@haniffalab/cherita-react 1.4.1 → 1.4.2-dev.2025-10-29.81a6b906

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (138) hide show
  1. package/README.md +1 -1
  2. package/dist/cjs/components/controls/Controls.js +38 -30
  3. package/dist/cjs/components/dotplot/Dotplot.js +67 -69
  4. package/dist/cjs/components/dotplot/DotplotControls.js +103 -83
  5. package/dist/cjs/components/full-page/FullPage.js +100 -74
  6. package/dist/cjs/components/full-page/PlotAlert.js +45 -0
  7. package/dist/cjs/components/full-page/PlotTypeSelector.js +89 -44
  8. package/dist/cjs/components/heatmap/Heatmap.js +65 -65
  9. package/dist/cjs/components/heatmap/HeatmapControls.js +6 -3
  10. package/dist/cjs/components/icons/DotPlotIcon.js +64 -0
  11. package/dist/cjs/components/icons/HeatmapIcon.js +45 -0
  12. package/dist/cjs/components/icons/MatrixPlotIcon.1.js +57 -0
  13. package/dist/cjs/components/icons/MatrixPlotIcon.js +59 -0
  14. package/dist/cjs/components/icons/ScatterplotIcon.1.js +164 -0
  15. package/dist/cjs/components/icons/ScatterplotIcon.js +144 -0
  16. package/dist/cjs/components/icons/ViolinPlotIcon.js +42 -0
  17. package/dist/cjs/components/matrixplot/Matrixplot.js +65 -66
  18. package/dist/cjs/components/matrixplot/MatrixplotControls.js +8 -5
  19. package/dist/cjs/components/obs-list/ObsItem.js +258 -210
  20. package/dist/cjs/components/obs-list/ObsList.js +161 -133
  21. package/dist/cjs/components/obs-list/ObsToolbar.js +2 -3
  22. package/dist/cjs/components/obsm-list/ObsmList.js +53 -38
  23. package/dist/cjs/components/offcanvas/index.js +61 -31
  24. package/dist/cjs/components/pseudospatial/Pseudospatial.js +132 -76
  25. package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +122 -74
  26. package/dist/cjs/components/scatterplot/Scatterplot.js +127 -99
  27. package/dist/cjs/components/scatterplot/ScatterplotControls.js +45 -31
  28. package/dist/cjs/components/scatterplot/SpatialControls.js +140 -113
  29. package/dist/cjs/components/scatterplot/Toolbox.js +41 -30
  30. package/dist/cjs/components/search-bar/SearchBar.js +168 -121
  31. package/dist/cjs/components/search-bar/SearchInfo.js +76 -50
  32. package/dist/cjs/components/search-bar/SearchResults.js +93 -71
  33. package/dist/cjs/components/toolbar/Toolbar.js +46 -37
  34. package/dist/cjs/components/var-list/VarItem.js +115 -88
  35. package/dist/cjs/components/var-list/VarList.js +85 -69
  36. package/dist/cjs/components/var-list/VarListToolbar.js +59 -54
  37. package/dist/cjs/components/var-list/VarSet.js +126 -108
  38. package/dist/cjs/components/violin/Violin.js +109 -107
  39. package/dist/cjs/components/violin/ViolinControls.js +8 -5
  40. package/dist/cjs/constants/colorscales.js +19 -19
  41. package/dist/cjs/constants/constants.js +47 -47
  42. package/dist/cjs/context/DatasetContext.js +24 -16
  43. package/dist/cjs/context/FilterContext.js +11 -9
  44. package/dist/cjs/context/SettingsContext.js +255 -89
  45. package/dist/cjs/context/ZarrDataContext.js +6 -5
  46. package/dist/cjs/helpers/color-helper.js +2 -2
  47. package/dist/cjs/helpers/zarr-helper.js +3 -3
  48. package/dist/cjs/utils/Filter.js +16 -11
  49. package/dist/cjs/utils/Histogram.js +35 -33
  50. package/dist/cjs/utils/ImageViewer.js +11 -8
  51. package/dist/cjs/utils/Legend.js +37 -30
  52. package/dist/cjs/utils/LoadingIndicators.js +15 -13
  53. package/dist/cjs/utils/Resolver.js +213 -0
  54. package/dist/cjs/utils/Skeleton.js +10 -10
  55. package/dist/cjs/utils/StyledTooltip.js +44 -0
  56. package/dist/cjs/utils/VirtualizedList.js +34 -27
  57. package/dist/cjs/utils/errors.js +15 -15
  58. package/dist/cjs/utils/requests.js +21 -9
  59. package/dist/cjs/utils/search.js +4 -4
  60. package/dist/cjs/utils/string.js +6 -6
  61. package/dist/cjs/utils/zarrData.js +20 -21
  62. package/dist/css/cherita.css +64 -42
  63. package/dist/css/cherita.css.map +1 -1
  64. package/dist/esm/components/controls/Controls.js +43 -35
  65. package/dist/esm/components/dotplot/Dotplot.js +77 -78
  66. package/dist/esm/components/dotplot/DotplotControls.js +106 -85
  67. package/dist/esm/components/full-page/FullPage.js +120 -93
  68. package/dist/esm/components/full-page/PlotAlert.js +39 -0
  69. package/dist/esm/components/full-page/PlotTypeSelector.js +90 -45
