Cannot use --issue flag with branch name identifier. Use numeric identifier or --issue flag alone.')\n    }\n\n    // Note: --force and --dry-run are compatible with all modes (no conflicts)\n  }\n\n  /**\n   * Execute cleanup for single worktree\n   * Implements two-stage confirmation: worktree removal, then branch deletion\n   * Uses IdentifierParser for pattern-based detection without GitHub API calls\n   */\n  private async executeSingleCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const identifier = parsed.branchName ?? parsed.identifier ?? ''\n    if (!identifier) {\n      throw new Error('No identifier found for cleanup')\n    }\n    const { force, dryRun } = parsed.options\n\n    // Step 1: Parse identifier using pattern-based detection\n    let parsedInput: ParsedInput = await this.identifierParser.parseForPatternDetection(identifier)\n\n    // If type is 'branch', try to extract issue number for CLI symlink cleanup\n    if (parsedInput.type === 'branch' && parsedInput.branchName) {\n      const { extractIssueNumber } = await import('../utils/git.js')\n      const extractedNumber = extractIssueNumber(parsedInput.branchName)\n      if (extractedNumber !== null) {\n        parsedInput = {\n          ...parsedInput,\n          number: extractedNumber  // Add number for CLI symlink cleanup\n        }\n      }\n    }\n\n    // Step 2: Display worktree details\n    getLogger().info(`Preparing to cleanup worktree: ${identifier}`)\n\n    // Step 3: Routine confirmation - worktree removal\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmWorktree = await promptConfirmation('Remove this worktree?', true)\n      if (!confirmWorktree) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier,\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 3.5: Read metadata BEFORE cleanup (cleanup deletes the worktree)\n    let preCleanupMetadata: LoomMetadata | null = null\n    try {\n      // Find worktree path for metadata lookup\n      const worktree = parsedInput.type === 'branch' && parsedInput.branchName\n        ? await this.gitWorktreeManager.findWorktreeForBranch(parsedInput.branchName)\n        : parsedInput.number !== undefined\n        ? await this.gitWorktreeManager.findWorktreeForIssue(parsedInput.number)\n        : null\n      if (worktree) {\n        const metadataManager = new MetadataManager()\n        preCleanupMetadata = await metadataManager.readMetadata(worktree.path)\n      }\n    } catch (error: unknown) {\n      getLogger().debug(`Failed to read metadata for telemetry: ${error instanceof Error ? error.message : String(error)}`)\n    }\n\n    // Step 4: Execute worktree cleanup (includes safety validation)\n    // Issue #275 fix: Run 5-point safety check BEFORE any deletion\n    // This prevents the scenario where worktree is deleted but branch deletion fails\n    await this.ensureResourceCleanup()\n    if (!this.resourceCleanup) {\n      throw new Error('Failed to initialize ResourceCleanup')\n    }\n    const cleanupResult = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n      dryRun: dryRun ?? false,\n      force: force ?? false,\n      deleteBranch: true,  // Always include branch deletion (safety checks run first)\n      keepDatabase: false,\n      checkMergeSafety: true,  // Run 5-point safety check BEFORE any deletion\n      archive: parsed.options.archive ?? false,\n    })\n\n    // Add dryRun flag to result\n    cleanupResult.dryRun = dryRun ?? false\n\n    // Step 5: Report cleanup results\n    this.reportCleanupResults(cleanupResult)\n\n    // Track loom.abandoned telemetry event (only for unfinished looms)\n    if (cleanupResult.success && preCleanupMetadata && preCleanupMetadata.status !== 'finished') {\n      trackLoomAbandoned(preCleanupMetadata)\n    }\n\n    // Final success message\n    if (cleanupResult.success) {\n      getLogger().success('Cleanup completed successfully')\n    } else {\n      getLogger().warn('Cleanup completed with errors - see details above')\n    }\n\n    return cleanupResult\n  }\n\n  /**\n   * Report cleanup operation results to user\n   */\n  private reportCleanupResults(result: CleanupResult): void {\n    getLogger().info('Cleanup operations:')\n\n    result.operations.forEach(op => {\n      const status = op.success ? '✓' : '✗'\n      const message = op.error ? `${op.message}: ${op.error}` : op.message\n\n      if (op.success) {\n        getLogger().info(`  ${status} ${message}`)\n      } else {\n        getLogger().error(`  ${status} ${message}`)\n      }\n    })\n\n    if (result.errors.length > 0) {\n      getLogger().warn(`${result.errors.length} error(s) occurred during cleanup`)\n    }\n  }\n\n  /**\n   * Execute cleanup for all worktrees associated with an issue or PR number\n   * Searches for worktrees by their path patterns (e.g., issue-25, pr-25, 25-feature, _pr_25)\n   * Implements bash cleanup-worktree.sh remove_worktrees_by_issue() (lines 157-242)\n   */\n  private async executeIssueCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const issueNumber = parsed.issueNumber\n    if (issueNumber === undefined) {\n      throw new Error('No issue/PR number provided for cleanup')\n    }\n\n    const { force, dryRun } = parsed.options\n\n    getLogger().info(`Finding worktrees related to issue/PR #${issueNumber}...