@haniffalab/cherita-react 1.4.6 → 1.5.0-dev.2026-02-19.5a87edc2

package/dist/cjs/components/dotplot/Dotplot.js

@@ -15,7 +15,8 @@ var _SettingsContext = require("../../context/SettingsContext");
 var _LoadingIndicators = require("../../utils/LoadingIndicators");
 var _requests = require("../../utils/requests");
 var _Resolver = require("../../utils/Resolver");
-var _PlotAlert = require("../full-page/PlotAlert");
+var _usePlotVisibility = _interopRequireDefault(require("../../utils/usePlotVisibility"));
+var _PlotAlert = require("../plot/PlotAlert");
 var _Toolbar = require("../toolbar/Toolbar");
 var _jsxRuntime = require("react/jsx-runtime");
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
@@ -26,14 +27,12 @@ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol"
 function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
 function Dotplot(_ref) {
   let {
-    showObsBtn = false,
-    showVarsBtn = false,
-    showCtrlsBtn = false,
-    setShowObs,
-    setShowVars,
+    setShowCategories,
+    setShowSearch,
     setShowControls,
     plotType,
-    setPlotType
+    setPlotType,
+    isFullscreen = false
   } = _ref;
   const ENDPOINT = 'dotplot';
   const dataset = (0, _DatasetContext.useDataset)();
@@ -49,20 +48,27 @@ function Dotplot(_ref) {
   const [hasSelections, setHasSelections] = (0, _react.useState)(false);
   const selectedObs = (0, _Resolver.useSelectedObs)();
   const selectedMultiVar = (0, _Resolver.useSelectedMultiVar)();
-  const params = (0, _react.useMemo)(() => ({
-    url: dataset.url,
-    obsCol: selectedObs,
-    obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
-    varKeys: selectedMultiVar.map(i => i.isSet ? {
-      name: i.name,
-      indices: i.vars.map(v => v.index)
-    } : i.index),
-    obsIndices: isSliced ? [...(obsIndices || [])] : null,
-    standardScale: settings.controls.scale.dotplot,
-    meanOnlyExpressed: settings.controls.meanOnlyExpressed,
-    expressionCutoff: settings.controls.expressionCutoff,
-    varNamesCol: dataset.varNamesCol
-  }), [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs, settings.controls.expressionCutoff, settings.controls.meanOnlyExpressed, settings.controls.scale.dotplot]);
+  const {
+    showCategoriesBtn,
+    showSearchBtn
+  } = (0, _usePlotVisibility.default)(isFullscreen);
+  const params = (0, _react.useMemo)(() => {
+    var _selectedObs$omit;
+    return {
+      url: dataset.url,
+      obsCol: selectedObs,
+      obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit = selectedObs.omit) !== null && _selectedObs$omit !== void 0 && _selectedObs$omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
+      varKeys: selectedMultiVar.map(i => i.isSet ? {
+        name: i.name,
+        indices: i.vars.map(v => v.index)
+      } : i.index),
+      obsIndices: isSliced ? [...(obsIndices || [])] : null,
+      standardScale: settings.controls.scale.dotplot,
+      meanOnlyExpressed: settings.controls.meanOnlyExpressed,
+      expressionCutoff: settings.controls.expressionCutoff,
+      varNamesCol: dataset.varNamesCol
+    };
+  }, [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs, settings.controls.expressionCutoff, settings.controls.meanOnlyExpressed, settings.controls.scale.dotplot]);
   // @TODO: set default scale
 
