@gt-fe/eap-sdk 0.1.13 → 0.2.1

package/dist/lockfile/resolve-dependencies.d.ts

@@ -14,6 +14,7 @@ export declare function resolveLockedResources(options: {
     root: string;
     manifest: AgentManifest;
     lock: EapLock;
+    availableLocalResources?: Partial<Record<MaterializedResourceKind, ReadonlySet<string>>>;
 }): ResolvedLockedResource[];
 export declare function findUndeclaredLockedResources(manifest: AgentManifest, lock: EapLock): Array<LockResource & {
     kind: MaterializedResourceKind;

package/dist/lockfile/resolve-dependencies.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"resolve-dependencies.d.ts","sourceRoot":"","sources":["../../src/lockfile/resolve-dependencies.ts"],"names":[],"mappings":"AAGA,OAAO,EAAgC,KAAK,aAAa,EAAE,KAAK,OAAO,EAAE,KAAK,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAEvH,OAAO,KAAK,EAAE,wBAAwB,EAAE,sBAAsB,EAAE,MAAM,YAAY,CAAC;AAEnF,qBAAa,6BAA8B,SAAQ,KAAK;IACzB,QAAQ,CAAC,QAAQ,CAAC,EAAE;QAAE,IAAI,EAAE,wBAAwB,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE;gBAArF,OAAO,EAAE,MAAM,EAAW,QAAQ,CAAC,EAAE;QAAE,IAAI,EAAE,wBAAwB,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,YAAA;CAIlG;AAED,wBAAgB,sBAAsB,CAAC,OAAO,EAAE;IAC9C,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,aAAa,CAAC;IACxB,IAAI,EAAE,OAAO,CAAC;CACf,GAAG,sBAAsB,EAAE,CA8B3B;AAcD,wBAAgB,6BAA6B,CAC3C,QAAQ,EAAE,aAAa,EACvB,IAAI,EAAE,OAAO,GACZ,KAAK,CAAC,YAAY,GAAG;IAAE,IAAI,EAAE,wBAAwB,CAAA;CAAE,CAAC,CAM1D;AAED,wBAAgB,qBAAqB,CACnC,QAAQ,EAAE,aAAa,EACvB,IAAI,EAAE,wBAAwB,GAC7B,MAAM,EAAE,CAQV"}
+{"version":3,"file":"resolve-dependencies.d.ts","sourceRoot":"","sources":["../../src/lockfile/resolve-dependencies.ts"],"names":[],"mappings":"AAGA,OAAO,EAAgC,KAAK,aAAa,EAAE,KAAK,OAAO,EAAE,KAAK,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAEvH,OAAO,KAAK,EAAE,wBAAwB,EAAE,sBAAsB,EAAE,MAAM,YAAY,CAAC;AAEnF,qBAAa,6BAA8B,SAAQ,KAAK;IACzB,QAAQ,CAAC,QAAQ,CAAC,EAAE;QAAE,IAAI,EAAE,wBAAwB,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE;gBAArF,OAAO,EAAE,MAAM,EAAW,QAAQ,CAAC,EAAE;QAAE,IAAI,EAAE,wBAAwB,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,YAAA;CAIlG;AAED,wBAAgB,sBAAsB,CAAC,OAAO,EAAE;IAC9C,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,aAAa,CAAC;IACxB,IAAI,EAAE,OAAO,CAAC;IACd,uBAAuB,CAAC,EAAE,OAAO,CAAC,MAAM,CAAC,wBAAwB,EAAE,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;CAC1F,GAAG,sBAAsB,EAAE,CAgC3B;AAcD,wBAAgB,6BAA6B,CAC3C,QAAQ,EAAE,aAAa,EACvB,IAAI,EAAE,OAAO,GACZ,KAAK,CAAC,YAAY,GAAG;IAAE,IAAI,EAAE,wBAAwB,CAAA;CAAE,CAAC,CAM1D;AAED,wBAAgB,qBAAqB,CACnC,QAAQ,EAAE,aAAa,EACvB,IAAI,EAAE,wBAAwB,GAC7B,MAAM,EAAE,CAQV"}

