@haniffalab/cherita-react 1.4.1 → 1.4.2-dev.2025-10-29.e8bbb191

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (138) hide show
  1. package/README.md +1 -1
  2. package/dist/cjs/components/controls/Controls.js +38 -30
  3. package/dist/cjs/components/dotplot/Dotplot.js +67 -69
  4. package/dist/cjs/components/dotplot/DotplotControls.js +103 -83
  5. package/dist/cjs/components/full-page/FullPage.js +100 -74
  6. package/dist/cjs/components/full-page/PlotAlert.js +45 -0
  7. package/dist/cjs/components/full-page/PlotTypeSelector.js +89 -44
  8. package/dist/cjs/components/heatmap/Heatmap.js +65 -65
  9. package/dist/cjs/components/heatmap/HeatmapControls.js +6 -3
  10. package/dist/cjs/components/icons/DotPlotIcon.js +64 -0
  11. package/dist/cjs/components/icons/HeatmapIcon.js +45 -0
  12. package/dist/cjs/components/icons/MatrixPlotIcon.1.js +57 -0
  13. package/dist/cjs/components/icons/MatrixPlotIcon.js +59 -0
  14. package/dist/cjs/components/icons/ScatterplotIcon.1.js +164 -0
  15. package/dist/cjs/components/icons/ScatterplotIcon.js +144 -0
  16. package/dist/cjs/components/icons/ViolinPlotIcon.js +42 -0
  17. package/dist/cjs/components/matrixplot/Matrixplot.js +65 -66
  18. package/dist/cjs/components/matrixplot/MatrixplotControls.js +8 -5
  19. package/dist/cjs/components/obs-list/ObsItem.js +258 -210
  20. package/dist/cjs/components/obs-list/ObsList.js +161 -133
  21. package/dist/cjs/components/obs-list/ObsToolbar.js +2 -3
  22. package/dist/cjs/components/obsm-list/ObsmList.js +53 -38
  23. package/dist/cjs/components/offcanvas/index.js +61 -31
  24. package/dist/cjs/components/pseudospatial/Pseudospatial.js +132 -76
  25. package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +122 -74
  26. package/dist/cjs/components/scatterplot/Scatterplot.js +127 -99
  27. package/dist/cjs/components/scatterplot/ScatterplotControls.js +45 -31
  28. package/dist/cjs/components/scatterplot/SpatialControls.js +140 -113
  29. package/dist/cjs/components/scatterplot/Toolbox.js +41 -30
  30. package/dist/cjs/components/search-bar/SearchBar.js +168 -121
  31. package/dist/cjs/components/search-bar/SearchInfo.js +76 -50
  32. package/dist/cjs/components/search-bar/SearchResults.js +93 -71
  33. package/dist/cjs/components/toolbar/Toolbar.js +46 -37
  34. package/dist/cjs/components/var-list/VarItem.js +115 -88
  35. package/dist/cjs/components/var-list/VarList.js +85 -69
  36. package/dist/cjs/components/var-list/VarListToolbar.js +59 -54
  37. package/dist/cjs/components/var-list/VarSet.js +126 -108
  38. package/dist/cjs/components/violin/Violin.js +109 -107
  39. package/dist/cjs/components/violin/ViolinControls.js +8 -5
  40. package/dist/cjs/constants/colorscales.js +19 -19
  41. package/dist/cjs/constants/constants.js +47 -47
  42. package/dist/cjs/context/DatasetContext.js +24 -16
  43. package/dist/cjs/context/FilterContext.js +11 -9
  44. package/dist/cjs/context/SettingsContext.js +255 -89
  45. package/dist/cjs/context/ZarrDataContext.js +6 -5
  46. package/dist/cjs/helpers/color-helper.js +2 -2
  47. package/dist/cjs/helpers/zarr-helper.js +3 -3
  48. package/dist/cjs/utils/Filter.js +16 -11
  49. package/dist/cjs/utils/Histogram.js +35 -33
  50. package/dist/cjs/utils/ImageViewer.js +11 -8
  51. package/dist/cjs/utils/Legend.js +37 -30
  52. package/dist/cjs/utils/LoadingIndicators.js +15 -13
  53. package/dist/cjs/utils/Resolver.js +213 -0
  54. package/dist/cjs/utils/Skeleton.js +10 -10
  55. package/dist/cjs/utils/StyledTooltip.js +44 -0
  56. package/dist/cjs/utils/VirtualizedList.js +34 -27
  57. package/dist/cjs/utils/errors.js +15 -15
  58. package/dist/cjs/utils/requests.js +21 -9
  59. package/dist/cjs/utils/search.js +4 -4
  60. package/dist/cjs/utils/string.js +6 -6
  61. package/dist/cjs/utils/zarrData.js +20 -21
  62. package/dist/css/cherita.css +64 -42
  63. package/dist/css/cherita.css.map +1 -1
  64. package/dist/esm/components/controls/Controls.js +43 -35
  65. package/dist/esm/components/dotplot/Dotplot.js +77 -78
  66. package/dist/esm/components/dotplot/DotplotControls.js +106 -85
  67. package/dist/esm/components/full-page/FullPage.js +120 -93
  68. package/dist/esm/components/full-page/PlotAlert.js +39 -0
  69. package/dist/esm/components/full-page/PlotTypeSelector.js +90 -45
  70. package/dist/esm/components/heatmap/Heatmap.js +75 -74
  71. package/dist/esm/components/heatmap/HeatmapControls.js +8 -4
  72. package/dist/esm/components/icons/DotPlotIcon.js +58 -0
  73. package/dist/esm/components/icons/HeatmapIcon.js +39 -0
  74. package/dist/esm/components/icons/MatrixPlotIcon.1.js +51 -0