   (0, _react.useEffect)(() => {
@@ -122,19 +128,21 @@ function Dotplot(_ref) {
       });
     });
   }, [settings.controls.colorAxis.cmin, settings.controls.colorAxis.cmax]);
-  const customModeBarButtons = _lodash.default.compact([showObsBtn && (0, _Toolbar.ObsPlotlyToolbar)({
-    onClick: setShowObs
-  }), showVarsBtn && (0, _Toolbar.VarPlotlyToolbar)({
-    onClick: setShowVars
-  }), showCtrlsBtn && (0, _Toolbar.ControlsPlotlyToolbar)({
+  const modeBarButtons = [_lodash.default.compact([(0, _Toolbar.PlotlyModebarControls)({
     onClick: setShowControls
-  })]);
-  const modeBarButtons = customModeBarButtons.length ? [customModeBarButtons, _constants.PLOTLY_MODEBAR_BUTTONS] : [_constants.PLOTLY_MODEBAR_BUTTONS];
+  }), ..._constants.PLOTLY_MODEBAR_BUTTONS])];
   if (!serverError) {
     if (hasSelections) {
       return /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
         className: "cherita-plot cherita-dotplot position-relative",
-        children: [isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
+        children: [/*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+          className: "plotly-toolbar",
+          children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_Toolbar.PlotlyToolbar, {
+            setShowCategories: setShowCategories,
+            setShowSearch: setShowSearch,
+            isFullscreen: isFullscreen
+          })
+        }), isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
           data: data,
           layout: layout,
           useResizeHandler: true,
@@ -156,15 +164,15 @@ function Dotplot(_ref) {
       setPlotType: setPlotType,
       children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("p", {
         className: "p-0 m-0",
-        children: ["Select one or more", ' ', showVarsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        children: ["Select one or more", ' ', showSearchBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowVars,
+          onClick: setShowSearch,
           children: "features"
-        }) : 'features', ' ', "to display their expression across groups, then choose a", ' ', showObsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        }) : 'features', ' ', "to display their expression across groups, then choose a", ' ', showCategoriesBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowObs,
+          onClick: setShowCategories,
           children: "category"
         }) : 'category', ' ', "to group observations in the dotplot."]
       })

package/dist/cjs/components/heatmap/Heatmap.js

@@ -15,7 +15,8 @@ var _SettingsContext = require("../../context/SettingsContext");
 var _LoadingIndicators = require("../../utils/LoadingIndicators");
 var _requests = require("../../utils/requests");
 var _Resolver = require("../../utils/Resolver");
-var _PlotAlert = require("../full-page/PlotAlert");
+var _usePlotVisibility = _interopRequireDefault(require("../../utils/usePlotVisibility"));
+var _PlotAlert = require("../plot/PlotAlert");
 var _Toolbar = require("../toolbar/Toolbar");
 var _jsxRuntime = require("react/jsx-runtime");
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
@@ -26,14 +27,12 @@ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol"
 function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
 function Heatmap(_ref) {
   let {
-    showObsBtn = false,
-    showVarsBtn = false,
-    showCtrlsBtn = false,
-    setShowObs,
-    setShowVars,
+    setShowCategories,
+    setShowSearch,
     setShowControls,
     plotType,
-    setPlotType
+    setPlotType,
+    isFullscreen = false
   } = _ref;
   const ENDPOINT = 'heatmap';
   const dataset = (0, _DatasetContext.useDataset)();
@@ -48,17 +47,24 @@ function Heatmap(_ref) {
   const [hasSelections, setHasSelections] = (0, _react.useState)(false);
   const selectedObs = (0, _Resolver.useSelectedObs)();