  70. package/dist/esm/components/heatmap/Heatmap.js +75 -74
  71. package/dist/esm/components/heatmap/HeatmapControls.js +8 -4
  72. package/dist/esm/components/icons/DotPlotIcon.js +58 -0
  73. package/dist/esm/components/icons/HeatmapIcon.js +39 -0
  74. package/dist/esm/components/icons/MatrixPlotIcon.1.js +51 -0
  75. package/dist/esm/components/icons/MatrixPlotIcon.js +53 -0
  76. package/dist/esm/components/icons/ScatterplotIcon.1.js +158 -0
  77. package/dist/esm/components/icons/ScatterplotIcon.js +138 -0
  78. package/dist/esm/components/icons/ViolinPlotIcon.js +36 -0
  79. package/dist/esm/components/matrixplot/Matrixplot.js +75 -75
  80. package/dist/esm/components/matrixplot/MatrixplotControls.js +10 -6
  81. package/dist/esm/components/obs-list/ObsItem.js +273 -222
  82. package/dist/esm/components/obs-list/ObsList.js +176 -147
  83. package/dist/esm/components/obs-list/ObsToolbar.js +3 -3
  84. package/dist/esm/components/obsm-list/ObsmList.js +60 -44
  85. package/dist/esm/components/offcanvas/index.js +67 -37
  86. package/dist/esm/components/pseudospatial/Pseudospatial.js +145 -88
  87. package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +127 -78
  88. package/dist/esm/components/scatterplot/Scatterplot.js +148 -119
  89. package/dist/esm/components/scatterplot/ScatterplotControls.js +50 -35
  90. package/dist/esm/components/scatterplot/SpatialControls.js +153 -125
  91. package/dist/esm/components/scatterplot/Toolbox.js +44 -32
  92. package/dist/esm/components/search-bar/SearchBar.js +180 -132
  93. package/dist/esm/components/search-bar/SearchInfo.js +86 -59
  94. package/dist/esm/components/search-bar/SearchResults.js +100 -77
  95. package/dist/esm/components/toolbar/Toolbar.js +49 -39
  96. package/dist/esm/components/var-list/VarItem.js +126 -98
  97. package/dist/esm/components/var-list/VarList.js +99 -82
  98. package/dist/esm/components/var-list/VarListToolbar.js +64 -58
  99. package/dist/esm/components/var-list/VarSet.js +134 -115
  100. package/dist/esm/components/violin/Violin.js +121 -118
  101. package/dist/esm/components/violin/ViolinControls.js +10 -6
  102. package/dist/esm/constants/colorscales.js +19 -19
  103. package/dist/esm/constants/constants.js +47 -47
  104. package/dist/esm/context/DatasetContext.js +31 -22
  105. package/dist/esm/context/FilterContext.js +11 -8
  106. package/dist/esm/context/SettingsContext.js +257 -90
  107. package/dist/esm/context/ZarrDataContext.js +8 -6
  108. package/dist/esm/helpers/color-helper.js +5 -5
  109. package/dist/esm/helpers/map-helper.js +2 -2
  110. package/dist/esm/helpers/zarr-helper.js +6 -6
  111. package/dist/esm/index.js +22 -22
  112. package/dist/esm/utils/Filter.js +22 -17
  113. package/dist/esm/utils/Histogram.js +39 -37
  114. package/dist/esm/utils/ImageViewer.js +12 -8
  115. package/dist/esm/utils/Legend.js +44 -36
  116. package/dist/esm/utils/LoadingIndicators.js +16 -13
  117. package/dist/esm/utils/Resolver.js +201 -0
  118. package/dist/esm/utils/Skeleton.js +11 -10
  119. package/dist/esm/utils/StyledTooltip.js +38 -0
  120. package/dist/esm/utils/VirtualizedList.js +35 -27
  121. package/dist/esm/utils/errors.js +15 -15
  122. package/dist/esm/utils/requests.js +24 -12
  123. package/dist/esm/utils/search.js +7 -7
  124. package/dist/esm/utils/string.js +7 -7
  125. package/dist/esm/utils/zarrData.js +27 -28
  126. package/package.json +21 -9
  127. package/scss/cherita-bootstrap.scss +2 -2
  128. package/scss/cherita.scss +43 -17
  129. package/scss/components/accordions.scss +4 -1
  130. package/scss/components/layouts.scss +15 -33
  131. package/scss/components/lists.scss +8 -4
  132. package/scss/components/plotly.scss +38 -26
  133. package/scss/components/plots.scss +14 -1
  134. package/dist/assets/images/plots/dotplot.svg +0 -152
  135. package/dist/assets/images/plots/heatmap.svg +0 -193
  136. package/dist/assets/images/plots/matrixplot.svg +0 -275
  137. package/dist/assets/images/plots/scatterplot.svg +0 -198
  138. package/dist/assets/images/plots/violin.svg +0 -50
@@ -1,6 +1,7 @@
1
- import React, { createContext, useContext } from "react";
2
- import { useFilter } from "../utils/Filter";
3
- import { useObsData, useObsmData, useXData } from "../utils/zarrData";
1
+ import { createContext, useContext } from 'react';
2
