@gzoo/cortex 0.5.9 → 0.5.11

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@gzoo/cortex",
-  "version": "0.5.9",
+  "version": "0.5.11",
   "description": "Local-first knowledge graph that watches your project files, extracts entities and relationships via LLMs, and lets you query across projects in natural language.",
   "type": "module",
   "license": "MIT",

package/packages/mcp/dist/server.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../src/server.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEpE,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,oBAAoB,CAAC;AACtD,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAU1C,wBAAgB,qBAAqB,CAAC,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,MAAM,GAAG,SAAS,CAyNpF"}

package/packages/mcp/dist/server.js

@@ -5,6 +5,9 @@ import { handleFindEntity } from './tools/find.js';
 import { handleListProjects } from './tools/projects.js';
 import { handleGetStatus } from './tools/status.js';
 import { handleGetContradictions, handleResolveContradiction } from './tools/contradictions.js';
+import { handleSearchEntities } from './tools/search.js';
+import { handleIngestFile } from './tools/ingest.js';
+import { handleAddProject, handleRemoveProject } from './tools/manage.js';
 export function createCortexMcpServer(bundle, router) {
     const server = new McpServer({
         name: 'cortex',
@@ -82,6 +85,59 @@ export function createCortexMcpServer(bundle, router) {
         const result = await handleResolveContradiction({ id, action }, bundle.store);
         return { content: [{ type: 'text', text: result }] };
     });
+    server.registerTool('search_entities', {
+        title: 'Search Entities',
+        description: 'Search across all entities in the knowledge graph using full-text search. ' +
+            'Returns matching entities ranked by relevance. Use this for broad searches ' +
+            'when you don\'t know the exact entity name.',
+        inputSchema: {
+            query: z.string().describe('Search text (keywords, phrases)'),
+            limit: z.number().optional().describe('Max results to return (default: 20, max: 100)'),
+            type: z.string().optional().describe('Filter by entity type: Decision, Requirement, Pattern, Component, ' +
+                'Dependency, Interface, Constraint, ActionItem, Risk, Note'),
+        },
+    }, async ({ query, limit, type }) => {
+        const result = await handleSearchEntities({ query, limit, type }, bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('ingest_file', {
+        title: 'Ingest File',
+        description: 'Trigger ingestion of a single file into the knowledge graph. Extracts entities ' +
+            'and relationships using LLMs. The file must belong to a registered project. ' +
+            'If projectId is omitted, Cortex auto-detects the project from the file path.',
+        inputSchema: {
+            filePath: z.string().describe('Absolute path to the file to ingest'),
+            projectId: z.string().optional().describe('Project ID to ingest into. If omitted, auto-detected from file path.'),
+        },
+    }, async ({ filePath, projectId }) => {
+        const result = await handleIngestFile({ filePath, projectId }, bundle.store, router);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('add_project', {
+        title: 'Add Project',
+        description: 'Register a new project directory for Cortex to watch and index. ' +
+            'The path must exist and be a directory.',
+        inputSchema: {
+            name: z.string().describe('Unique project name (e.g., "my-app", "api-server")'),
+            path: z.string().describe('Absolute path to the project root directory'),
+            privacyLevel: z.string().optional().describe('Privacy level: standard (default), sensitive, or restricted. ' +
+                'Restricted projects are never sent to cloud LLMs.'),
+        },
+    }, async ({ name, path, privacyLevel }) => {
+        const result = await handleAddProject({ name, path, privacyLevel: privacyLevel }, bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('remove_project', {
+        title: 'Remove Project',
+        description: 'Unregister a project from Cortex. Removes it from the project registry but ' +
+            'preserves all extracted entities in the knowledge graph.',
+        inputSchema: {
+            name: z.string().describe('Name of the project to remove'),
+        },
+    }, async ({ name }) => {
+        const result = await handleRemoveProject({ name });
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
     return server;
 }
 //# sourceMappingURL=server.js.map

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@@ -1 +1 @@
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package/packages/mcp/dist/tools/ingest.d.ts

