@haniffalab/cherita-react 1.4.0-dev.2025-06-20.988afab5 → 1.4.0-dev.2025-06-20.3942a626

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Files changed (9) hide show
  1. package/dist/cjs/components/search-bar/SearchBar.js +40 -32
  2. package/dist/cjs/components/var-list/VarItem.js +19 -21
  3. package/dist/cjs/context/DatasetContext.js +1 -1
  4. package/dist/cjs/context/SettingsContext.js +2 -2
  5. package/dist/esm/components/search-bar/SearchBar.js +12 -3
  6. package/dist/esm/components/var-list/VarItem.js +19 -21
  7. package/dist/esm/context/DatasetContext.js +1 -1
  8. package/dist/esm/context/SettingsContext.js +2 -2
  9. package/package.json +2 -2
package/dist/cjs/components/search-bar/SearchBar.js CHANGED
@@ -5,26 +5,26 @@ Object.defineProperty(exports, "__esModule", {
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  });
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  exports.SearchBar = SearchBar;
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  exports.SearchModal = SearchModal;
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- var _react = _interopRequireWildcard(require("react"));
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+ var _react = require("react");
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  var _Close = _interopRequireDefault(require("@mui/icons-material/Close"));
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  var _Search = _interopRequireDefault(require("@mui/icons-material/Search"));
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+ var _lodash = _interopRequireDefault(require("lodash"));
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  var _reactBootstrap = require("react-bootstrap");
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  var _Col = _interopRequireDefault(require("react-bootstrap/Col"));
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  var _Container = _interopRequireDefault(require("react-bootstrap/Container"));
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  var _Nav = _interopRequireDefault(require("react-bootstrap/Nav"));
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  var _Row = _interopRequireDefault(require("react-bootstrap/Row"));
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  var _Tab = _interopRequireDefault(require("react-bootstrap/Tab"));
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+ var _constants = require("../../constants/constants");
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  var _SearchInfo = require("./SearchInfo");
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  var _SearchResults = require("./SearchResults");
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- var _constants = require("../../constants/constants");
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  function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
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- function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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  function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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  function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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  function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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  function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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  function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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- function onVarSelect(dispatch, item) {
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+ const select = (dispatch, item) => {
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  dispatch({
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  type: "select.var",
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  var: item
@@ -37,6 +37,14 @@ function onVarSelect(dispatch, item) {
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  type: "set.colorEncoding",
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  value: _constants.COLOR_ENCODINGS.VAR
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  });
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+ };
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+ const debounceSelect = _lodash.default.debounce(select, 2000);
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+ function onVarSelect(dispatch, item) {
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+ dispatch({
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+ type: "add.var",
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+ var: item
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+ });
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+ debounceSelect(dispatch, item);
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  }
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  function addVarSet(dispatch, _ref) {
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  let {
@@ -74,23 +82,23 @@ function SearchModal(_ref2) {
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  });
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  const [varResultsLength, setVarResultsLength] = (0, _react.useState)(null);
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  const [diseaseResultsLength, setDiseaseResultsLength] = (0, _react.useState)(null);
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- return /*#__PURE__*/_react.default.createElement(_reactBootstrap.Modal, {
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+ return /*#__PURE__*/React.createElement(_reactBootstrap.Modal, {
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  show: show,
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  onHide: handleClose,
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  size: "xl"
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Modal.Header, {
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+ }, /*#__PURE__*/React.createElement(_reactBootstrap.Modal.Header, {
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  className: "bg-primary"