`)\n\n    // Step 1: Get all worktrees and filter by path pattern\n    const worktrees = await this.gitWorktreeManager.listWorktrees()\n    const matchingWorktrees = worktrees.filter(wt => {\n      const path = wt.path.toLowerCase()\n      // Lowercase for case-insensitive matching (Linear IDs are uppercase like MARK-1)\n      const idStr = String(issueNumber).toLowerCase()\n\n      // Check if path contains the identifier with proper word boundaries\n      // Matches: issue-25, pr-25, 25-feature, _pr_25, issue-mark-1, etc.\n      // Uses word boundary or common separators (-, _, /) for alphanumeric IDs\n      const pattern = new RegExp(`(?:^|[/_-])${idStr}(?:[/_-]|$)`)\n      return pattern.test(path)\n    })\n\n    if (matchingWorktrees.length === 0) {\n      getLogger().warn(`No worktrees found for issue/PR #${issueNumber}`)\n      getLogger().info(`Searched for worktree paths containing: ${issueNumber}, _pr_${issueNumber}, issue-${issueNumber}, etc.`)\n      return {\n        identifier: String(issueNumber),\n        success: true,\n        dryRun: dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    }\n\n    // Step 2: Build targets list from matching worktrees\n    const targets: Array<{ branchName: string; hasWorktree: boolean; worktreePath?: string }> =\n      matchingWorktrees.map(wt => ({\n        branchName: wt.branch,\n        hasWorktree: true,\n        worktreePath: wt.path\n      }))\n\n    // Step 3: Display preview\n    getLogger().info(`Found ${targets.length} worktree(s) related to issue/PR #${issueNumber}:`)\n    for (const target of targets) {\n      getLogger().info(`  Branch: ${target.branchName} (${target.worktreePath})`)\n    }\n\n    // Step 4: Routine batch confirmation\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks per-worktree (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmCleanup = await promptConfirmation(\n        `Remove ${targets.length} worktree(s)?`,\n        true\n      )\n      if (!confirmCleanup) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier: String(issueNumber),\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 5: Process each target sequentially\n    let worktreesRemoved = 0\n    let branchesDeleted = 0\n    const databaseBranchesDeletedList: string[] = []\n    let failed = 0\n\n    for (const target of targets) {\n      getLogger().info(`Processing worktree: ${target.branchName}`)\n\n      // Cleanup worktree using ResourceCleanup with ParsedInput\n      // Now includes branch deletion with 5-point safety check BEFORE any deletion\n      try {\n        // Read metadata BEFORE cleanup for telemetry\n        let targetMetadata: LoomMetadata | null = null\n        if (target.worktreePath) {\n          try {\n            const metadataManager = new MetadataManager()\n            targetMetadata = await metadataManager.readMetadata(target.worktreePath)\n          } catch (error: unknown) {\n            getLogger().debug(`Failed to read metadata for telemetry: ${error instanceof Error ? error.message : String(error)}`)\n          }\n        }\n\n        // Use the known issue number directly instead of parsing from branch name\n        // This ensures CLI symlinks (created with issue number) are properly cleaned up\n        const parsedInput: ParsedInput = {\n          type: 'issue',\n          number: issueNumber,  // Use the known issue number, not parsed from branch\n          branchName: target.branchName,\n          originalInput: String(issueNumber)\n        }\n\n        await this.ensureResourceCleanup()\n        if (!this.resourceCleanup) {\n          throw new Error('Failed to initialize ResourceCleanup')\n        }\n        // Issue #275 fix: Run safety checks BEFORE deleting worktree\n        // This prevents the scenario where worktree is deleted but branch deletion fails\n        const result = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n          dryRun: dryRun ?? false,\n          force: force ?? false,\n          deleteBranch: true,  // Include branch deletion (with safety checks)\n          keepDatabase: false,\n          checkMergeSafety: true,  // Run 5-point safety check BEFORE any deletion\n          archive: parsed.options.archive ?? false,\n          ...