@haste-health/cli 1.12.3

package/README.md

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+# HasteHealth CLI

package/lib/client.d.ts

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+export declare function createClient(location: string): Promise<import("@haste-health/client").AsynchronousClient<import("@haste-health/client/http").HTTPContext>>;

package/lib/client.js

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+import httpClient from "@haste-health/client/http";
+import { R4, R4B } from "@haste-health/fhir-types/versions";
+import { getCurrentTenant, loadConfig } from "./config.js";
+function configureAuthHeader(tenant) {
+    return {
+        headers: {
+            Authorization: `Basic ${btoa(`${tenant.auth.client_id}:${tenant.auth.client_secret}`)}`,
+        },
+    };
+}
+function isTokenResponseValid(timeReceived, tokenResponse, 
+// Auto setting window to 10 minutes.
+window = 600) {
+    if (!tokenResponse)
+        return false;
+    const curSeconds = new Date().getTime() / 1000;
+    return curSeconds - timeReceived < tokenResponse.expires_in - window;
+}
+export async function createClient(location) {
+    const config = loadConfig(location);
+    const tenant = getCurrentTenant(location, config);
+    if (!tenant)
+        throw new Error("No tenant configured run config add-tenant.");
+    let accessTokenResponse = undefined;
+    let timeSent = new Date().getTime() / 1000;
+    let wellknown = undefined;
+    if (tenant.oidc_discovery_uri) {
+        wellknown = await fetch(tenant.oidc_discovery_uri).then((res) => res.json());
+    }
+    return httpClient({
+        url: (fhirversion) => {
+            switch (fhirversion) {
+                case R4:
+                    return tenant.r4_url;
+                case R4B:
+                    return tenant.r4b_url;
+                default:
+                    throw new Error(`Unsupported FHIR version: ${fhirversion}`);
+            }
+        },
+        getAccessToken: tenant.auth.type === "public"
+            ? undefined
+            : async function () {
+                if (accessTokenResponse &&
+                    isTokenResponseValid(timeSent, accessTokenResponse)) {
+                    return accessTokenResponse.access_token;
+                }
+                timeSent = new Date().getTime() / 1000;
+                const response = await fetch(wellknown.token_endpoint, {
+                    method: "POST",
+                    body: new URLSearchParams({
+                        grant_type: "client_credentials",
+                    }),
+                    ...configureAuthHeader(tenant),
+                });
+                accessTokenResponse = await response.json();
+                if (response.status >= 400) {
+                    throw new Error(JSON.stringify(accessTokenResponse));
+                }
+                if (!accessTokenResponse) {
+                    throw new Error("No access token received");
+                }
+                return accessTokenResponse.access_token;
+            },
+    });
+}
+//# sourceMappingURL=client.js.map

package/lib/client.js.map

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package/lib/commands/api.d.ts

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+import { Command } from "commander";
+export declare function apiCommands(command: Command): void;

