@haniffalab/cherita-react 1.2.0-dev.2025-05-21.31931945 → 1.2.0-dev.2025-05-21.e57ef5f2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (79) hide show
  1. package/dist/cjs/components/dotplot/Dotplot.js +26 -19
  2. package/dist/cjs/components/dotplot/DotplotControls.js +17 -19
  3. package/dist/cjs/components/full-page/FullPage.js +9 -7
  4. package/dist/cjs/components/full-page/FullPagePseudospatial.js +9 -7
  5. package/dist/cjs/components/heatmap/Heatmap.js +22 -13
  6. package/dist/cjs/components/matrixplot/Matrixplot.js +22 -13
  7. package/dist/cjs/components/obs-list/ObsItem.js +37 -29
  8. package/dist/cjs/components/obs-list/ObsList.js +47 -44
  9. package/dist/cjs/components/obsm-list/ObsmList.js +9 -6
  10. package/dist/cjs/components/offcanvas/index.js +13 -9
  11. package/dist/cjs/components/pseudospatial/Pseudospatial.js +61 -53
  12. package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +17 -11
  13. package/dist/cjs/components/scatterplot/Scatterplot.js +52 -52
  14. package/dist/cjs/components/scatterplot/ScatterplotControls.js +3 -3
  15. package/dist/cjs/components/scatterplot/SpatialControls.js +4 -4
  16. package/dist/cjs/components/search-bar/SearchBar.js +12 -10
  17. package/dist/cjs/components/search-bar/SearchInfo.js +14 -13
  18. package/dist/cjs/components/search-bar/SearchResults.js +16 -14
  19. package/dist/cjs/components/var-list/VarItem.js +37 -120
  20. package/dist/cjs/components/var-list/VarList.js +16 -13
  21. package/dist/cjs/components/var-list/VarListToolbar.js +1 -2
  22. package/dist/cjs/components/var-list/VarSet.js +17 -29
  23. package/dist/cjs/components/violin/Violin.js +44 -35
  24. package/dist/cjs/context/DatasetContext.js +17 -11
  25. package/dist/cjs/context/FilterContext.js +9 -8
  26. package/dist/cjs/context/SettingsContext.js +169 -237
  27. package/dist/cjs/context/ZarrDataContext.js +1 -2
  28. package/dist/cjs/helpers/color-helper.js +3 -3
  29. package/dist/cjs/helpers/zarr-helper.js +15 -12
  30. package/dist/cjs/utils/Filter.js +13 -9
  31. package/dist/cjs/utils/Histogram.js +4 -3
  32. package/dist/cjs/utils/ImageViewer.js +1 -2
  33. package/dist/cjs/utils/Legend.js +3 -3
  34. package/dist/cjs/utils/LoadingIndicators.js +1 -1
  35. package/dist/cjs/utils/VirtualizedList.js +16 -13
  36. package/dist/cjs/utils/errors.js +20 -22
  37. package/dist/cjs/utils/requests.js +13 -10
  38. package/dist/cjs/utils/zarrData.js +12 -8
  39. package/dist/css/cherita.css +24 -10
  40. package/dist/css/cherita.css.map +1 -1
  41. package/dist/esm/components/dotplot/Dotplot.js +25 -17
  42. package/dist/esm/components/dotplot/DotplotControls.js +16 -17
  43. package/dist/esm/components/full-page/FullPage.js +8 -5
  44. package/dist/esm/components/full-page/FullPagePseudospatial.js +8 -5
  45. package/dist/esm/components/heatmap/Heatmap.js +21 -11
  46. package/dist/esm/components/matrixplot/Matrixplot.js +21 -11
  47. package/dist/esm/components/obs-list/ObsItem.js +36 -27
  48. package/dist/esm/components/obs-list/ObsList.js +46 -42
  49. package/dist/esm/components/obsm-list/ObsmList.js +8 -4
  50. package/dist/esm/components/offcanvas/index.js +13 -9
  51. package/dist/esm/components/pseudospatial/Pseudospatial.js +60 -51
  52. package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +16 -9
  53. package/dist/esm/components/scatterplot/Scatterplot.js +51 -50
  54. package/dist/esm/components/scatterplot/ScatterplotControls.js +2 -1
  55. package/dist/esm/components/scatterplot/SpatialControls.js +3 -2
  56. package/dist/esm/components/search-bar/SearchBar.js +11 -8
  57. package/dist/esm/components/search-bar/SearchInfo.js +13 -11
  58. package/dist/esm/components/search-bar/SearchResults.js +15 -12
  59. package/dist/esm/components/var-list/VarItem.js +36 -117
  60. package/dist/esm/components/var-list/VarList.js +15 -11
  61. package/dist/esm/components/var-list/VarSet.js +17 -28
  62. package/dist/esm/components/violin/Violin.js +43 -33
  63. package/dist/esm/context/DatasetContext.js +16 -9
  64. package/dist/esm/context/FilterContext.js +8 -6
  65. package/dist/esm/context/SettingsContext.js +168 -235
  66. package/dist/esm/helpers/color-helper.js +3 -3
  67. package/dist/esm/helpers/zarr-helper.js +15 -12
  68. package/dist/esm/utils/Filter.js +13 -9
  69. package/dist/esm/utils/Histogram.js +4 -3
  70. package/dist/esm/utils/Legend.js +2 -1
  71. package/dist/esm/utils/LoadingIndicators.js +1 -1
  72. package/dist/esm/utils/VirtualizedList.js +15 -11
  73. package/dist/esm/utils/errors.js +20 -22
  74. package/dist/esm/utils/requests.js +13 -10
  75. package/dist/esm/utils/zarrData.js +12 -8
  76. package/package.json +4 -2
  77. package/scss/cherita.scss +5 -0
  78. package/scss/components/layouts.scss +4 -0
  79. package/scss/components/lists.scss +4 -5
