@helix-agent/core 0.4.0 → 0.5.0

package/dist/engine/gene-map.d.ts

@@ -6,13 +6,17 @@ export declare class GeneMap {
     private stmtList;
     private stmtCount;
     private stmtUpdatePlatforms;
+    private cache;
+    private cacheLoadedAt;
+    private readonly CACHE_TTL_MS;
     constructor(dbPath?: string);
+    private cacheKey;
+    private warmCache;
+    private isCacheStale;
     lookup(code: ErrorCode, category: FailureCategory): GeneCapsule | null;
     addPlatform(code: ErrorCode, category: FailureCategory, platform: Platform): void;
     store(gene: GeneCapsule): void;
-    /** RL update after successful repair */
     recordSuccess(code: string, category: string, repairMs: number): void;
-    /** RL update after failed repair */
     recordFailure(code: string, category: string): void;
     list(): GeneCapsule[];
     immuneCount(): number;
@@ -26,6 +30,26 @@ export declare class GeneMap {
             count: number;
         }[];
     };
+    seed(): {
+        seeded: number;
+    };
+    combine(): {
+        merged: number;
+    };
+    gc(): {
+        merged: number;
+        pruned: number;
+        archived: number;
+    };
+    generateRepairId(): string;
+    checkRepairInProgress(code: string, category: string): {
+        inProgress: boolean;
+        repairId?: string;
+        txHash?: string;
+    };
+    logRepairStart(repairId: string, code: string, category: string, strategy: string): void;
+    logRepairComplete(repairId: string, txHash?: string): void;
+    logRepairFailed(repairId: string): void;
     close(): void;
 }
 //# sourceMappingURL=gene-map.d.ts.map

package/dist/engine/gene-map.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"gene-map.d.ts","sourceRoot":"","sources":["../../src/engine/gene-map.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,eAAe,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AAsDpF,qBAAa,OAAO;IAClB,OAAO,CAAC,EAAE,CAAoB;IAC9B,OAAO,CAAC,UAAU,CAAqB;IACvC,OAAO,CAAC,UAAU,CAAqB;IACvC,OAAO,CAAC,QAAQ,CAAqB;IACrC,OAAO,CAAC,SAAS,CAAqB;IACtC,OAAO,CAAC,mBAAmB,CAAqB;IAGhD,OAAO,CAAC,KAAK,CAAmD;IAChE,OAAO,CAAC,aAAa,CAAK;IAC1B,OAAO,CAAC,QAAQ,CAAC,YAAY,CAAU;gBAE3B,MAAM,GAAE,MAAmB;IA2BvC,OAAO,CAAC,QAAQ;IAEhB,OAAO,CAAC,SAAS;IAQjB,OAAO,CAAC,YAAY;IAIpB,MAAM,CAAC,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe,GAAG,WAAW,GAAG,IAAI;IAsBtE,WAAW,CAAC,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe,EAAE,QAAQ,EAAE,QAAQ,GAAG,IAAI;IAWjF,KAAK,CAAC,IAAI,EAAE,WAAW,GAAG,IAAI;IAW9B,aAAa,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI;IAQrE,aAAa,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI;IAQnD,IAAI,IAAI,WAAW,EAAE;IACrB,WAAW,IAAI,MAAM;IAErB,cAAc,CAAC,WAAW,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,MAAM;IAM7D,KAAK;;;;;sBAKyM,MAAM;mBAA4B,MAAM;;;IAKtP,IAAI,IAAI;QAAE,MAAM,EAAE,MAAM,CAAA;KAAE;IAgB1B,OAAO,IAAI;QAAE,MAAM,EAAE,MAAM,CAAA;KAAE;IAkB7B,EAAE,IAAI;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,MAAM,CAAA;KAAE;IAU1D,gBAAgB,IAAI,MAAM;IAE1B,qBAAqB,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG;QAAE,UAAU,EAAE,OAAO,CAAC;QAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;QAAC,MAAM,CAAC,EAAE,MAAM,CAAA;KAAE;IAQlH,cAAc,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI;IAIxF,iBAAiB,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI;IAI1D,eAAe,CAAC,QAAQ,EAAE,MAAM,GAAG,IAAI;IAIvC,KAAK,IAAI,IAAI;CACd"}