(target.worktreePath && { worktree: { path: target.worktreePath, branch: target.branchName } }),\n        })\n\n        if (result.success) {\n          worktreesRemoved++\n          getLogger().success(`  Worktree removed: ${target.branchName}`)\n\n          // Check if branch was deleted\n          const branchOperation = result.operations.find(op => op.type === 'branch')\n          if (branchOperation?.success) {\n            branchesDeleted++\n            getLogger().success(`  Branch deleted: ${target.branchName}`)\n          }\n\n          // Check if database branch was actually deleted (use explicit deleted field)\n          const dbOperation = result.operations.find(op => op.type === 'database')\n          if (dbOperation?.deleted) {\n            // Get branch name from result or use the target branch name\n            const deletedBranchName = target.branchName\n            databaseBranchesDeletedList.push(deletedBranchName)\n          }\n\n          // Track loom.abandoned telemetry (only for unfinished looms)\n          if (targetMetadata && targetMetadata.status !== 'finished') {\n            trackLoomAbandoned(targetMetadata)\n          }\n        } else {\n          failed++\n          getLogger().error(`  Failed to remove worktree: ${target.branchName}`)\n          for (const err of result.errors) {\n            getLogger().error(`    ${err.message}`)\n          }\n        }\n      } catch (error) {\n        failed++\n        const errMsg = error instanceof Error ? error.message : 'Unknown error'\n        getLogger().error(`  Failed to cleanup: ${errMsg}`)\n        continue // Continue with next worktree even if this one failed\n      }\n    }\n\n    // Step 7: Report statistics\n    getLogger().success(`Completed cleanup for issue/PR #${issueNumber}:`)\n    getLogger().info(`   Worktrees removed: ${worktreesRemoved}`)\n    getLogger().info(`   Branches deleted: ${branchesDeleted}`)\n    if (databaseBranchesDeletedList.length > 0) {\n      // Display branch names in the format requested\n      getLogger().info(`   Database branches deleted: ${databaseBranchesDeletedList.join(', ')}`)\n    }\n    if (failed > 0) {\n      getLogger().warn(`   Failed operations: ${failed}`)\n    }\n\n    // Return aggregated result\n    return {\n      identifier: String(issueNumber),\n      success: failed === 0,\n      dryRun: dryRun ?? false,\n      operations: [\n        { type: 'worktree' as const, success: true, message: `Removed ${worktreesRemoved} worktree(s)` },\n        { type: 'branch' as const, success: true, message: `Deleted ${branchesDeleted} branch(es)` },\n        ...(databaseBranchesDeletedList.length > 0 ? [{ type: 'database' as const, success: true, message: `Deleted ${databaseBranchesDeletedList.length} database branch(es)`, deleted: true }] : []),\n      ],\n      errors: [],\n      rollbackRequired: false,\n    }\n  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+{"version":3,"sources":["../src/commands/cleanup.ts"],"sourcesContent":["import { getLogger } from '../utils/logger-context.js'\nimport { GitWorktreeManager } from '../lib/GitWorktreeManager.js'\nimport { ResourceCleanup } from '../lib/ResourceCleanup.js'\nimport { ProcessManager } from '../lib/process/ProcessManager.js'\nimport { DatabaseManager } from '../lib/DatabaseManager.js'\nimport { EnvironmentManager } from '../lib/EnvironmentManager.js'\nimport { CLIIsolationManager } from '../lib/CLIIsolationManager.js'\nimport { SettingsManager } from '../lib/SettingsManager.js'\nimport { promptConfirmation } from '../utils/prompt.js'\nimport { IdentifierParser } from '../utils/IdentifierParser.js'\nimport { loadEnvIntoProcess } from '../utils/env.js'\nimport { createNeonProviderFromSettings } from '../utils/neon-helpers.js'\nimport { LoomManager } from '../lib/LoomManager.js'\nimport { TelemetryService } from '../lib/TelemetryService.js'\nimport { MetadataManager } from '../lib/MetadataManager.js'\nimport type { LoomMetadata } from '../lib/MetadataManager.js'\n\nfunction trackLoomAbandoned(metadata: LoomMetadata): void {\n\ttry {\n\t\tconst durationMinutes = metadata.created_at\n\t\t\t? Math.round((Date.now() - new Date(metadata.created_at).getTime()) / 60000)\n\t\t\t: 0\n\t\tTelemetryService.getInstance().track('loom.abandoned', {\n\t\t\tduration_minutes: isNaN(durationMinutes) ? 0 : durationMinutes,\n\t\t\tphase_reached: metadata.state ?? 