@@ -14,9 +14,16 @@ var _lodash = _interopRequireDefault(require("lodash"));
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  var _FilterContext = require("./FilterContext");
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  var _SettingsContext = require("./SettingsContext");
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  var _ZarrDataContext = require("./ZarrDataContext");
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+ const _excluded = ["dataset_url", "children"];
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  function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
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- function _getRequireWildcardCache(e) { if ("function" != typeof WeakMap) return null; var r = new WeakMap(), t = new WeakMap(); return (_getRequireWildcardCache = function (e) { return e ? t : r; })(e); }
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- function _interopRequireWildcard(e, r) { if (!r && e && e.__esModule) return e; if (null === e || "object" != typeof e && "function" != typeof e) return { default: e }; var t = _getRequireWildcardCache(r); if (t && t.has(e)) return t.get(e); var n = { __proto__: null }, a = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var u in e) if ("default" !== u && {}.hasOwnProperty.call(e, u)) { var i = a ? Object.getOwnPropertyDescriptor(e, u) : null; i && (i.get || i.set) ? Object.defineProperty(n, u, i) : n[u] = e[u]; } return n.default = e, t && t.set(e, n), n; }
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+ function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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+ function _objectWithoutProperties(e, t) { if (null == e) return {}; var o, r, i = _objectWithoutPropertiesLoose(e, t); if (Object.getOwnPropertySymbols) { var n = Object.getOwnPropertySymbols(e); for (r = 0; r < n.length; r++) o = n[r], -1 === t.indexOf(o) && {}.propertyIsEnumerable.call(e, o) && (i[o] = e[o]); } return i; }
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+ function _objectWithoutPropertiesLoose(r, e) { if (null == r) return {}; var t = {}; for (var n in r) if ({}.hasOwnProperty.call(r, n)) { if (-1 !== e.indexOf(n)) continue; t[n] = r[n]; } return t; }
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  const DatasetContext = exports.DatasetContext = /*#__PURE__*/(0, _react.createContext)(null);
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  const queryClient = new _reactQuery.QueryClient({
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  defaultOptions: {
@@ -48,7 +55,7 @@ const persistOptions = {
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  state
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  } = _ref;
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  if (state.status === "success") {
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- return persistKeys.includes(queryKey?.[0]);
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+ return persistKeys.includes(queryKey === null || queryKey === void 0 ? void 0 : queryKey[0]);
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  }
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  return false;
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  }
@@ -66,14 +73,13 @@ const initialDataset = {
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  };
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  function DatasetProvider(_ref2) {
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  let {
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- dataset_url,
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- children,
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- ...dataset_params
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- } = _ref2;
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- const dataset = _lodash.default.assign(initialDataset, {
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- url: dataset_url,
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- ...dataset_params
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- });
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+ dataset_url,
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+ children
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+ } = _ref2,
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+ dataset_params = _objectWithoutProperties(_ref2, _excluded);
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+ const dataset = _lodash.default.assign(initialDataset, _objectSpread({
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+ url: dataset_url
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+ }, dataset_params));
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  return /*#__PURE__*/_react.default.createElement(DatasetContext.Provider, {
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  value: dataset