package/dist/lockfile/resolve-dependencies.js

@@ -16,6 +16,9 @@ export function resolveLockedResources(options) {
     for (const kind of ['tools', 'skills']) {
         for (const code of declaredResourceCodes(options.manifest, kind)) {
             const entries = options.lock.resources[kind].filter((entry) => entry.code === code);
+            const availableFromConfig = options.availableLocalResources?.[kind]?.has(code) === true;
+            if (availableFromConfig)
+                continue;
             if (entries.length === 0 && kind === 'skills' && findLocalSkillEntryFile(resolve(root, 'skills', code))) {
                 continue;
             }

package/dist/lockfile/resolve-dependencies.js.map

@@ -1 +1 @@
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package/dist/materialization/copy-resource-directory.d.ts

@@ -1,2 +1,3 @@
 export declare function copyResourceDirectory(source: string, destination: string): void;
+export declare function resourceDirectoryDigest(source: string): string;
 //# sourceMappingURL=copy-resource-directory.d.ts.map

package/dist/materialization/copy-resource-directory.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"copy-resource-directory.d.ts","sourceRoot":"","sources":["../../src/materialization/copy-resource-directory.ts"],"names":[],"mappings":"AAKA,wBAAgB,qBAAqB,CAAC,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,IAAI,CAM/E"}
+{"version":3,"file":"copy-resource-directory.d.ts","sourceRoot":"","sources":["../../src/materialization/copy-resource-directory.ts"],"names":[],"mappings":"AAMA,wBAAgB,qBAAqB,CAAC,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,IAAI,CAM/E;AAED,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAQ9D"}

package/dist/materialization/copy-resource-directory.js

@@ -1,4 +1,5 @@
-import { copyFileSync, lstatSync, mkdirSync, readdirSync } from 'node:fs';
+import { createHash } from 'node:crypto';
+import { copyFileSync, lstatSync, mkdirSync, readFileSync, readdirSync } from 'node:fs';
 import { basename, relative, resolve } from 'node:path';
 const EXCLUDED_DIRECTORY_NAMES = new Set(['.git', '.eap', 'node_modules', 'coverage']);
 export function copyResourceDirectory(source, destination) {
@@ -8,6 +9,15 @@ export function copyResourceDirectory(source, destination) {
     }
     copyDirectory(source, destination, source);
 }
+export function resourceDirectoryDigest(source) {
+    const sourceStat = lstatSync(source);
+    if (!sourceStat.isDirectory() || sourceStat.isSymbolicLink()) {
+        throw new Error(`Resource source must be a regular directory: ${source}`);
+    }
+    const hash = createHash('sha256');
+    digestDirectory(source, source, hash);
+    return hash.digest('hex');
+}
 function copyDirectory(source, destination, root) {
     const stat = lstatSync(source);
     if (!stat.isDirectory() || stat.isSymbolicLink()) {
@@ -31,7 +41,34 @@ function copyDirectory(source, destination, root) {
         copyFileSync(sourcePath, targetPath);
     }
 }
+function digestDirectory(source, root, hash) {
+    const stat = lstatSync(source);
+    if (!stat.isDirectory() || stat.isSymbolicLink()) {
+        throw new Error(`Resource path must be a regular directory: ${source}`);
+    }
+    const directoryPath = relative(root, source).replace(/\\/g, '/');
+    hash.update(`directory:${directoryPath}\0`);
+    for (const entry of readdirSync(source, { withFileTypes: true }).sort((left, right) => left.name.localeCompare(right.name))) {
+        if (shouldExclude(entry.name, entry.isDirectory()))
+            continue;
+        const sourcePath = resolve(source, entry.name);
+        assertDescendant(root, sourcePath);
+        if (entry.isSymbolicLink())
+            throw new Error(`Resource directory must not contain symbolic links: ${sourcePath}`);
+        if (entry.isDirectory()) {
+            digestDirectory(sourcePath, root, hash);
+            continue;
+        }
+        if (!entry.isFile())
+            throw new Error(`Resource directory contains an unsupported entry: ${sourcePath}`);
+        hash.update(`file:${relative(root, sourcePath).replace(/\\/g, '/')}\0`);
+        hash.update(readFileSync(sourcePath));
+        hash.update('\0');
+    }
+}
 function shouldExclude(name, isDirectory) {
+    if (name === '.ready')
+        return true;
     if (name === '.env' || name.startsWith('.env.'))
         return true;
     if (name.endsWith('.tmp') || name.startsWith('.tmp'))