  75. package/dist/esm/components/icons/MatrixPlotIcon.js +53 -0
  76. package/dist/esm/components/icons/ScatterplotIcon.1.js +158 -0
  77. package/dist/esm/components/icons/ScatterplotIcon.js +138 -0
  78. package/dist/esm/components/icons/ViolinPlotIcon.js +36 -0
  79. package/dist/esm/components/matrixplot/Matrixplot.js +75 -75
  80. package/dist/esm/components/matrixplot/MatrixplotControls.js +10 -6
  81. package/dist/esm/components/obs-list/ObsItem.js +273 -222
  82. package/dist/esm/components/obs-list/ObsList.js +176 -147
  83. package/dist/esm/components/obs-list/ObsToolbar.js +3 -3
  84. package/dist/esm/components/obsm-list/ObsmList.js +60 -44
  85. package/dist/esm/components/offcanvas/index.js +67 -37
  86. package/dist/esm/components/pseudospatial/Pseudospatial.js +145 -88
  87. package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +127 -78
  88. package/dist/esm/components/scatterplot/Scatterplot.js +148 -119
  89. package/dist/esm/components/scatterplot/ScatterplotControls.js +50 -35
  90. package/dist/esm/components/scatterplot/SpatialControls.js +153 -125
  91. package/dist/esm/components/scatterplot/Toolbox.js +44 -32
  92. package/dist/esm/components/search-bar/SearchBar.js +180 -132
  93. package/dist/esm/components/search-bar/SearchInfo.js +86 -59
  94. package/dist/esm/components/search-bar/SearchResults.js +100 -77
  95. package/dist/esm/components/toolbar/Toolbar.js +49 -39
  96. package/dist/esm/components/var-list/VarItem.js +126 -98
  97. package/dist/esm/components/var-list/VarList.js +99 -82
  98. package/dist/esm/components/var-list/VarListToolbar.js +64 -58
  99. package/dist/esm/components/var-list/VarSet.js +134 -115
  100. package/dist/esm/components/violin/Violin.js +121 -118
  101. package/dist/esm/components/violin/ViolinControls.js +10 -6
  102. package/dist/esm/constants/colorscales.js +19 -19
  103. package/dist/esm/constants/constants.js +47 -47
  104. package/dist/esm/context/DatasetContext.js +31 -22
  105. package/dist/esm/context/FilterContext.js +11 -8
  106. package/dist/esm/context/SettingsContext.js +257 -90
  107. package/dist/esm/context/ZarrDataContext.js +8 -6
  108. package/dist/esm/helpers/color-helper.js +5 -5
  109. package/dist/esm/helpers/map-helper.js +2 -2
  110. package/dist/esm/helpers/zarr-helper.js +6 -6
  111. package/dist/esm/index.js +22 -22
  112. package/dist/esm/utils/Filter.js +22 -17
  113. package/dist/esm/utils/Histogram.js +39 -37
  114. package/dist/esm/utils/ImageViewer.js +12 -8
  115. package/dist/esm/utils/Legend.js +44 -36
  116. package/dist/esm/utils/LoadingIndicators.js +16 -13
  117. package/dist/esm/utils/Resolver.js +201 -0
  118. package/dist/esm/utils/Skeleton.js +11 -10
  119. package/dist/esm/utils/StyledTooltip.js +38 -0
  120. package/dist/esm/utils/VirtualizedList.js +35 -27
  121. package/dist/esm/utils/errors.js +15 -15
  122. package/dist/esm/utils/requests.js +24 -12
  123. package/dist/esm/utils/search.js +7 -7
  124. package/dist/esm/utils/string.js +7 -7
  125. package/dist/esm/utils/zarrData.js +27 -28
  126. package/package.json +21 -9
  127. package/scss/cherita-bootstrap.scss +2 -2
  128. package/scss/cherita.scss +43 -17
  129. package/scss/components/accordions.scss +4 -1
  130. package/scss/components/layouts.scss +15 -33
  131. package/scss/components/lists.scss +8 -4
  132. package/scss/components/plotly.scss +38 -26
  133. package/scss/components/plots.scss +14 -1
  134. package/dist/assets/images/plots/dotplot.svg +0 -152
  135. package/dist/assets/images/plots/heatmap.svg +0 -193
  136. package/dist/assets/images/plots/matrixplot.svg +0 -275
  137. package/dist/assets/images/plots/scatterplot.svg +0 -198
  138. package/dist/assets/images/plots/violin.svg +0 -50
@@ -1,6 +1,10 @@
1
- import React from "react";
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- import { Form } from "react-bootstrap";
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- import { ColorscaleSelect } from "../controls/Controls";
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+ import { Form } from 'react-bootstrap';
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+ import { ColorscaleSelect } from '../controls/Controls';
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+ import { jsx as _jsx, Fragment as _Fragment } from "react/jsx-runtime";
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  export function HeatmapControls() {
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- return /*#__PURE__*/React.createElement(React.Fragment, null, /*#__PURE__*/React.createElement(Form, null, /*#__PURE__*/React.createElement(ColorscaleSelect, null)));