package/dist/engine/gene-map.js

@@ -1,4 +1,5 @@
 import Database from 'better-sqlite3';
+import { SEED_GENES } from './seed-genes.js';
 const SCHEMA = `
 CREATE TABLE IF NOT EXISTS genes (
   id INTEGER PRIMARY KEY AUTOINCREMENT,
@@ -17,6 +18,18 @@ CREATE TABLE IF NOT EXISTS genes (
   last_used_at TEXT NOT NULL DEFAULT (datetime('now')),
   UNIQUE(failure_code, category)
 );
+
+CREATE TABLE IF NOT EXISTS repair_log (
+  id INTEGER PRIMARY KEY AUTOINCREMENT,
+  repair_id TEXT UNIQUE NOT NULL,
+  failure_code TEXT NOT NULL,
+  category TEXT NOT NULL,
+  strategy TEXT NOT NULL,
+  status TEXT NOT NULL DEFAULT 'pending',
+  tx_hash TEXT,
+  created_at DATETIME DEFAULT (datetime('now')),
+  completed_at DATETIME
+);
 `;
 function parseRow(row) {
     return {
@@ -43,42 +56,61 @@ export class GeneMap {
     stmtList;
     stmtCount;
     stmtUpdatePlatforms;
+    // L1 in-memory cache (OPT-9)
+    cache = new Map();
+    cacheLoadedAt = 0;
+    CACHE_TTL_MS = 30_000;
     constructor(dbPath = ':memory:') {
         this.db = new Database(dbPath);
         this.db.pragma('journal_mode = WAL');
         this.db.exec(SCHEMA);
-        this.stmtLookup = this.db.prepare(`
-      SELECT * FROM genes WHERE failure_code = ? AND category = ? ORDER BY q_value DESC LIMIT 1
-    `);
+        this.stmtLookup = this.db.prepare(`SELECT * FROM genes WHERE failure_code = ? AND category = ? ORDER BY q_value DESC LIMIT 1`);
         this.stmtUpsert = this.db.prepare(`
       INSERT INTO genes (failure_code, category, strategy, params, success_count, avg_repair_ms, platforms, q_value, consecutive_failures)
       VALUES (@failureCode, @category, @strategy, @params, @successCount, @avgRepairMs, @platforms, @qValue, @consecutiveFailures)
       ON CONFLICT(failure_code, category) DO UPDATE SET
-        strategy = @strategy,
-        params = @params,
+        strategy = @strategy, params = @params,
         success_count = success_count + 1,
         avg_repair_ms = (avg_repair_ms * success_count + @avgRepairMs) / (success_count + 1),
-        platforms = @platforms,
-        q_value = @qValue,
-        consecutive_failures = @consecutiveFailures,
+        platforms = @platforms, q_value = @qValue, consecutive_failures = @consecutiveFailures,
         last_used_at = datetime('now')
     `);
         this.stmtList = this.db.prepare(`SELECT * FROM genes ORDER BY q_value DESC, success_count DESC`);
         this.stmtCount = this.db.prepare(`SELECT COUNT(*) as count FROM genes`);
-        this.stmtUpdatePlatforms = this.db.prepare(`
-      UPDATE genes SET platforms = ?, last_used_at = datetime('now') WHERE failure_code = ? AND category = ?
-    `);
+        this.stmtUpdatePlatforms = this.db.prepare(`UPDATE genes SET platforms = ?, last_used_at = datetime('now') WHERE failure_code = ? AND category = ?`);
+        // Seed on first run + warm cache
+        this.seed();
+        this.warmCache();
+    }
+    // ── L1 Cache (OPT-9) ──
+    cacheKey(code, category) { return `${code}:${category}`; }
+    warmCache() {
+        this.cache.clear();
+        for (const row of this.db.prepare('SELECT * FROM genes').all()) {
+            this.cache.set(this.cacheKey(row.failure_code, row.category), row);
+        }
+        this.cacheLoadedAt = Date.now();
     }
+    isCacheStale() { return Date.now() - this.cacheLoadedAt > this.CACHE_TTL_MS; }
+    // ── Core CRUD ──
     lookup(code, category) {
+        const key = this.cacheKey(code, category);
+        // L1 cache hit
+        if (!this.isCacheStale() && this.cache.has(key)) {
+            const cached = this.cache.get(key);
+            this.db.prepare(`UPDATE genes SET last_used_at = datetime('now'), success_count = success_count + 1 WHERE failure_code = ? AND category = ?`).run(code, category);
+            const gene = parseRow(cached);
+            gene.successCount += 1;
+            return gene;
+        }
+        // L2: SQLite
         const row = this.stmtLookup.get(code, category);
         if (!row)
             return null;
-        this.db.prepare(`
-      UPDATE genes SET last_used_at = datetime('now'), success_count = success_count + 1
-      WHERE failure_code = ? AND category = ?
-    `).run(code, category);
+        this.db.prepare(`UPDATE genes SET last_used_at = datetime('now'), success_count = success_count + 1 WHERE failure_code = ? AND category = ?`).run(code, category);
+        this.cache.set(key, row);
         const gene = parseRow(row);
-        gene.successCount += 1; // reflect the bump we just did
+        gene.successCount += 1;
         return gene;
     }
     addPlatform(code, category, platform) {
@@ -89,92 +121,127 @@ export class GeneMap {