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  }, /*#__PURE__*/_react.default.createElement(_SettingsContext.SettingsProvider, {
@@ -8,8 +8,12 @@ exports.FilteredDataDispatchContext = exports.FilteredDataContext = void 0;
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  exports.useFilteredData = useFilteredData;
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  exports.useFilteredDataDispatch = useFilteredDataDispatch;
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  var _react = _interopRequireWildcard(require("react"));
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- function _getRequireWildcardCache(e) { if ("function" != typeof WeakMap) return null; var r = new WeakMap(), t = new WeakMap(); return (_getRequireWildcardCache = function (e) { return e ? t : r; })(e); }
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- function _interopRequireWildcard(e, r) { if (!r && e && e.__esModule) return e; if (null === e || "object" != typeof e && "function" != typeof e) return { default: e }; var t = _getRequireWildcardCache(r); if (t && t.has(e)) return t.get(e); var n = { __proto__: null }, a = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var u in e) if ("default" !== u && {}.hasOwnProperty.call(e, u)) { var i = a ? Object.getOwnPropertyDescriptor(e, u) : null; i && (i.get || i.set) ? Object.defineProperty(n, u, i) : n[u] = e[u]; } return n.default = e, t && t.set(e, n), n; }
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+ function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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+ function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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+ function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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+ function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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+ function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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+ function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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  const FilteredDataContext = exports.FilteredDataContext = /*#__PURE__*/(0, _react.createContext)(null);
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  const FilteredDataDispatchContext = exports.FilteredDataDispatchContext = /*#__PURE__*/(0, _react.createContext)(null);
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  const initialFilterData = {
@@ -23,9 +27,7 @@ function FilterProvider(_ref) {
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  let {
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  children
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  } = _ref;
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- const [filteredData, dispatch] = (0, _react.useReducer)(filterReducer, {
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- ...initialFilterData
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- });
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+ const [filteredData, dispatch] = (0, _react.useReducer)(filterReducer, _objectSpread({}, initialFilterData));
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  return /*#__PURE__*/_react.default.createElement(FilteredDataContext.Provider, {
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  value: filteredData
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  }, /*#__PURE__*/_react.default.createElement(FilteredDataDispatchContext.Provider, {
@@ -42,14 +44,13 @@ function filterReducer(filteredData, action) {
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  switch (action.type) {
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  case "set.obs.indices":
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  {
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- return {
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- ...filteredData,
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+ return _objectSpread(_objectSpread({}, filteredData), {}, {
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  obsIndices: action.indices,
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  valueMin: action.valueMin,
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  valueMax: action.valueMax,
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  slicedLength: action.slicedLength,
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  isSliced: action.isSliced
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- };
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+ });
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  }
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  default:
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  {