@@ -0,0 +1,16 @@
+import type { SQLiteStore } from '@cortex/graph';
+import type { Router } from '@cortex/llm';
+export interface IngestFileInput {
+    filePath: string;
+    projectId?: string;
+}
+export interface IngestFileResult {
+    status: string;
+    fileId: string;
+    entityIds: string[];
+    relationshipIds: string[];
+    entityCount: number;
+    error?: string;
+}
+export declare function handleIngestFile(input: IngestFileInput, store: SQLiteStore, router: Router): Promise<IngestFileResult>;
+//# sourceMappingURL=ingest.d.ts.map

package/packages/mcp/dist/tools/ingest.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"ingest.d.ts","sourceRoot":"","sources":["../../src/tools/ingest.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AACjD,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAI1C,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,gBAAgB;IAC/B,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,EAAE,MAAM,CAAC;IACf,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,eAAe,EAAE,MAAM,EAAE,CAAC;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,wBAAsB,gBAAgB,CACpC,KAAK,EAAE,eAAe,EACtB,KAAK,EAAE,WAAW,EAClB,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,gBAAgB,CAAC,CAkE3B"}

package/packages/mcp/dist/tools/ingest.js

@@ -0,0 +1,65 @@
+import { existsSync, statSync } from 'node:fs';
+import { resolve } from 'node:path';
+import { IngestionPipeline } from '@cortex/ingest';
+import { findProjectByPath } from '@cortex/core';
+export async function handleIngestFile(input, store, router) {
+    const filePath = resolve(input.filePath);
+    if (!existsSync(filePath)) {
+        return { status: 'failed', fileId: '', entityIds: [], relationshipIds: [], entityCount: 0, error: 'File not found' };
+    }
+    const stat = statSync(filePath);
+    if (!stat.isFile()) {
+        return { status: 'failed', fileId: '', entityIds: [], relationshipIds: [], entityCount: 0, error: 'Path is not a file' };
+    }
+    // Find project context
+    let project = null;
+    if (input.projectId) {
+        project = await store.getProject(input.projectId);
+        if (!project) {
+            return { status: 'failed', fileId: '', entityIds: [], relationshipIds: [], entityCount: 0, error: 'Project not found' };
+        }
+    }
+    else {
+        // Auto-detect project from file path
+        const projects = await store.listProjects();
+        for (const p of projects) {
+            const root = p.rootPath.replace(/\\/g, '/').toLowerCase();
+            const file = filePath.replace(/\\/g, '/').toLowerCase();
+            if (file.startsWith(root + '/') || file === root) {
+                project = p;
+                break;
+            }
+        }
+        if (!project) {
+            // Try file-based registry
+            const entry = findProjectByPath(filePath);
+            if (entry) {
+                // Find matching DB project by name
+                const dbProjects = await store.listProjects();
+                project = dbProjects.find((p) => p.name === entry.name) ?? null;
+            }
+        }
+    }
+    if (!project) {
+        return { status: 'failed', fileId: '', entityIds: [], relationshipIds: [], entityCount: 0, error: 'File does not belong to any registered project' };
+    }
+    const pipeline = new IngestionPipeline(router, store, {
+        projectId: project.id,
+        projectName: project.name,
+        projectRoot: project.rootPath,
+        maxFileSize: 1_048_576,
+        batchSize: 10,
+        projectPrivacyLevel: project.privacyLevel ?? 'standard',
+        mergeConfidenceThreshold: 0.85,
+    });
+    const result = await pipeline.ingestFile(filePath);
+    return {
+        status: result.status,
+        fileId: result.fileId,
+        entityIds: result.entityIds,
+        relationshipIds: result.relationshipIds,
+        entityCount: result.entityIds.length,
+        error: result.error,
+    };
+}
+//# sourceMappingURL=ingest.js.map

package/packages/mcp/dist/tools/ingest.js.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/tools/manage.d.ts

@@ -0,0 +1,28 @@
+import type { SQLiteStore } from '@cortex/graph';
+export interface AddProjectInput {
+    name: string;
+    path: string;
+    privacyLevel?: 'standard' | 'sensitive' | 'restricted';
+}
+export interface AddProjectResult {
+    success: boolean;
+    project?: {
+        id: string;
+        name: string;
+        rootPath: string;
+        privacyLevel: string;
+    };
+    error?: string;
+}
+export declare function handleAddProject(input: AddProjectInput, store: SQLiteStore): Promise<AddProjectResult>;
+export interface RemoveProjectInput {
+    name: string;
+}
+export interface RemoveProjectResult {
+    success: boolean;
+    removed?: string;
+    note?: string;
+    error?: string;
+}
+export declare function handleRemoveProject(input: RemoveProjectInput): Promise<RemoveProjectResult>;
+//# sourceMappingURL=manage.d.ts.map

package/packages/mcp/dist/tools/manage.d.ts.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/tools/manage.js