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+ return /*#__PURE__*/_jsx(_Fragment, {
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+ children: /*#__PURE__*/_jsx(Form, {
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+ children: /*#__PURE__*/_jsx(ColorscaleSelect, {})
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+ })
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+ });
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  }
@@ -0,0 +1,58 @@
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+ const _excluded = ["size", "colour", "gap"];
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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+ import { jsx as _jsx } from "react/jsx-runtime";
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+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
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+ export default function DotPlotIcon(_ref) {
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+ let {
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+ size = 40,
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+ colour = '#000',
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+ gap = 20
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+ } = _ref,
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+ props = _objectWithoutProperties(_ref, _excluded);
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+ const rows = 3;
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+ const cols = 3;
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+
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+ // Define two radii: small and large
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+ const smallR = 10;
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+ const largeR = 16;
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+
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+ // Indices for large circles
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+ const largeIndices = [1, 4, 5, 6, 7];
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+
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+ // Indices for semi-transparent circles
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+ const semiTransparentIndices = [0, 4, 8];
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+ const circles = [];
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+ for (let row = 0; row < rows; row++) {
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+ for (let col = 0; col < cols; col++) {
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+ const index = row * cols + col;
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+ const r = largeIndices.includes(index) ? largeR : smallR;
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+ circles.push({
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+ cx: col * (2 * largeR + gap) + largeR,
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+ cy: row * (2 * largeR + gap) + largeR,
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+ r,
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+ fill: colour,
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+ fillOpacity: semiTransparentIndices.includes(index) ? 0.5 : 1
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+ });
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+ }
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+ }
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+ const viewBoxSize = (cols - 1) * (2 * largeR + gap) + 2 * largeR;
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+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
45
+ width: size,
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+ height: size,
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+ viewBox: "0 0 ".concat(viewBoxSize, " ").concat(viewBoxSize),
48
+ xmlns: "http://www.w3.org/2000/svg"
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+ }, props), {}, {
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+ children: circles.map((circle, i) => /*#__PURE__*/_jsx("circle", {
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+ cx: circle.cx,
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+ cy: circle.cy,
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+ r: circle.r,
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+ fill: circle.fill,
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+ fillOpacity: circle.fillOpacity
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+ }, i))
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+ }));
58
+ }
