@iebh/polyglot 4.7.0 → 4.7.2

package/lib/modules/engines/generic.js

@@ -232,6 +232,7 @@ var _default = {
             switch (engine) {
               case 'PubMed full':
               case 'PubMed abbreviation':
+              case 'Lilacs':
               //HTA
               case 'International HTA Database':
                 buffer += 'AND';
@@ -269,6 +270,7 @@ var _default = {
             switch (engine) {
               case 'PubMed full':
               case 'PubMed abbreviation':
+              case 'Lilacs':
               //HTA
               case 'International HTA Database':
                 buffer += 'AND';

package/lib/modules/global.js

@@ -58,7 +58,8 @@ var _default = {
         "PubMed abbreviation": 'randomized controlled trial[pt] OR controlled clinical trial[pt] OR randomized[tiab] OR randomised[tiab] OR placebo[tiab] OR "drug therapy"[sh] OR randomly[tiab] OR trial[tiab] OR groups[tiab] NOT (Animals[Mesh] not (Animals[Mesh] and Humans[Mesh]))',
         "Web of Science": 'TS=(random* or placebo* or allocat* or crossover* or "cross over" or ((singl* or doubl*) NEAR/1 blind*)) OR TI=(trial)',
         "WoS Advanced": 'TS=(random* or placebo* or allocat* or crossover* or "cross over" or ((singl* or doubl*) NEAR/1 blind*)) OR TI=(trial)',
-        "Business Source Ultimate": '(MH "Clinical Trials+") OR (MH "Quantitative Studies") OR TI placebo* OR AB placebo* OR (MH "Placebos") OR (MH "Random Assignment") OR TI random* OR AB random* OR TI ((singl* or doubl* or tripl* or trebl*) W1 (blind* or mask*)) OR AB ((singl* or doubl* or tripl* or trebl*) W1 (blind* or mask*)) OR TI clinic* trial* OR AB clinic* trial* OR PT clinical trial'
+        "Business Source Ultimate": '(MH "Clinical Trials+") OR (MH "Quantitative Studies") OR TI placebo* OR AB placebo* OR (MH "Placebos") OR (MH "Random Assignment") OR TI random* OR AB random* OR TI ((singl* or doubl* or tripl* or trebl*) W1 (blind* or mask*)) OR AB ((singl* or doubl* or tripl* or trebl*) W1 (blind* or mask*)) OR TI clinic* trial* OR AB clinic* trial* OR PT clinical trial',
+        "Lilacs": '(mh:("Randomized Controlled Trials as Topic" OR "Controlled Clinical Trials as Topic" OR "Random Allocation" OR "Double-Blind Method" OR "Single-Blind Method" OR "Placebos" OR "Multicenter Studies as Topic" OR "Cross-Over Studies" OR "Pragmatic Clinical Trials as Topic") OR pt:("Randomized Controlled Trial" OR "Controlled Clinical Trial" OR "Multicenter Studies" OR "Pragmatic Clinical Trial") OR ti:(random* OR aleatori* OR placebo*) OR (ti:("clinical trial" OR "ensayo clinico" OR "ensaio clinico") AND tw:(control* OR random* OR aleatori* OR placebo*)) OR (ti:("cross-Over" OR multicenter OR multicentric*) AND ti:(study OR studies OR estud*)) OR ab:(randomi* OR aleatori* OR placebo*) OR (ab:("clinical trial" OR "ensayo clinico" OR "ensaio clinico") AND tw:(control* OR random* OR aleatori* OR placebo*)) OR (ab:("cross-Over" OR multicenter OR multicentric*) AND ab:(study OR studies OR estud*)) OR (tw:(simple* OR singl* OR duplo* OR doble* OR doubl* OR trebl* OR tripl*) AND tw:(cego OR ciego OR blind OR mask OR dumm*))) AND NOT ((mh:"animals" AND NOT mh:"humans") OR mh:"Retrospective Studies")'
       }
     },
     'sr filter': {
@@ -73,7 +74,8 @@ var _default = {
         "PubMed abbreviation": 'search*[Title/Abstract] OR meta analysis[Publication Type] OR meta analysis[Title/Abstract] OR meta analysis[MeSH] OR review[Publication Type] OR diagnosis[MeSH Subheading] OR associated[Title/Abstract]',
         "Web of Science": 'Medline OR Pubmed OR (systematic AND review) OR meta-analysis OR Cochrane',
         "WoS Advanced": 'Medline OR Pubmed OR (systematic AND review) OR meta-analysis OR Cochrane',
-        "Business Source Ultimate": 'TI Medline AB Medline OR TI Pubmed AB Pubmed OR (TI systematic AB systematic AND TI review AB review) OR TI meta-analysis OR AB meta-analysis'
+        "Business Source Ultimate": 'TI Medline AB Medline OR TI Pubmed AB Pubmed OR (TI systematic AB systematic AND TI review AB review) OR TI meta-analysis OR AB meta-analysis',
+        "Lilacs": '(mh:("Systematic Reviews as Topic" OR "Meta-Analysis as Topic") OR pt:("systematic review" OR "meta-analysis") OR ti:("systematic review" OR "revisao sistematica" OR "revision sistematica" OR "systematic literature review" OR "systematic literature review" OR "systematic narrative review" OR "systematic qualitative review" OR "systematic evidence review" OR "systematic quantitative review" OR "systematic meta-review" OR "systematic critical review" OR "systematic mixed studies review" OR "systematic mixed methods" OR "systematic mapping review" OR "systematic cochrane review" OR "scoping review" OR "integrative review" OR "integrative literature review" OR "umbrella review" OR "rapid review" OR "meta-analysis" OR "meta-analise" OR metaanalise OR metanalise OR metaanalisis OR "meta-synthesis" OR "Metassintese") OR ab:("this systematic review" OR "esta revisao sistematica" OR "esta revision sistematica" OR "this meta-analysis" OR "esta meta-analise" OR "esta metaanalise" OR "esta metanalise" OR "esta metaanalisis" OR "this meta-synthesis" OR "esta metassintese") OR ta:"Cochrane Database Syst Rev")'
       }
     }
   }