         if (!platforms.includes(platform)) {
             platforms.push(platform);
             this.stmtUpdatePlatforms.run(JSON.stringify(platforms), code, category);
+            this.cache.delete(this.cacheKey(code, category)); // invalidate
         }
     }
     store(gene) {
         this.stmtUpsert.run({
-            failureCode: gene.failureCode,
-            category: gene.category,
-            strategy: gene.strategy,
+            failureCode: gene.failureCode, category: gene.category, strategy: gene.strategy,
             params: JSON.stringify(gene.params, (_k, v) => typeof v === 'bigint' ? v.toString() : v),
-            successCount: gene.successCount,
-            avgRepairMs: gene.avgRepairMs,
+            successCount: gene.successCount, avgRepairMs: gene.avgRepairMs,
             platforms: JSON.stringify(gene.platforms),
-            qValue: gene.qValue ?? 0.5,
-            consecutiveFailures: gene.consecutiveFailures ?? 0,
+            qValue: gene.qValue ?? 0.5, consecutiveFailures: gene.consecutiveFailures ?? 0,
         });
+        this.cache.delete(this.cacheKey(gene.failureCode, gene.category)); // invalidate
     }
-    /** RL update after successful repair */
     recordSuccess(code, category, repairMs) {
         const row = this.stmtLookup.get(code, category);
         if (!row)
             return;
-        const alpha = 0.1;
-        const oldQ = row.q_value;
-        const newQ = oldQ + alpha * (1.0 - oldQ);
-        this.db.prepare(`
-      UPDATE genes SET
-        q_value = ?,
-        avg_repair_ms = (avg_repair_ms * success_count + ?) / (success_count + 1),
-        success_count = success_count + 1,
-        last_success_at = ?,
-        consecutive_failures = 0,
-        last_used_at = datetime('now')
-      WHERE failure_code = ? AND category = ?
-    `).run(newQ, repairMs, Date.now(), code, category);
+        const newQ = row.q_value + 0.1 * (1.0 - row.q_value);
+        this.db.prepare(`UPDATE genes SET q_value = ?, avg_repair_ms = (avg_repair_ms * success_count + ?) / (success_count + 1), success_count = success_count + 1, last_success_at = ?, consecutive_failures = 0, last_used_at = datetime('now') WHERE failure_code = ? AND category = ?`).run(newQ, repairMs, Date.now(), code, category);
+        this.cache.delete(this.cacheKey(code, category));
     }
-    /** RL update after failed repair */
     recordFailure(code, category) {
         const row = this.stmtLookup.get(code, category);
         if (!row)
             return;
-        const alpha = 0.1;
-        const oldQ = row.q_value;
-        const newQ = oldQ + alpha * (0.0 - oldQ);
-        this.db.prepare(`
-      UPDATE genes SET
-        q_value = ?,
-        last_failed_at = ?,
-        consecutive_failures = consecutive_failures + 1,
-        last_used_at = datetime('now')
-      WHERE failure_code = ? AND category = ?
-    `).run(newQ, Date.now(), code, category);
-    }
-    list() {
-        return this.stmtList.all().map(parseRow);
-    }
-    immuneCount() {
-        return this.stmtCount.get().count;
+        const newQ = row.q_value + 0.1 * (0.0 - row.q_value);
+        this.db.prepare(`UPDATE genes SET q_value = ?, last_failed_at = ?, consecutive_failures = consecutive_failures + 1, last_used_at = datetime('now') WHERE failure_code = ? AND category = ?`).run(newQ, Date.now(), code, category);
+        this.cache.delete(this.cacheKey(code, category));
     }
+    list() { return this.stmtList.all().map(parseRow); }
+    immuneCount() { return this.stmtCount.get().count; }
     getSuccessRate(failureCode, strategy) {
-        const row = this.db.prepare(`
-      SELECT success_count, q_value FROM genes WHERE failure_code = ? AND strategy = ?
-    `).get(failureCode, strategy);
+        const row = this.db.prepare(`SELECT success_count, q_value FROM genes WHERE failure_code = ? AND strategy = ?`).get(failureCode, strategy);
         if (!row || row.success_count < 3)
             return 0.5;
         return Math.min(0.5 + (row.success_count / 100), 0.95);
     }
     stats() {
         const rows = this.stmtList.all();
-        const allPlatforms = new Set();
+        const allP = new Set();
         let qSum = 0;
         for (const r of rows) {
             qSum += r.q_value;
             for (const p of JSON.parse(r.platforms))
-                allPlatforms.add(p);
+                allP.add(p);
+        }
+        return { totalGenes: rows.length, avgQValue: rows.length > 0 ? Math.round((qSum / rows.length) * 100) / 100 : 0, platforms: [...allP], topStrategies: rows.slice(0, 10).map(r => ({ strategy: r.strategy, count: r.success_count })) };