package/lib/commands/api.js

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+import { confirm } from "@inquirer/prompts";
+import * as r4Sets from "@haste-health/fhir-types/r4/sets";
+import * as r4bSets from "@haste-health/fhir-types/r4b/sets";
+import { R4, R4B } from "@haste-health/fhir-types/versions";
+import { createClient } from "../client.js";
+import { CONFIG_LOCATION } from "../config.js";
+import logger from "../logger.js";
+import { conversion, dataCommand } from "../utilities.js";
+function validateResourceType(fhirVersion, resourceType) {
+    switch (fhirVersion) {
+        case R4: {
+            return r4Sets.resourceTypes.has(resourceType);
+        }
+        case R4B: {
+            return r4bSets.resourceTypes.has(resourceType);
+        }
+    }
+}
+function isBundle(value) {
+    return value?.resourceType === "Bundle";
+}
+function isParameters(value) {
+    return value?.resourceType === "Parameters";
+}
+export function apiCommands(command) {
+    command
+        .command("capabilities")
+        .argument("<fhirVersion>", "FHIR Version")
+        .action(async (userFHIRVersion) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const capabilities = await client.capabilities({}, FHIRVersion);
+        logger.info(capabilities);
+    });
+    dataCommand.command(command
+        .command("create")
+        .argument("<fhirVersion>", "FHIR Version")
+        .action(async (userFHIRVersion, options) => {
+        const resourceToSave = dataCommand.readData(options);
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!resourceToSave) {
+            throw new Error("No resource provided to save");
+        }
+        const resource = await client.create({}, FHIRVersion, resourceToSave);
+        logger.info(resource);
+    }));
+    dataCommand.command(command
+        .command("update")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .action(async (userFHIRVersion, resourceType, id, options) => {
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const resourceToSave = dataCommand.readData(options);
+        const client = await createClient(CONFIG_LOCATION);
+        if (!resourceToSave) {
+            throw new Error("No resource provided to save");
+        }
+        const resource = await client.update({}, FHIRVersion, resourceType, id, resourceToSave);
+        logger.info(resource);
+    }));
+    dataCommand.command(command
+        .command("batch")
+        .argument("<fhirVersion>", "FHIR Version")
+        .action(async (userFHIRVersion, options) => {
+        const batchBundle = dataCommand.readData(options);
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!batchBundle) {
+            throw new Error("No resource provided to save");
+        }
+        if (!isBundle(batchBundle))
+            throw new Error("invalid resource type must be a 'Bundle'.");
+        const resource = await client.batch({}, FHIRVersion, batchBundle);
+        logger.info(resource);
+    }));
+    dataCommand.command(command
+        .command("transaction")
+        .argument("<fhirVersion>", "FHIR Version")
+        .action(async (userFHIRVersion, options) => {
+        const transaction = dataCommand.readData(options);
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!transaction) {
+            throw new Error("No resource provided to save");
+        }
+        if (!isBundle(transaction))
+            throw new Error("invalid resource type must be a 'Bundle'.");
+        const resource = await client.transaction({}, FHIRVersion, transaction);
+        logger.info(resource);
+    }));
+    dataCommand.command(command
+        .command("patch")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .action(async (userFHIRVersion, resourceType, id, options) => {
+        const patches = dataCommand.readData(options);
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        if (!patches) {
+            throw new Error("No patches provided.");
+        }
+        const resource = await client.patch({}, FHIRVersion, resourceType, id, patches);
+        logger.info(resource);
+    }));
+    command
+        .command("delete")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .action(async (userFHIRVersion, resourceType, id) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const shouldDelete = await confirm({
+            message: "Are you sure you want to delete this resource?",
+        });
+        if (shouldDelete) {
+            await client.delete_instance({}, FHIRVersion, resourceType, id);
+            logger.info("Resource has been deleted.");
+        }
+    });
+    command
+        .command("search_system")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("[query]", "query")
+        .action(async (userFHIRVersion, query) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const searchResponse = await client.search_system({}, FHIRVersion, query ?? "");
+        logger.info(searchResponse);
+    });
+    command
+        .command("search_type")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("[query]", "query")
+        .action(async (userFHIRVersion, resourceType, query) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const searchResponse = await client.search_type({}, FHIRVersion, resourceType, query ?? "");
+        logger.info(searchResponse);
+    });
+    command
+        .command("read")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .action(async (userFHIRVersion, resourceType, id) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const resource = await client.read({}, FHIRVersion, resourceType, id);
+        logger.info(resource);
+    });
+    command
+        .command("vread")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .argument("<versionId>", "Resource version ID")
+        .action(async (userFHIRVersion, resourceType, id, versionId) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const resourceVersion = await client.vread({}, FHIRVersion, resourceType, id, versionId);
+        logger.info(resourceVersion);
+    });
+    command
+        .command("history_system")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("[query]", "query")
+        .action(async (userFHIRVersion, query) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const history = await client.history_system({}, FHIRVersion, query);
+        logger.info(history);
+    });
+    command
+        .command("history_type")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("[query]", "query")
+        .action(async (userFHIRVersion, resourceType, query) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const history = await client.history_type({}, FHIRVersion, resourceType, query);
+        logger.info(history);
+    });
+    command
+        .command("history_instance")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .argument("[query]", "query")
+        .action(async (userFHIRVersion, resourceType, id, query) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const history = await client.history_instance({}, FHIRVersion, resourceType, id, query);
+        logger.info(history);
+    });
+    dataCommand.command(command
+        .command("invoke_system")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<code>", "code")
+        .action(async (userFHIRVersion, code, options) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const parameters = dataCommand.readData(options);
+        if (!parameters) {
+            throw new Error("No Parameters provided");
+        }
+        if (!isParameters(parameters))
+            throw new Error("invalid Parameters.");
+        const output = await client.invoke_system(code, {}, FHIRVersion, parameters);
+        logger.info(output);
+    }));
+    dataCommand.command(command
+        .command("invoke_type")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<code>", "code")
+        .action(async (userFHIRVersion, resourceType, code, options) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const parameters = dataCommand.readData(options);
+        if (!parameters) {
+            throw new Error("No Parameters provided");
+        }
+        if (!isParameters(parameters))
+            throw new Error("invalid Parameters.");
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const output = await client.invoke_type(code, {}, FHIRVersion, resourceType, parameters);
+        logger.info(output);
+    }));
+    dataCommand.command(command
+        .command("invoke_instance")
+        .argument("<fhirVersion>", "FHIR Version")
+        .argument("<resourceType>", "Resource Type")
+        .argument("<id>", "Resource ID")
+        .argument("<code>", "code")
+        .action(async (userFHIRVersion, resourceType, id, code, options) => {
+        const client = await createClient(CONFIG_LOCATION);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const parameters = dataCommand.readData(options);
+        if (!parameters) {
+            throw new Error("No Parameters provided");
+        }
+        if (!isParameters(parameters))
+            throw new Error("invalid Parameters.");
+        if (!validateResourceType(FHIRVersion, resourceType))
+            throw new Error("Invalid resource type");
+        const output = await client.invoke_instance(code, {}, FHIRVersion, resourceType, id, parameters);
+        logger.info(output);
+    }));
+}
+//# sourceMappingURL=api.js.map

package/lib/commands/api.js.map

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package/lib/commands/generation.d.ts