   const selectedMultiVar = (0, _Resolver.useSelectedMultiVar)();
-  const params = (0, _react.useMemo)(() => ({
-    url: dataset.url,
-    obsCol: selectedObs,
-    obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
-    varKeys: selectedMultiVar.map(i => i.isSet ? {
-      name: i.name,
-      indices: i.vars.map(v => v.index)
-    } : i.index),
-    obsIndices: isSliced ? [...(obsIndices || [])] : null,
-    varNamesCol: dataset.varNamesCol
-  }), [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs]);
+  const {
+    showCategoriesBtn,
+    showSearchBtn
+  } = (0, _usePlotVisibility.default)(isFullscreen);
+  const params = (0, _react.useMemo)(() => {
+    var _selectedObs$omit;
+    return {
+      url: dataset.url,
+      obsCol: selectedObs,
+      obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit = selectedObs.omit) !== null && _selectedObs$omit !== void 0 && _selectedObs$omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
+      varKeys: selectedMultiVar.map(i => i.isSet ? {
+        name: i.name,
+        indices: i.vars.map(v => v.index)
+      } : i.index),
+      obsIndices: isSliced ? [...(obsIndices || [])] : null,
+      varNamesCol: dataset.varNamesCol
+    };
+  }, [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs]);
   (0, _react.useEffect)(() => {
     if (selectedObs && selectedMultiVar.length) {
       setHasSelections(true);
@@ -96,19 +102,21 @@ function Heatmap(_ref) {
     colorscale.current = settings.controls.colorScale;
     updateColorscale(colorscale.current);
   }, [settings.controls.colorScale, updateColorscale]);
-  const customModeBarButtons = _lodash.default.compact([showObsBtn && (0, _Toolbar.ObsPlotlyToolbar)({
-    onClick: setShowObs
-  }), showVarsBtn && (0, _Toolbar.VarPlotlyToolbar)({
-    onClick: setShowVars
-  }), showCtrlsBtn && (0, _Toolbar.ControlsPlotlyToolbar)({
+  const modeBarButtons = [_lodash.default.compact([(0, _Toolbar.PlotlyModebarControls)({
     onClick: setShowControls
-  })]);
-  const modeBarButtons = customModeBarButtons.length ? [customModeBarButtons, _constants.PLOTLY_MODEBAR_BUTTONS] : [_constants.PLOTLY_MODEBAR_BUTTONS];
+  }), ..._constants.PLOTLY_MODEBAR_BUTTONS])];
   if (!serverError) {
     if (hasSelections) {
       return /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
         className: "cherita-plot cherita-heatmap position-relative",
-        children: [isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
+        children: [/*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+          className: "plotly-toolbar",
+          children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_Toolbar.PlotlyToolbar, {
+            setShowCategories: setShowCategories,
+            setShowSearch: setShowSearch,
+            isFullscreen: isFullscreen
+          })
+        }), isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
           data: data,
           layout: layout,
           useResizeHandler: true,
@@ -130,15 +138,15 @@ function Heatmap(_ref) {
       setPlotType: setPlotType,
       children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("p", {
         className: "p-0 m-0",
-        children: ["Select one or more", ' ', showVarsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        children: ["Select one or more", ' ', showSearchBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowVars,
+          onClick: setShowSearch,
           children: "features"
-        }) : 'features', ' ', "to display their expression, then choose a", ' ', showObsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        }) : 'features', ' ', "to display their expression, then choose a", ' ', showCategoriesBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowObs,
+          onClick: setShowCategories,
           children: "category"
         }) : 'category', ' ', "to group observations in the heatmap."]
       })

