@haniffalab/cherita-react 1.2.0 → 1.3.0-dev.2025-05-28.9afc380f
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/cjs/components/controls/Controls.js +60 -0
- package/dist/cjs/components/dotplot/Dotplot.js +47 -38
- package/dist/cjs/components/dotplot/DotplotControls.js +77 -114
- package/dist/cjs/components/full-page/FullPage.js +29 -33
- package/dist/cjs/components/full-page/FullPagePseudospatial.js +30 -33
- package/dist/cjs/components/heatmap/Heatmap.js +33 -22
- package/dist/cjs/components/heatmap/HeatmapControls.js +2 -19
- package/dist/cjs/components/matrixplot/Matrixplot.js +35 -24
- package/dist/cjs/components/matrixplot/MatrixplotControls.js +4 -34
- package/dist/cjs/components/obs-list/ObsItem.js +63 -51
- package/dist/cjs/components/obs-list/ObsList.js +53 -48
- package/dist/cjs/components/obsm-list/ObsmList.js +17 -12
- package/dist/cjs/components/offcanvas/index.js +14 -11
- package/dist/cjs/components/pseudospatial/Pseudospatial.js +78 -68
- package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +27 -21
- package/dist/cjs/components/scatterplot/Scatterplot.js +82 -76
- package/dist/cjs/components/scatterplot/ScatterplotControls.js +18 -31
- package/dist/cjs/components/scatterplot/SpatialControls.js +53 -23
- package/dist/cjs/components/scatterplot/Toolbox.js +1 -18
- package/dist/cjs/components/search-bar/SearchBar.js +156 -59
- package/dist/cjs/components/search-bar/SearchInfo.js +182 -0
- package/dist/cjs/components/search-bar/SearchResults.js +90 -60
- package/dist/cjs/components/var-list/VarItem.js +52 -75
- package/dist/cjs/components/var-list/VarList.js +47 -172
- package/dist/cjs/components/var-list/VarListToolbar.js +7 -8
- package/dist/cjs/components/var-list/VarSet.js +66 -57
- package/dist/cjs/components/violin/Violin.js +54 -43
- package/dist/cjs/components/violin/ViolinControls.js +4 -20
- package/dist/cjs/context/DatasetContext.js +26 -513
- package/dist/cjs/context/FilterContext.js +9 -8
- package/dist/cjs/context/SettingsContext.js +539 -0
- package/dist/cjs/context/ZarrDataContext.js +1 -2
- package/dist/cjs/helpers/color-helper.js +8 -8
- package/dist/cjs/helpers/zarr-helper.js +19 -16
- package/dist/cjs/utils/Filter.js +25 -21
- package/dist/cjs/utils/Histogram.js +4 -3
- package/dist/cjs/utils/ImageViewer.js +1 -2
- package/dist/cjs/utils/Legend.js +18 -12
- package/dist/cjs/utils/LoadingIndicators.js +1 -1
- package/dist/cjs/utils/VirtualizedList.js +16 -13
- package/dist/cjs/utils/errors.js +20 -22
- package/dist/cjs/utils/requests.js +13 -10
- package/dist/cjs/utils/zarrData.js +31 -50
- package/dist/css/cherita.css +84 -24
- package/dist/css/cherita.css.map +1 -1
- package/dist/esm/components/controls/Controls.js +51 -0
- package/dist/esm/components/dotplot/Dotplot.js +47 -37
- package/dist/esm/components/dotplot/DotplotControls.js +77 -112
- package/dist/esm/components/full-page/FullPage.js +29 -32
- package/dist/esm/components/full-page/FullPagePseudospatial.js +30 -32
- package/dist/esm/components/heatmap/Heatmap.js +32 -20
- package/dist/esm/components/heatmap/HeatmapControls.js +3 -20
- package/dist/esm/components/matrixplot/Matrixplot.js +34 -22
- package/dist/esm/components/matrixplot/MatrixplotControls.js +5 -35
- package/dist/esm/components/obs-list/ObsItem.js +63 -49
- package/dist/esm/components/obs-list/ObsList.js +53 -47
- package/dist/esm/components/obsm-list/ObsmList.js +17 -11
- package/dist/esm/components/offcanvas/index.js +14 -11
- package/dist/esm/components/pseudospatial/Pseudospatial.js +77 -66
- package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +27 -20
- package/dist/esm/components/scatterplot/Scatterplot.js +81 -74
- package/dist/esm/components/scatterplot/ScatterplotControls.js +18 -29
- package/dist/esm/components/scatterplot/SpatialControls.js +54 -23
- package/dist/esm/components/scatterplot/Toolbox.js +1 -18
- package/dist/esm/components/search-bar/SearchBar.js +156 -59
- package/dist/esm/components/search-bar/SearchInfo.js +173 -0
- package/dist/esm/components/search-bar/SearchResults.js +91 -60
- package/dist/esm/components/var-list/VarItem.js +53 -76
- package/dist/esm/components/var-list/VarList.js +47 -171
- package/dist/esm/components/var-list/VarListToolbar.js +6 -6
- package/dist/esm/components/var-list/VarSet.js +67 -57
- package/dist/esm/components/violin/Violin.js +53 -41
- package/dist/esm/components/violin/ViolinControls.js +5 -21
- package/dist/esm/context/DatasetContext.js +25 -510
- package/dist/esm/context/FilterContext.js +8 -6
- package/dist/esm/context/SettingsContext.js +528 -0
- package/dist/esm/helpers/color-helper.js +8 -8
- package/dist/esm/helpers/zarr-helper.js +19 -16
- package/dist/esm/utils/Filter.js +25 -21
- package/dist/esm/utils/Histogram.js +4 -3
- package/dist/esm/utils/Legend.js +17 -10
- package/dist/esm/utils/LoadingIndicators.js +1 -1
- package/dist/esm/utils/VirtualizedList.js +15 -11
- package/dist/esm/utils/errors.js +20 -22
- package/dist/esm/utils/requests.js +13 -10
- package/dist/esm/utils/zarrData.js +33 -51
- package/package.json +6 -3
- package/scss/cherita.scss +50 -9
- package/scss/components/layouts.scss +24 -13
- package/scss/components/lists.scss +10 -0
- package/scss/components/plots.scss +3 -5
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@@ -19,14 +19,18 @@ var _Scatterplot = require("../scatterplot/Scatterplot");
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var _ScatterplotControls = require("../scatterplot/ScatterplotControls");
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var _SearchBar = require("../search-bar/SearchBar");
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var _VarList = require("../var-list/VarList");