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- }, /*#__PURE__*/_react.default.createElement(_Container.default, {
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+ }, /*#__PURE__*/React.createElement(_Container.default, {
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  className: "gx-0"
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- }, /*#__PURE__*/_react.default.createElement(_Row.default, null, /*#__PURE__*/_react.default.createElement(_Col.default, {
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+ }, /*#__PURE__*/React.createElement(_Row.default, null, /*#__PURE__*/React.createElement(_Col.default, {
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  xs: 12
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form, {
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+ }, /*#__PURE__*/React.createElement(_reactBootstrap.Form, {
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  onSubmit: e => {
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  e.preventDefault();
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  }
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.FormGroup, null, /*#__PURE__*/_react.default.createElement("div", {
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+ }, /*#__PURE__*/React.createElement(_reactBootstrap.FormGroup, null, /*#__PURE__*/React.createElement("div", {
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  className: "d-flex align-items-center"
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.InputGroup, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.InputGroup.Text, null, /*#__PURE__*/_react.default.createElement(_Search.default, null)), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form.Control, {
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+ }, /*#__PURE__*/React.createElement(_reactBootstrap.InputGroup, null, /*#__PURE__*/React.createElement(_reactBootstrap.InputGroup.Text, null, /*#__PURE__*/React.createElement(_Search.default, null)), /*#__PURE__*/React.createElement(_reactBootstrap.Form.Control, {
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  autoFocus: true,
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  type: "text",
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  placeholder: "Search " + displayText,
@@ -104,35 +112,35 @@ function SearchModal(_ref2) {
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  setVarResultsLength(null);
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  setDiseaseResultsLength(null);
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  }
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- }), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Button, {
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+ }), /*#__PURE__*/React.createElement(_reactBootstrap.Button, {
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  variant: "light",
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  onClick: handleClose
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- }, /*#__PURE__*/_react.default.createElement(_Close.default, null)))))))))), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Modal.Body, {
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+ }, /*#__PURE__*/React.createElement(_Close.default, null)))))))))), /*#__PURE__*/React.createElement(_reactBootstrap.Modal.Body, {
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  className: "p-0"
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- }, /*#__PURE__*/_react.default.createElement(_Container.default, null, /*#__PURE__*/_react.default.createElement(_Row.default, null, /*#__PURE__*/_react.default.createElement(_Col.default, {
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+ }, /*#__PURE__*/React.createElement(_Container.default, null, /*#__PURE__*/React.createElement(_Row.default, null, /*#__PURE__*/React.createElement(_Col.default, {
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  xs: 12,
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  md: 8
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- }, /*#__PURE__*/_react.default.createElement(_Tab.default.Container, {
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+ }, /*#__PURE__*/React.createElement(_Tab.default.Container, {
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  activeKey: tab,
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  onSelect: k => setTab(k)
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- }, /*#__PURE__*/_react.default.createElement(_Row.default, {
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+ }, /*#__PURE__*/React.createElement(_Row.default, {
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  className: "w-100"
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- }, /*#__PURE__*/_react.default.createElement(_Col.default, {
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+ }, /*#__PURE__*/React.createElement(_Col.default, {
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  sm: 3,
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  className: "py-3 border-end"
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- }, /*#__PURE__*/_react.default.createElement(_Nav.default, {
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+ }, /*#__PURE__*/React.createElement(_Nav.default, {
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  variant: "pills",
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  className: "flex-column"
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- }, searchVar && /*#__PURE__*/_react.default.createElement(_Nav.default.Item, null, /*#__PURE__*/_react.default.createElement(_Nav.default.Link, {
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+ }, searchVar && /*#__PURE__*/React.createElement(_Nav.default.Item, null, /*#__PURE__*/React.createElement(_Nav.default.Link, {
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  eventKey: FEATURE_TYPE.VAR
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- }, "Genes", " ", !!varResultsLength && "(".concat(varResultsLength, ")"))), searchDiseases && /*#__PURE__*/_react.default.createElement(_Nav.default.Item, null, /*#__PURE__*/_react.default.createElement(_Nav.default.Link, {