+    }
+    // ── Seed (D9: Cold Start) ──
+    seed() {
+        const cnt = this.db.prepare('SELECT COUNT(*) as cnt FROM genes').get().cnt;
+        if (cnt > 0)
+            return { seeded: 0 };
+        let seeded = 0;
+        const ins = this.db.prepare(`INSERT OR IGNORE INTO genes (failure_code, category, strategy, params, success_count, avg_repair_ms, platforms, q_value, consecutive_failures) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)`);
+        this.db.transaction(() => {
+            for (const g of SEED_GENES) {
+                ins.run(g.failureCode, g.category, g.strategy, JSON.stringify(g.params), g.successCount, g.avgRepairMs, JSON.stringify(g.platforms), g.qValue, g.consecutiveFailures);
+                seeded++;
+            }
+        })();
+        return { seeded };
+    }
+    // ── Gene Combine (OPT-3: ELL paper) ──
+    combine() {
+        let merged = 0;
+        const groups = this.db.prepare(`SELECT failure_code, category, COUNT(*) as cnt FROM genes GROUP BY failure_code, category HAVING cnt > 1`).all();
+        for (const g of groups) {
+            const genes = this.db.prepare(`SELECT * FROM genes WHERE failure_code = ? AND category = ? ORDER BY q_value DESC`).all(g.failure_code, g.category);
+            if (genes.length <= 1)
+                continue;
+            const best = genes[0];
+            const allP = new Set();
+            let totalSC = 0;
+            let weightedMs = 0;
+            for (const gn of genes) {
+                totalSC += gn.success_count;
+                weightedMs += gn.avg_repair_ms * gn.success_count;
+                for (const p of JSON.parse(gn.platforms))
+                    allP.add(p);
+            }
+            const maxQ = Math.max(...genes.map(gn => gn.q_value));
+            this.db.prepare(`UPDATE genes SET platforms = ?, success_count = ?, avg_repair_ms = ?, q_value = ?, last_used_at = datetime('now') WHERE id = ?`).run(JSON.stringify([...allP]), totalSC, weightedMs / Math.max(totalSC, 1), maxQ, best.id);
+            for (const gn of genes.slice(1)) {
+                this.db.prepare('DELETE FROM genes WHERE id = ?').run(gn.id);
+                merged++;
+            }
         }
-        return {
-            totalGenes: rows.length,
-            avgQValue: rows.length > 0 ? Math.round((qSum / rows.length) * 100) / 100 : 0,
-            platforms: [...allPlatforms],
-            topStrategies: rows.slice(0, 10).map(r => ({
-                strategy: r.strategy,
-                count: r.success_count,
-            })),
-        };
-    }
-    close() {
-        this.db.close();
+        if (merged > 0)
+            this.warmCache();
+        return { merged };
+    }
+    gc() {
+        const { merged } = this.combine();
+        const pruned = this.db.prepare(`DELETE FROM genes WHERE q_value < 0.1 AND consecutive_failures >= 3`).run().changes;
+        const archived = this.db.prepare(`SELECT COUNT(*) as cnt FROM genes WHERE last_used_at < datetime('now', '-180 days')`).get().cnt;
+        if (pruned > 0)
+            this.warmCache();
+        return { merged, pruned, archived };
+    }
+    // ── Idempotency (D5) ──
+    generateRepairId() { return `repair_${Date.now()}_${Math.random().toString(36).slice(2, 8)}`; }
+    checkRepairInProgress(code, category) {
+        const r = this.db.prepare(`SELECT repair_id, status, tx_hash FROM repair_log WHERE failure_code = ? AND category = ? AND status IN ('pending', 'completed') AND created_at > datetime('now', '-5 minutes') ORDER BY created_at DESC LIMIT 1`).get(code, category);
+        if (!r)
+            return { inProgress: false };
+        if (r.status === 'pending')
+            return { inProgress: true, repairId: r.repair_id };
+        if (r.status === 'completed' && r.tx_hash)
+            return { inProgress: true, repairId: r.repair_id, txHash: r.tx_hash };
+        return { inProgress: false };
+    }
+    logRepairStart(repairId, code, category, strategy) {
+        this.db.prepare(`INSERT OR IGNORE INTO repair_log (repair_id, failure_code, category, strategy, status) VALUES (?, ?, ?, ?, 'pending')`).run(repairId, code, category, strategy);
+    }
+    logRepairComplete(repairId, txHash) {
+        this.db.prepare(`UPDATE repair_log SET status = 'completed', tx_hash = ?, completed_at = datetime('now') WHERE repair_id = ?`).run(txHash ?? null, repairId);
+    }
+    logRepairFailed(repairId) {
+        this.db.prepare(`UPDATE repair_log SET status = 'failed', completed_at = datetime('now') WHERE repair_id = ?`).run(repairId);
     }
+    close() { this.db.close(); }
 }
 //# sourceMappingURL=gene-map.js.map

