@hviana/sema 0.1.4 → 0.1.6

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Files changed (58) hide show
  1. package/AGENTS.md +6 -5
  2. package/CITATION.cff +49 -0
  3. package/HOW_IT_WORKS.md +11 -12
  4. package/README.md +7 -5
  5. package/dist/example/train_base.js +13 -10
  6. package/dist/src/alu/src/index.js +1 -1
  7. package/dist/src/config.d.ts +16 -19
  8. package/dist/src/config.js +3 -8
  9. package/dist/src/index.d.ts +2 -2
  10. package/dist/src/index.js +2 -6
  11. package/dist/src/rabitq-ivf/src/database.d.ts +113 -0
  12. package/dist/src/rabitq-ivf/src/database.js +201 -0
  13. package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/index.d.ts +2 -5
  14. package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/index.js +1 -3
  15. package/dist/src/rabitq-ivf/src/ivf.d.ts +200 -0
  16. package/dist/src/rabitq-ivf/src/ivf.js +1165 -0
  17. package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/prng.d.ts +1 -1
  18. package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/prng.js +1 -1
  19. package/dist/src/store-sqlite.d.ts +26 -1
  20. package/dist/src/store-sqlite.js +190 -8
  21. package/dist/src/store.d.ts +2 -9
  22. package/dist/src/store.js +6 -23
  23. package/example/train_base.ts +13 -10
  24. package/package.json +2 -2
  25. package/src/alu/README.md +1 -1
  26. package/src/alu/src/index.ts +1 -1
  27. package/src/config.ts +19 -27
  28. package/src/index.ts +6 -11
  29. package/src/rabitq-ivf/README.md +56 -0
  30. package/src/rabitq-ivf/src/database.ts +276 -0
  31. package/src/{rabitq-hnsw → rabitq-ivf}/src/index.ts +2 -5
  32. package/src/rabitq-ivf/src/ivf.ts +1330 -0
  33. package/src/{rabitq-hnsw → rabitq-ivf}/src/prng.ts +1 -1
  34. package/src/store-sqlite.ts +196 -9
  35. package/src/store.ts +8 -32
  36. package/test/08-storage.test.mjs +3 -3
  37. package/test/14-scaling.test.mjs +2 -2
  38. package/test/35-ivf.test.mjs +263 -0
  39. package/test/36-bloom.test.mjs +123 -0
  40. package/dist/src/rabitq-hnsw/src/database.d.ts +0 -200
  41. package/dist/src/rabitq-hnsw/src/database.js +0 -388
  42. package/dist/src/rabitq-hnsw/src/heap.d.ts +0 -22
  43. package/dist/src/rabitq-hnsw/src/heap.js +0 -89
  44. package/dist/src/rabitq-hnsw/src/hnsw.d.ts +0 -125
  45. package/dist/src/rabitq-hnsw/src/hnsw.js +0 -474
  46. package/dist/src/rabitq-hnsw/src/store.d.ts +0 -162
  47. package/dist/src/rabitq-hnsw/src/store.js +0 -825
  48. package/dist/src/rabitq-hnsw/test/hnsw.test.d.ts +0 -1
  49. package/dist/src/rabitq-hnsw/test/hnsw.test.js +0 -948
  50. package/src/rabitq-hnsw/README.md +0 -303
  51. package/src/rabitq-hnsw/src/database.ts +0 -492
  52. package/src/rabitq-hnsw/src/heap.ts +0 -90
  53. package/src/rabitq-hnsw/src/hnsw.ts +0 -514
  54. package/src/rabitq-hnsw/src/store.ts +0 -994
  55. package/src/rabitq-hnsw/test/hnsw.test.ts +0 -1213
  56. /package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/rabitq.d.ts +0 -0
  57. /package/dist/src/{rabitq-hnsw → rabitq-ivf}/src/rabitq.js +0 -0
  58. /package/src/{rabitq-hnsw → rabitq-ivf}/src/rabitq.ts +0 -0
@@ -1,10 +1,7 @@
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  export { VectorDatabase } from "./database.js";
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  export type { DatabaseOptions, ExternalId, QueryResult, StorageStats, } from "./database.js";
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- export { HnswIndex } from "./hnsw.js";
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- export type { HnswParams, KnnHit } from "./hnsw.js";
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+ export { IvfIndex } from "./ivf.js";
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+ export type { IvfConfig, IvfHit } from "./ivf.js";
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  export { RaBitQuantizer } from "./rabitq.js";
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  export type { QueryContext, RaBitQOptions } from "./rabitq.js";
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- export { Store } from "./store.js";
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- export type { GlobalState, NodeRec, StoreConfig } from "./store.js";
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- export { Heap } from "./heap.js";
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  export { Prng } from "./prng.js";
@@ -1,6 +1,4 @@
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  export { VectorDatabase } from "./database.js";
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- export { HnswIndex } from "./hnsw.js";
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+ export { IvfIndex } from "./ivf.js";
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  export { RaBitQuantizer } from "./rabitq.js";
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- export { Store } from "./store.js";
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- export { Heap } from "./heap.js";
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  export { Prng } from "./prng.js";
@@ -0,0 +1,200 @@
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+ import { DatabaseSync } from "node:sqlite";
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+ export interface IvfConfig {
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+ dim: number;
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+ efSearch: number;
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+ queryBits: number;
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+ rotationRounds: number;
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+ seed: number;
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+ centroid: Float64Array | null;
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+ codeWords: number;
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+ paddedDim: number;
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+ }
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+ export interface IvfHit {
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+ /** external (user) id */
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+ id: number;
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+ /** estimated cosine distance (1 - cosine) */