@@ -0,0 +1,54 @@
+import { existsSync, statSync } from 'node:fs';
+import { resolve } from 'node:path';
+import { addProject as addProjectToRegistry, removeProject as removeProjectFromRegistry, getProject as getRegistryProject, } from '@cortex/core';
+export async function handleAddProject(input, store) {
+    const rootPath = resolve(input.path);
+    if (!existsSync(rootPath)) {
+        return { success: false, error: 'Path does not exist' };
+    }
+    const stat = statSync(rootPath);
+    if (!stat.isDirectory()) {
+        return { success: false, error: 'Path is not a directory' };
+    }
+    // Check if already registered
+    const existing = getRegistryProject(input.name);
+    if (existing) {
+        return { success: false, error: `Project "${input.name}" already exists` };
+    }
+    // Add to file-based registry
+    addProjectToRegistry(input.name, rootPath);
+    // Add to DB
+    const privacyLevel = input.privacyLevel ?? 'standard';
+    const project = await store.createProject({
+        name: input.name,
+        rootPath,
+        privacyLevel,
+        fileCount: 0,
+        entityCount: 0,
+    });
+    return {
+        success: true,
+        project: {
+            id: project.id,
+            name: project.name,
+            rootPath: project.rootPath,
+            privacyLevel: project.privacyLevel,
+        },
+    };
+}
+export async function handleRemoveProject(input) {
+    const existing = getRegistryProject(input.name);
+    if (!existing) {
+        return { success: false, error: `Project "${input.name}" not found in registry` };
+    }
+    const removed = removeProjectFromRegistry(input.name);
+    if (!removed) {
+        return { success: false, error: 'Failed to remove project from registry' };
+    }
+    return {
+        success: true,
+        removed: input.name,
+        note: 'Project removed from registry. Entities are preserved in the knowledge graph.',
+    };
+}
+//# sourceMappingURL=manage.js.map

package/packages/mcp/dist/tools/manage.js.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/tools/search.d.ts

@@ -0,0 +1,20 @@
+import type { SQLiteStore } from '@cortex/graph';
+export interface SearchEntitiesInput {
+    query: string;
+    limit?: number;
+    type?: string;
+}
+export interface SearchEntitiesResult {
+    count: number;
+    entities: Array<{
+        id: string;
+        type: string;
+        name: string;
+        summary?: string;
+        sourceFile: string;
+        confidence: number;
+        tags: string[];
+    }>;
+}
+export declare function handleSearchEntities(input: SearchEntitiesInput, store: SQLiteStore): Promise<SearchEntitiesResult>;
+//# sourceMappingURL=search.d.ts.map

package/packages/mcp/dist/tools/search.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/tools/search.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAEjD,MAAM,WAAW,mBAAmB;IAClC,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,oBAAoB;IACnC,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,KAAK,CAAC;QACd,EAAE,EAAE,MAAM,CAAC;QACX,IAAI,EAAE,MAAM,CAAC;QACb,IAAI,EAAE,MAAM,CAAC;QACb,OAAO,CAAC,EAAE,MAAM,CAAC;QACjB,UAAU,EAAE,MAAM,CAAC;QACnB,UAAU,EAAE,MAAM,CAAC;QACnB,IAAI,EAAE,MAAM,EAAE,CAAC;KAChB,CAAC,CAAC;CACJ;AAED,wBAAsB,oBAAoB,CACxC,KAAK,EAAE,mBAAmB,EAC1B,KAAK,EAAE,WAAW,GACjB,OAAO,CAAC,oBAAoB,CAAC,CAoB/B"}

package/packages/mcp/dist/tools/search.js

@@ -0,0 +1,20 @@
+export async function handleSearchEntities(input, store) {
+    const limit = Math.max(1, Math.min(input.limit ?? 20, 100));
+    let entities = await store.searchEntities(input.query, limit);
+    if (input.type) {
+        entities = entities.filter((e) => e.type === input.type);
+    }
+    return {
+        count: entities.length,
+        entities: entities.map((e) => ({
+            id: e.id,
+            type: e.type,
+            name: e.name,
+            summary: e.summary,
+            sourceFile: e.sourceFile,
+            confidence: e.confidence,
+            tags: e.tags,
+        })),
+    };
+}
+//# sourceMappingURL=search.js.map

package/packages/mcp/dist/tools/search.js.map

@@ -0,0 +1 @@
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