package/dist/engine/gene-map.js.map

@@ -1 +1 @@
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package/dist/engine/pcec.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"pcec.d.ts","sourceRoot":"","sources":["../../src/engine/pcec.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAIxC,OAAO,KAAK,EAEV,WAAW,EAEX,eAAe,EAEf,YAAY,EACZ,WAAW,EACZ,MAAM,YAAY,CAAC;AA8BpB,qBAAa,UAAU;IACrB,OAAO,CAAC,QAAQ,CAAyB;IACzC,OAAO,CAAC,OAAO,CAAU;IACzB,OAAO,CAAC,OAAO,CAAS;IACxB,OAAO,CAAC,QAAQ,CAAgB;IAChC,OAAO,CAAC,OAAO,CAAc;IACtB,KAAK;;;;MAAkD;IAC9D,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAM;IACjC,OAAO,CAAC,UAAU,CAAK;IACvB,0EAA0E;IAC1E,OAAO,CAAC,cAAc,CAAkF;gBAE5F,OAAO,EAAE,OAAO,EAAE,OAAO,GAAE,MAAkB,EAAE,OAAO,CAAC,EAAE,WAAW;IAOhF,OAAO,CAAC,eAAe;IAiBvB,eAAe,CAAC,OAAO,EAAE,eAAe,GAAG,IAAI;IAI/C,kFAAkF;IAClF,OAAO,CAAC,kBAAkB;IAS1B,OAAO,CAAC,QAAQ;IAsBhB,OAAO,CAAC,mBAAmB;YAWb,MAAM;IAyBd,MAAM,CAAC,KAAK,EAAE,KAAK,EAAE,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,OAAO,CAAC,YAAY,CAAC;IA4PpF,QAAQ;;;;;;;IAQR,UAAU,IAAI,OAAO;CAGtB"}

package/dist/engine/pcec.js

@@ -2,6 +2,7 @@ import { bus } from './bus.js';
 import { evaluate } from './evaluate.js';
 import { HelixProvider } from './provider.js';
 import { REVENUE_AT_RISK } from './types.js';
+import { getRootCause } from './root-causes.js';
 // Category C strategies that move funds — require 'full' mode
 const FUND_MOVEMENT_STRATEGIES = [
     'swap_currency', 'split_transaction', 'topup_from_reserve',
@@ -81,8 +82,12 @@ export class PcecEngine {
         }
         for (const adapter of this.adapters) {
             const result = adapter.perceive(error, context);
-            if (result)
+            if (result) {
+                const rc = getRootCause(result.code, result.category);
+                if (rc)
+                    result.rootCauseHint = rc.hint;
                 return result;
+            }
         }
         return {
             code: 'unknown', category: 'unknown', severity: 'medium',
@@ -240,9 +245,13 @@ export class PcecEngine {
             winner: winner.strategy, score: winner.score, platform: winner.platform,
             allScores: scored.map(c => ({ strategy: c.strategy, score: c.score })),
         });
-        // ── BUILD EXPLANATION ──
+        // ── BUILD EXPLANATION (with root cause hints OPT-7) ──
+        const rootCause = getRootCause(failure.code, failure.category);
         const explanation = [
             `Perceived: ${failure.code} → ${failure.category} [${failure.severity}] (${failure.platform})`,
+            rootCause ? `Root cause: ${rootCause.likelyCause}` : '',
+            rootCause ? `Suggested: ${rootCause.suggestedAction}` : '',
+            rootCause?.isLikelySystematic ? '⚠️ Likely systematic — check configuration.' : '',
             `Candidates: ${scored.map(c => `${c.strategy}(${c.score})`).join(', ')}`,
             `Selected: ${winner.strategy} (score: ${winner.score})`,
             skippedStrategies.length > 0 ? `Skipped: ${skippedStrategies.join(', ')}` : '',
@@ -263,7 +272,19 @@ export class PcecEngine {
                 costEstimate: winner.estimatedCostUsd, skippedStrategies,
             });
         }
+        // ── IDEMPOTENCY CHECK (D5) ──
+        const inProgress = this.geneMap.checkRepairInProgress(failure.code, failure.category);
+        if (inProgress.inProgress) {
+            return makeResult({
+                success: !!inProgress.txHash, mode, failure, candidates: scored, winner,
+                explanation: explanation + `\nIdempotency: repair already ${inProgress.txHash ? 'completed' : 'in progress'} (${inProgress.repairId})`,
+                verified: !!inProgress.txHash,
+                costEstimate: winner.estimatedCostUsd, skippedStrategies,
+            });
+        }
         // ── COMMIT ──
+        const repairId = this.geneMap.generateRepairId();
+        this.geneMap.logRepairStart(repairId, failure.code, failure.category, winner.strategy);
         const commitResult = await this.provider.execute(winner.strategy, failure, context);
         const totalMs = Date.now() - start;
         const revenue = REVENUE_AT_RISK[failure.category] ?? 50;
@@ -278,6 +299,8 @@ export class PcecEngine {
             this.stats.repairs++;
             this.stats.savedRevenue += revenue;
             this.cycleCount = 0;
+            const txHash = commitResult.overrides.txHash;
+            this.geneMap.logRepairComplete(repairId, txHash);
             const gene = {
                 failureCode: failure.code, category: failure.category,
                 strategy: winner.strategy, params: commitResult.overrides,
@@ -305,6 +328,7 @@ export class PcecEngine {
             });
         }
         // Verify failed
+        this.geneMap.logRepairFailed(repairId);
         if (existingGene) {
             this.geneMap.recordFailure(failure.code, failure.category);
         }