@@ -0,0 +1,2 @@
+import { Command } from "commander";
+export declare function codeGenerationCommands(command: Command): void;

package/lib/commands/generation.js

@@ -0,0 +1,135 @@
+import { mkdirSync, readFileSync, writeFileSync } from "fs";
+import path from "path";
+import { fileURLToPath } from "url";
+import { generateIndexFile, loadArtifacts } from "@haste-health/artifacts";
+import { generateMetaData } from "@haste-health/codegen/generate/meta-data";
+import generateOps from "@haste-health/codegen/generate/operation-definition";
+import { generateSets } from "@haste-health/codegen/generate/sets";
+import { generateTypeToCanonicalMap } from "@haste-health/codegen/generate/type-to-canonical";
+import { generateTypes } from "@haste-health/codegen/generate/typescript-types";
+import { FHIR_VERSIONS_SUPPORTED, R4, } from "@haste-health/fhir-types/versions";
+import { StructureDefinitionSnapshot } from "@haste-health/generated-ops/lib/r4/ops";
+import { createClient } from "../client.js";
+import { CONFIG_LOCATION } from "../config.js";
+import logger from "../logger.js";
+import { conversion, getAllFiles } from "../utilities.js";
+export function codeGenerationCommands(command) {
+    command
+        .command("meta")
+        .description("Generate metadata")
+        .requiredOption("-o, --output <output>", "output file")
+        .option("-v, --version <version>", "FHIR Profiles to use", R4)
+        .action(async (options) => {
+        const structureDefinitions = loadArtifacts({
+            fhirVersion: options.version,
+            resourceType: "StructureDefinition",
+            currentDirectory: fileURLToPath(import.meta.url),
+        });
+        mkdirSync(path.join(options.output, ".."), { recursive: true });
+        const metadata = generateMetaData(structureDefinitions);
+        writeFileSync(options.output, "// Do not this code is generated \nexport default " +
+            JSON.stringify(metadata, null, 2));
+    });
+    command
+        .command("type-to-canonical")
+        .description("Generate type to canonical url for SD.")
+        .requiredOption("-o, --output <output>", "output file")
+        .option("-v, --version <version>", "FHIR Profiles to use", R4)
+        .action(async (options) => {
+        const structureDefinitions = loadArtifacts({
+            fhirVersion: options.version,
+            resourceType: "StructureDefinition",
+            currentDirectory: fileURLToPath(import.meta.url),
+        });
+        mkdirSync(path.join(options.output, ".."), { recursive: true });
+        const typeToCanonical = generateTypeToCanonicalMap(structureDefinitions);
+        writeFileSync(options.output, "// Do not this code is generated \nexport default " +
+            JSON.stringify(typeToCanonical, null, 2) +
+            " as Record<string, string>");
+    });
+    command
+        .command("types-artifacts")
+        .description("Generates typescript types off profiles")
+        .option("-o, --output <output>", "output file")
+        .option("-v, --version <version>", "FHIR Profiles to use", R4)
+        .action((options) => {
+        if (FHIR_VERSIONS_SUPPORTED.indexOf(options.version) === -1) {
+            throw new Error(`${options.version} is not supported must be oneof ${JSON.stringify(FHIR_VERSIONS_SUPPORTED)}`);
+        }
+        const structureDefinitions = loadArtifacts({
+            fhirVersion: options.version,
+            resourceType: "StructureDefinition",
+            currentDirectory: fileURLToPath(import.meta.url),
+        });
+        mkdirSync(options.output, { recursive: true });
+        const generatedTypes = generateTypes(options.version, structureDefinitions);
+        const generatedSets = generateSets(options.version, structureDefinitions);
+        writeFileSync(path.join(options.output, "types.ts"), generatedTypes);
+        writeFileSync(path.join(options.output, "sets.ts"), generatedSets);
+    });
+    command
+        .command("operations")
+        .description("Generate Operation types and classes")
+        .option("-o, --output <output>", "output file")
+        .option("-v, --version <version>", "FHIR Profiles to use", R4)
+        .action(async (options) => {
+        if (options.version !== R4) {
+            throw new Error("Currently only support r4");
+        }
+        const operationDefinitions = loadArtifacts({
+            fhirVersion: options.version,
+            resourceType: "OperationDefinition",
+            currentDirectory: fileURLToPath(import.meta.url),
+        });
+        mkdirSync(options.output, { recursive: true });
+        const generatedOpCode = await generateOps(options.version, operationDefinitions);
+        writeFileSync(path.join(options.output, "ops.ts"), generatedOpCode);
+    });
+    command
+        .command("index-file")
+        .description("Generate a FHIR npm package index file ")
+        .option("-p, --packagedir <packagedir>", "")
+        .option("-r, --resources <resources>", "")
+        .option("-i, --ignore   [ignore...]", "")
+        .option("-e, --extension   <extension>", "")
+        .action((options) => {
+        const indexFile = generateIndexFile({
+            root: options.packagedir,
+            artifactLocations: [options.resources],
+            ignore: options.ignore,
+            extension: options.extension,
+        });
+        logger.info("generating index file");
+        const indexLoc = path.join(options.packagedir, ".index.json");
+        writeFileSync(indexLoc, JSON.stringify(indexFile, null, 2));
+        logger.info(`index generated and saved at '${indexLoc}'`);
+    });
+    command
+        .command("snapshot")
+        .argument("<fhirVersion>", "FHIR Version")
+        .description("Generate a snapshot of a StructureDefinition")
+        .option("-d, --directory <directory>", "Directory with artifacts to minimize.")
+        .action(async (userFHIRVersion, options) => {
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const profileLocs = getAllFiles(options.directory).filter((f) => !f.endsWith("min.json") && f.endsWith(".json"));
+        for (const profileLoc of profileLocs) {
+            const fileContents = readFileSync(profileLoc);
+            const profile = JSON.parse(fileContents.toString("utf8"));
+            if (typeof profile === "object" &&
+                profile.resourceType === "StructureDefinition") {
+                const client = await createClient(CONFIG_LOCATION);
+                if (!profile ||
+                    typeof profile !== "object" ||
+                    profile?.resourceType !==
+                        "StructureDefinition") {
+                    throw new Error("No StructureDefinition to generate snapshot.");
+                }
+                const sd = await client.invoke_type(StructureDefinitionSnapshot.Op, {}, FHIRVersion, "StructureDefinition", {
+                    definition: profile,
+                });
+                writeFileSync(profileLoc, JSON.stringify(sd, null, 2));
+            }
+        }
+    });
+}
+//# sourceMappingURL=generation.js.map