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function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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function _extends() { return _extends = Object.assign ? Object.assign.bind() : function (n) { for (var e = 1; e < arguments.length; e++) { var t = arguments[e]; for (var r in t) ({}).hasOwnProperty.call(t, r) && (n[r] = t[r]); } return n; }, _extends.apply(null, arguments); }
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function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
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function FullPage(_ref) {
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}, "Observations")), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Nav.Item, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Nav.Link, {
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}, "Controls")))))), /*#__PURE__*/_react.default.createElement("div", {
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className: "cherita-app-obs modern-scrollbars border-end h-100"
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}, /*#__PURE__*/_react.default.createElement(_ObsList.ObsColsList, props)), /*#__PURE__*/_react.default.createElement("div", {
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})), /*#__PURE__*/_react.default.createElement("div", {
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className: "cherita-app-sidebar p-3"
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}, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Card, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Card.Header, {
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className: "d-flex justify-content-evenly align-items-center"
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})), /*#__PURE__*/_react.default.createElement("div", {
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className: "sidebar-features modern-scrollbars"
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}, /*#__PURE__*/_react.default.createElement(_SearchBar.SearchBar, {
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searchDiseases: searchDiseases,
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searchVar: true
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}), /*#__PURE__*/_react.default.createElement(_VarList.VarNamesList, {
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}), /*#__PURE__*/_react.default.createElement(_offcanvas.OffcanvasVars, {
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}), /*#__PURE__*/_react.default.createElement(_offcanvas.OffcanvasControls, {
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return /*#__PURE__*/_react.default.createElement(FullPage, _extends({}, props, {
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varMode: _constants.SELECTION_MODES.SINGLE
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}), _ref2 => {
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setShowObs,
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setShowVars
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} = _ref2;
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return /*#__PURE__*/_react.default.createElement(_Scatterplot.Scatterplot, {
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setShowObs: setShowObs,
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setShowVars: setShowVars,
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isFullscreen: true
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});
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});
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var _DatasetContext = require("../../context/DatasetContext");
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var _FilterContext = require("../../context/FilterContext");
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var _SettingsContext = require("../../context/SettingsContext");
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function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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function Heatmap() {
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var _settings$selectedObs, _settings$selectedObs2, _settings$selectedObs3;
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const ENDPOINT = "heatmap";
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const dataset = (0, _DatasetContext.useDataset)();
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const settings = (0, _SettingsContext.useSettings)();
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const colorscale = (0, _react.useRef)(settings.controls.colorScale);
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const [layout, setLayout] = (0, _react.useState)({});
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const [hasSelections, setHasSelections] = (0, _react.useState)(false);
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const [params, setParams] = (0, _react.useState)({
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url: dataset.url,
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obsValues: !((_settings$selectedObs = settings.selectedObs) !== null && _settings$selectedObs !== void 0 && _settings$selectedObs.omit.length) ? null : _lodash.default.difference(_lodash.default.values((_settings$selectedObs2 = settings.selectedObs) === null || _settings$selectedObs2 === void 0 ? void 0 : _settings$selectedObs2.codes), (_settings$selectedObs3 = settings.selectedObs) === null || _settings$selectedObs3 === void 0 ? void 0 : _settings$selectedObs3.omit).map(c => {
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}),
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setParams(p => {
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