'unknown',\n\t\t})\n\t} catch (error: unknown) {\n\t\tgetLogger().debug(`Failed to track loom.abandoned telemetry: ${error instanceof Error ? error.message : String(error)}`)\n\t}\n}\nimport type { CleanupOptions } from '../types/index.js'\nimport type { CleanupResult } from '../types/cleanup.js'\nimport type { ParsedInput } from './start.js'\n\n/**\n * Input structure for CleanupCommand.execute()\n */\nexport interface CleanupCommandInput {\n  identifier?: string\n  options: CleanupOptions\n}\n\n/**\n * Parsed and validated cleanup command input\n * Mode determines which cleanup operation to perform\n */\nexport interface ParsedCleanupInput {\n  mode: 'list' | 'single' | 'issue' | 'all'\n  identifier?: string\n  issueNumber?: string | number\n  branchName?: string\n  originalInput?: string\n  options: CleanupOptions\n}\n\n/**\n * Manages cleanup command execution with option parsing and validation\n * Follows the command pattern established by StartCommand\n *\n * This implementation handles ONLY parsing, validation, and mode determination.\n * Actual cleanup operations are deferred to subsequent sub-issues.\n */\nexport class CleanupCommand {\n  private readonly gitWorktreeManager: GitWorktreeManager\n  private resourceCleanup?: ResourceCleanup\n  private loomManager?: import('../lib/LoomManager.js').LoomManager\n  private readonly identifierParser: IdentifierParser\n\n  constructor(\n    gitWorktreeManager?: GitWorktreeManager,\n    resourceCleanup?: ResourceCleanup\n  ) {\n    // Load environment variables first\n    const envResult = loadEnvIntoProcess()\n    if (envResult.error) {\n      getLogger().debug(`Environment loading warning: ${envResult.error.message}`)\n    }\n    if (envResult.parsed) {\n      getLogger().debug(`Loaded ${Object.keys(envResult.parsed).length} environment variables`)\n    }\n\n    this.gitWorktreeManager = gitWorktreeManager ?? new GitWorktreeManager()\n\n    // Initialize ResourceCleanup with DatabaseManager and CLIIsolationManager\n    // ResourceCleanup will be initialized lazily with proper configuration\n    if (resourceCleanup) {\n      this.resourceCleanup = resourceCleanup\n    }\n\n    // Initialize IdentifierParser for pattern-based detection\n    this.identifierParser = new IdentifierParser(this.gitWorktreeManager)\n  }\n\n  /**\n   * Lazy initialization of ResourceCleanup and LoomManager with properly configured DatabaseManager\n   */\n  private async ensureResourceCleanup(): Promise<void> {\n    if (this.resourceCleanup && this.loomManager) {\n      return\n    }\n\n    const settingsManager = new SettingsManager()\n    const settings = await settingsManager.loadSettings()\n    const databaseUrlEnvVarName = settings.capabilities?.database?.databaseUrlEnvVarName ?? 'DATABASE_URL'\n\n    const environmentManager = new EnvironmentManager()\n    const neonProvider = createNeonProviderFromSettings(settings)\n    const databaseManager = new DatabaseManager(neonProvider, environmentManager, databaseUrlEnvVarName)\n    const cliIsolationManager = new CLIIsolationManager()\n\n    this.resourceCleanup ??= new ResourceCleanup(\n      this.gitWorktreeManager,\n      new ProcessManager(),\n      databaseManager,\n      cliIsolationManager\n    )\n\n    // Initialize LoomManager if not provided (for child loom detection)\n    if (!this.loomManager) {\n      const { IssueTrackerFactory } = await import('../lib/IssueTrackerFactory.js')\n      const { ClaudeContextManager } = await import('../lib/ClaudeContextManager.js')\n      const { ProjectCapabilityDetector } = await import('../lib/ProjectCapabilityDetector.js')\n      const { DefaultBranchNamingService } = await import('../lib/BranchNamingService.js')\n\n      this.loomManager = new LoomManager(\n        this.gitWorktreeManager,\n        IssueTrackerFactory.create(settings),\n        new DefaultBranchNamingService({ useClaude: true }),\n        environmentManager,\n        new ClaudeContextManager(),\n        new ProjectCapabilityDetector(),\n        cliIsolationManager,\n        settingsManager,\n        databaseManager\n      )\n    }\n  }\n\n  /**\n   * Check for child looms and exit gracefully if any exist\n   * Always checks the TARGET loom (the one being cleaned up), not the current directory's loom\n   *\n   * @param parsed - The parsed input identifying the loom being cleaned up\n   */\n  private async checkForChildLooms(parsed: ParsedCleanupInput): Promise<void> {\n    await this.ensureResourceCleanup()\n    if (!this.loomManager) {\n      throw new Error('Failed to initialize LoomManager')\n    }\n\n    // Determine which branch is being cleaned up based on parsed input\n    let targetBranch: string | undefined\n\n    if (parsed.branchName) {\n      targetBranch = parsed.branchName\n    } else if (parsed.mode === 'issue' && parsed.issueNumber !== undefined) {\n      // For issues, try to find the worktree by issue number to get the branch name\n      const worktree = await this.gitWorktreeManager.findWorktreeForIssue(parsed.issueNumber)\n      targetBranch = worktree?.branch\n    }\n\n    // If we can't determine the target branch, skip the check\n    if (!targetBranch) {\n      getLogger().debug(`Cannot determine target branch for child loom check`)\n      return\n    }\n\n    // Check if the TARGET loom has any child looms\n    const hasChildLooms = await this.loomManager.checkAndWarnChildLooms(targetBranch)\n    if (hasChildLooms) {\n      throw new Error('Cannot cleanup loom while child looms exist. Please \\'finish\\' or \\'cleanup\\' child looms first.')