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+ distance: number;
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+ }
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+ export declare class IvfIndex {
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+ readonly db: DatabaseSync;
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+ private readonly quantizer;
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+ private readonly codeBytes;
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+ private readonly chunkBytes;
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+ private _efSearch;
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+ /** Pivot codes, K × codeBytes, contiguous — the insert/query routing scan
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+ * is one linear pass over this array. */
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+ private centCodes;
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+ /** Aligned 32-bit word view of {@link centCodes} — the routing scan's
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+ * operand (4 bytes per XOR+popcount instead of byte re-composition). */
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+ private centWords;
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+ /** Per-cluster entry count (live + dead) — the split trigger. */
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+ private centEntries;
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+ /** Per-cluster chunk count (tail seq = count − 1). */
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+ private centChunks;
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+ private K;
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+ private live;
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+ private totalSlots;
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+ private nextId;
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+ /** Storage row reads (chunk blob fetches) — the cache-independent
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+ * scalability witness, same discipline as the graph index it replaces. */
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+ reads: number;
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+ lastQueryDistComps: number;
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+ lastQueryStorageReads: number;
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+ private readonly chunkCache;
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+ private readonly dirtyChunks;
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+ private readonly dirtyCents;
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+ private metaDirty;
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+ private readonly cacheEnabled;
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+ private readonly chunkCacheMax;
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+ private sSelChunk;
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+ private sUpsChunk;
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+ private sDelChunk;
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+ private sSelVmap;
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+ private sInsVmap;
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+ private sUpdVmap;
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+ private sDelVmap;
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+ private sUpsCent;
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+ private sMeta;
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+ constructor(dbPath: string, options: {
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+ dim?: number;
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+ efSearch?: number;
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+ queryBits?: number;
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+ rotationRounds?: number;
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+ seed?: number;
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+ centroid?: ArrayLike<number>;
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+ cacheSizeMb?: number;
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+ });
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+ readonly dim: number;
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+ private prepareAll;
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+ /** Load the pivot table into RAM — K rows, ~(codeBytes + 8) bytes each. */
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+ private loadCents;
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+ private growCents;
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+ get size(): number;
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+ get physicalSize(): number;
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+ get clusterCount(): number;
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+ get bytesPerVector(): number;
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+ get efSearch(): number;
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+ set efSearch(v: number);
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+ resetReads(): void;
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+ /** Fetch a chunk, serving dirty/cached copies first. `retain` controls
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+ * whether a clean fetch enters the cache — read-only consumers pass the
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+ * cacheEnabled flag so the `cacheSizeMb: 0` mode stays honestly uncached;
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+ * writers always retain (the copy is about to become dirty). */
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+ private chunkAt;
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+ private cacheChunk;
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+ private markDirty;
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+ /** Write every dirty chunk row; drop the clean cache only when retention
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+ * is off (no budget) — under a budget the warm set survives the flush.