package/dist/cjs/components/matrixplot/Matrixplot.js

@@ -15,7 +15,8 @@ var _SettingsContext = require("../../context/SettingsContext");
 var _LoadingIndicators = require("../../utils/LoadingIndicators");
 var _requests = require("../../utils/requests");
 var _Resolver = require("../../utils/Resolver");
-var _PlotAlert = require("../full-page/PlotAlert");
+var _usePlotVisibility = _interopRequireDefault(require("../../utils/usePlotVisibility"));
+var _PlotAlert = require("../plot/PlotAlert");
 var _Toolbar = require("../toolbar/Toolbar");
 var _jsxRuntime = require("react/jsx-runtime");
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
@@ -26,14 +27,12 @@ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol"
 function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
 function Matrixplot(_ref) {
   let {
-    showObsBtn = false,
-    showVarsBtn = false,
-    showCtrlsBtn = false,
-    setShowObs,
-    setShowVars,
+    setShowCategories,
+    setShowSearch,
     setShowControls,
     plotType,
-    setPlotType
+    setPlotType,
+    isFullscreen = false
   } = _ref;
   const ENDPOINT = 'matrixplot';
   const dataset = (0, _DatasetContext.useDataset)();
@@ -48,18 +47,25 @@ function Matrixplot(_ref) {
   const [hasSelections, setHasSelections] = (0, _react.useState)(false);
   const selectedObs = (0, _Resolver.useSelectedObs)();
   const selectedMultiVar = (0, _Resolver.useSelectedMultiVar)();
-  const params = (0, _react.useMemo)(() => ({
-    url: dataset.url,
-    obsCol: selectedObs,
-    obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
-    varKeys: selectedMultiVar.map(i => i.isSet ? {
-      name: i.name,
-      indices: i.vars.map(v => v.index)
-    } : i.index),
-    obsIndices: isSliced ? [...(obsIndices || [])] : null,
-    standardScale: settings.controls.scale.matrixplot,
-    varNamesCol: dataset.varNamesCol
-  }), [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs, settings.controls.scale.matrixplot]);
+  const {
+    showCategoriesBtn,
+    showSearchBtn
+  } = (0, _usePlotVisibility.default)(isFullscreen);
+  const params = (0, _react.useMemo)(() => {
+    var _selectedObs$omit;
+    return {
+      url: dataset.url,
+      obsCol: selectedObs,
+      obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit = selectedObs.omit) !== null && _selectedObs$omit !== void 0 && _selectedObs$omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
+      varKeys: selectedMultiVar.map(i => i.isSet ? {
+        name: i.name,
+        indices: i.vars.map(v => v.index)
+      } : i.index),
+      obsIndices: isSliced ? [...(obsIndices || [])] : null,
+      standardScale: settings.controls.scale.matrixplot,
+      varNamesCol: dataset.varNamesCol
+    };
+  }, [dataset.url, dataset.varNamesCol, isSliced, obsIndices, selectedMultiVar, selectedObs, settings.controls.scale.matrixplot]);
   (0, _react.useEffect)(() => {
     if (selectedObs && selectedMultiVar.length) {
       setHasSelections(true);
@@ -97,19 +103,21 @@ function Matrixplot(_ref) {
     colorscale.current = settings.controls.colorScale;
     updateColorscale(colorscale.current);
   }, [settings.controls.colorScale, updateColorscale]);
-  const customModeBarButtons = _lodash.default.compact([showObsBtn && (0, _Toolbar.ObsPlotlyToolbar)({
-    onClick: setShowObs
-  }), showVarsBtn && (0, _Toolbar.VarPlotlyToolbar)({
-    onClick: setShowVars
-  }), showCtrlsBtn && (0, _Toolbar.ControlsPlotlyToolbar)({
+  const modeBarButtons = [_lodash.default.compact([(0, _Toolbar.PlotlyModebarControls)({
     onClick: setShowControls
-  })]);
-  const modeBarButtons = customModeBarButtons.length ? [customModeBarButtons, _constants.PLOTLY_MODEBAR_BUTTONS] : [_constants.PLOTLY_MODEBAR_BUTTONS];
+  }), ..._constants.PLOTLY_MODEBAR_BUTTONS])];
   if (!serverError) {
     if (hasSelections) {
       return /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
         className: "cherita-plot cherita-matrixplot position-relative",
-        children: [isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
+        children: [/*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+          className: "plotly-toolbar",
+          children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_Toolbar.PlotlyToolbar, {
+            setShowCategories: setShowCategories,
+            setShowSearch: setShowSearch,
+            isFullscreen: isFullscreen
+          })
+        }), isPending && /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactPlotly.default, {
           data: data,
           layout: layout,
           useResizeHandler: true,
@@ -131,15 +139,15 @@ function Matrixplot(_ref) {
       setPlotType: setPlotType,
       children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("p", {
         className: "p-0 m-0",
-        children: ["Select a", ' ', showObsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        children: ["Select a", ' ', showCategoriesBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowObs,
+          onClick: setShowCategories,
           children: "category"
-        }) : 'category', ' ', "to group observations, then choose one or more", ' ', showVarsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+        }) : 'category', ' ', "to group observations, then choose one or more", ' ', showSearchBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
           variant: "link",
           className: "border-0 p-0 align-baseline",
-          onClick: setShowVars,
+          onClick: setShowSearch,
           children: "features"
         }) : 'features', ' ', "to display the matrix plot."]
       })

package/dist/cjs/components/obs-list/ObsItem.js

@@ -165,7 +165,7 @@ function CategoricalItem(_ref2) {
     getColor
   } = (0, _colorHelper.useColor)();
   return /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
-    className: "virtualized-list-wrapper",
+    className: "virtualized-list-wrapper ps-1",
     children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ListGroup.Item, {
       className: "obs-item",
       children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
@@ -275,7 +275,7 @@ function CategoricalItem(_ref2) {
         })]
       })
     }, value)
-  });
+  }, value);
 }
 function CategoricalObs(_ref3) {
   let {

