@hema-to/regl-scatterplot 1.14.1-hemato.3 → 1.16.0-hemato.0

package/src/kdbush.js

@@ -1,8 +1,6 @@
-// biome-ignore lint/style/useNamingConvention: KDBush is a library name
 import createKDBushClass from './kdbush-class.js';
 import workerFn from './kdbush-worker.js';
 
-// biome-ignore lint/style/useNamingConvention: KDBush is a library name
 const KDBush = createKDBushClass();
 const WORKER_THRESHOLD = 1000000;
 
@@ -10,7 +8,6 @@ const createWorker = (fn) => {
   const kdbushStr = createKDBushClass.toString();
   const fnStr = fn.toString();
   const workerStr =
-    // biome-ignore lint/style/useTemplate: Prefer one assignment per line
     `const createKDBushClass = ${kdbushStr};` +
     'KDBush = createKDBushClass();' +
     `const createWorker = ${fnStr};` +
@@ -66,4 +63,6 @@ const createKdbush = (
     }
   });
 
+export const kdbushFrom = (buffer) => KDBush.from(buffer);
+
 export default createKdbush;

package/src/lasso-manager/index.js

@@ -9,7 +9,12 @@ import {
   withConstructor,
   withStaticProperty,
 } from '@flekschas/utils';
-
+import {
+  DEFAULT_LASSO_LONG_PRESS_AFTER_EFFECT_TIME,
+  DEFAULT_LASSO_LONG_PRESS_EFFECT_DELAY,
+  DEFAULT_LASSO_LONG_PRESS_REVERT_EFFECT_TIME,
+  DEFAULT_LASSO_LONG_PRESS_TIME,
+} from '../constants.js';
 import {
   DEFAULT_BRUSH_SIZE,
   DEFAULT_LASSO_MIN_DELAY,
@@ -20,13 +25,6 @@ import {
   LASSO_SHOW_START_INITIATOR_TIME,
 } from './constants.js';
 
-import {
-  DEFAULT_LASSO_LONG_PRESS_AFTER_EFFECT_TIME,
-  DEFAULT_LASSO_LONG_PRESS_EFFECT_DELAY,
-  DEFAULT_LASSO_LONG_PRESS_REVERT_EFFECT_TIME,
-  DEFAULT_LASSO_LONG_PRESS_TIME,
-} from '../constants.js';
-
 import {
   createLongPressInAnimations,
   createLongPressOutAnimations,

package/src/renderer.js

@@ -65,10 +65,8 @@ export const createRenderer = (
     blend: {
       enable: true,
       func: {
-        // biome-ignore lint/style/useNamingConvention: Regl internal
         srcRGB: 'one',
         srcAlpha: 'one',
-        // biome-ignore lint/style/useNamingConvention: Regl internal
         dstRGB: 'one minus src alpha',
         dstAlpha: 'one minus src alpha',
       },

package/src/spline-curve-worker.js

@@ -106,7 +106,6 @@ const worker = function worker() {
    * @param   {[type]}  simplified  [description]
    * @return  {[type]}  [description]
    */
-  // biome-ignore lint/style/useNamingConvention: DP stands for Douglas Peucker
   const simplifyDPStep = (points, first, last, tolerance, simplified) => {
     let maxDist = tolerance;
     let index;
@@ -214,7 +213,6 @@ const worker = function worker() {
     const groupedPoints = {};
 
     const isOrdered = !Number.isNaN(+points[0][5]);
-    // biome-ignore lint/complexity/noForEach: somehow for .. of does not work in a worker
     points.forEach((point) => {
       const segId = point[4];
 
@@ -230,7 +228,6 @@ const worker = function worker() {
     });
 
     // The filtering ensures that non-existing array entries are removed
-    // biome-ignore lint/complexity/noForEach: somehow for .. of does not work in a worker
     Object.entries(groupedPoints).forEach((idPoints) => {
       groupedPoints[idPoints[0]] = idPoints[1].filter((v) => v);
       // Store the first point as the reference

package/src/types.d.ts

@@ -17,7 +17,6 @@ type MouseMode = 'panZoom' | 'lasso' | 'rotate';
 
 type PointScaleMode = 'constant' | 'asinh' | 'linear';
 
-// biome-ignore lint/style/useNamingConvention: ZWData are three words, z, w, and data
 type ZWDataType = 'continuous' | 'categorical';
 
 // biome-ignore lint/suspicious/noExplicitAny: Untyped external library
@@ -96,14 +95,12 @@ interface BaseAnnotation {
   lineWidth?: number;
 }
 
-// biome-ignore lint/style/useNamingConvention: HLine stands for HorizontalLine
 interface AnnotationHLine extends BaseAnnotation {
   y: number;
   x1?: number;
   x2?: number;
 }
 