package/dist/materialization/copy-resource-directory.js.map

@@ -1 +1 @@
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package/dist/materialization/index.d.ts

@@ -1,5 +1,5 @@
 export * from './types.js';
 export * from './copy-resource-directory.js';
 export * from './prepare-agent-runtime.js';
-export * from './sync-author-resources.js';
+export * from './load-agent-runtime.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/materialization/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/materialization/index.ts"],"names":[],"mappings":"AAAA,cAAc,YAAY,CAAC;AAC3B,cAAc,8BAA8B,CAAC;AAC7C,cAAc,4BAA4B,CAAC;AAC3C,cAAc,4BAA4B,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/materialization/index.ts"],"names":[],"mappings":"AAAA,cAAc,YAAY,CAAC;AAC3B,cAAc,8BAA8B,CAAC;AAC7C,cAAc,4BAA4B,CAAC;AAC3C,cAAc,yBAAyB,CAAC"}

package/dist/materialization/index.js

@@ -1,5 +1,5 @@
 export * from './types.js';
 export * from './copy-resource-directory.js';
 export * from './prepare-agent-runtime.js';
-export * from './sync-author-resources.js';
+export * from './load-agent-runtime.js';
 //# sourceMappingURL=index.js.map

package/dist/materialization/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/materialization/index.ts"],"names":[],"mappings":"AAAA,cAAc,YAAY,CAAC;AAC3B,cAAc,8BAA8B,CAAC;AAC7C,cAAc,4BAA4B,CAAC;AAC3C,cAAc,4BAA4B,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/materialization/index.ts"],"names":[],"mappings":"AAAA,cAAc,YAAY,CAAC;AAC3B,cAAc,8BAA8B,CAAC;AAC7C,cAAc,4BAA4B,CAAC;AAC3C,cAAc,yBAAyB,CAAC"}

package/dist/materialization/load-agent-runtime.d.ts

@@ -0,0 +1,19 @@
+import { type LoadedProjectRuntimeConfig } from '../config/index.js';
+import { type EapLock } from '../schema/index.js';
+import type { PreparedAgentRuntime } from './types.js';
+export interface LoadAgentRuntimeOptions {
+    runtimeRoot?: string;
+    agentCode?: string;
+    version?: string;
+}
+export interface LoadedAgentRuntime extends PreparedAgentRuntime {
+    manifestPath: string;
+    graphPath: string;
+    configPath: string;
+    lockPath: string;
+    config: LoadedProjectRuntimeConfig['config'];
+    lock: EapLock;
+}
+/** Loads and verifies the immutable project inputs in a materialized Runtime tree. */
+export declare function loadAgentRuntime(options?: LoadAgentRuntimeOptions): LoadedAgentRuntime;
+//# sourceMappingURL=load-agent-runtime.d.ts.map

package/dist/materialization/load-agent-runtime.d.ts.map

@@ -0,0 +1 @@
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package/dist/materialization/load-agent-runtime.js