+ import { useFilter } from '../utils/Filter';
3
+ import { useObsData, useObsmData, useXData } from '../utils/zarrData';
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+ import { jsx as _jsx } from "react/jsx-runtime";
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  const ZarrDataContext = /*#__PURE__*/createContext(null);
5
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  export function ZarrDataProvider(_ref) {
6
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  let {
@@ -17,9 +18,10 @@ export function ZarrDataProvider(_ref) {
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  serverError: obsmData.serverError || obsData.serverError || xData.serverError
18
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  };
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  useFilter(data);
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- return /*#__PURE__*/React.createElement(ZarrDataContext.Provider, {
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- value: data
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- }, children);
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+ return /*#__PURE__*/_jsx(ZarrDataContext.Provider, {
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+ value: data,
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+ children: children
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+ });
23
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  }
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  export function useZarrData() {
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  return useContext(ZarrDataContext);
@@ -1,6 +1,6 @@
1
- import { useCallback } from "react";
2
- import { COLORSCALES } from "../constants/colorscales";
3
- import { useSettings } from "../context/SettingsContext";
1
+ import { useCallback } from 'react';
2
+ import { COLORSCALES } from '../constants/colorscales';
3
+ import { useSettings } from '../context/SettingsContext';
4
4
  const GRAY = [214, 212, 212];
5
5
  const parseHexColor = color => {
6
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  const r = parseInt(color === null || color === void 0 ? void 0 : color.substring(1, 3), 16);
@@ -31,7 +31,7 @@ const computeColor = (colormap, value) => {
31
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  };
32
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  export const rgbToHex = color => {
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  const [r, g, b] = color || [0, 0, 0, 0];
34
- return "#" + ((1 << 24) + (r << 16) + (g << 8) + b).toString(16).slice(1);
34
+ return '#' + ((1 << 24) + (r << 16) + (g << 8) + b).toString(16).slice(1);
35
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  };
36
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  export const useColor = () => {
37
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  const settings = useSettings();
@@ -47,7 +47,7 @@ export const useColor = () => {
47
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  colorEncoding = settings.colorEncoding,
48
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  colorscale = null
49
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  } = _ref;
50
- const colormap = colorscale || COLORSCALES[categorical ? "Accent" : settings.controls.colorScale];
50
+ const colormap = colorscale || COLORSCALES[categorical ? 'Accent' : settings.controls.colorScale];
51
51
  if (colorEncoding) {
52
52
  if (grayOut) {
53
53
  // Mix color with gray manually instead of chroma.mix to get better performance with deck.gl
@@ -1,5 +1,5 @@
1
- import { WebMercatorViewport } from "@deck.gl/core";
2
- import _ from "lodash";
1
+ import { WebMercatorViewport } from '@deck.gl/core';
2
+ import _ from 'lodash';
3
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  export class MapHelper {
4
4
  fitBounds(coords) {
5
5
  let {
@@ -3,9 +3,9 @@ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t =
3
3
  function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
4
4
  function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
5
5
  function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
6
- import { useCallback } from "react";
7
- import { useQueries, useQuery } from "@tanstack/react-query";
8
- import { ArrayNotFoundError, GroupNotFoundError, openArray } from "zarr";
6