package/lib/modules/parse.js

@@ -347,7 +347,8 @@ var parse = function parse(query, options) {
       // Mesh term - PubMed syntax
       leaf.type = 'mesh';
       leaf.field = match[2] ? 'Mesh search (Not exploded)' : 'Mesh search (exploded)';
-      if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       offset += match[0].length;
       q = q.substr(match[0].length);
       cropString = false;
@@ -360,7 +361,8 @@ var parse = function parse(query, options) {
         newLeaf.heading = match[2];
       }
       newLeaf.field = match[4] ? 'MeSH Major Topic search (Not exploded)' : 'MeSH Major Topic search (exploded)';
-      if (/^["“”].*["“”]$/.test(newLeaf.content)) newLeaf.content = newLeaf.content.substr(1, newLeaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(newLeaf.content)) newLeaf.content = newLeaf.content.substr(1, newLeaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       branch.nodes.push(newLeaf);
       offset += match[0].length;
       q = q.substr(match[0].length);
@@ -374,7 +376,8 @@ var parse = function parse(query, options) {
         newLeaf.heading = match[2];
       }
       newLeaf.field = match[4] ? 'MeSH Major Topic search (Not exploded)' : 'MeSH Major Topic search (exploded)';
-      if (/^["“”].*["“”]$/.test(newLeaf.content)) newLeaf.content = newLeaf.content.substr(1, newLeaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(newLeaf.content)) newLeaf.content = newLeaf.content.substr(1, newLeaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       branch.nodes.push(newLeaf);
       offset += match[0].length;
       q = q.substr(match[0].length);
@@ -383,7 +386,8 @@ var parse = function parse(query, options) {
       // Mesh subheading search - PubMed syntax
       leaf.type = 'mesh';
       leaf.field = 'MeSH subheading search';
-      if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       offset += match[0].length;
       q = q.substr(match[0].length);
       cropString = false;
@@ -397,7 +401,8 @@ var parse = function parse(query, options) {
       }
       leaf.type = 'mesh';
       useLeaf.field = 'MeSH subheading search';
-      if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       offset += match[0].length;
       q = q.substr(match[0].length);
       cropString = false;
@@ -411,7 +416,8 @@ var parse = function parse(query, options) {
       }
       leaf.type = 'mesh';
       useLeaf.field = match[1] === "xm" ? 'Mesh search (exploded)' : 'Mesh search (Not exploded)';
-      if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      // if (/^["“”].*["“”]$/.test(leaf.content)) leaf.content = leaf.content.substr(1, leaf.content.length - 2); // Remove wrapping '"' characters
+      if (/^["“”'‘’].*["“”'‘’]$/.test(leaf.content) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content[0]) && ['"', '“', '”', "'", '‘', '’'].includes(leaf.content.slice(-1))) leaf.content = leaf.content.slice(1, -1);
       offset += match[0].length;
       q = q.substr(match[0].length);
       cropString = false;
@@ -527,8 +533,8 @@ var parse = function parse(query, options) {
       var nextChar = q.substr(0, 1);
       if ((_lodash["default"].isUndefined(leaf) || _lodash["default"].isArray(leaf)) && nextChar != ' ') {
         // Leaf pointing to array entity - probably not created fallback leaf to append to
-        if (/^["“”]$/.test(nextChar) && (match = /^["“”](.*?)["“”]/.exec(q))) {
-          // First character is a speachmark - slurp until we see the next one
+        // if (/^["“”]$/.test(nextChar) && (match = /^["“”](.*?)["“”]/.exec(q))) { // First character is a speachmark - slurp until we see the next one
+        if (/^["“”'‘’]$/.test(nextChar) && (match = /^["“”'‘’](.*?)["“”'‘’]/.exec(q))) {
           leaf = {
             type: 'phrase',
             content: match[1],

package/lib/modules/tools.js

@@ -159,6 +159,7 @@ var tools = {
       case 'WoS Advanced':
       case 'Scopus (basic search)':
       case 'Scopus (advanced search)':
+      case 'Lilacs':
       //HTA
       case 'International HTA Database':
         number = "#" + ref;
@@ -201,6 +202,7 @@ var tools = {
             '#': settings.highlighting ? tools.createTooltip("*", "As PubMed does not single character wildcards a wildcard is used here", "highlight") : '*'
           };
           break;
+        case 'Lilacs':
         case 'Ovid MEDLINE':
           break;
         // Nothing needed
@@ -258,6 +260,11 @@ var tools = {
             '$': '#'
           };
           break;
+        // case 'Lilacs':
+        // 	replaceObj = {
+        // 		'$': '#'
+        // 	}
+        // 	break;
         case 'ProQuest Health and Medical':
           replaceObj = {
             '$': '?',

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@iebh/polyglot",
-  "version": "4.7.0",
+  "version": "4.7.2",
   "description": "IEBH-SRA tool to convert between different medical database search formats",
   "main": "lib/index.js",
   "scripts": {