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+ }, "Genes", " ", !!varResultsLength && "(".concat(varResultsLength, ")"))), searchDiseases && /*#__PURE__*/React.createElement(_Nav.default.Item, null, /*#__PURE__*/React.createElement(_Nav.default.Link, {
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  eventKey: FEATURE_TYPE.DISEASE
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- }, "Diseases", " ", !!diseaseResultsLength && "(".concat(diseaseResultsLength, ")"))))), /*#__PURE__*/_react.default.createElement(_Col.default, {
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+ }, "Diseases", " ", !!diseaseResultsLength && "(".concat(diseaseResultsLength, ")"))))), /*#__PURE__*/React.createElement(_Col.default, {
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  sm: 9,
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  className: "py-3"
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- }, /*#__PURE__*/_react.default.createElement(_Tab.default.Content, null, searchVar && /*#__PURE__*/_react.default.createElement(_Tab.default.Pane, {
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+ }, /*#__PURE__*/React.createElement(_Tab.default.Content, null, searchVar && /*#__PURE__*/React.createElement(_Tab.default.Pane, {
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  eventKey: FEATURE_TYPE.VAR
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- }, /*#__PURE__*/_react.default.createElement(_SearchResults.VarSearchResults, {
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+ }, /*#__PURE__*/React.createElement(_SearchResults.VarSearchResults, {
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  text: text,
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  handleSelect: handleSelect,
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  selectedResult: selectedResult.var,
@@ -142,9 +150,9 @@ function SearchModal(_ref2) {
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  });
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  }),
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  setResultsLength: setVarResultsLength
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- })), searchDiseases && /*#__PURE__*/_react.default.createElement(_Tab.default.Pane, {
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+ })), searchDiseases && /*#__PURE__*/React.createElement(_Tab.default.Pane, {
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  eventKey: FEATURE_TYPE.DISEASE
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- }, /*#__PURE__*/_react.default.createElement(_SearchResults.DiseasesSearchResults, {
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+ }, /*#__PURE__*/React.createElement(_SearchResults.DiseasesSearchResults, {
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  text: text,
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  selectedResult: selectedResult.disease,
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  setSelectedResult: item => setSelectedResult(prev => {
@@ -153,17 +161,17 @@ function SearchModal(_ref2) {
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  });
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  }),
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  setResultsLength: setDiseaseResultsLength
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- }))))))), /*#__PURE__*/_react.default.createElement(_Col.default, {
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+ }))))))), /*#__PURE__*/React.createElement(_Col.default, {
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  xs: 12,
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  md: 4,
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  className: "bg-light p-3 search-modal-info"
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- }, selectedResult[tab] ? tab === FEATURE_TYPE.DISEASE ? /*#__PURE__*/_react.default.createElement(_SearchInfo.DiseaseInfo, {
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+ }, selectedResult[tab] ? tab === FEATURE_TYPE.DISEASE ? /*#__PURE__*/React.createElement(_SearchInfo.DiseaseInfo, {
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  disease: selectedResult.disease,
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  handleSelect: handleSelect,
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  addVarSet: addVarSet
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- }) : /*#__PURE__*/_react.default.createElement(_SearchInfo.VarInfo, {
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+ }) : /*#__PURE__*/React.createElement(_SearchInfo.VarInfo, {
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  varItem: selectedResult.var
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- }) : /*#__PURE__*/_react.default.createElement("div", {
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+ }) : /*#__PURE__*/React.createElement("div", {
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  className: "text-muted"
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  }, "No result selected"))))));
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  }
@@ -175,16 +183,16 @@ function SearchBar(_ref3) {
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  const [text, setText] = (0, _react.useState)("");
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  const displayText = [...(searchVar ? ["features"] : []), ...(searchDiseases ? ["diseases"] : [])].join(" and ");
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  const [showModal, setShowModal] = (0, _react.useState)(false);
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- return /*#__PURE__*/_react.default.createElement("div", null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form, {
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+ return /*#__PURE__*/React.createElement("div", null, /*#__PURE__*/React.createElement(_reactBootstrap.Form, {
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  onSubmit: e => {
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  e.preventDefault();
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  }
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.FormGroup, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.InputGroup, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.InputGroup.Text, null, /*#__PURE__*/_react.default.createElement(_Search.default, null)), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form.Control, {