+ import { useCallback } from 'react';
7
+ import { useQueries, useQuery } from '@tanstack/react-query';
8
+ import { ArrayNotFoundError, GroupNotFoundError, openArray } from 'zarr';
9
9
  export const GET_OPTIONS = {
10
10
  concurrencyLimit: 10,
11
11
  // max number of concurrent requests (default 10)
@@ -22,7 +22,7 @@ export class ZarrHelper {
22
22
  const z = await openArray({
23
23
  store: url,
24
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  path: path,
25
- mode: "r"
25
+ mode: 'r'
26
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  });
27
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  return z;
28
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  }
@@ -53,7 +53,7 @@ export const useZarr = function (_ref2) {
53
53
  isLoading: isPending = false,
54
54
  error: serverError = null
55
55
  } = useQuery(_objectSpread({
56
- queryKey: ["zarr", url, path, s],
56
+ queryKey: ['zarr', url, path, s],
57
57
  queryFn: () => fetchDataFromZarr(url, path, s, options),
58
58
  retry: (failureCount, _ref3) => {
59
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  let {
@@ -94,7 +94,7 @@ export const useMultipleZarr = function (inputs) {
94
94
  serverError = null
95
95
  } = useQueries({
96
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  queries: inputs.map(input => _objectSpread({
97
- queryKey: ["zarr", input.url, input.path, input.s],
97
+ queryKey: ['zarr', input.url, input.path, input.s],
98
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  queryFn: () => fetchDataFromZarr(input.url, input.path, input.s, options),
99
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  retry: (failureCount, _ref4) => {
100
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  let {
package/dist/esm/index.js CHANGED
@@ -1,22 +1,22 @@
1
- export { Dotplot } from "./components/dotplot/Dotplot";
2
- export { DotplotControls } from "./components/dotplot/DotplotControls";
3
- export { FullPage } from "./components/full-page/FullPage";
4
- export { Heatmap } from "./components/heatmap/Heatmap";
5
- export { HeatmapControls } from "./components/heatmap/HeatmapControls";
6
- export { Matrixplot } from "./components/matrixplot/Matrixplot";
7
- export { MatrixplotControls } from "./components/matrixplot/MatrixplotControls";
8
- export { ObsColsList } from "./components/obs-list/ObsList";
9
- export { ObsmKeysList } from "./components/obsm-list/ObsmList";
10
- export { OffcanvasControls, OffcanvasObs, OffcanvasObsm, OffcanvasVars } from "./components/offcanvas";
11
- export { Pseudospatial } from "./components/pseudospatial/Pseudospatial";
12
- export { Scatterplot } from "./components/scatterplot/Scatterplot";
13
- export { ScatterplotControls } from "./components/scatterplot/ScatterplotControls";
14
- export { SearchBar } from "./components/search-bar/SearchBar";
15
- export { Toolbar } from "./components/toolbar/Toolbar";
16
- export { VarNamesList } from "./components/var-list/VarList";
17
- export { Violin } from "./components/violin/Violin";
18
- export { ViolinControls } from "./components/violin/ViolinControls";
19
- export { COLORSCALES } from "./constants/colorscales";
20
- export { PLOT_TYPES, SELECTION_MODES, VIOLIN_MODES } from "./constants/constants";
21
- export { DatasetProvider } from "./context/DatasetContext";
22
- export { FilterProvider } from "./context/FilterContext";
1
+ export { Dotplot } from './components/dotplot/Dotplot';
2
+ export { DotplotControls } from './components/dotplot/DotplotControls';
3
+ export { FullPage } from './components/full-page/FullPage';
4
+ export { Heatmap } from './components/heatmap/Heatmap';
5
+ export { HeatmapControls } from './components/heatmap/HeatmapControls';
6
+ export { Matrixplot } from './components/matrixplot/Matrixplot';
7
+ export { MatrixplotControls } from './components/matrixplot/MatrixplotControls';
8
+ export { ObsColsList } from './components/obs-list/ObsList';
9
+ export { ObsmKeysList } from './components/obsm-list/ObsmList';
10
+ export { OffcanvasControls, OffcanvasObs, OffcanvasObsm, OffcanvasVars } from './components/offcanvas';
11
+ export { Pseudospatial } from './components/pseudospatial/Pseudospatial';
12
+ export { Scatterplot } from './components/scatterplot/Scatterplot';
13
+ export { ScatterplotControls } from './components/scatterplot/ScatterplotControls';