@@ -0,0 +1,39 @@
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+ const _excluded = ["size", "colour", "gap"];
2
+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
3
+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
4
+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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+ import { jsx as _jsx } from "react/jsx-runtime";
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+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
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+ export default function HeatmapIcon(_ref) {
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+ let {
12
+ size = 40,
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+ colour = '#000',
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+ gap = 1
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+ } = _ref,
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+ props = _objectWithoutProperties(_ref, _excluded);
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+ const rows = 6; // genes
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+ const cols = 8; // cells
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+
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+ // Example expression pattern for visual clusters
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+ const expressionLevels = [[1, 0.8, 0.2, 0.2, 0.5, 0.9, 1, 0.7], [0.9, 0.7, 0.1, 0.2, 0.4, 0.8, 0.9, 0.6], [0.1, 0.2, 0.8, 0.9, 0.7, 0.2, 0.1, 0.3], [0.2, 0.3, 0.9, 1, 0.8, 0.3, 0.2, 0.4], [0.5, 0.6, 0.2, 0.1, 0.9, 0.7, 0.6, 0.8], [0.6, 0.7, 0.3, 0.2, 0.8, 0.6, 0.7, 0.9]];
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+ const cellWidth = (size - (cols - 1) * gap) / cols;
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+ const cellHeight = (size - (rows - 1) * gap) / rows;
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+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
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+ width: size,
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+ height: size,
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+ viewBox: "0 0 ".concat(size, " ").concat(size),
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+ xmlns: "http://www.w3.org/2000/svg"
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+ }, props), {}, {
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+ children: expressionLevels.map((row, rowIndex) => row.map((value, colIndex) => /*#__PURE__*/_jsx("rect", {
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+ x: colIndex * (cellWidth + gap),
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+ y: rowIndex * (cellHeight + gap),
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+ width: cellWidth,
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+ height: cellHeight,
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+ fill: colour,
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+ fillOpacity: value
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+ }, "".concat(rowIndex, "-").concat(colIndex))))
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+ }));
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+ }
@@ -0,0 +1,51 @@
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+ const _excluded = ["size", "colour", "gap"];
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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+ import { jsx as _jsx } from "react/jsx-runtime";
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+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
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+ export default function MatrixPlotIcon(_ref) {
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+ let {
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+ size = 40,
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+ colour = '#000',
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+ gap = 2
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+ } = _ref,
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+ props = _objectWithoutProperties(_ref, _excluded);
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+ const rows = 4;
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+ const cols = 4;
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+ const squareSize = (size - gap * (cols - 1)) / cols;
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+ const squares = [];
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+ for (let row = 0; row < rows; row++) {
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+ for (let col = 0; col < cols; col++) {