\n    }\n  }\n\n  /**\n   * Main entry point for the cleanup command\n   * Parses input, validates options, and determines operation mode\n   */\n  public async execute(input: CleanupCommandInput): Promise<CleanupResult | void> {\n    // Step 1: Parse input and determine mode\n    const parsed = this.parseInput(input)\n\n    // Step 2: Validate option combinations (fail fast before any delay)\n    this.validateInput(parsed)\n\n    // Note: JSON mode auto-skips routine confirmations (programmatic use can't interact)\n    // Safety checks still require --force to bypass (ResourceCleanup.validateWorktreeSafety throws errors)\n\n    // Step 3: Check for child looms AFTER parsing input\n    // This ensures we only block when cleaning the CURRENT loom (parent), not a child\n    await this.checkForChildLooms(parsed)\n\n    // Step 4: Handle deferred execution (after all validation passes)\n    if (input.options.defer) {\n      getLogger().info(`Waiting ${input.options.defer}ms before cleanup...`)\n      await new Promise(resolve => globalThis.setTimeout(resolve, input.options.defer))\n    }\n\n    // Step 5: Execute based on mode\n    getLogger().info(`Cleanup mode: ${parsed.mode}`)\n\n    if (parsed.mode === 'single') {\n      return await this.executeSingleCleanup(parsed)\n    } else if (parsed.mode === 'list') {\n      getLogger().info('Would list all worktrees')  // TODO: Implement in Sub-issue #2\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'list',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'all') {\n      getLogger().info('Would remove all worktrees')  // TODO: Implement in Sub-issue #5\n      getLogger().success('Command parsing and validation successful')\n      return {\n        identifier: 'all',\n        success: true,\n        dryRun: parsed.options.dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    } else if (parsed.mode === 'issue') {\n      return await this.executeIssueCleanup(parsed)\n    }\n  }\n\n  /**\n   * Parse input to determine cleanup mode and extract relevant data\n   * Implements auto-detection: numeric input = issue number, non-numeric = branch name\n   *\n   * @private\n   */\n  private parseInput(input: CleanupCommandInput): ParsedCleanupInput {\n    const { identifier, options } = input\n\n    // Trim identifier if present\n    const trimmedIdentifier = identifier?.trim() ?? undefined\n\n    // Mode: List (takes priority - it's informational only)\n    if (options.list) {\n      const result: ParsedCleanupInput = {\n        mode: 'list',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: All (remove everything)\n    if (options.all) {\n      const result: ParsedCleanupInput = {\n        mode: 'all',\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      if (options.issue !== undefined) {\n        result.issueNumber = options.issue\n      }\n      return result\n    }\n\n    // Mode: Explicit issue number via --issue flag\n    if (options.issue !== undefined) {\n      // Need to determine if identifier is branch or numeric to set branchName\n      if (trimmedIdentifier) {\n        const numericPattern = /^[0-9]+$/\n        if (!numericPattern.test(trimmedIdentifier)) {\n          // Identifier is a branch name with explicit --issue flag\n          return {\n            mode: 'issue',\n            issueNumber: options.issue,\n            branchName: trimmedIdentifier,\n            identifier: trimmedIdentifier,\n            originalInput: trimmedIdentifier,\n            options\n          }\n        }\n      }\n      const result: ParsedCleanupInput = {\n        mode: 'issue',\n        issueNumber: options.issue,\n        options\n      }\n      if (trimmedIdentifier) {\n        result.identifier = trimmedIdentifier\n      }\n      return result\n    }\n\n    // Mode: Auto-detect from identifier\n    if (!trimmedIdentifier) {\n      throw new Error('Missing required argument: identifier. Use --all to remove all worktrees or --list to list them.')