@@ -0,0 +1,128 @@
+import { lstatSync, readFileSync, readdirSync } from 'node:fs';
+import { resolve } from 'node:path';
+import { loadProjectRuntimeConfig } from '../config/index.js';
+import { toSha256Hex } from '../digest.js';
+import { readEapLock } from '../lockfile/index.js';
+import { sha256 } from '../resources/resource-files.js';
+import { AgentManifestSchema, DependenciesLockSchema, GraphSchema, } from '../schema/index.js';
+import { resolveAgentRuntimeRoot } from './prepare-agent-runtime.js';
+const REQUIRED_RUNTIME_ARTIFACTS = [
+    'agent.manifest.json',
+    'graph.json',
+    'eap.config.json',
+    'eap.lock.yaml',
+    'dependencies.lock',
+];
+/** Loads and verifies the immutable project inputs in a materialized Runtime tree. */
+export function loadAgentRuntime(options = {}) {
+    const runtimeRoot = assertRegularDirectory(resolveAgentRuntimeRoot({ runtimeRoot: options.runtimeRoot }), 'Runtime root');
+    const agentsRoot = assertRegularDirectory(resolve(runtimeRoot, 'agents'), 'Runtime agents directory');
+    const agentCode = options.agentCode ?? selectOnlyDirectory(agentsRoot, 'Agent code');
+    assertDirectorySegment(agentCode, 'Agent code');
+    const agentRoot = assertRegularDirectory(resolve(agentsRoot, agentCode), `Agent directory ${agentCode}`);
+    const version = options.version ?? selectOnlyDirectory(agentRoot, 'Agent version');
+    assertDirectorySegment(version, 'Agent version');
+    const agentDir = assertRegularDirectory(resolve(agentRoot, version), `Agent version directory ${agentCode}@${version}`);
+    const artifactPaths = new Map(REQUIRED_RUNTIME_ARTIFACTS.map((name) => [
+        name,
+        assertRegularFile(resolve(agentDir, name), `Runtime ${name}`),
+    ]));
+    assertRegularFile(resolve(agentDir, 'snapshot.json'), 'Runtime snapshot');
+    assertRegularFile(resolve(agentDir, '.ready'), 'Runtime readiness marker');
+    const manifestPath = artifactPaths.get('agent.manifest.json');
+    const graphPath = artifactPaths.get('graph.json');
+    const configPath = artifactPaths.get('eap.config.json');
+    const lockPath = artifactPaths.get('eap.lock.yaml');
+    const manifest = AgentManifestSchema.parse(readJson(manifestPath, 'Runtime Agent manifest'));
+    if (manifest.code !== agentCode || manifest.version !== version) {
+        throw new Error(`Runtime Agent identity does not match ${agentCode}@${version}`);
+    }
+    GraphSchema.parse(readJson(graphPath, 'Runtime Graph'));
+    const dependencies = DependenciesLockSchema.parse(readJson(artifactPaths.get('dependencies.lock'), 'Runtime dependencies lock'));
+    if (dependencies.agentCode && dependencies.agentCode !== agentCode) {
+        throw new Error(`Runtime dependencies.lock Agent identity does not match ${agentCode}`);
+    }
+    if (dependencies.agentVersion && dependencies.agentVersion !== version) {
+        throw new Error(`Runtime dependencies.lock version does not match ${version}`);
+    }
+    const loadedConfig = loadProjectRuntimeConfig({ root: agentDir });
+    const lock = readEapLock(agentDir);
+    if (!lock)
+        throw new Error(`Runtime eap.lock.yaml is missing: ${lockPath}`);
+    verifySnapshotArtifacts(agentDir, artifactPaths);
+    return {
+        projectRoot: runtimeRoot,
+        runtimeRoot,
+        agentDir,
+        agentCode,
+        version,
+        resources: [],
+        manifestPath,
+        graphPath,
+        configPath,
+        lockPath,
+        config: loadedConfig.config,
+        lock,
+    };
+}
+function verifySnapshotArtifacts(agentDir, artifactPaths) {
+    const snapshot = readJson(resolve(agentDir, 'snapshot.json'), 'Runtime snapshot');
+    if (!Array.isArray(snapshot.artifacts))
+        throw new Error('Runtime snapshot artifacts are invalid');
+    const digests = new Map(snapshot.artifacts
+        .filter((artifact) => (typeof artifact.path === 'string' && typeof artifact.sha256 === 'string'))
+        .map((artifact) => [artifact.path, artifact.sha256]));
+    for (const [name, path] of artifactPaths) {
+        const expected = toSha256Hex(sha256(readFileSync(path)));
+        if (digests.get(name) !== expected) {
+            throw new Error(`Runtime snapshot digest does not match ${name}`);
+        }
+    }
+}
+function selectOnlyDirectory(parent, label) {
+    const directories = readdirSync(parent, { withFileTypes: true })
+        .filter((entry) => entry.isDirectory())
+        .map((entry) => entry.name)
+        .sort((left, right) => left.localeCompare(right));
+    if (directories.length !== 1)
+        throw new Error(`Runtime requires exactly one ${label}; found ${directories.length}`);
+    return directories[0];
+}
+function assertRegularDirectory(path, label) {
+    let stat;
+    try {
+        stat = lstatSync(path);
+    }
+    catch {
+        throw new Error(`${label} is missing: ${path}`);
+    }
+    if (!stat.isDirectory() || stat.isSymbolicLink())
+        throw new Error(`${label} must be a regular directory: ${path}`);
+    return path;
+}
+function assertRegularFile(path, label) {
+    let stat;
+    try {
+        stat = lstatSync(path);
+    }
+    catch {
+        throw new Error(`${label} is missing: ${path}`);
+    }
+    if (!stat.isFile() || stat.isSymbolicLink())
+        throw new Error(`${label} must be a regular file: ${path}`);
+    return path;
+}
+function assertDirectorySegment(value, label) {
+    if (!value || value === '.' || value === '..' || /[\\/]/.test(value))
+        throw new Error(`${label} is not valid: ${value}`);
+}
+function readJson(path, label) {
+    try {
+        return JSON.parse(readFileSync(path, 'utf8'));
+    }
+    catch (error) {
+        const reason = error instanceof Error ? error.message : String(error);
+        throw new Error(`${label} is not valid JSON: ${path} (${reason})`);
+    }
+}
+//# sourceMappingURL=load-agent-runtime.js.map