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+ squares.push({
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+ x: col * (squareSize + gap),
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+ y: row * (squareSize + gap)
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+ });
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+ }
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+ }
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+ const semiTransparentSquares = [0, 5, 10, 15];
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+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
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+ width: size,
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+ height: size,
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+ viewBox: "0 0 ".concat(size, " ").concat(size),
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+ xmlns: "http://www.w3.org/2000/svg"
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+ }, props), {}, {
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+ children: squares.map((_ref2, i) => {
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+ let {
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+ x,
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+ y
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+ } = _ref2;
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+ return /*#__PURE__*/_jsx("rect", {
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+ x: x,
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+ y: y,
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+ width: squareSize,
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+ height: squareSize,
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+ fill: colour,
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+ fillOpacity: semiTransparentSquares.includes(i) ? 0.5 : 1
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+ }, i);
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+ })
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+ }));
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+ }
@@ -0,0 +1,53 @@
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+ const _excluded = ["size", "colour", "gap"];
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
4
+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
5
+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
6
+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
7
+ import { jsx as _jsx } from "react/jsx-runtime";
8
+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
10
+ export default function MatrixPlotIcon(_ref) {
11
+ let {
12
+ size = 40,
13
+ colour = '#000',
14
+ gap = 2
15
+ } = _ref,
16
+ props = _objectWithoutProperties(_ref, _excluded);
17
+ const rows = 3;
18
+ const cols = 3;
19
+ const squareSize = (size - gap * (cols - 1)) / cols;
20
+ const squares = [];
21
+ for (let row = 0; row < rows; row++) {
22
+ for (let col = 0; col < cols; col++) {
23
+ squares.push({
24
+ x: col * (squareSize + gap),
25
+ y: row * (squareSize + gap)
26
+ });
27
+ }
28
+ }
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+
30
+ // Example: corners semi-transparent
31
+ const semiTransparentSquares = [0, 2, 6, 8];
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+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
33
+ width: size,
34
+ height: size,
35
+ viewBox: "0 0 ".concat(size, " ").concat(size),
36
+ xmlns: "http://www.w3.org/2000/svg"
37
+ }, props), {}, {
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+ children: squares.map((_ref2, i) => {
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+ let {
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+ x,
41
+ y
42
+ } = _ref2;
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+ return /*#__PURE__*/_jsx("rect", {
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+ x: x,
45
+ y: y,
46
+ width: squareSize,
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+ height: squareSize,
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+ fill: colour,
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+ fillOpacity: semiTransparentSquares.includes(i) ? 0.5 : 1
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+ }, i);
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+ })
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+ }));
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+ }
@@ -0,0 +1,158 @@
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+ const _excluded = ["size", "colour"];
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
4