\n    }\n\n    // Auto-detection: Check if identifier is purely numeric\n    // Pattern from bash script line 364: ^[0-9]+$\n    const numericPattern = /^[0-9]+$/\n    if (numericPattern.test(trimmedIdentifier)) {\n      // Numeric input = issue number\n      return {\n        mode: 'issue',\n        issueNumber: parseInt(trimmedIdentifier, 10),\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    } else {\n      // Non-numeric = branch name\n      return {\n        mode: 'single',\n        branchName: trimmedIdentifier,\n        identifier: trimmedIdentifier,\n        originalInput: trimmedIdentifier,\n        options\n      }\n    }\n  }\n\n  /**\n   * Validate parsed input for option conflicts\n   * Throws descriptive errors for invalid option combinations\n   *\n   * @private\n   */\n  private validateInput(parsed: ParsedCleanupInput): void {\n    const { mode, options, branchName } = parsed\n\n    // Conflict: --list is informational only, incompatible with destructive operations\n    if (mode === 'list') {\n      if (options.all) {\n        throw new Error('Cannot use --list with --all (list is informational only)')\n      }\n      if (options.issue !== undefined) {\n        throw new Error('Cannot use --list with --issue (list is informational only)')\n      }\n      if (parsed.identifier) {\n        throw new Error('Cannot use --list with a specific identifier (list shows all worktrees)')\n      }\n    }\n\n    // Conflict: --all removes everything, can't combine with specific identifier or --issue\n    if (mode === 'all') {\n      if (parsed.identifier) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n      if (parsed.issueNumber !== undefined) {\n        throw new Error('Cannot use --all with a specific identifier. Use one or the other.')\n      }\n    }\n\n    // Conflict: explicit --issue flag with branch name identifier\n    // (This prevents confusion when user provides both)\n    if (options.issue !== undefined && branchName) {\n      throw new Error('Cannot use --issue flag with branch name identifier. Use numeric identifier or --issue flag alone.')\n    }\n\n    // Note: --force and --dry-run are compatible with all modes (no conflicts)\n  }\n\n  /**\n   * Execute cleanup for single worktree\n   * Implements two-stage confirmation: worktree removal, then branch deletion\n   * Uses IdentifierParser for pattern-based detection without GitHub API calls\n   */\n  private async executeSingleCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const identifier = parsed.branchName ?? parsed.identifier ?? ''\n    if (!identifier) {\n      throw new Error('No identifier found for cleanup')\n    }\n    const { force, dryRun } = parsed.options\n\n    // Step 1: Parse identifier using pattern-based detection\n    let parsedInput: ParsedInput = await this.identifierParser.parseForPatternDetection(identifier)\n\n    // If type is 'branch', try to extract issue number for CLI symlink cleanup\n    if (parsedInput.type === 'branch' && parsedInput.branchName) {\n      const { extractIssueNumber } = await import('../utils/git.js')\n      const extractedNumber = extractIssueNumber(parsedInput.branchName)\n      if (extractedNumber !== null) {\n        parsedInput = {\n          ...parsedInput,\n          number: extractedNumber  // Add number for CLI symlink cleanup\n        }\n      }\n    }\n\n    // Step 2: Display worktree details\n    getLogger().info(`Preparing to cleanup worktree: ${identifier}`)\n\n    // Step 3: Routine confirmation - worktree removal\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmWorktree = await promptConfirmation('Remove this worktree?', true)\n      if (!confirmWorktree) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier,\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 3.5: Read metadata BEFORE cleanup (cleanup deletes the worktree)\n    let preCleanupMetadata: LoomMetadata | null = null\n    try {\n      // Find worktree path for metadata lookup\n      const worktree = parsedInput.type === 'branch' && parsedInput.branchName\n        ? await this.gitWorktreeManager.findWorktreeForBranch(parsedInput.branchName)\n        : parsedInput.number !== undefined\n        ? await this.gitWorktreeManager.findWorktreeForIssue(parsedInput.number)\n        : null\n      if (worktree) {\n        const metadataManager = new MetadataManager()\n        preCleanupMetadata = await metadataManager.readMetadata(worktree.path)\n      }\n    } catch (error: unknown) {\n      getLogger().debug(`Failed to read metadata for telemetry: ${error instanceof Error ? error.message : String(error)}`)\n    }\n\n    // Step 4: Execute worktree cleanup (includes safety validation)\n    // Issue #275 fix: Run 5-point safety check BEFORE any deletion\n    // This prevents the scenario where worktree is deleted but branch deletion fails\n    await this.ensureResourceCleanup()\n    if (!this.resourceCleanup) {\n      throw new Error('Failed to initialize ResourceCleanup')\n    }\n    const cleanupResult = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n      dryRun: dryRun ?? false,\n      force: force ?? false,\n      deleteBranch: true,  // Always include branch deletion (safety checks run first)\n      keepDatabase: false,\n      checkMergeSafety: true,  // Run 5-point safety check BEFORE any deletion\n      archive: parsed.options.archive ?? false,\n    })\n\n    // Add dryRun flag to result\n    cleanupResult.dryRun = dryRun ?? false\n\n    // Step 5: Report cleanup results\n    this.reportCleanupResults(cleanupResult)\n\n    // Track loom.abandoned telemetry event (only for unfinished looms)\n    if (cleanupResult.success && preCleanupMetadata && preCleanupMetadata.status !