package/lib/commands/generation.js.map

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package/lib/commands/minimize.d.ts

@@ -0,0 +1,5 @@
+import { Command } from "commander";
+/**
+ * Minimize artifacts Namely StructureDefinition, OperationDefinition, ValueSet, CodeSystem
+ */
+export declare function minimizeCommands(command: Command): void;

package/lib/commands/minimize.js

@@ -0,0 +1,69 @@
+import fs from "node:fs";
+import { getAllFiles } from "../utilities.js";
+function minimizeResource(resource) {
+    switch (resource.resourceType) {
+        case "StructureDefinition": {
+            const minimizedSd = {
+                id: resource.id,
+                resourceType: resource.resourceType,
+                name: resource.name,
+                title: resource.title,
+                abstract: resource.abstract,
+                url: resource.url,
+                version: resource.version,
+                context: resource.context,
+                type: resource.type,
+                baseDefinition: resource.baseDefinition,
+                kind: resource.kind,
+                derivation: resource.derivation,
+                status: resource.status,
+                snapshot: {
+                    element: resource.snapshot?.element?.map((element) => {
+                        delete element["mapping"];
+                        return element;
+                    }) ?? [],
+                },
+            };
+            return minimizedSd;
+        }
+        case "ValueSet":
+        case "CodeSystem":
+        case "OperationDefinition":
+        default: {
+            return resource;
+        }
+    }
+}
+/**
+ * Minimize artifacts Namely StructureDefinition, OperationDefinition, ValueSet, CodeSystem
+ */
+export function minimizeCommands(command) {
+    command
+        .command("artifacts")
+        .description("Minimize Artifacts (Will output as [filename].min.json)")
+        .option("-d, --directory <output>", "Directory with artifacts to minimize.")
+        .action((options) => {
+        const directory = options.directory;
+        const files = getAllFiles(directory).filter((f) => !f.endsWith("min.json") && f.endsWith(".json"));
+        for (const file of files) {
+            const fileContents = fs.readFileSync(file);
+            const json = JSON.parse(fileContents.toString("utf8"));
+            if (json.resourceType === "Bundle") {
+                const bundle = json;
+                fs.writeFileSync(file.replace(".json", ".min.json"), JSON.stringify({
+                    ...bundle,
+                    entry: bundle.entry?.map((e) => {
+                        if (e.resource) {
+                            e.resource = minimizeResource(e.resource);
+                        }
+                        return e;
+                    }),
+                }));
+            }
+            else if (json.resourceType) {
+                fs.writeFileSync(file.replace(".json", ".min.json"), JSON.stringify(minimizeResource(json)));
+            }
+        }
+    });
+}
+//# sourceMappingURL=minimize.js.map

package/lib/commands/minimize.js.map

@@ -0,0 +1 @@
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package/lib/commands/testscript.d.ts