package/dist/cjs/components/obs-list/ObsList.js

@@ -15,12 +15,12 @@ var _reactBootstrap = require("react-bootstrap");
 var _Accordion = _interopRequireDefault(require("react-bootstrap/Accordion"));
 var _AccordionButton = require("react-bootstrap/AccordionButton");
 var _AccordionContext = _interopRequireDefault(require("react-bootstrap/AccordionContext"));
+var _ObsItem = require("./ObsItem");
 var _constants = require("../../constants/constants");
 var _DatasetContext = require("../../context/DatasetContext");
 var _SettingsContext = require("../../context/SettingsContext");
 var _LoadingIndicators = require("../../utils/LoadingIndicators");
 var _requests = require("../../utils/requests");
-var _ObsItem = require("./ObsItem");
 var _jsxRuntime = require("react/jsx-runtime");
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
 function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
@@ -328,9 +328,12 @@ function ObsColsList(_ref2) {
   if (!serverError) {
     return /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
       className: "position-relative h-100",
-      children: isPending ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}) : !!obsCols && !_lodash.default.size(obsCols) ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Alert, {
-        variant: "danger",
-        children: "No observations found."
+      children: isPending ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_LoadingIndicators.LoadingSpinner, {}) : !!obsCols && !_lodash.default.size(obsCols) ? /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+        className: "p-3",
+        children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Alert, {
+          variant: "danger",
+          children: "No observations found"
+        })
       }) : /*#__PURE__*/(0, _jsxRuntime.jsx)(_Accordion.default, {
         flush: true,
         defaultActiveKey: [...active, ...[defaultActiveGroup]],
@@ -341,6 +344,7 @@ function ObsColsList(_ref2) {
     });
   } else {
     return /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+      className: "p-3",
       children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Alert, {
         variant: "danger",
         children: serverError.message

package/dist/cjs/components/obsm-list/ObsmList.js

@@ -23,7 +23,6 @@ function ObsmKeysList(_ref) {
   const settings = (0, _SettingsContext.useSettings)();
   const dispatch = (0, _SettingsContext.useSettingsDispatch)();
   const [keysList, setKeysList] = (0, _react.useState)([]);
-  const [active, setActive] = (0, _react.useState)(null);
   const params = (0, _react.useMemo)(() => ({
     url: dataset.url
   }), [dataset.url]);
@@ -35,10 +34,9 @@ function ObsmKeysList(_ref) {
     refetchOnMount: false
   });
   (0, _react.useEffect)(() => {
-    if (!isPending && !serverError) {
-      if (!!fetchedData && !fetchedData.length) {
+    if (!isPending && fetchedData && !serverError) {
+      if (!fetchedData.length) {
         setHasObsm(false);
-        setKeysList([]);
         if (settings.selectedObsm) {
           dispatch({
             type: 'select.obsm',
@@ -55,8 +53,6 @@ function ObsmKeysList(_ref) {
               type: 'select.obsm',
               obsm: null
             });
-          } else {
-            setActive(settings.selectedObsm);
           }
         } else {
           // Set default obsm if in keys list and not selected
@@ -73,18 +69,11 @@ function ObsmKeysList(_ref) {
           });
         }
       }
-    } else if (!isPending && serverError) {
-      if (settings.selectedObsm) {
-        dispatch({
-          type: 'select.obsm',
-          obsm: null
-        });
-      }
     }
   }, [dispatch, fetchedData, isPending, serverError, setHasObsm, settings.selectedObsm]);
-  const obsmList = keysList.map(item => {
+  const obsmList = _lodash.default.map(keysList, item => {
     return /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Item, {
-      className: "custom ".concat(active === item && 'active'),
+      className: "custom ".concat(settings.selectedObsm === item && 'active'),
       onClick: () => {
         dispatch({
           type: 'select.obsm',