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+ }, /*#__PURE__*/React.createElement(_reactBootstrap.FormGroup, null, /*#__PURE__*/React.createElement(_reactBootstrap.InputGroup, null, /*#__PURE__*/React.createElement(_reactBootstrap.InputGroup.Text, null, /*#__PURE__*/React.createElement(_Search.default, null)), /*#__PURE__*/React.createElement(_reactBootstrap.Form.Control, {
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  onClick: () => setShowModal(true),
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  type: "text",
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  placeholder: "Search " + displayText,
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  defaultValue: text
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- })))), /*#__PURE__*/_react.default.createElement(SearchModal, {
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+ })))), /*#__PURE__*/React.createElement(SearchModal, {
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  show: showModal,
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  text: text,
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  setText: setText,
package/dist/cjs/components/var-list/VarItem.js CHANGED
@@ -169,6 +169,24 @@ function SelectionItem(_ref3) {
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  data: fetchedData
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  }))));
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  }
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+ const select = (dispatch, mode, item) => {
173
+ if (mode === _constants.SELECTION_MODES.SINGLE) {
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+ dispatch({
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+ type: "select.var",
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+ var: item
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+ });
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+ } else if (mode === _constants.SELECTION_MODES.MULTIPLE) {
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+ dispatch({
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+ type: "select.multivar",
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+ var: item
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+ });
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+ }
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+ dispatch({
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+ type: "set.colorEncoding",
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+ value: _constants.COLOR_ENCODINGS.VAR
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+ });
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+ };
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+ const debounceSelect = _lodash.default.debounce(select, 200);
172
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  function VarItem(_ref4) {
173
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  let {
174
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  item,
@@ -177,27 +195,7 @@ function VarItem(_ref4) {
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  } = _ref4;
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  const settings = (0, _SettingsContext.useSettings)();
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  const dispatch = (0, _SettingsContext.useSettingsDispatch)();
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- const selectVar = () => {
181
- if (mode === _constants.SELECTION_MODES.SINGLE) {
182
- dispatch({
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- type: "select.var",
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- var: item
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- });
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- dispatch({
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- type: "set.colorEncoding",
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- value: _constants.COLOR_ENCODINGS.VAR
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- });
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- } else if (mode === _constants.SELECTION_MODES.MULTIPLE) {
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- dispatch({
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- type: "select.multivar",
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- var: item
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- });
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- dispatch({
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- type: "set.colorEncoding",
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- value: _constants.COLOR_ENCODINGS.VAR
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- });
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- }
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- };
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+ const selectVar = () => debounceSelect(dispatch, mode, item);
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  const removeVar = () => {
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  dispatch({
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  type: "remove.var",
package/dist/cjs/context/DatasetContext.js CHANGED
@@ -60,7 +60,7 @@ const persistOptions = {
60
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  return false;
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  }
62
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  },
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- buster: "1.4.0-dev.2025-06-20.988afab5" || "0.0.0"
63
+ buster: "1.4.0-dev.2025-06-20.3942a626" || "0.0.0"
64
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  // @TODO: add maxAge and api version numbers as buster
65
65
  };
66
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  const initialDataset = {
package/dist/cjs/context/SettingsContext.js CHANGED
@@ -140,7 +140,7 @@ function SettingsProvider(_ref2) {
140
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  // If the buster is not set or does not match the current package version,