+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
5
+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
6
+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
7
+ import { jsx as _jsx } from "react/jsx-runtime";
8
+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
9
+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
10
+ export default function ScatterplotIcon(_ref) {
11
+ let {
12
+ size = 40,
13
+ colour = '#000'
14
+ } = _ref,
15
+ props = _objectWithoutProperties(_ref, _excluded);
16
+ // Points with cluster assignments
17
+ const points = [
18
+ // Cluster 0
19
+ {
20
+ x: 15.2,
21
+ y: 35.9,
22
+ cluster: 0
23
+ }, {
24
+ x: 10.0,
25
+ y: 38.0,
26
+ cluster: 0
27
+ }, {
28
+ x: 12.3,
29
+ y: 40.7,
30
+ cluster: 0
31
+ }, {
32
+ x: 15.7,
33
+ y: 39.9,
34
+ cluster: 0
35
+ }, {
36
+ x: 8.1,
37
+ y: 42.2,
38
+ cluster: 0
39
+ }, {
40
+ x: 10.8,
41
+ y: 44.5,
42
+ cluster: 0
43
+ }, {
44
+ x: 14.3,
45
+ y: 44.6,
46
+ cluster: 0
47
+ }, {
48
+ x: 7.4,
49
+ y: 46.7,
50
+ cluster: 0
51
+ }, {
52
+ x: 11.1,
53
+ y: 48.8,
54
+ cluster: 0
55
+ }, {
56
+ x: 14.8,
57
+ y: 48.5,
58
+ cluster: 0
59
+ }, {
60
+ x: 12.6,
61
+ y: 52.1,
62
+ cluster: 0
63
+ },
64
+ // Cluster 1
65
+ {
66
+ x: 29.4,
67
+ y: 37.0,
68
+ cluster: 1
69
+ }, {
70
+ x: 26.1,
71
+ y: 40.2,
72
+ cluster: 1
73
+ }, {
74
+ x: 29.8,
75
+ y: 42.0,
76
+ cluster: 1
77
+ }, {
78
+ x: 33.0,
79
+ y: 39.5,
80
+ cluster: 1
81
+ }, {
82
+ x: 34.9,
83
+ y: 43.6,
84
+ cluster: 1
85
+ }, {
86
+ x: 31.5,
87
+ y: 46.2,
88
+ cluster: 1
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+ }, {
90
+ x: 29.3,
91
+ y: 49.5,
92
+ cluster: 1
93
+ }, {
94
+ x: 26.7,
95
+ y: 45.2,
96
+ cluster: 1
97
+ },
98
+ // Cluster 2
99
+ {
100
+ x: 21.6,
101
+ y: 53.1,
102
+ cluster: 2
103
+ }, {
104
+ x: 25.3,
105
+ y: 53.9,
106
+ cluster: 2
107
+ }, {
108
+ x: 25.8,
109
+ y: 57.9,
110
+ cluster: 2
111
+ }, {
112
+ x: 22.1,
113
+ y: 57.4,
114
+ cluster: 2
115
+ }, {
116
+ x: 18.4,
117
+ y: 56.0,
118
+ cluster: 2
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+ }, {
120
+ x: 18.6,
121
+ y: 59.8,
122
+ cluster: 2
123
+ }, {
124
+ x: 22.5,
125
+ y: 61.7,
126
+ cluster: 2
127
+ }];
128
+ const radius = 1.8;
129
+ const opacity = 1.0; // uniform expression
130
+
131
+ // Compute viewBox dynamically
132
+ const xs = points.map(p => p.x);
133
+ const ys = points.map(p => p.y);
134
+ const minX = Math.min(...xs) - radius;
135
+ const minY = Math.min(...ys) - radius;
136
+ const maxX = Math.max(...xs) + radius;
137
+ const maxY = Math.max(...ys) + radius;
138
+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
139
+ width: size,
140
+ height: size,
141
+ viewBox: "".concat(minX, " ").concat(minY, " ").concat(maxX - minX, " ").concat(maxY - minY),
142
+ xmlns: "http://www.w3.org/2000/svg"
143
+ }, props), {}, {
144
+ children: points.map((_ref2, i) => {
145
+ let {
146
+ x,
147
+ y
148
+ } = _ref2;
149
+ return /*#__PURE__*/_jsx("circle", {
150
+ cx: x,
151
+ cy: y,
152
+ r: radius,
153
+ fill: colour,
154
+ opacity: opacity
155
+ }, i);
156
+ })
157
+ }));
158
+ }
@@ -0,0 +1,138 @@
1
+ const _excluded = ["size", "colour"];
2
+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
3
+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
4
+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
5
+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
6
+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
7
+ import { jsx as _jsx } from "react/jsx-runtime";
8
+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
10
+ export default function ScatterplotIcon(_ref) {
11
+ let {
12
+ size = 40,
13
+ colour = '#000'
14
+ } = _ref,
15
+ props = _objectWithoutProperties(_ref, _excluded);
16
+ // Points with cluster assignments
17
+ const points = [
18
+ // Cluster 0
19
+ {
20
+ x: 15.2,
21
+ y: 35.9,
22
+ cluster: 0
23
+ }, {
24
+ x: 10.0,
25
+ y: 38.0,
26
+ cluster: 0
27
+ }, {
28
+ x: 12.3,
29
+ y: 40.7,
30
+ cluster: 0
31
+ }, {
32
+ x: 15.7,
33
+ y: 39.9,
34
+ cluster: 0
35
+ }, {
36
+ x: 8.1,
37
+ y: 42.2,
38
+ cluster: 0
39
+ }, {
40
+ x: 10.8,
41
+ y: 44.5,
42
+ cluster: 0
43
+ }, {
44
+ x: 14.3,
45
+ y: 44.6,
46
+ cluster: 0
47
+ }, {
48
+ x: 7.4,
49
+ y: 46.7,
50
+ cluster: 0
51
+ }, {
52
+ x: 11.1,
53
+ y: 48.8,
54
+ cluster: 0
55
+ },
56
+ // Cluster 1
57
+ {
58
+ x: 29.4,
59
+ y: 37.0,
60
+ cluster: 1
61
+ }, {
62
+ x: 26.1,
63
+ y: 40.2,
64
+ cluster: 1
65
+ }, {
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+ x: 29.8,
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+ y: 42.0,
68
+ cluster: 1
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+ }, {
70
+ x: 33.0,