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package/dist/engine/root-causes.d.ts

@@ -0,0 +1,8 @@
+export interface RootCause {
+    hint: string;
+    likelyCause: string;
+    suggestedAction: string;
+    isLikelySystematic: boolean;
+}
+export declare function getRootCause(code: string, category: string): RootCause | null;
+//# sourceMappingURL=root-causes.d.ts.map

package/dist/engine/root-causes.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"root-causes.d.ts","sourceRoot":"","sources":["../../src/engine/root-causes.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,MAAM,CAAC;IACxB,kBAAkB,EAAE,OAAO,CAAC;CAC7B;AAkBD,wBAAgB,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,SAAS,GAAG,IAAI,CAE7E"}

package/dist/engine/root-causes.js

@@ -0,0 +1,19 @@
+const ROOT_CAUSE_MAP = {
+    'verification-failed:signature': { hint: 'concurrent_wallet_access', likelyCause: 'Multiple agents sharing one wallet cause nonce conflicts', suggestedAction: 'Use separate wallets per agent, or enable Helix nonce manager', isLikelySystematic: true },
+    'payment-insufficient:balance': { hint: 'underfunded_wallet', likelyCause: 'Wallet balance too low for transaction + gas', suggestedAction: 'Top up wallet or reduce transaction amount', isLikelySystematic: false },
+    'token-uninitialized:network': { hint: 'wrong_chain_config', likelyCause: 'Agent configured for wrong chain (testnet vs mainnet, or wrong L2)', suggestedAction: 'Check chainId and RPC URL configuration', isLikelySystematic: true },
+    'rate-limited:auth': { hint: 'api_quota_exceeded', likelyCause: 'Too many requests to API endpoint', suggestedAction: 'Implement request queuing or upgrade API tier', isLikelySystematic: false },
+    'policy-violation:policy': { hint: 'spending_limit_config', likelyCause: 'Transaction exceeds configured spending limit or allowlist', suggestedAction: 'Adjust policy limits in dashboard or split transaction', isLikelySystematic: true },
+    'server-error:service': { hint: 'upstream_outage', likelyCause: 'Upstream service is down or experiencing issues', suggestedAction: 'Retry with backoff, or switch to backup endpoint', isLikelySystematic: false },
+    'payment-required:service': { hint: 'payment_not_confirmed', likelyCause: 'Payment was sent but service did not receive confirmation', suggestedAction: 'Check on-chain receipt and retry with proof', isLikelySystematic: false },
+    'timeout:service': { hint: 'network_congestion', likelyCause: 'Network congestion or RPC node overloaded', suggestedAction: 'Increase timeout, switch RPC endpoint, or retry later', isLikelySystematic: false },
+    'tip-403:compliance': { hint: 'token_compliance_block', likelyCause: 'Token or address blocked by compliance rules', suggestedAction: 'Switch to a different stablecoin or verify address compliance', isLikelySystematic: true },
+    'malformed-credential:service': { hint: 'bad_tx_encoding', likelyCause: 'Transaction parameters malformed or missing required fields', suggestedAction: 'Check transaction encoding and populate all required fields', isLikelySystematic: true },
+    'swap-reverted:dex': { hint: 'dex_liquidity_or_slippage', likelyCause: 'Insufficient DEX liquidity or slippage exceeded tolerance', suggestedAction: 'Split swap into smaller amounts or increase slippage tolerance', isLikelySystematic: false },
+    'cascade-failure:cascade': { hint: 'multi_agent_dependency_chain', likelyCause: 'One agent in a chain failed, causing downstream agents to fail', suggestedAction: 'Check upstream agent status, refund completed steps', isLikelySystematic: false },
+    'tx-reverted:batch': { hint: 'userop_validation_failed', likelyCause: 'UserOperation validation or execution reverted on-chain', suggestedAction: 'Check calldata, gas limits, and paymaster configuration', isLikelySystematic: false },
+};
+export function getRootCause(code, category) {
+    return ROOT_CAUSE_MAP[`${code}:${category}`] ?? null;
+}
+//# sourceMappingURL=root-causes.js.map

package/dist/engine/root-causes.js.map

@@ -0,0 +1 @@
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package/dist/engine/seed-genes.d.ts