@@ -0,0 +1,2 @@
+import { Command } from "commander";
+export declare function testscriptCommands(command: Command): void;

package/lib/commands/testscript.js

@@ -0,0 +1,82 @@
+import fs from "node:fs";
+import path from "node:path";
+import * as ts from "@haste-health/testscript-runner";
+import { createClient } from "../client.js";
+import { CONFIG_LOCATION } from "../config.js";
+import logger from "../logger.js";
+function getAllFiles(location) {
+    if (fs.lstatSync(location).isFile()) {
+        return [location];
+    }
+    const files = [];
+    const filesInDirectory = fs.readdirSync(location);
+    for (const file of filesInDirectory) {
+        const absolute = path.join(location, file);
+        if (fs.statSync(absolute).isDirectory()) {
+            files.push(...getAllFiles(absolute));
+        }
+        else {
+            files.push(absolute);
+        }
+    }
+    return files;
+}
+async function executeTestScript(fhirVersion, testScript, timeout = 0) {
+    const client = await createClient(CONFIG_LOCATION);
+    const report = await ts.run(logger, client, fhirVersion, testScript, timeout);
+    return report;
+}
+export function testscriptCommands(command) {
+    command
+        .command("run")
+        .description("Run testscript files against server.")
+        .requiredOption("-i, --input <input>")
+        .option("-o --output <output>", "Where to output files")
+        .option("-e, --extension   <extension>", "Extensions to search for tests", ".testscript.json")
+        .option("-t, --timeout   <timeout>", "wait time between operations", ".testscript.json")
+        .option("--fhir-version <fhirVersion>", "FHIR Version to use", "4.0")
+        .action(async (options) => {
+        let exitCode = 0;
+        const files = getAllFiles(options.input)
+            .flat()
+            .filter((f) => f.endsWith(options.extension))
+            .sort((a, b) => a.localeCompare(b));
+        const output = {
+            resourceType: "Bundle",
+            type: "collection",
+            entry: [],
+        };
+        for (const file of files) {
+            const fileContents = fs.readFileSync(file);
+            const json = JSON.parse(fileContents.toString("utf8"));
+            if (json.resourceType === "Bundle") {
+                const bundle = json;
+                const testscripts = bundle.entry
+                    ?.map((e) => e.resource)
+                    .filter((r) => r?.resourceType === "TestScript") ?? [];
+                for (const testScript of testscripts) {
+                    output.entry?.push({ resource: testScript });
+                    const report = await executeTestScript(options.fhirVersion, testScript, parseInt(options.timeout ?? "0"));
+                    output.entry?.push({ resource: report });
+                    if (report.result === "fail") {
+                        exitCode = 1;
+                    }
+                }
+            }
+            else if (json.resourceType === "TestScript") {
+                const testScript = json;
+                output.entry?.push({ resource: testScript });
+                const report = await executeTestScript(options.fhirVersion, testScript, parseInt(options.timeout ?? "0"));
+                output.entry?.push({ resource: report });
+                if (report.result === "fail") {
+                    exitCode = 1;
+                }
+            }
+        }
+        if (options.output) {
+            fs.writeFileSync(options.output, JSON.stringify(output, null, 2));
+        }
+        process.exit(exitCode);
+    });
+}
+//# sourceMappingURL=testscript.js.map

package/lib/commands/testscript.js.map

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package/lib/commands/validate.d.ts

@@ -0,0 +1,2 @@
+import { Command } from "commander";
+export declare function validate(command: Command): void;

package/lib/commands/validate.js

@@ -0,0 +1,30 @@
+import { R4, R4B, } from "@haste-health/fhir-types/versions";
+import { createClient } from "../client.js";
+import { CONFIG_LOCATION } from "../config.js";
+import logger from "../logger.js";
+import { conversion, dataCommand } from "../utilities.js";
+export function validate(command) {
+    dataCommand.command(command
+        .command("validate")
+        .argument("<fhirVersion>", "FHIR Version")
+        .action(async (userFHIRVersion, options) => {
+        const resource = dataCommand.readData(options);
+        const FHIRVersion = conversion.asFHIRType(userFHIRVersion);
+        const client = await createClient(CONFIG_LOCATION);
+        switch (FHIRVersion) {
+            case R4: {
+                const result = await client.invoke_type("validate", {}, FHIRVersion, resource.resourceType, {
+                    resourceType: "Parameters",
+                    parameter: [{ name: "resource", resource }],
+                });
+                logger.warn(result);
+                return;
+            }
+            case R4B:
+            default: {
+                throw new Error("Unsupported FHIR Version");
+            }
+        }
+    }));
+}
+//# sourceMappingURL=validate.js.map

package/lib/commands/validate.js.map

@@ -0,0 +1 @@
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package/lib/config.d.ts

@@ -0,0 +1,23 @@
+import { JsonMap } from "@iarna/toml";
+import { Command } from "commander";
+export declare const CONFIG_LOCATION: string;
+export interface Tenant extends JsonMap {
+    name: string;
+    r4_url: string;
+    r4b_url: string;
+    oidc_discovery_uri: string;
+    auth: {
+        type: "public" | "client_credentials";
+        client_id?: string;
+        client_secret?: string;
+    };
+}
+export interface Config extends JsonMap {
+    lastUpdated: string;
+    defaultTenant: Tenant["name"];
+    tenants: Tenant[];
+}
+export declare function loadConfig(location: string): Config;
+export declare function saveConfig(location: string, config: Config): void;
+export declare function getCurrentTenant(location: string, config: Config): Tenant | undefined;
+export declare function configurationCommands(command: Command): void;