== 'finished') {\n      trackLoomAbandoned(preCleanupMetadata)\n    }\n\n    // Final success message\n    if (cleanupResult.success) {\n      getLogger().success('Cleanup completed successfully')\n    } else {\n      getLogger().warn('Cleanup completed with errors - see details above')\n    }\n\n    return cleanupResult\n  }\n\n  /**\n   * Report cleanup operation results to user\n   */\n  private reportCleanupResults(result: CleanupResult): void {\n    getLogger().info('Cleanup operations:')\n\n    result.operations.forEach(op => {\n      const status = op.success ? '✓' : '✗'\n      const message = op.error ? `${op.message}: ${op.error}` : op.message\n\n      if (op.success) {\n        getLogger().info(`  ${status} ${message}`)\n      } else {\n        getLogger().error(`  ${status} ${message}`)\n      }\n    })\n\n    if (result.errors.length > 0) {\n      getLogger().warn(`${result.errors.length} error(s) occurred during cleanup`)\n    }\n  }\n\n  /**\n   * Execute cleanup for all worktrees associated with an issue or PR number\n   * Searches for worktrees by their path patterns (e.g., issue-25, pr-25, 25-feature, _pr_25)\n   * Implements bash cleanup-worktree.sh remove_worktrees_by_issue() (lines 157-242)\n   */\n  private async executeIssueCleanup(parsed: ParsedCleanupInput): Promise<CleanupResult> {\n    const issueNumber = parsed.issueNumber\n    if (issueNumber === undefined) {\n      throw new Error('No issue/PR number provided for cleanup')\n    }\n\n    const { force, dryRun } = parsed.options\n\n    getLogger().info(`Finding worktrees related to issue/PR #${issueNumber}...`)\n\n    // Step 1: Get all worktrees and filter by path pattern\n    const worktrees = await this.gitWorktreeManager.listWorktrees()\n    const matchingWorktrees = worktrees.filter(wt => {\n      const path = wt.path.toLowerCase()\n      // Lowercase for case-insensitive matching (Linear IDs are uppercase like MARK-1)\n      const idStr = String(issueNumber).toLowerCase()\n\n      // Check if path contains the identifier with proper word boundaries\n      // Matches: issue-25, pr-25, 25-feature, _pr_25, issue-mark-1, etc.\n      // Uses word boundary or common separators (-, _, /) for alphanumeric IDs\n      const pattern = new RegExp(`(?:^|[/_-])${idStr}(?:[/_-]|$)`)\n      return pattern.test(path)\n    })\n\n    if (matchingWorktrees.length === 0) {\n      getLogger().warn(`No worktrees found for issue/PR #${issueNumber}`)\n      getLogger().info(`Searched for worktree paths containing: ${issueNumber}, _pr_${issueNumber}, issue-${issueNumber}, etc.`)\n      return {\n        identifier: String(issueNumber),\n        success: true,\n        dryRun: dryRun ?? false,\n        operations: [],\n        errors: [],\n        rollbackRequired: false,\n      }\n    }\n\n    // Step 2: Build targets list from matching worktrees\n    const targets: Array<{ branchName: string; hasWorktree: boolean; worktreePath?: string }> =\n      matchingWorktrees.map(wt => ({\n        branchName: wt.branch,\n        hasWorktree: true,\n        worktreePath: wt.path\n      }))\n\n    // Step 3: Display preview\n    getLogger().info(`Found ${targets.length} worktree(s) related to issue/PR #${issueNumber}:`)\n    for (const target of targets) {\n      getLogger().info(`  Branch: ${target.branchName} (${target.worktreePath})`)\n    }\n\n    // Step 4: Routine batch confirmation\n    // Skip if --force (user explicitly bypasses) or --json (programmatic use can't interact)\n    // Note: Safety checks per-worktree (uncommitted changes, unmerged work) still require --force to bypass\n    if (!force && !parsed.options.json) {\n      const confirmCleanup = await promptConfirmation(\n        `Remove ${targets.length} worktree(s)?