14
+ export { SearchBar } from './components/search-bar/SearchBar';
15
+ export { Toolbar } from './components/toolbar/Toolbar';
16
+ export { VarNamesList } from './components/var-list/VarList';
17
+ export { Violin } from './components/violin/Violin';
18
+ export { ViolinControls } from './components/violin/ViolinControls';
19
+ export { COLORSCALES } from './constants/colorscales';
20
+ export { PLOT_TYPES, SELECTION_MODES, VIOLIN_MODES } from './constants/constants';
21
+ export { DatasetProvider } from './context/DatasetContext';
22
+ export { FilterProvider } from './context/FilterContext';
@@ -1,9 +1,10 @@
1
- import { useEffect, useCallback, useMemo } from "react";
2
- import { booleanPointInPolygon, point } from "@turf/turf";
3
- import _ from "lodash";
4
- import { COLOR_ENCODINGS, OBS_TYPES } from "../constants/constants";
5
- import { useFilteredDataDispatch } from "../context/FilterContext";
6
- import { useSettings } from "../context/SettingsContext";
1
+ import { useEffect, useCallback, useMemo } from 'react';
2
+ import { booleanPointInPolygon, point } from '@turf/turf';
3
+ import _ from 'lodash';
4
+ import { useSelectedObs } from './Resolver';
5
+ import { COLOR_ENCODINGS, OBS_TYPES } from '../constants/constants';
6
+ import { useFilteredDataDispatch } from '../context/FilterContext';
7
+ import { useSettings } from '../context/SettingsContext';
7
8
  const EPSILON = 1e-6;
8
9
  const isInBins = (v, binEdges, indices) => {
9
10
  const lastEdge = _.last(binEdges);
@@ -29,9 +30,14 @@ const isInValues = (omit, value) => {
29
30
  return !_.includes(omit, value);
30
31
  };
31
32
  export const useFilter = data => {
32
- var _settings$selectedObs, _settings$selectedObs2, _settings$selectedObs3, _settings$selectedObs4, _settings$selectedObs7, _settings$selectedObs8;
33
+ var _selectedObs$omit, _selectedObs$bins2;
33
34
  const settings = useSettings();
34
35
  const filterDataDispatch = useFilteredDataDispatch();
36
+ const selectedObs = useSelectedObs();
37
+ const omitCodes = _.map((selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.omit) || [], o => {
38
+ var _selectedObs$codes;
39
+ return selectedObs === null || selectedObs === void 0 || (_selectedObs$codes = selectedObs.codes) === null || _selectedObs$codes === void 0 ? void 0 : _selectedObs$codes[o];
40
+ });
35
41
  const {
36
42
  obsmData,
37
43
  xData,
@@ -39,26 +45,25 @@ export const useFilter = data => {
39
45
  isPending,
40
46
  serverError
41
47
  } = data;
42
- const isCategorical = ((_settings$selectedObs = settings.selectedObs) === null || _settings$selectedObs === void 0 ? void 0 : _settings$selectedObs.type) === OBS_TYPES.CATEGORICAL || ((_settings$selectedObs2 = settings.selectedObs) === null || _settings$selectedObs2 === void 0 ? void 0 : _settings$selectedObs2.type) === OBS_TYPES.BOOLEAN;
43
- const isContinuous = ((_settings$selectedObs3 = settings.selectedObs) === null || _settings$selectedObs3 === void 0 ? void 0 : _settings$selectedObs3.type) === OBS_TYPES.CONTINUOUS;
44
- const sliceByObs = settings.colorEncoding === COLOR_ENCODINGS.OBS && !!((_settings$selectedObs4 = settings.selectedObs) !== null && _settings$selectedObs4 !== void 0 && _settings$selectedObs4.omit.length) || settings.sliceBy.obs;
48
+ const isCategorical = (selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.type) === OBS_TYPES.CATEGORICAL || (selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.type) === OBS_TYPES.BOOLEAN;
49
+ const isContinuous = (selectedObs === null || selectedObs === void 0 ? void 0 : selectedObs.type) === OBS_TYPES.CONTINUOUS;
50
+ const sliceByObs = settings.colorEncoding === COLOR_ENCODINGS.OBS && !!(selectedObs !== null && selectedObs !== void 0 && (_selectedObs$omit = selectedObs.omit) !== null && _selectedObs$omit !== void 0 && _selectedObs$omit.length) || settings.sliceBy.obs;
45
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  const isInObsSlice = useCallback((index, values) => {
46
52
  let inSlice = true;
47
53
  if (values && sliceByObs) {
48
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  if (isCategorical) {
49
- var _settings$selectedObs5;
50
- inSlice &= isInValues((_settings$selectedObs5 = settings.selectedObs) === null || _settings$selectedObs5 === void 0 ? void 0 : _settings$selectedObs5.omit, values[index]);