@@ -0,0 +1,3 @@
+import type { GeneCapsule } from './types.js';
+export declare const SEED_GENES: Omit<GeneCapsule, 'id'>[];
+//# sourceMappingURL=seed-genes.d.ts.map

package/dist/engine/seed-genes.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"seed-genes.d.ts","sourceRoot":"","sources":["../../src/engine/seed-genes.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AAE9C,eAAO,MAAM,UAAU,EAAE,IAAI,CAAC,WAAW,EAAE,IAAI,CAAC,EAa/C,CAAC"}

package/dist/engine/seed-genes.js

@@ -0,0 +1,15 @@
+export const SEED_GENES = [
+    { failureCode: 'verification-failed', category: 'signature', strategy: 'refresh_nonce', params: {}, successCount: 10, avgRepairMs: 180, platforms: ['tempo', 'privy', 'coinbase'], qValue: 0.85, consecutiveFailures: 0 },
+    { failureCode: 'payment-insufficient', category: 'balance', strategy: 'reduce_request', params: {}, successCount: 8, avgRepairMs: 45, platforms: ['tempo', 'privy', 'coinbase'], qValue: 0.82, consecutiveFailures: 0 },
+    { failureCode: 'rate-limited', category: 'auth', strategy: 'backoff_retry', params: { defaultDelayMs: 2000 }, successCount: 15, avgRepairMs: 2100, platforms: ['generic', 'coinbase'], qValue: 0.88, consecutiveFailures: 0 },
+    { failureCode: 'token-uninitialized', category: 'network', strategy: 'switch_network', params: {}, successCount: 6, avgRepairMs: 210, platforms: ['tempo', 'privy', 'coinbase'], qValue: 0.80, consecutiveFailures: 0 },
+    { failureCode: 'server-error', category: 'service', strategy: 'retry_with_receipt', params: {}, successCount: 12, avgRepairMs: 1500, platforms: ['generic', 'coinbase', 'tempo'], qValue: 0.78, consecutiveFailures: 0 },
+    { failureCode: 'timeout', category: 'service', strategy: 'backoff_retry', params: { defaultDelayMs: 3000 }, successCount: 10, avgRepairMs: 3200, platforms: ['generic', 'coinbase'], qValue: 0.75, consecutiveFailures: 0 },
+    { failureCode: 'policy-violation', category: 'policy', strategy: 'split_transaction', params: {}, successCount: 5, avgRepairMs: 520, platforms: ['privy', 'coinbase'], qValue: 0.76, consecutiveFailures: 0 },
+    { failureCode: 'invalid-challenge', category: 'session', strategy: 'renew_session', params: {}, successCount: 7, avgRepairMs: 150, platforms: ['tempo'], qValue: 0.82, consecutiveFailures: 0 },
+    { failureCode: 'malformed-credential', category: 'service', strategy: 'fix_params', params: {}, successCount: 6, avgRepairMs: 50, platforms: ['privy', 'coinbase'], qValue: 0.80, consecutiveFailures: 0 },
+    { failureCode: 'tip-403', category: 'compliance', strategy: 'switch_stablecoin', params: {}, successCount: 4, avgRepairMs: 800, platforms: ['tempo'], qValue: 0.72, consecutiveFailures: 0 },
+    { failureCode: 'swap-reverted', category: 'dex', strategy: 'split_swap', params: { defaultChunks: 3 }, successCount: 3, avgRepairMs: 3500, platforms: ['tempo'], qValue: 0.68, consecutiveFailures: 0 },
+    { failureCode: 'tx-reverted', category: 'batch', strategy: 'remove_and_resubmit', params: {}, successCount: 4, avgRepairMs: 450, platforms: ['tempo', 'coinbase'], qValue: 0.74, consecutiveFailures: 0 },
+];
+//# sourceMappingURL=seed-genes.js.map

package/dist/engine/seed-genes.js.map

@@ -0,0 +1 @@
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package/dist/engine/types.d.ts

@@ -10,6 +10,7 @@ export interface FailureClassification {
     platform: Platform;
     details: string;
     timestamp: number;
+    rootCauseHint?: string;
     actualBalance?: number;
     requiredAmount?: number;
     chainId?: number;

package/dist/engine/types.d.ts.map

@@ -1 +1 @@
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package/dist/engine/types.js.map