package/dist/materialization/load-agent-runtime.js.map

@@ -0,0 +1 @@
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package/dist/materialization/prepare-agent-runtime.d.ts

@@ -1,3 +1,9 @@
 import type { PrepareAgentRuntimeOptions, PreparedAgentRuntime } from './types.js';
 export declare function prepareAgentRuntime(options?: PrepareAgentRuntimeOptions): Promise<PreparedAgentRuntime>;
+export declare function resolveAgentRuntimeRoot(options?: {
+    root?: string;
+    runtimeRoot?: string;
+    env?: NodeJS.ProcessEnv;
+    cwd?: string;
+}): string;
 //# sourceMappingURL=prepare-agent-runtime.d.ts.map

package/dist/materialization/prepare-agent-runtime.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"prepare-agent-runtime.d.ts","sourceRoot":"","sources":["../../src/materialization/prepare-agent-runtime.ts"],"names":[],"mappings":"AAuBA,OAAO,KAAK,EAAE,0BAA0B,EAAE,oBAAoB,EAAE,MAAM,YAAY,CAAC;AAiCnF,wBAAsB,mBAAmB,CACvC,OAAO,GAAE,0BAA+B,GACvC,OAAO,CAAC,oBAAoB,CAAC,CA6E/B;AAkGD,wBAAgB,uBAAuB,CAAC,OAAO,GAAE;IAC/C,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;IACxB,GAAG,CAAC,EAAE,MAAM,CAAC;CACT,GAAG,MAAM,CAKd"}