55
+ inSlice &= isInValues(omitCodes, values[index]);
51
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  } else if (isContinuous) {
52
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  if (isNaN(values[index])) {
53
- var _settings$selectedObs6;
54
- inSlice &= isInValues((_settings$selectedObs6 = settings.selectedObs) === null || _settings$selectedObs6 === void 0 ? void 0 : _settings$selectedObs6.omit, -1);
58
+ inSlice &= isInValues(omitCodes, -1);
55
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  } else {
56
- inSlice &= isInBins(values[index], settings.selectedObs.bins.binEdges, _.without(settings.selectedObs.omit, -1));
60
+ var _selectedObs$bins;
61
+ inSlice &= isInBins(values[index], selectedObs === null || selectedObs === void 0 || (_selectedObs$bins = selectedObs.bins) === null || _selectedObs$bins === void 0 ? void 0 : _selectedObs$bins.binEdges, _.without(omitCodes, -1));
57
62
  }
58
63
  }
59
64
  }
60
65
  return inSlice;
61
- }, [(_settings$selectedObs7 = settings.selectedObs) === null || _settings$selectedObs7 === void 0 || (_settings$selectedObs7 = _settings$selectedObs7.bins) === null || _settings$selectedObs7 === void 0 ? void 0 : _settings$selectedObs7.binEdges, (_settings$selectedObs8 = settings.selectedObs) === null || _settings$selectedObs8 === void 0 ? void 0 : _settings$selectedObs8.omit, isCategorical, isContinuous, sliceByObs]);
66
+ }, [sliceByObs, isCategorical, isContinuous, omitCodes, selectedObs === null || selectedObs === void 0 || (_selectedObs$bins2 = selectedObs.bins) === null || _selectedObs$bins2 === void 0 ? void 0 : _selectedObs$bins2.binEdges]);
62
67
  const isInPolygonsSlice = useCallback((index, positions) => {
63
68
  let inSlice = true;
64
69
  if (settings.sliceBy.polygons && positions) {
@@ -139,7 +144,7 @@ export const useFilter = data => {
139
144
  useEffect(() => {
140
145
  if (!isPending && !serverError) {
141
146
  filterDataDispatch({
142
- type: "set.obs.indices",
147
+ type: 'set.obs.indices',
143
148
  indices: isSliced ? filteredIndices : null,
144
149
  valueMin: valueMin,
145
150
  valueMax: valueMax,
@@ -1,8 +1,8 @@
1
- import React from "react";
2
- import { SparkLineChart, mangoFusionPalette, blueberryTwilightPalette } from "@mui/x-charts";
3
- import _ from "lodash";
4
- import { LoadingLinear } from "./LoadingIndicators";
5
- import { formatNumerical, FORMATS } from "./string";
1
+ import { SparkLineChart, mangoFusionPalette, blueberryTwilightPalette } from '@mui/x-charts';
2
+ import _ from 'lodash';
3
+ import { LoadingLinear } from './LoadingIndicators';
4
+ import { formatNumerical, FORMATS } from './string';
5
+ import { jsx as _jsx } from "react/jsx-runtime";
6
6
  export function Histogram(_ref) {
7
7
  var _data$bin_edges;
8
8
  let {
@@ -10,36 +10,38 @@ export function Histogram(_ref) {
10
10
  isPending,
11
11
  altColor = false
12
12
  } = _ref;
13
- return /*#__PURE__*/React.createElement("div", {
14
- className: "feature-histogram-container"
15
- }, isPending ? /*#__PURE__*/React.createElement(LoadingLinear, null) : data ? /*#__PURE__*/React.createElement("div", {
16
- className: "feature-histogram m-1"
17
- }, /*#__PURE__*/React.createElement(SparkLineChart, {
18
- plotType: "bar",
19
- data: data.log10,
20
- margin: {
21
- top: 0,
22
- right: 0,
23
- bottom: 0,
24
- left: 0
25
- },
26
- colors: altColor ? mangoFusionPalette : blueberryTwilightPalette,
27
- showHighlight: true,
28
- showTooltip: true,
29
- valueFormatter: (v, _ref2) => {
30
- let {
31
- dataIndex
32
- } = _ref2;
33
- return "".concat(formatNumerical(data.hist[dataIndex]));
34
- },
35
- xAxis: {
36
- data: _.range((_data$bin_edges = data.bin_edges) === null || _data$bin_edges === void 0 ? void 0 : _data$bin_edges.length) || null,
37
- valueFormatter: v => "Bin [".concat(formatNumerical(data.bin_edges[v][0], FORMATS.EXPONENTIAL), ", ").concat(formatNumerical(data.bin_edges[v][1], FORMATS.EXPONENTIAL)).concat(v === data.bin_edges.length - 1 ? "]" : ")")
38
- },
39
- slotProps: {
40
- popper: {
41
- className: "feature-histogram-tooltip"
42
- }
43
- }
44
- })) : null);
13
+ return /*#__PURE__*/_jsx("div", {
14
+ className: "feature-histogram-container",
15
+ children: isPending ? /*#__PURE__*/_jsx(LoadingLinear, {}) : data ? /*#__PURE__*/_jsx("div", {
16