@@ -1 +1 @@
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+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/engine/types.ts"],"names":[],"mappings":"AAAA,oEAAoE;AAgMpE,mEAAmE;AAEnE,MAAM,CAAC,MAAM,eAAe,GAA2B;IACrD,OAAO,EAAE,GAAG,EAAE,OAAO,EAAE,EAAE,EAAE,QAAQ,EAAE,GAAG,EAAE,SAAS,EAAE,GAAG;IACxD,KAAK,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,UAAU,EAAE,GAAG;IACnD,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG;IACtD,IAAI,EAAE,EAAE,EAAE,OAAO,EAAE,EAAE;CACtB,CAAC;AAEF,mEAAmE;AAEnE,MAAM,CAAC,MAAM,cAAc,GAAgB;IACzC,WAAW,EAAE,aAAa;IAC1B,aAAa,EAAE,4CAA4C;IAC3D,WAAW,EAAE,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC;IACpC,aAAa,EAAE,KAAK;IACpB,UAAU,EAAE,CAAC;IACb,SAAS,EAAE,KAAK;IAChB,aAAa,EAAE,IAAI;IACnB,OAAO,EAAE,IAAI;IACb,WAAW,EAAE,kBAAkB;CAChC,CAAC"}

package/dist/index.d.ts

@@ -9,4 +9,7 @@ export { evaluate } from './engine/evaluate.js';
 export { HelixProvider } from './engine/provider.js';
 export { getDexPreset, DEX_PRESETS } from './engine/dex-presets.js';
 export { registerShutdownHandler } from './engine/lifecycle.js';
+export { getRootCause } from './engine/root-causes.js';
+export type { RootCause } from './engine/root-causes.js';
+export { SEED_GENES } from './engine/seed-genes.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,IAAI,EAAE,YAAY,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AAGhE,YAAY,EACV,qBAAqB,EACrB,eAAe,EACf,WAAW,EACX,YAAY,EACZ,eAAe,EACf,SAAS,EACT,eAAe,EACf,QAAQ,EACR,QAAQ,EACR,QAAQ,EACR,YAAY,EACZ,WAAW,EACX,WAAW,EACX,SAAS,EACT,mBAAmB,EACnB,SAAS,GACV,MAAM,mBAAmB,CAAC;AAE3B,OAAO,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAGpE,OAAO,EAAE,YAAY,EAAE,YAAY,EAAE,eAAe,EAAE,cAAc,EAAE,aAAa,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AAGnI,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAC;AAC/C,OAAO,EAAE,QAAQ,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAChD,OAAO,EAAE,QAAQ,EAAE,MAAM,sBAAsB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,sBAAsB,CAAC;AACrD,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,yBAAyB,CAAC;AACpE,OAAO,EAAE,uBAAuB,EAAE,MAAM,uBAAuB,CAAC;AAChE,OAAO,EAAE,YAAY,EAAE,MAAM,yBAAyB,CAAC;AACvD,YAAY,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACzD,OAAO,EAAE,UAAU,EAAE,MAAM,wBAAwB,CAAC"}

package/dist/index.js

@@ -11,4 +11,6 @@ export { evaluate } from './engine/evaluate.js';
 export { HelixProvider } from './engine/provider.js';
 export { getDexPreset, DEX_PRESETS } from './engine/dex-presets.js';
 export { registerShutdownHandler } from './engine/lifecycle.js';
+export { getRootCause } from './engine/root-causes.js';
+export { SEED_GENES } from './engine/seed-genes.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,mBAAmB;AACnB,OAAO,EAAE,IAAI,EAAE,YAAY,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AAsBhE,OAAO,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAEpE,+CAA+C;AAC/C,OAAO,EAAE,YAAY,EAAE,YAAY,EAAE,eAAe,EAAE,cAAc,EAAE,aAAa,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AAEnI,8CAA8C;AAC9C,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAC;AAC/C,OAAO,EAAE,QAAQ,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAChD,OAAO,EAAE,QAAQ,EAAE,MAAM,sBAAsB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,sBAAsB,CAAC;AACrD,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,yBAAyB,CAAC;AACpE,OAAO,EAAE,uBAAuB,EAAE,MAAM,uBAAuB,CAAC;AAChE,OAAO,EAAE,YAAY,EAAE,MAAM,yBAAyB,CAAC;AAEvD,OAAO,EAAE,UAAU,EAAE,MAAM,wBAAwB,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@helix-agent/core",
-  "version": "0.4.0",
+  "version": "0.5.0",
   "description": "Self-healing infrastructure for AI agent payments. Auto-repairs payment failures across Tempo, Privy, Stripe, and any HTTP service.",
   "type": "module",
   "main": "dist/index.js",