@haniffalab/cherita-react 1.4.1-dev.2025-10-23.e95b5a90 → 1.4.1-dev.2025-10-23.55fbe6ff
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +1 -1
- package/dist/cjs/components/controls/Controls.js +4 -4
- package/dist/cjs/components/dotplot/Dotplot.js +8 -8
- package/dist/cjs/components/dotplot/DotplotControls.js +5 -5
- package/dist/cjs/components/full-page/FullPage.js +1 -2
- package/dist/cjs/components/full-page/PlotAlert.js +1 -1
- package/dist/cjs/components/full-page/PlotTypeSelector.js +13 -13
- package/dist/cjs/components/heatmap/Heatmap.js +7 -7
- package/dist/cjs/components/icons/DotPlotIcon.js +1 -1
- package/dist/cjs/components/icons/HeatmapIcon.js +1 -1
- package/dist/cjs/components/icons/MatrixPlotIcon.1.js +1 -1
- package/dist/cjs/components/icons/MatrixPlotIcon.js +1 -1
- package/dist/cjs/components/icons/ScatterplotIcon.1.js +1 -1
- package/dist/cjs/components/icons/ScatterplotIcon.js +1 -1
- package/dist/cjs/components/icons/ViolinPlotIcon.js +1 -1
- package/dist/cjs/components/matrixplot/Matrixplot.js +7 -7
- package/dist/cjs/components/obs-list/ObsItem.js +19 -19
- package/dist/cjs/components/obs-list/ObsList.js +17 -17
- package/dist/cjs/components/obsm-list/ObsmList.js +7 -7
- package/dist/cjs/components/pseudospatial/Pseudospatial.js +16 -16
- package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +10 -10
- package/dist/cjs/components/scatterplot/Scatterplot.js +16 -16
- package/dist/cjs/components/scatterplot/ScatterplotControls.js +1 -1
- package/dist/cjs/components/scatterplot/SpatialControls.js +9 -9
- package/dist/cjs/components/scatterplot/Toolbox.js +4 -4
- package/dist/cjs/components/search-bar/SearchBar.js +14 -14
- package/dist/cjs/components/search-bar/SearchInfo.js +3 -3
- package/dist/cjs/components/search-bar/SearchResults.js +2 -2
- package/dist/cjs/components/toolbar/Toolbar.js +3 -3
- package/dist/cjs/components/var-list/VarItem.js +15 -15
- package/dist/cjs/components/var-list/VarList.js +5 -5
- package/dist/cjs/components/var-list/VarListToolbar.js +4 -4
- package/dist/cjs/components/var-list/VarSet.js +13 -13
- package/dist/cjs/components/violin/Violin.js +10 -10
- package/dist/cjs/constants/colorscales.js +19 -19
- package/dist/cjs/constants/constants.js +47 -47
- package/dist/cjs/context/DatasetContext.js +3 -3
- package/dist/cjs/context/FilterContext.js +2 -2
- package/dist/cjs/context/SettingsContext.js +57 -57
- package/dist/cjs/helpers/color-helper.js +2 -2
- package/dist/cjs/helpers/zarr-helper.js +3 -3
- package/dist/cjs/utils/Filter.js +1 -1
- package/dist/cjs/utils/Histogram.js +2 -2
- package/dist/cjs/utils/ImageViewer.js +2 -2
- package/dist/cjs/utils/Legend.js +1 -1
- package/dist/cjs/utils/LoadingIndicators.js +1 -1
- package/dist/cjs/utils/Resolver.js +7 -7
- package/dist/cjs/utils/Skeleton.js +1 -1
- package/dist/cjs/utils/StyledTooltip.js +5 -5
- package/dist/cjs/utils/VirtualizedList.js +7 -7
- package/dist/cjs/utils/errors.js +15 -15
- package/dist/cjs/utils/requests.js +5 -5
- package/dist/cjs/utils/search.js +4 -4
- package/dist/cjs/utils/string.js +6 -6
- package/dist/cjs/utils/zarrData.js +5 -5
- package/dist/css/cherita.css +21 -20
- package/dist/css/cherita.css.map +1 -1
- package/dist/esm/components/controls/Controls.js +9 -9
- package/dist/esm/components/dotplot/Dotplot.js +21 -21
- package/dist/esm/components/dotplot/DotplotControls.js +9 -9
- package/dist/esm/components/full-page/FullPage.js +22 -23
- package/dist/esm/components/full-page/PlotAlert.js +5 -5
- package/dist/esm/components/full-page/PlotTypeSelector.js +21 -21
- package/dist/esm/components/heatmap/Heatmap.js +20 -20
- package/dist/esm/components/heatmap/HeatmapControls.js +2 -2
- package/dist/esm/components/icons/DotPlotIcon.js +1 -1
- package/dist/esm/components/icons/HeatmapIcon.js +1 -1
- package/dist/esm/components/icons/MatrixPlotIcon.1.js +1 -1
- package/dist/esm/components/icons/MatrixPlotIcon.js +1 -1
- package/dist/esm/components/icons/ScatterplotIcon.1.js +1 -1
- package/dist/esm/components/icons/ScatterplotIcon.js +1 -1
- package/dist/esm/components/icons/ViolinPlotIcon.js +1 -1
- package/dist/esm/components/matrixplot/Matrixplot.js +20 -20
- package/dist/esm/components/matrixplot/MatrixplotControls.js +2 -2
- package/dist/esm/components/obs-list/ObsItem.js +37 -37
- package/dist/esm/components/obs-list/ObsList.js +34 -34