package/lib/config.js

@@ -0,0 +1,171 @@
+import toml from "@iarna/toml";
+import * as inquirer from "@inquirer/prompts";
+import fs from "node:fs";
+import { homedir } from "node:os";
+import path from "node:path";
+import logger from "./logger.js";
+export const CONFIG_LOCATION = path.join(homedir(), ".haste-health/config.toml");
+function initializeConfig(location) {
+    logger.info("Initializing configuration file");
+    const initialConfig = {
+        defaultTenant: "",
+        lastUpdated: new Date().toISOString(),
+        tenants: [],
+    };
+    saveConfig(location, initialConfig);
+    return initialConfig;
+}
+export function loadConfig(location) {
+    let config;
+    try {
+        const configuration = fs.readFileSync(location, "utf8");
+        config = toml.parse(configuration);
+    }
+    catch (e) {
+        config = initializeConfig(location);
+    }
+    return config;
+}
+export function saveConfig(location, config) {
+    if (!fs.existsSync(path.join(location, "../"))) {
+        fs.mkdirSync(path.join(location, "../"), { recursive: true });
+    }
+    fs.writeFileSync(location, toml.stringify(config), "utf8");
+}
+export function getCurrentTenant(location, config) {
+    if (!config.defaultTenant) {
+        config = {
+            ...config,
+            defaultTenant: config.tenants[0]?.name,
+        };
+        saveConfig(location, config);
+    }
+    return config.tenants.find((tenant) => tenant.name === config.defaultTenant);
+}
+export function configurationCommands(command) {
+    command
+        .command("switch-tenant")
+        .description("Switch tenant to use to add a tenant use add-tenant")
+        .option("-t, --tenant <tenant>", "Tenant name")
+        .action(async (options) => {
+        const config = loadConfig(CONFIG_LOCATION);
+        if (options.tenant) {
+            const tenant = config.tenants.find((t) => t.name === options.tenant);
+            if (!tenant)
+                throw new Error("No tenant found with that name");
+            saveConfig(CONFIG_LOCATION, { ...config, defaultTenant: tenant.name });
+        }
+        else {
+            const defaultTenant = await inquirer.select({
+                message: "Switch tenant to use",
+                choices: config.tenants.map((t) => ({
+                    name: t.name,
+                    value: t.name,
+                })),
+            });
+            saveConfig(CONFIG_LOCATION, { ...config, defaultTenant });
+        }
+    });
+    command
+        .command("delete-tenant")
+        .description("Delete a tenant")
+        .requiredOption("-t, --tenant <tenant>", "Tenant name")
+        .action(async (options) => {
+        const config = loadConfig(CONFIG_LOCATION);
+        const tenants = config.tenants.filter((t) => t.name !== options.tenant);
+        saveConfig(CONFIG_LOCATION, {
+            ...config,
+            defaultTenant: options.tenant === config.defaultTenant ? "" : config.defaultTenant,
+            tenants,
+        });
+    });
+    command
+        .command("show-tenant")
+        .description("Display the current tenant.")
+        .action(async () => {
+        const config = loadConfig(CONFIG_LOCATION);
+        const currentTenant = getCurrentTenant(CONFIG_LOCATION, config);
+        if (currentTenant) {
+            logger.info(currentTenant);
+        }
+        else {
+            logger.warn("No tenant configured");
+        }
+    });
+    command
+        .command("add-tenant")
+        .description("Add a tenant to the configuration file")
+        .option("-r4, --r4-url <r4Url>", "r4 URL")
+        .option("-r4b, --r4b-url <r4bUrl>", "r4b URL")
+        .option("-i, --oidc <oidcDiscovery>", "Enter the OIDC discovery URL")
+        .option("-a, --auth <authMethod>", "Enter auth method")
+        .option("-n, --name <name>", "Tenant name")
+        .option("--client-id <clientId>", "Client id")
+        .option("--client-secret <clientSecret>", "Client secret")
+        .action(async (options) => {
+        const config = loadConfig(CONFIG_LOCATION);
+        const name = options.name
+            ? options.name
+            : await inquirer.input({
+                message: "Enter tenant name:",
+                validate: async (value) => {
+                    const existingTenant = config.tenants.find((t) => t.name === value);
+                    return existingTenant !== undefined
+                        ? `Tenant with name '${value}' already exists. Must be unique.`
+                        : true;
+                },
+            });
+        const r4Url = options.r4Url
+            ? options.r4Url
+            : await inquirer.input({
+                message: "Enter the R4 URL",
+            });
+        const r4bUrl = options.r4bUrl
+            ? options.r4bUrl
+            : await inquirer.input({
+                message: "Enter an R4B URL. ",
+            });
+        const authMethod = options.auth
+            ? options.auth
+            : await inquirer.select({
+                message: "Select an auth method",
+                choices: [
+                    { name: "public", value: "public" },
+                    { name: "client_credentials", value: "client_credentials" },
+                ],
+            });
+        let oidcDiscovery = "";
+        let client_id = "";
+        let client_secret = "";
+        if (authMethod === "client_credentials") {
+            oidcDiscovery = options.oidc
+                ? options.oidc
+                : await inquirer.input({
+                    message: "Enter the url for discovery. ",
+                });
+            client_id = options.clientId
+                ? options.clientId
+                : await inquirer.input({
+                    message: "Enter client id:",
+                });
+            client_secret = options.clientSecret
+                ? options.clientSecret
+                : await inquirer.password({
+                    message: "Enter client secret:",
+                });
+        }
+        config.tenants.push({
+            r4_url: r4Url,
+            r4b_url: r4bUrl,
+            oidc_discovery_uri: oidcDiscovery,
+            name,
+            auth: {
+                type: authMethod,
+                client_id,
+                client_secret,
+            },
+        });
+        saveConfig(CONFIG_LOCATION, config);
+    });
+}
+//# sourceMappingURL=config.js.map