+ className: "feature-histogram m-1",
17
+ children: /*#__PURE__*/_jsx(SparkLineChart, {
18
+ plotType: "bar",
19
+ data: data.log10,
20
+ margin: {
21
+ top: 0,
22
+ right: 0,
23
+ bottom: 0,
24
+ left: 0
25
+ },
26
+ colors: altColor ? mangoFusionPalette : blueberryTwilightPalette,
27
+ showHighlight: true,
28
+ showTooltip: true,
29
+ valueFormatter: (v, _ref2) => {
30
+ let {
31
+ dataIndex
32
+ } = _ref2;
33
+ return "".concat(formatNumerical(data.hist[dataIndex]));
34
+ },
35
+ xAxis: {
36
+ data: _.range((_data$bin_edges = data.bin_edges) === null || _data$bin_edges === void 0 ? void 0 : _data$bin_edges.length) || null,
37
+ valueFormatter: v => "Bin [".concat(formatNumerical(data.bin_edges[v][0], FORMATS.EXPONENTIAL), ", ").concat(formatNumerical(data.bin_edges[v][1], FORMATS.EXPONENTIAL)).concat(v === data.bin_edges.length - 1 ? ']' : ')')
38
+ },
39
+ slotProps: {
40
+ popper: {
41
+ className: 'feature-histogram-tooltip'
42
+ }
43
+ }
44
+ })
45
+ }) : null
46
+ });
45
47
  }
@@ -1,18 +1,19 @@
1
- import React, { useState } from "react";
2
- import { Alert } from "react-bootstrap";
1
+ import { useState } from 'react';
2
+ import { Alert } from 'react-bootstrap';
3
+ import { jsx as _jsx, Fragment as _Fragment } from "react/jsx-runtime";
3
4
  export const ImageViewer = _ref => {
4
5
  let {
5
6
  src,
6
7
  alt,
7
- className = "img-fluid"
8
+ className = 'img-fluid'
8
9
  } = _ref;
9
10
  const [error, setError] = useState(false);
10
11
  const handleError = () => {
11
- console.error("Error loading image from src:", src);
12
+ console.error('Error loading image from src:', src);
12
13
  setError(true);
13
14
  };
14
15
  if (!error) {
15
- return /*#__PURE__*/React.createElement("img", {
16
+ return /*#__PURE__*/_jsx("img", {
16
17
  src: src,
17
18
  alt: alt,
18
19
  className: className,
@@ -20,8 +21,11 @@ export const ImageViewer = _ref => {
20
21
  onError: handleError
21
22
  });
22
23
  } else {
23
- return /*#__PURE__*/React.createElement(React.Fragment, null, /*#__PURE__*/React.createElement(Alert, {
24
- variant: "danger"
25
- }, "Failed to load image"));
24
+ return /*#__PURE__*/_jsx(_Fragment, {
25
+ children: /*#__PURE__*/_jsx(Alert, {
26
+ variant: "danger",
27
+ children: "Failed to load image"
28
+ })
29
+ });
26
30
  }
27
31
  };
@@ -1,18 +1,19 @@
1
- import React, { useMemo } from "react";
2
- import { faDroplet } from "@fortawesome/free-solid-svg-icons";
3
- import { FontAwesomeIcon } from "@fortawesome/react-fontawesome";
4
- import _ from "lodash";
5
- import { formatNumerical, FORMATS } from "./string";
6
- import { COLOR_ENCODINGS } from "../constants/constants";
7
- import { useSettings } from "../context/SettingsContext";
8
- import { rgbToHex, useColor } from "../helpers/color-helper";
1
+ import { useMemo } from 'react';
2
+ import { faDroplet } from '@fortawesome/free-solid-svg-icons';
3
+ import { FontAwesomeIcon } from '@fortawesome/react-fontawesome';
4
+ import _ from 'lodash';
5
+ import { formatNumerical, FORMATS } from './string';
6
+ import { COLOR_ENCODINGS } from '../constants/constants';
7
+ import { useSettings } from '../context/SettingsContext';
8
+ import { rgbToHex, useColor } from '../helpers/color-helper';
9
+ import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
9
10
  export function Legend(_ref) {
10
11
  let {
11
12
  isCategorical = false,
12
13
  min = 0,
13
14
  max = 1,
14
15
  colorscale = null,
15
- addText = ""
16
+ addText = ''
16
17
  } = _ref;
17
18
  const settings = useSettings();
18
19
  const {
@@ -25,41 +26,48 @@ export function Legend(_ref) {
25
26
  categorical: isCategorical,
26
27
  colorscale: colorscale
27
28
  }));
28
- return /*#__PURE__*/React.createElement("span", {
29
- key: i,
29
+ return /*#__PURE__*/_jsx("span", {
30
30
  className: "grad-step",
31
31
  style: {
32
32
  backgroundColor: color
33
33
  }
34
- });
34
+ }, i);
35
35
  });
36
36
  }, [colorscale, getColor, isCategorical]);
37
37
  if (settings.colorEncoding && !isCategorical) {
38
38
  var _settings$selectedVar, _settings$selectedObs;
39
- return /*#__PURE__*/React.createElement("div", {
40
- className: "cherita-legend"
41
- }, /*#__PURE__*/React.createElement("div", {
42
- className: "gradient"
43
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44
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45