- package/dist/esm/components/obs-list/ObsToolbar.js +1 -1
- package/dist/esm/components/obsm-list/ObsmList.js +15 -15
- package/dist/esm/components/offcanvas/index.js +6 -6
- package/dist/esm/components/pseudospatial/Pseudospatial.js +31 -31
- package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +17 -17
- package/dist/esm/components/scatterplot/Scatterplot.js +38 -38
- package/dist/esm/components/scatterplot/ScatterplotControls.js +9 -9
- package/dist/esm/components/scatterplot/SpatialControls.js +23 -23
- package/dist/esm/components/scatterplot/Toolbox.js +7 -7
- package/dist/esm/components/search-bar/SearchBar.js +27 -27
- package/dist/esm/components/search-bar/SearchInfo.js +14 -14
- package/dist/esm/components/search-bar/SearchResults.js +10 -10
- package/dist/esm/components/toolbar/Toolbar.js +6 -6
- package/dist/esm/components/var-list/VarItem.js +27 -27
- package/dist/esm/components/var-list/VarList.js +21 -21
- package/dist/esm/components/var-list/VarListToolbar.js +10 -10
- package/dist/esm/components/var-list/VarSet.js +22 -22
- package/dist/esm/components/violin/Violin.js +26 -26
- package/dist/esm/components/violin/ViolinControls.js +2 -2
- package/dist/esm/constants/colorscales.js +19 -19
- package/dist/esm/constants/constants.js +47 -47
- package/dist/esm/context/DatasetContext.js +11 -11
- package/dist/esm/context/FilterContext.js +3 -3
- package/dist/esm/context/SettingsContext.js +61 -61
- package/dist/esm/context/ZarrDataContext.js +3 -3
- package/dist/esm/helpers/color-helper.js +5 -5
- package/dist/esm/helpers/map-helper.js +2 -2
- package/dist/esm/helpers/zarr-helper.js +6 -6
- package/dist/esm/index.js +22 -22
- package/dist/esm/utils/Filter.js +8 -8
- package/dist/esm/utils/Histogram.js +6 -6
- package/dist/esm/utils/ImageViewer.js +4 -4
- package/dist/esm/utils/Legend.js +9 -9
- package/dist/esm/utils/LoadingIndicators.js +2 -2
- package/dist/esm/utils/Resolver.js +13 -13
- package/dist/esm/utils/Skeleton.js +2 -2
- package/dist/esm/utils/StyledTooltip.js +6 -6
- package/dist/esm/utils/VirtualizedList.js +9 -9
- package/dist/esm/utils/errors.js +15 -15
- package/dist/esm/utils/requests.js +8 -8
- package/dist/esm/utils/search.js +7 -7
- package/dist/esm/utils/string.js +7 -7
- package/dist/esm/utils/zarrData.js +13 -13
- package/package.json +11 -7
- package/scss/cherita-bootstrap.scss +2 -2
- package/scss/cherita.scss +24 -17
- package/scss/components/accordions.scss +4 -1
- package/scss/components/layouts.scss +13 -12
- package/scss/components/lists.scss +8 -4
- package/scss/components/plotly.scss +1 -0
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function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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const select = (dispatch, item) => {
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dispatch({
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const FEATURE_TYPE = {
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VAR:
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DISEASE:
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VAR: 'var',
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DISEASE: 'disease'
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function SearchModal(_ref2) {
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const [tab, setTab] = (0, _react.useState)(
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const [tab, setTab] = (0, _react.useState)('var');
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const [selectedResult, setSelectedResult] = (0, _react.useState)({
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const [text, setText] = (0, _react.useState)('');
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const displayText = [...(searchVar ? ['features'] : []), ...(searchDiseases ? ['diseases'] : [])].join(' and ');
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const [showModal, setShowModal] = (0, _react.useState)(false);
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}) : 'category', ' ', "to group observations, and choose a", ' ', showVarsBtn ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
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variant: "link",
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}) :
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}) : 'feature', ' ', "to view its distribution within each group."]