package/lib/config.js.map

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package/lib/hastehealth.d.ts

@@ -0,0 +1 @@
+export {};

package/lib/hastehealth.js

@@ -0,0 +1,19 @@
+#!/usr/bin/env node
+
+import { Command } from "commander";
+import { apiCommands } from "./commands/api.js";
+import { codeGenerationCommands } from "./commands/generation.js";
+import { minimizeCommands } from "./commands/minimize.js";
+import { testscriptCommands } from "./commands/testscript.js";
+import { validate } from "./commands/validate.js";
+import { configurationCommands } from "./config.js";
+const program = new Command();
+program.name("HasteHealth CLI Tool").description("HasteHealth CLI interface.");
+configurationCommands(program.command("config"));
+codeGenerationCommands(program.command("generate"));
+apiCommands(program.command("api"));
+validate(program);
+minimizeCommands(program.command("minimize"));
+testscriptCommands(program.command("test"));
+program.parse();
+//# sourceMappingURL=hastehealth.js.map

package/lib/hastehealth.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"hastehealth.js","sourceRoot":"","sources":["../src/hastehealth.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAEpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,sBAAsB,EAAE,MAAM,0BAA0B,CAAC;AAClE,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,QAAQ,EAAE,MAAM,wBAAwB,CAAC;AAClD,OAAO,EAAE,qBAAqB,EAAE,MAAM,aAAa,CAAC;AAEpD,MAAM,OAAO,GAAG,IAAI,OAAO,EAAE,CAAC;AAE9B,OAAO,CAAC,IAAI,CAAC,sBAAsB,CAAC,CAAC,WAAW,CAAC,4BAA4B,CAAC,CAAC;AAE/E,qBAAqB,CAAC,OAAO,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAC,CAAC;AACjD,sBAAsB,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC;AACpD,WAAW,CAAC,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC;AACpC,QAAQ,CAAC,OAAO,CAAC,CAAC;AAClB,gBAAgB,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC;AAC9C,kBAAkB,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC;AAE5C,OAAO,CAAC,KAAK,EAAE,CAAC"}

package/lib/logger.d.ts

@@ -0,0 +1,2 @@
+declare const logger: import("pino").Logger<string, boolean>;
+export default logger;

package/lib/logger.js

@@ -0,0 +1,9 @@
+import { pino } from "pino";
+import pretty from "pino-pretty";
+const prettyStream = pretty({
+    levelFirst: true,
+    colorize: true,
+});
+const logger = pino({}, process.env.NODE_ENV !== "production" ? prettyStream : undefined);
+export default logger;
+//# sourceMappingURL=logger.js.map

package/lib/logger.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"logger.js","sourceRoot":"","sources":["../src/logger.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,MAAM,CAAC;AAC5B,OAAO,MAAM,MAAM,aAAa,CAAC;AAEjC,MAAM,YAAY,GAAG,MAAM,CAAC;IAC1B,UAAU,EAAE,IAAI;IAChB,QAAQ,EAAE,IAAI;CACf,CAAC,CAAC;AAEH,MAAM,MAAM,GAAG,IAAI,CACjB,EAAE,EACF,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,SAAS,CACjE,CAAC;AAEF,eAAe,MAAM,CAAC"}

package/lib/oxidizedhealth.d.ts

@@ -0,0 +1 @@
+export {};

package/lib/oxidizedhealth.js

@@ -0,0 +1,21 @@
+#!/usr/bin/env node
+
+import { Command } from "commander";
+import { apiCommands } from "./commands/api.js";
+import { codeGenerationCommands } from "./commands/generation.js";
+import { minimizeCommands } from "./commands/minimize.js";
+import { testscriptCommands } from "./commands/testscript.js";
+import { validate } from "./commands/validate.js";
+import { configurationCommands } from "./config.js";
+const program = new Command();
+program
+    .name("OxidizedHealth CLI Tool")
+    .description("OxidizedHealth CLI interface.");
+configurationCommands(program.command("config"));
+codeGenerationCommands(program.command("generate"));
+apiCommands(program.command("api"));
+validate(program);
+minimizeCommands(program.command("minimize"));
+testscriptCommands(program.command("test"));
+program.parse();
+//# sourceMappingURL=oxidizedhealth.js.map