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+ y: 39.5,
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+ cluster: 1
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+ }, {
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+ x: 34.9,
75
+ y: 43.6,
76
+ cluster: 1
77
+ }, {
78
+ x: 31.5,
79
+ y: 46.2,
80
+ cluster: 1
81
+ },
82
+ // Cluster 2
83
+ {
84
+ x: 21.6,
85
+ y: 53.1,
86
+ cluster: 2
87
+ }, {
88
+ x: 25.3,
89
+ y: 53.9,
90
+ cluster: 2
91
+ }, {
92
+ x: 25.8,
93
+ y: 57.9,
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+ cluster: 2
95
+ }, {
96
+ x: 22.1,
97
+ y: 57.4,
98
+ cluster: 2
99
+ }, {
100
+ x: 18.4,
101
+ y: 56.0,
102
+ cluster: 2
103
+ }, {
104
+ x: 22.5,
105
+ y: 61.7,
106
+ cluster: 2
107
+ }];
108
+ const radius = 1.8;
109
+ const opacity = 1.0; // uniform expression
110
+
111
+ // Compute viewBox dynamically
112
+ const xs = points.map(p => p.x);
113
+ const ys = points.map(p => p.y);
114
+ const minX = Math.min(...xs) - radius;
115
+ const minY = Math.min(...ys) - radius;
116
+ const maxX = Math.max(...xs) + radius;
117
+ const maxY = Math.max(...ys) + radius;
118
+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
119
+ width: size,
120
+ height: size,
121
+ viewBox: "".concat(minX, " ").concat(minY, " ").concat(maxX - minX, " ").concat(maxY - minY),
122
+ xmlns: "http://www.w3.org/2000/svg"
123
+ }, props), {}, {
124
+ children: points.map((_ref2, i) => {
125
+ let {
126
+ x,
127
+ y
128
+ } = _ref2;
129
+ return /*#__PURE__*/_jsx("circle", {
130
+ cx: x,
131
+ cy: y,
132
+ r: radius,
133
+ fill: colour,
134
+ opacity: opacity
135
+ }, i);
136
+ })
137
+ }));
138
+ }
@@ -0,0 +1,36 @@
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+ const _excluded = ["size", "colour"];
2
+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
4
+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
5
+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
6
+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
7
+ import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
8
+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
10
+ export default function ViolinPlotIcon(_ref) {
11
+ let {
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+ size = 40,
13
+ colour = '#000'
14
+ } = _ref,
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+ props = _objectWithoutProperties(_ref, _excluded);
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+ return /*#__PURE__*/_jsx("svg", _objectSpread(_objectSpread({
17
+ viewBox: "0 0 37 40",
18
+ width: size,
19
+ height: size,
20
+ xmlns: "http://www.w3.org/2000/svg"
21
+ }, props), {}, {
22
+ children: /*#__PURE__*/_jsxs("g", {
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+ fill: colour,
24
+ stroke: colour,
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+ strokeWidth: "0.5",
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+ transform: "translate(-12 -8)",
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+ children: [/*#__PURE__*/_jsx("path", {
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+ d: "M19.9971,24.5 A6.3078,6.3078 0 0 0 18.5732,20.8389 7.1479,7.1479 0 0 1 16.9971,16.5 V16.0029 H16.0029 V16.5 a7.1479,7.1479 0 0 1 -1.5761,4.3389 6.3078,6.3078 0 0 0 -1.4239,3.6611 12.4967,12.4967 0 0 1 -0.4853,3.38 13.5076,13.5076 0 0 0 -0.5147,3.62 6.3078,6.3078 0 0 0 1.4239,3.6611 7.1479,7.1479 0 0 1 1.5761,4.3389 19.2486,19.2486 0 0 0 0.5664,4.7246 13.6883,13.6883 0 0 1 0.4336,3.2754 v0.4971 h0.9942 V47.5 A13.6883,13.6883 0 0 1 17.4307,44.2246 19.2486,19.2486 0 0 0 17.9971,39.5 7.1479,7.1479 0 0 1 19.5732,35.1611 6.3078,6.3078 0 0 0 20.9971,31.5 13.5076,13.5076 0 0 0 20.4824,27.88 12.4967,12.4967 0 0 1 19.9971,24.5 Z"
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+ d: "M34.6436,12.6963 C32.8506,11.5537 30.9971,10.3711 30.9971,8.5 V8.0029 H30.0029 V8.5 c0,1.8711 -1.8535,3.0537 -3.6465,4.1963 -1.7246,1.1006 -3.3535,2.1387 -3.3535,3.8037 0,1.6152 1.2188,2.7031 2.3975,3.7549 1.2793,1.1426 2.6025,2.3242 2.6025,4.2451 a18.1508,18.1508 0 0 1 -0.542,4.5068 14.5,14.5 0 0 0 -0.458,3.4932 6.038,6.038 0 0 0 1.6,3.7979 5.179,5.179 0 0 1 1.4,3.2021 v0.4971 h0.9942 V39.5 a5.179,5.179 0 0 1 1.4,-3.2021 6.038,6.038 0 0 0 1.6,-3.7979 14.5,14.5 0 0 0 -0.458,-3.4932 18.1508,18.1508 0 0 1 -0.542,-4.5068 c0,-1.9209 1.3232,-3.1025 2.6025,-4.2451 1.1787,-1.0518 2.3975,-2.14 2.3975,-3.7549 0,-1.665 -1.6289,-2.7031 -3.3535,-3.8037 z"
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+ })]
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+ })
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+ }));
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+ }