`,\n        true\n      )\n      if (!confirmCleanup) {\n        getLogger().info('Cleanup cancelled')\n        return {\n          identifier: String(issueNumber),\n          success: false,\n          dryRun: dryRun ?? false,\n          operations: [],\n          errors: [],\n          rollbackRequired: false,\n        }\n      }\n    }\n\n    // Step 5: Process each target sequentially\n    let worktreesRemoved = 0\n    let branchesDeleted = 0\n    const databaseBranchesDeletedList: string[] = []\n    let failed = 0\n\n    for (const target of targets) {\n      getLogger().info(`Processing worktree: ${target.branchName}`)\n\n      // Cleanup worktree using ResourceCleanup with ParsedInput\n      // Now includes branch deletion with 5-point safety check BEFORE any deletion\n      try {\n        // Read metadata BEFORE cleanup for telemetry\n        let targetMetadata: LoomMetadata | null = null\n        if (target.worktreePath) {\n          try {\n            const metadataManager = new MetadataManager()\n            targetMetadata = await metadataManager.readMetadata(target.worktreePath)\n          } catch (error: unknown) {\n            getLogger().debug(`Failed to read metadata for telemetry: ${error instanceof Error ? error.message : String(error)}`)\n          }\n        }\n\n        // Use the known issue number directly instead of parsing from branch name\n        // This ensures CLI symlinks (created with issue number) are properly cleaned up\n        const parsedInput: ParsedInput = {\n          type: 'issue',\n          number: issueNumber,  // Use the known issue number, not parsed from branch\n          branchName: target.branchName,\n          originalInput: String(issueNumber)\n        }\n\n        await this.ensureResourceCleanup()\n        if (!this.resourceCleanup) {\n          throw new Error('Failed to initialize ResourceCleanup')\n        }\n        // Issue #275 fix: Run safety checks BEFORE deleting worktree\n        // This prevents the scenario where worktree is deleted but branch deletion fails\n        const result = await this.resourceCleanup.cleanupWorktree(parsedInput, {\n          dryRun: dryRun ?? false,\n          force: force ?? false,\n          deleteBranch: true,  // Include branch deletion (with safety checks)\n          keepDatabase: false,\n          checkMergeSafety: true,  // Run 5-point safety check BEFORE any deletion\n          archive: parsed.options.archive ?? false,\n          ...(target.worktreePath && { worktree: { path: target.worktreePath, branch: target.branchName } }),\n        })\n\n        if (result.success) {\n          worktreesRemoved++\n          getLogger().success(`  Worktree removed: ${target.branchName}`)\n\n          // Check if branch was deleted\n          const branchOperation = result.operations.find(op => op.type === 'branch')\n          if (branchOperation?.success) {\n            branchesDeleted++\n            getLogger().success(`  Branch deleted: ${target.branchName}`)\n          }\n\n          // Check if database branch was actually deleted (use explicit deleted field)\n          const dbOperation = result.operations.find(op => op.type === 'database')\n          if (dbOperation?.deleted) {\n            // Get branch name from result or use the target branch name\n            const deletedBranchName = target.branchName\n            databaseBranchesDeletedList.push(deletedBranchName)\n          }\n\n          // Track loom.abandoned telemetry (only for unfinished looms)\n          if (targetMetadata && targetMetadata.status !== 'finished') {\n            trackLoomAbandoned(targetMetadata)\n          }\n        } else {\n          failed++\n          getLogger().error(`  Failed to remove worktree: ${target.branchName}`)\n          for (const err of result.errors) {\n            getLogger().error(`    ${err.message}`)\n          }\n        }\n      } catch (error) {\n        failed++\n        const errMsg = error instanceof Error ? error.message : 'Unknown error'\n        getLogger().error(`  Failed to cleanup: ${errMsg}`)\n        continue // Continue with next worktree even if this one failed\n      }\n    }\n\n    // Step 7: Report statistics\n    getLogger().success(`Completed cleanup for issue/PR #${issueNumber}:`)\n    getLogger().info(`   Worktrees removed: ${worktreesRemoved}`)\n    getLogger().info(`   Branches deleted: ${branchesDeleted}`)\n    if (databaseBranchesDeletedList.length > 0) {\n      // Display branch names in the format requested\n      getLogger().info(`   Database branches deleted: ${databaseBranchesDeletedList.join(', ')}`)\n    }\n    if (failed > 0) {\n      getLogger().warn(`   Failed operations: ${failed}`)\n    }\n\n    // Return aggregated result\n    return {\n      identifier: String(issueNumber),\n      success: failed === 0,\n      dryRun: dryRun ?? false,\n      operations: [\n        { type: 'worktree' as const, success: true, message: `Removed ${worktreesRemoved} worktree(s)` },\n        { type: 'branch' as const, success: true, message: `Deleted ${branchesDeleted} branch(es)` },\n        ...(databaseBranchesDeletedList.length > 0 ? [{ type: 'database' as const, success: true, message: `Deleted ${databaseBranchesDeletedList.length} database branch(es)`, deleted: true }] : []),\n      ],\n      errors: [],\n      rollbackRequired: false,\n    }\n  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