-// biome-ignore lint/style/useNamingConvention: HLine stands for VerticalLine
 interface AnnotationVLine extends BaseAnnotation {
   x: number;
   y1?: number;
@@ -156,13 +153,13 @@ interface BaseOptions {
   aspectRatio: number;
   annotationLineColor: Color;
   annotationLineWidth: number;
-  // biome-ignore lint/style/useNamingConvention: HVLine stands for HorizontalVerticalLine
   annotationHVLineLimit: number;
   // Nullifiable
   backgroundImage: null | import('regl').Texture2D | string;
   colorBy: null | DataEncoding;
   sizeBy: null | DataEncoding;
   opacityBy: null | DataEncoding;
+  pointOrder: null | number[] | Int32Array | Uint32Array;
   xScale: null | Scale;
   yScale: null | Scale;
   pointScaleMode: PointScaleMode;
@@ -171,7 +168,6 @@ interface BaseOptions {
   pixelAligned: boolean;
 }
 
-// biome-ignore lint/style/useNamingConvention: KDBush is a library name
 export interface CreateKDBushOptions {
   node: number;
   useWorker: boolean;
@@ -295,7 +291,10 @@ export type Events = import('pub-sub-es').Event<
     { coordinates: number[] }
   > &
   import('pub-sub-es').Event<'pointOver' | 'pointOut', number> &
-  import('pub-sub-es').Event<'select' | 'focus', { points: number[]; lassoMode: LassoOptions["mode"]; }> &
+  import('pub-sub-es').Event<
+    'select' | 'focus',
+    { points: number[]; lassoMode: LassoOptions['mode'] }
+  > &
   import('pub-sub-es').Event<'points', { points: number[][] }> &
   import('pub-sub-es').Event<'transitionEnd', import('regl').Regl> &
   import('pub-sub-es').Event<

package/src/utils.js

@@ -85,7 +85,6 @@ export const dist = (x1, y1, x2, y2) =>
  * @return  {array}  Quadruple of form `[xMin, yMin, xMax, yMax]` defining the
  *  bounding box
  */
-// biome-ignore lint/style/useNamingConvention: BBox stands for BoundingBox
 export const getBBox = (positions2d) => {
   let xMin = Number.POSITIVE_INFINITY;
   let xMax = Number.NEGATIVE_INFINITY;
@@ -107,7 +106,6 @@ export const getBBox = (positions2d) => {
  * @param   {array}  bBox  The bounding box to be checked
  * @return  {array}  `true` if the bounding box is valid
  */
-// biome-ignore lint/style/useNamingConvention: BBox stands for BoundingBox
 export const isValidBBox = ([xMin, yMin, xMax, yMax]) =>
   Number.isFinite(xMin) &&
   Number.isFinite(yMin) &&
@@ -496,7 +494,6 @@ export const toArrayOrientedPoints = (points) =>
         (Array.isArray(points.line) || ArrayBuffer.isView(points.line)) &&
         ((i) => points.line[i]);
 
-      // biome-ignore lint/style/useNamingConvention: LO stands for line and order
       const getLO =
         (Array.isArray(points.lineOrder) ||
           ArrayBuffer.isView(points.lineOrder)) &&
@@ -578,9 +575,48 @@ export const isRect = (annotation) =>
   Number.isFinite(annotation.x2) &&
   Number.isFinite(annotation.x2);
 
-export const isPolygon = (annotation) =>
+export const isPolygonAnnotation = (annotation) =>
   'vertices' in annotation && annotation.vertices.length > 1;
 
+/**
+ * Check if an array is a valid list of 2D vertices
+ * @param {any} arg - The argument to check
+ * @returns {boolean} True if argument is an array of [x, y] coordinate pairs
+ */
+export const isVertices = (arg) => {
+  if (!Array.isArray(arg) || arg.length < 3) {
+    return false;
+  }
+
+  for (const vertex of arg) {
+    if (
+      !Array.isArray(vertex) ||
+      vertex.length !== 2 ||
+      typeof vertex[0] !== 'number' ||
+      typeof vertex[1] !== 'number'
+    ) {
+      return false;
+    }
+  }
+
+  return true;
+};
+
+/**
+ * Ensure a list of vertices forms a closed polygon
+ * @param {Array<[number, number]>} vertices - Array of [x, y] coordinates
+ * @returns {Array<[number, number]>} Closed polygon (first vertex repeated at end if needed)
+ */
+export const verticesToPolygon = (vertices) => {
+  const polygon = [...vertices];
+  const firstVertex = vertices.at(0);
+  const lastVertex = vertices.at(-1);
+  if (firstVertex[0] !== lastVertex[0] || firstVertex[1] !== lastVertex[1]) {
+    polygon.push(firstVertex);
+  }
+  return polygon;
+};
+
 export const insertionSort = (array) => {
   const end = array.length;
   for (let i = 1; i < end; i++) {