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46
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47
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48
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49
- className: "domain-min"
50
- }, formatNumerical(min, FORMATS.EXPONENTIAL)), /*#__PURE__*/React.createElement("span", {
51
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52
- }, formatNumerical((min + max) * 0.5, FORMATS.EXPONENTIAL)), /*#__PURE__*/React.createElement("span", {
53
- className: "domain-max"
54
- }, formatNumerical(max, FORMATS.EXPONENTIAL))));
39
+ return /*#__PURE__*/_jsx("div", {
40
+ className: "cherita-legend",
41
+ children: /*#__PURE__*/_jsxs("div", {
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+ className: "gradient",
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+ children: [/*#__PURE__*/_jsxs("p", {
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+ className: "small m-0 p-0",
45
+ children: [/*#__PURE__*/_jsx(FontAwesomeIcon, {
46
+ icon: faDroplet,
47
+ className: "me-1"
48
+ }), (settings.colorEncoding === COLOR_ENCODINGS.VAR ? (_settings$selectedVar = settings.selectedVar) === null || _settings$selectedVar === void 0 ? void 0 : _settings$selectedVar.name : (_settings$selectedObs = settings.selectedObs) === null || _settings$selectedObs === void 0 ? void 0 : _settings$selectedObs.name) + addText]
49
+ }), spanList, /*#__PURE__*/_jsx("span", {
50
+ className: "domain-min",
51
+ children: formatNumerical(min, FORMATS.EXPONENTIAL)
52
+ }), /*#__PURE__*/_jsx("span", {
53
+ className: "domain-med",
54
+ children: formatNumerical((min + max) * 0.5, FORMATS.EXPONENTIAL)
55
+ }), /*#__PURE__*/_jsx("span", {
56
+ className: "domain-max",
57
+ children: formatNumerical(max, FORMATS.EXPONENTIAL)
58
+ })]
59
+ })
60
+ });
55
61
  } else if (settings.colorEncoding === COLOR_ENCODINGS.OBS && settings.selectedObs) {
56
- return /*#__PURE__*/React.createElement("div", {
57
- className: "cherita-legend categorical"
58
- }, /*#__PURE__*/React.createElement("p", {
59
- className: "legend-text text-end m-0 p-0"
60
- }, /*#__PURE__*/React.createElement(FontAwesomeIcon, {
61
- icon: faDroplet,
62
- className: "me-2"
63
- }), settings.selectedObs.name));
62
+ return /*#__PURE__*/_jsx("div", {
63
+ className: "cherita-legend categorical",
64
+ children: /*#__PURE__*/_jsxs("p", {
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+ className: "legend-text text-end m-0 p-0",
66
+ children: [/*#__PURE__*/_jsx(FontAwesomeIcon, {
67
+ icon: faDroplet,
68
+ className: "me-2"
69
+ }), settings.selectedObs.name]
70
+ })
71
+ });
64
72
  }
65
73
  }
@@ -1,22 +1,25 @@
1
- import React from 'react';
2
- import { Box, CircularProgress, LinearProgress } from "@mui/material";
1
+ import { Box, CircularProgress, LinearProgress } from '@mui/material';
2
+ import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
3
3
  export const LoadingSpinner = _ref => {
4
4
  let {
5
5
  text = null,
6
6
  disableShrink = false
7
7
  } = _ref;
8
- return /*#__PURE__*/React.createElement("div", {
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10
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- className: "visually-hidden"
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- }, text));
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+ return /*#__PURE__*/_jsxs("div", {
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+ className: "loading-spinner",
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+ children: [/*#__PURE__*/_jsx(CircularProgress, {
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13
+ className: "visually-hidden",
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+ children: text
15
+ })]
16
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15
17
  };
16
18
  export const LoadingLinear = () => {
17
- return /*#__PURE__*/React.createElement(Box, {
19
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18
20
  sx: {
19
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21
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+ width: '100%'
22
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23
+ children: /*#__PURE__*/_jsx(LinearProgress, {})
24
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25
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