package/dist/materialization/prepare-agent-runtime.js

@@ -2,26 +2,44 @@ import { randomUUID } from 'node:crypto';
 import { copyFileSync, existsSync, lstatSync, readFileSync, renameSync, writeFileSync } from 'node:fs';
 import { dirname, relative, resolve, sep } from 'node:path';
 import { toSha256Hex } from '../digest.js';
+import { loadProjectRuntimeConfig } from '../config/index.js';
 import { resolveAgentProject } from '../discovery/index.js';
 import { readEapLock, resolveLockedResources } from '../lockfile/index.js';
 import { validateAgentProject } from '../validation/index.js';
 import { DependenciesLockSchema } from '../schema/index.js';
+import { configuredLocalResourceCodes, discoverConfiguredLocalResources, } from '../resources/configured-local-resources.js';
 import { ensureGeneratedDirectory, ensureGeneratedDirectoryPath, removeDirectoryChild, sha256, validateDirectoryChild, } from '../resources/resource-files.js';
-import { copyResourceDirectory } from './copy-resource-directory.js';
+import { copyResourceDirectory, resourceDirectoryDigest } from './copy-resource-directory.js';
+const RUNTIME_SOURCE_ARTIFACTS = [
+    'agent.manifest.json',
+    'graph.json',
+    'eap.config.json',
+    'eap.lock.yaml',
+];
 export async function prepareAgentRuntime(options = {}) {
     const project = resolveAgentProject(options.root ? { root: options.root } : {});
-    const mode = options.mode ?? 'development';
-    const destination = resolveRuntimeDestination(project.root, mode, options.outputRoot);
+    const destination = resolveRuntimeDestination(project.root, options.outputRoot);
     const validation = validateAgentProject(project.root);
     if (!validation.valid || !validation.agent) {
         const message = validation.issues.map((issue) => issue.message).join('; ');
         throw new Error(`Cannot prepare Agent Runtime: ${message}. Run eap install to restore missing remote resources.`);
     }
     const lock = readEapLock(project.root);
-    const resources = lock ? resolveLockedResources({ root: project.root, manifest: validation.agent.manifest, lock }) : [];
-    const includeDigests = mode !== 'development';
+    if (!lock) {
+        throw new Error('Cannot prepare Agent Runtime: eap.lock.yaml is required. Run eap install to create it.');
+    }
+    const config = loadProjectRuntimeConfig({ root: project.root }).config;
+    const configuredLocalResources = discoverConfiguredLocalResources(project.root, config);
+    const resources = resolveLockedResources({
+        root: project.root,
+        manifest: validation.agent.manifest,
+        lock,
+        availableLocalResources: configuredLocalResourceCodes(configuredLocalResources),
+    });
+    const runtimeResources = mergeRuntimeResources(resources, configuredLocalResources, validation.agent.manifest);
+    const includeDigests = true;
     // Avoid replacing an unchanged Runtime directory that another Windows process may still hold.
-    if (canReuseRuntime(destination.runtimeRoot, project, resources, includeDigests)) {
+    if (canReuseRuntime(destination.runtimeRoot, project, runtimeResources, includeDigests)) {
         const reused = {
             projectRoot: project.root,
             runtimeRoot: destination.runtimeRoot,
@@ -41,9 +59,10 @@ export async function prepareAgentRuntime(options = {}) {
     const temporaryRoot = ensureGeneratedDirectoryPath(destination.runtimeParent, [temporaryName]);
     try {
         const agentDir = ensureGeneratedDirectoryPath(temporaryRoot, ['agents', project.agentCode, project.version]);
-        copyRegularFile(project.manifestPath, resolve(agentDir, 'agent.manifest.json'));
-        copyRegularFile(project.graphPath, resolve(agentDir, 'graph.json'));
-        const snapshot = materializeResources(agentDir, resources, project.agentCode, project.version, includeDigests);
+        for (const artifact of RUNTIME_SOURCE_ARTIFACTS) {
+            copyRegularFile(resolve(project.root, artifact), resolve(agentDir, artifact));
+        }