package/dist/cjs/components/offcanvas/{index.js → OffCanvas.js}

@@ -5,17 +5,20 @@ Object.defineProperty(exports, "__esModule", {
 });
 exports.OffcanvasControls = OffcanvasControls;
 exports.OffcanvasObs = OffcanvasObs;
+exports.OffcanvasObsExplorer = OffcanvasObsExplorer;
 exports.OffcanvasObsm = OffcanvasObsm;
 exports.OffcanvasVars = OffcanvasVars;
 var _Offcanvas = _interopRequireDefault(require("react-bootstrap/Offcanvas"));
 var _constants = require("../../constants/constants");
+var _ObsExplorer = require("../../views/PerturbationMap/ObsExplorer");
 var _ObsList = require("../obs-list/ObsList");
 var _ObsmList = require("../obsm-list/ObsmList");
 var _SearchBar = require("../search-bar/SearchBar");
 var _VarList = require("../var-list/VarList");
 var _jsxRuntime = require("react/jsx-runtime");
 const _excluded = ["show", "handleClose"],
-  _excluded2 = ["show", "handleClose", "Controls"];
+  _excluded2 = ["show", "handleClose", "Controls"],
+  _excluded3 = ["show", "handleClose"];
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
 function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
 function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
@@ -112,4 +115,33 @@ function OffcanvasControls(_ref4) {
       children: /*#__PURE__*/(0, _jsxRuntime.jsx)(Controls, _objectSpread({}, props))
     })]
   });
+}
+function OffcanvasObsExplorer(_ref5) {
+  let {
+      show,
+      handleClose
+    } = _ref5,
+    props = _objectWithoutProperties(_ref5, _excluded3);
+  return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_Offcanvas.default, {
+    show: show,
+    onHide: handleClose,
+    children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_Offcanvas.default.Header, {
+      closeButton: true,
+      children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_Offcanvas.default.Title, {
+        children: "Features"
+      })
+    }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_Offcanvas.default.Body, {
+      children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
+        className: "sidebar-features",
+        children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_SearchBar.SearchBar, {
+          searchDiseases: false,
+          searchVar: false,
+          searchObs: true
+        }), /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+          className: "sidebar-features-list",
+          children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_ObsExplorer.ObsExplorer, _objectSpread({}, props))
+        })]
+      })
+    })]
+  });
 }

package/dist/cjs/components/{full-page → plot}/PlotAlert.js

@@ -34,7 +34,7 @@ function PlotAlert(_ref) {
         className: "w-100 h-100 d-flex justify-content-center align-items-center",
         children: /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Alert, {
           variant: variant,
-          className: "m-0 w-75 w-lg-50 text-center",
+          className: "m-0 my-3 w-75 w-lg-50 text-center",
           children: [heading && /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Alert.Heading, {
             children: heading
           }), " ", children]

package/dist/cjs/components/pseudospatial/Pseudospatial.js

@@ -50,6 +50,7 @@ function usePseudospatialData(plotType) {
   }, [dataset.url, settings.pseudospatial.maskSet, settings.pseudospatial.maskValues, dataset.varNamesCol, isSliced, obsIndices]);
   const getPlotParams = (0, _react.useCallback)(() => {
     if (plotType === _constants.PSEUDOSPATIAL_PLOT_TYPES.GENE) {
+      var _selectedObs$omit;
       return _objectSpread({
         varKey: selectedVar !== null && selectedVar !== void 0 && selectedVar.isSet ? {
           name: selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.name,
@@ -57,18 +58,20 @@ function usePseudospatialData(plotType) {
         } : selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.index
       }, settings.sliceBy.obs ? {
         obsCol: selectedObs,
-        obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit)
+        obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit = selectedObs.omit) !== null && _selectedObs$omit !== void 0 && _selectedObs$omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit)
       } : {});
     } else if (plotType === _constants.PSEUDOSPATIAL_PLOT_TYPES.CATEGORICAL) {
+      var _selectedObs$omit2;
       return {
         obsCol: selectedObs,
-        obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
+        obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit2 = selectedObs.omit) !== null && _selectedObs$omit2 !== void 0 && _selectedObs$omit2.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit),
         mode: settings.pseudospatial.categoricalMode
       };
     } else if (plotType === 'continuous') {
+      var _selectedObs$omit3;
       return {
         obsCol: selectedObs,
-        obsValues: !(selectedObs !== null && selectedObs !== void 0 && selectedObs.omit.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit)
+        obsValues: !(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit3 = selectedObs.omit) !== null && _selectedObs$omit3 !== void 0 && _selectedObs$omit3.length) ? null : _lodash.default.difference(selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.values, selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit)
       };
     }
   }, [settings.pseudospatial.categoricalMode, selectedObs, selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.index, selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.isSet, selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.name, selectedVar === null || selectedVar === void 0 ? void 0 : selectedVar.vars, settings.sliceBy.obs, plotType]);