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  // reset localSettings to avoid stale data
143
- if (!buster || buster !== "1.4.0-dev.2025-06-20.988afab5") {
143
+ if (!buster || buster !== "1.4.0-dev.2025-06-20.3942a626") {
144
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  localSettings = {};
145
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  }
146
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  const [settings, dispatch] = (0, _react.useReducer)(settingsReducer, {
@@ -152,7 +152,7 @@ function SettingsProvider(_ref2) {
152
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  if (canOverrideSettings) {
153
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  try {
154
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  localStorage.setItem(DATASET_STORAGE_KEY, JSON.stringify(_objectSpread({
155
- buster: "1.4.0-dev.2025-06-20.988afab5" || "0.0.0",
155
+ buster: "1.4.0-dev.2025-06-20.3942a626" || "0.0.0",
156
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  timestamp: Date.now()
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  }, settings)));
158
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  } catch (err) {
package/dist/esm/components/search-bar/SearchBar.js CHANGED
@@ -3,19 +3,20 @@ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t =
3
3
  function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
4
4
  function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
5
5
  function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
6
- import React, { useState } from "react";
6
+ import { useState } from "react";
7
7
  import CloseIcon from "@mui/icons-material/Close";
8
8
  import SearchIcon from "@mui/icons-material/Search";
9
+ import _ from "lodash";
9
10
  import { Button, Form, FormGroup, InputGroup, Modal } from "react-bootstrap";
10
11
  import Col from "react-bootstrap/Col";
11
12
  import Container from "react-bootstrap/Container";
12
13
  import Nav from "react-bootstrap/Nav";
13
14
  import Row from "react-bootstrap/Row";
14
15
  import Tab from "react-bootstrap/Tab";
16
+ import { COLOR_ENCODINGS } from "../../constants/constants";
15
17
  import { DiseaseInfo, VarInfo } from "./SearchInfo";
16
18
  import { DiseasesSearchResults, VarSearchResults } from "./SearchResults";
17
- import { COLOR_ENCODINGS } from "../../constants/constants";
18
- function onVarSelect(dispatch, item) {
19
+ const select = (dispatch, item) => {
19
20
  dispatch({
20
21
  type: "select.var",
21
22
  var: item
@@ -28,6 +29,14 @@ function onVarSelect(dispatch, item) {
28
29
  type: "set.colorEncoding",
29
30
  value: COLOR_ENCODINGS.VAR
30
31
  });
32
+ };
33
+ const debounceSelect = _.debounce(select, 2000);
34
+ function onVarSelect(dispatch, item) {
35
+ dispatch({
36
+ type: "add.var",
37
+ var: item
38
+ });
39
+ debounceSelect(dispatch, item);
31
40
  }
32
41
  function addVarSet(dispatch, _ref) {
33
42
  let {
package/dist/esm/components/var-list/VarItem.js CHANGED
@@ -159,6 +159,24 @@ export function SelectionItem(_ref3) {
159
159
  data: fetchedData
160
160
  }))));
161
161
  }
162
+ const select = (dispatch, mode, item) => {
163
+ if (mode === SELECTION_MODES.SINGLE) {
164
+ dispatch({
165
+ type: "select.var",
166
+ var: item
167
+ });
168
+ } else if (mode === SELECTION_MODES.MULTIPLE) {
169
+ dispatch({
170
+ type: "select.multivar",
171
+ var: item
172
+ });
173
+ }
174
+ dispatch({
175
+ type: "set.colorEncoding",
176
+ value: COLOR_ENCODINGS.VAR
177
+ });
178
+ };
179
+ const debounceSelect = _.debounce(select, 200);
162
180
  export function VarItem(_ref4) {
163
181
  let {
164
182
  item,
@@ -167,27 +185,7 @@ export function VarItem(_ref4) {
167
185
  } = _ref4;
168
186
  const settings = useSettings();
169
187
  const dispatch = useSettingsDispatch();
170
- const selectVar = () => {
171
- if (mode === SELECTION_MODES.SINGLE) {
172
- dispatch({
173
- type: "select.var",
174
- var: item
175
- });
176
- dispatch({
177
- type: "set.colorEncoding",
178
- value: COLOR_ENCODINGS.VAR
179
- });
180
- } else if (mode === SELECTION_MODES.MULTIPLE) {
181
- dispatch({
182
- type: "select.multivar",
183
- var: item
184
- });
185
- dispatch({
186
- type: "set.colorEncoding",
187
- value: COLOR_ENCODINGS.VAR
188
- });
189
- }
190
- };
188
+ const selectVar = () => debounceSelect(dispatch, mode, item);
191
189
  const removeVar = () => {
192
190
  dispatch({
193
191
  type: "remove.var",
package/dist/esm/context/DatasetContext.js CHANGED
@@ -50,7 +50,7 @@ const persistOptions = {
50
50
  return false;
51
51
  }
52
52
  },
53
- buster: "1.4.0-dev.2025-06-20.988afab5" || "0.0.0"
53
+ buster: "1.4.0-dev.2025-06-20.3942a626" || "0.0.0"
54
54
  // @TODO: add maxAge and api version numbers as buster
55
55
  };
56
56
  const initialDataset = {
package/dist/esm/context/SettingsContext.js CHANGED
@@ -129,7 +129,7 @@ export function SettingsProvider(_ref2) {
129
129
 
130
130
  // If the buster is not set or does not match the current package version,
131
131
  // reset localSettings to avoid stale data
132
- if (!buster || buster !== "1.4.0-dev.2025-06-20.988afab5") {
132
+ if (!buster || buster !== "1.4.0-dev.2025-06-20.3942a626") {
133
133
  localSettings = {};
134
134
  }
135
135
  const [settings, dispatch] = useReducer(settingsReducer, {
@@ -141,7 +141,7 @@ export function SettingsProvider(_ref2) {
141
141
  if (canOverrideSettings) {
142
142
  try {
143
143
  localStorage.setItem(DATASET_STORAGE_KEY, JSON.stringify(_objectSpread({
144
- buster: "1.4.0-dev.2025-06-20.988afab5" || "0.0.0",
144
+ buster: "1.4.0-dev.2025-06-20.3942a626" || "0.0.0",
145
145
  timestamp: Date.now()
146
146
  }, settings)));
147
147
  } catch (err) {
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@haniffalab/cherita-react",
3
- "version": "1.4.0-dev.2025-06-20.988afab5",
3
+ "version": "1.4.0-dev.2025-06-20.3942a626",
4
4
  "author": "Haniffa Lab",
5
5
  "license": "MIT",
6
6
  "keywords": [
@@ -128,5 +128,5 @@
128
128
  "url": "https://github.com/haniffalab/cherita-react/issues"
129
129
  },
130
130
  "homepage": "https://github.com/haniffalab/cherita-react#readme",
131
- "prereleaseSha": "988afab5df0a8c239cad62af7a71e64472729f20"
131
+ "prereleaseSha": "3942a626f9a560d3c1e88354da57b05960fdad94"
132
132
  }