+        const snapshot = materializeResources(agentDir, runtimeResources, project.agentCode, project.version, includeDigests);
         writeFileSync(resolve(agentDir, 'snapshot.json'), `${JSON.stringify(snapshot, null, 2)}\n`, 'utf8');
         writeFileSync(resolve(agentDir, '.ready'), '', 'utf8');
         syncAssemblyDocument(project.root, agentDir);
@@ -76,18 +95,20 @@ function canReuseRuntime(runtimeRoot, project, resources, includeDigests) {
         const snapshot = JSON.parse(readFileSync(snapshotPath, 'utf8'));
         if (snapshot.version !== project.version)
             return false;
-        const sourceManifestDigest = sha256(readFileSync(project.manifestPath));
-        const sourceGraphDigest = sha256(readFileSync(project.graphPath));
-        if (sha256(readFileSync(resolve(agentDir, 'agent.manifest.json'))) !== sourceManifestDigest)
-            return false;
-        if (sha256(readFileSync(resolve(agentDir, 'graph.json'))) !== sourceGraphDigest)
-            return false;
+        const sourceArtifactDigests = new Map();
+        for (const artifact of RUNTIME_SOURCE_ARTIFACTS) {
+            const sourceDigest = sha256(readFileSync(resolve(project.root, artifact)));
+            sourceArtifactDigests.set(artifact, sourceDigest);
+            if (sha256(readFileSync(resolve(agentDir, artifact))) !== sourceDigest)
+                return false;
+        }
         const expectedTools = resources
             .filter((resource) => resource.kind === 'tools')
             .map((resource) => ({
             name: resource.code,
             version: resource.version,
             ...(includeDigests ? { sha256: toSha256Hex(sha256(readFileSync(resolve(resource.sourcePath, resource.manifestFile)))) } : {}),
+            ...(includeDigests ? { contentSha256: resourceDirectoryDigest(resource.sourcePath) } : {}),
         }))
             .sort((left, right) => left.name.localeCompare(right.name) || left.version.localeCompare(right.version));
         const expectedSkills = resources
@@ -96,6 +117,7 @@ function canReuseRuntime(runtimeRoot, project, resources, includeDigests) {
             skillId: resource.code,
             version: resource.version,
             ...(includeDigests ? { sha256: toSha256Hex(sha256(readFileSync(resolve(resource.sourcePath, resource.manifestFile)))) } : {}),
+            ...(includeDigests ? { contentSha256: resourceDirectoryDigest(resource.sourcePath) } : {}),
         }))
             .sort((left, right) => left.skillId.localeCompare(right.skillId) || left.version.localeCompare(right.version));
         if (JSON.stringify(snapshot.tools ?? []) !== JSON.stringify(expectedTools))
@@ -103,24 +125,33 @@ function canReuseRuntime(runtimeRoot, project, resources, includeDigests) {
         if (JSON.stringify(snapshot.skills ?? []) !== JSON.stringify(expectedSkills))
             return false;
         const artifacts = new Map((snapshot.artifacts ?? []).map((artifact) => [artifact.path, artifact.sha256]));
-        if (artifacts.get('agent.manifest.json') !== toSha256Hex(sourceManifestDigest))
-            return false;
-        if (artifacts.get('graph.json') !== toSha256Hex(sourceGraphDigest))
-            return false;
+        for (const artifact of RUNTIME_SOURCE_ARTIFACTS) {
+            if (artifacts.get(artifact) !== toSha256Hex(sourceArtifactDigests.get(artifact)))
+                return false;
+        }
         const dependenciesPath = resolve(agentDir, 'dependencies.lock');
         if (!existsSync(dependenciesPath))
             return false;
         if (artifacts.get('dependencies.lock') !== toSha256Hex(sha256(readFileSync(dependenciesPath))))
             return false;
         for (const resource of resources) {
-            const manifestPath = resolve(resolveMaterializedResourceDirectory(agentDir, resource), resource.manifestFile);
+            const materializedDirectory = resolveMaterializedResourceDirectory(agentDir, resource);
+            const manifestPath = resolve(materializedDirectory, resource.manifestFile);