package/lib/oxidizedhealth.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"oxidizedhealth.js","sourceRoot":"","sources":["../src/oxidizedhealth.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAEpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,sBAAsB,EAAE,MAAM,0BAA0B,CAAC;AAClE,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,QAAQ,EAAE,MAAM,wBAAwB,CAAC;AAClD,OAAO,EAAE,qBAAqB,EAAE,MAAM,aAAa,CAAC;AAEpD,MAAM,OAAO,GAAG,IAAI,OAAO,EAAE,CAAC;AAE9B,OAAO;KACJ,IAAI,CAAC,yBAAyB,CAAC;KAC/B,WAAW,CAAC,+BAA+B,CAAC,CAAC;AAEhD,qBAAqB,CAAC,OAAO,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAC,CAAC;AACjD,sBAAsB,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC;AACpD,WAAW,CAAC,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC;AACpC,QAAQ,CAAC,OAAO,CAAC,CAAC;AAClB,gBAAgB,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC;AAC9C,kBAAkB,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC;AAE5C,OAAO,CAAC,KAAK,EAAE,CAAC"}

package/lib/utilities.d.ts

@@ -0,0 +1,15 @@
+import { Command } from "commander";
+import { FHIR_VERSION } from "@haste-health/fhir-types/versions";
+type MutationOptions = {
+    file?: string;
+    data?: string;
+};
+export declare namespace conversion {
+    function asFHIRType(fhirType: string): FHIR_VERSION;
+}
+export declare function getAllFiles(directory: string): string[];
+export declare namespace dataCommand {
+    function readData(option: MutationOptions): unknown;
+    function command(command: Command): Command;
+}
+export {};

package/lib/utilities.js

@@ -0,0 +1,57 @@
+import fs from "node:fs";
+import path from "node:path";
+import { R4, R4B } from "@haste-health/fhir-types/versions";
+export var conversion;
+(function (conversion) {
+    function asFHIRType(fhirType) {
+        switch (fhirType) {
+            case "r4":
+            case R4: {
+                return R4;
+            }
+            case "r4b":
+            case R4B: {
+                return R4B;
+            }
+            default: {
+                throw new Error("invalid FHIR version must be 'r4' or 'r4b' or '4.3' or '4.0'");
+            }
+        }
+    }
+    conversion.asFHIRType = asFHIRType;
+})(conversion || (conversion = {}));
+export function getAllFiles(directory) {
+    const files = [];
+    const filesInDirectory = fs.readdirSync(directory);
+    for (const file of filesInDirectory) {
+        const absolute = path.join(directory, file);
+        if (fs.statSync(absolute).isDirectory()) {
+            files.push(...getAllFiles(absolute));
+        }
+        else {
+            files.push(absolute);
+        }
+    }
+    return files;
+}
+export var dataCommand;
+(function (dataCommand) {
+    function readData(option) {
+        if (option.file) {
+            return JSON.parse(fs.readFileSync(option.file, "utf-8"));
+        }
+        if (option.data) {
+            return JSON.parse(option.data);
+        }
+        throw new Error("No resource provided");
+    }
+    dataCommand.readData = readData;
+    function command(command) {
+        command
+            .option("-f, --file <file>", "File for resource")
+            .option("-d, --data <data>", "Data for resource");
+        return command;
+    }
+    dataCommand.command = command;
+})(dataCommand || (dataCommand = {}));
+//# sourceMappingURL=utilities.js.map

package/lib/utilities.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -0,0 +1,42 @@
+{
+  "name": "@haste-health/cli",
+  "version": "1.12.3",
+  "homepage": "https://haste.health",
+  "repository": {
+    "type": "git",
+    "url": "https://github.com/HasteHealth/HasteHealth.git"
+  },
+  "bin": {
+    "haste-health": "lib/hastehealth.js"
+  },
+  "types": "lib/haste-health.d.ts",
+  "target": "node",
+  "type": "module",
+  "dependencies": {
+    "@haste-health/artifacts": "workspace:^",
+    "@haste-health/client": "workspace:^",
+    "@haste-health/codegen": "workspace:^",
+    "@haste-health/generated-ops": "workspace:^",
+    "@haste-health/haste-health.fhir.r4.core": "workspace:^",
+    "@haste-health/hl7.fhir.r4.core": "workspace:^",
+    "@haste-health/hl7.fhir.r4b.core": "workspace:^",
+    "@haste-health/testscript-runner": "workspace:^",
+    "@iarna/toml": "^2.2.5",
+    "@inquirer/prompts": "^5.5.0",
+    "@types/node": "^22.15.17",
+    "commander": "^12.1.0",
+    "pino": "^9.6.0",
+    "pino-pretty": "^11.3.0"
+  },
+  "devDependencies": {
+    "@haste-health/fhir-types": "workspace:^",
+    "typescript": "5.9.2"
+  },
+  "scripts": {
+    "build": "tsc && node executable.js ./lib/hastehealth.js && chmod +x ./lib/hastehealth.js",
+    "publish": "pnpm build && pnpm npm publish --access public --tolerate-republish"
+  },
+  "files": [
+    "lib/**"
+  ]
+}