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+ * Runs inside the caller's transaction. */
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+ private flushChunks;
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+ private flushCents;
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+ /** Persist all buffered state. MUST be called before the enclosing
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+ * transaction commits (upsertMany/deleteMany do; single-op paths too). */
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+ private flushAll;
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+ private static readonly SUPER_G;
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+ private static readonly SUPER_TOP;
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+ /** Majority super-pivot codes, one per group of SUPER_G clusters. */
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+ private superWords;
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+ /** Group ids whose super-pivot is stale (member pivot changed). */
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+ private readonly superStale;
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+ /** Scratch word view of the code being routed (avoids per-call copies). */
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+ private routeScratch;
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+ private markSuperStale;
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+ /** Recompute stale super-pivots (majority bit over member pivots). */
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+ private freshenSupers;
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+ /** Word-popcount Hamming between the routing scratch and a words-row. */
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+ private hamAt;
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+ /** Nearest cluster to a code — exact over member pivots of the SUPER_TOP
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+ * nearest super-groups (or over everything while K is small). Pure RAM,
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+ * no allocation, no storage reads. */
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+ private nearestCid;
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+ /** The nprobe nearest clusters to a QUERY (accurate estimator on pivots),
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+ * as cids ordered nearest-first. */
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+ private probeOrder;
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+ private probeOrderByCode;
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+ /** Whether an external id is present (live). */
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+ has(ext: number): boolean;
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+ /** The stored code for an ext (a copy), or null. */
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+ codeOf(ext: number): Uint8Array | null;
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+ /** Insert a code under `ext`. Caller owns the transaction; buffered rows
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+ * are flushed by {@link commitFlush}. Throws if ext is already live. */
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+ insert(ext: number, code: Uint8Array): void;
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+ /** Insert-or-update with ONE vmap probe. The point probe is a real cost
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+ * at bulk-load rates (statement dispatch + a B-tree descent per row —
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+ * profiled as the single largest insert-path term), so the presence check
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+ * and the update lookup share it. */
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+ upsert(ext: number, code: Uint8Array): void;
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+ /** The insert core — presence already established by the caller. */
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+ private insertNew;
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+ private newCluster;
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+ private appendToCluster;
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+ /** Tombstone a live ext. Returns false when absent. */
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+ remove(ext: number): boolean;
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+ /** Update the code bound to a live ext. A byte-identical code is a no-op
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+ * (content-addressed callers re-upsert unchanged vectors wholesale after a
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+ * restart; each no-op otherwise costs a tombstone + reinsert). */
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+ update(ext: number, code: Uint8Array): void;
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+ private updateAt;
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+ /** Flush buffered chunk/cent/meta rows. Call before COMMIT. */
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+ commitFlush(): void;
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+ /** Split a full cluster in two, deterministically. Dead slots are dropped
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+ * (splits double as incremental compaction). Both halves get fresh
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+ * majority-bit pivots, so routing sharpens as the corpus grows. */
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+ private split;
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+ /** Bit-majority sample size per split side. A pivot is a routing aid, not
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+ * a stored value: the majority bit of a 512-member deterministic sample
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+ * agrees with the full-population majority except on near-tied bits,
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+ * where either choice routes equally well — and counting every member of
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+ * a 4096-entry cluster was 25% of bulk-load CPU (profiled). */
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+ private static readonly MAJORITY_SAMPLE;
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+ /** Majority-bit code of the side's members (the binary centroid), or null
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+ * when the side is empty. Members are sampled on a deterministic stride
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+ * when the side exceeds {@link MAJORITY_SAMPLE}. */
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+ private majorityCode;
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+ /** Rewrite a cluster's chunks from a member list (one side of a split or a
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+ * compaction survivor set), updating vmap rows. `dropFrom` deletes any
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+ * leftover chunk rows beyond the new count. */
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+ private rebuildCluster;
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+ /** Multi-row vmap statements, prepared per row count (powers of a fixed
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+ * batch width) — REPLACE semantics on the ext primary key. */
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+ private readonly vmapBatchStmts;
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+ private static readonly VMAP_BATCH;
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+ private vmapBatchStmt;
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+ /** Write flat (ext, id, cid, seq, slot) tuples in wide batches. */
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+ private flushVmapRows;
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+ /** ef → clusters probed. ef is the familiar "candidate breadth" knob; a
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+ * probe scans one whole cluster, so nprobe = ef/4 keeps the default
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+ * (ef 64 → 16 probes) both accurate on trained stores and bounded. */
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+ private nprobeOf;
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+ /** k-NN with a full-precision query (accurate RaBitQ estimator). */
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+ searchKnn(vec: ArrayLike<number>, k: number, ef?: number): IvfHit[];
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+ /** k-NN with an already-quantized code (sign-bit Hamming distance). */
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+ searchKnnByCode(code: Uint8Array, k: number, ef?: number): IvfHit[];
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+ private scanClusters;
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+ /** Stream live entries whose internal id is > `after`, in id order.
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+ * Internal ids are monotone at insert and PRESERVED by update/compact, so
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+ * the largest id a caller has seen is a durable incremental watermark. */
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+ keysSince(after: number, batch?: number): IterableIterator<{
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+ ext: number;
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+ internal: number;
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+ }>;
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+ /** Stream every live external id. */
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+ keys(): IterableIterator<number>;
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+ /** Drop tombstoned slots by rewriting each cluster that carries any, then
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+ * VACUUM. Internal ids and cluster assignment are preserved — routing
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+ * quality is untouched, only dead space is reclaimed. */
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+ compact(): void;
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+ /** Heat SQLite's page cache with sequential scans of the chunk and vmap
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+ * tables — a cold session otherwise warms it through random point reads.
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+ * Purely a latency optimisation; returns rows touched. */
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+ warmCache(): number;
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+ begin(): void;
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+ commit(): void;
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+ rollback(): void;
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+ /** Encode a raw vector to its 1-bit code bytes. */
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+ encodeToBytes(vec: ArrayLike<number>): Uint8Array;
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+ codeToBytes(code: ArrayLike<number>): Uint8Array;
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+ bytesToCode(bytes: Uint8Array): Uint32Array;
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+ get codeWords(): number;
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+ close(): void;
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+ }