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})]
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} else {
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heading: "Error displaying the violin plot",
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plotType: plotType,
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children: serverError.message ||
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children: serverError.message || 'An unexpected error occurred while generating the plot.'
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});
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}
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}
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@@ -6,23 +6,23 @@ Object.defineProperty(exports, "__esModule", {
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exports.COLORSCALES = void 0;
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7
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// From plotly https://github.com/plotly/plotly.js/blob/5bc25b490702e5ed61265207833dbd58e8ab27f1/src/components/colorscale/scales.js
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const COLORSCALES = exports.COLORSCALES = {
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Greys: [
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YlGnBu: [
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Greens: [
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YlOrRd: [
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Bluered: [
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RdBu: [
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Reds: [
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Blues: [
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Picnic: [
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Rainbow: [
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Portland: [
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Jet: [
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Hot: [
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Blackbody: [
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Earth: [
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Electric: [
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Viridis: [
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Cividis: [
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Accent: [
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+
Greys: ['#000000', '#ffffff'],
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+
YlGnBu: ['#081d58', '#253494', '#225ea8', '#1d91c0', '#41b6c4', '#7fcdbb', '#c7e9b4', '#edf8d9', '#ffffd9'],
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11
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+
Greens: ['#00441b', '#006d2c', '#238b45', '#41ab5d', '#74c476', '#a1d9a5', '#c7e9c0', '#e5f5e0', '#f7fcf5'],
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12
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+
YlOrRd: ['#800026', '#bd0026', '#e31a1c', '#fc4e2a', '#fd8d3c', '#feb24c', '#fed976', '#ffed9f', '#ffffcc'],
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+
Bluered: ['#0000ff', '#ff0000'],
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+
RdBu: ['#050aac', '#6a89f7', '#bebebe', '#dcaa84', '#e6915a', '#b20a1c'],
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+
Reds: ['#dcdcdc', '#f5c39d', '#f5a069', '#b20a1c'],
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Blues: ['#050aac', '#283cba', '#4664f5', '#5a78f5', '#6a89f7', '#dcdcdc'],
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Picnic: ['#0000ff', '#3399ff', '#66ccff', '#99ccff', '#ccccff', '#ffffff', '#ffccff', '#ff99ff', '#ff66cc', '#ff6666', '#ff0000'],
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+
Rainbow: ['#96005a', '#0000c8', '#0019ff', '#0098ff', '#2cff96', '#97ff00', '#ffe600', '#ff6f00', '#ff0000'],
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+
Portland: ['#0c3383', '#0a88ba', '#f2d338', '#f28f38', '#d91e1e'],
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+
Jet: ['#000083', '#003caa', '#05ffff', '#ffff00', '#fa0000', '#800000'],
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+
Hot: ['#000000', '#e60000', '#ffd200', '#ffffff'],
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+
Blackbody: ['#000000', '#e60000', '#e6d200', '#ffffff', '#a0c8ff'],
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+
Earth: ['#000082', '#00b4b4', '#28d228', '#e6e632', '#784614', '#ffffff'],
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+
Electric: ['#000000', '#1e0064', '#780064', '#a05a00', '#e6c800', '#fffadc'],
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25
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+
Viridis: ['#440154', '#48186a', '#472d7b', '#424086', '#3b528b', '#33638d', '#2c728e', '#26828e', '#21918c', '#1fa088', '#28ae80', '#3fbc73', '#5ec962', '#84d44b', '#addc30', '#d8e219', '#fde725'],
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26
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+
Cividis: ['#00204c', '#002a66', '#00346e', '#273f6c', '#3c4a6c', '#4c556b', '#5b5f6d', '#686a70', '#757575', '#838178', '#929c78', '#a19676', '#b0a572', '#c0af6d', '#d1ba65', '#e1c75c', '#f3db4f', '#ffe945'],
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+
Accent: ['#7fc97f', '#beaed4', '#fdc086', '#ffff99', '#386cb0', '#f0027f', '#bf5b17', '#666666']
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};
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