             if (!existsSync(manifestPath))
                 return false;
             if (includeDigests) {
                 const expectedDigest = toSha256Hex(sha256(readFileSync(manifestPath)));
+                const sourceContentDigest = resourceDirectoryDigest(resource.sourcePath);
+                const materializedContentDigest = resourceDirectoryDigest(materializedDirectory);
                 const matches = resource.kind === 'tools'
-                    ? (snapshot.tools ?? []).some((item) => item.name === resource.code && item.sha256 === expectedDigest)
-                    : (snapshot.skills ?? []).some((item) => item.skillId === resource.code && item.sha256 === expectedDigest);
+                    ? (snapshot.tools ?? []).some((item) => (item.name === resource.code
+                        && item.sha256 === expectedDigest
+                        && item.contentSha256 === sourceContentDigest
+                        && item.contentSha256 === materializedContentDigest))
+                    : (snapshot.skills ?? []).some((item) => (item.skillId === resource.code
+                        && item.sha256 === expectedDigest
+                        && item.contentSha256 === sourceContentDigest
+                        && item.contentSha256 === materializedContentDigest));
                 if (!matches)
                     return false;
             }
@@ -131,20 +162,15 @@ function canReuseRuntime(runtimeRoot, project, resources, includeDigests) {
         return false;
     }
 }
-function resolveRuntimeDestination(projectRoot, mode, outputRoot) {
-    const generatedRoot = ensureGeneratedDirectory(projectRoot);
-    if (mode === 'development') {
-        return resolveRuntimeDestinationWithin(generatedRoot, resolve(outputRoot ?? resolve(generatedRoot, 'runtime')), 'Development Runtime output');
-    }
-    if (mode === 'standalone') {
-        if (!outputRoot)
-            throw new Error('Standalone Runtime output root is required');
-        return resolveRuntimeDestinationWithin(projectRoot, resolve(outputRoot), 'Standalone Runtime output');
-    }
-    if (!outputRoot)
-        throw new Error('Package Runtime output root is required');
-    const stagingRoot = ensureGeneratedDirectoryPath(projectRoot, ['.eap', 'package-staging']);
-    return resolveRuntimeDestinationWithin(stagingRoot, resolve(outputRoot), 'Package Runtime output');
+function resolveRuntimeDestination(projectRoot, outputRoot) {
+    ensureGeneratedDirectory(projectRoot);
+    return resolveRuntimeDestinationWithin(projectRoot, resolveAgentRuntimeRoot({ root: projectRoot, runtimeRoot: outputRoot }), 'Runtime output');
+}
+export function resolveAgentRuntimeRoot(options = {}) {
+    const env = options.env ?? process.env;
+    const configured = options.runtimeRoot ?? env.EAP_RUNTIME_ROOT;
+    const base = options.cwd ?? options.root ?? process.cwd();
+    return resolve(base, configured && configured.trim() ? configured : 'dist/.eap/runtime');
 }
 function resolveRuntimeDestinationWithin(allowedRoot, requestedRoot, label) {
     const realAllowedRoot = ensureGeneratedDirectoryPath(allowedRoot, []);
@@ -211,27 +237,39 @@ function materializeResources(agentDir, resources, agentCode, version, includeDi
             throw new Error(`Materialized ${resource.kind.slice(0, -1)} entry file is missing: ${resource.code}`);
         }
         const destinationDigest = includeDigests ? sha256(readFileSync(destinationManifestPath)) : undefined;
+        const contentSha256 = includeDigests ? resourceDirectoryDigest(destination) : undefined;
         writeFileSync(resolve(destination, '.ready'), '', 'utf8');
         const digest = destinationDigest ? toSha256Hex(destinationDigest) : undefined;
-        if (resource.kind === 'tools')
-            tools.push({ name: resource.code, version: resource.version, ...(digest ? { sha256: digest } : {}) });
-        else
-            skills.push({ skillId: resource.code, version: resource.version, ...(digest ? { sha256: digest } : {}) });
+        if (resource.kind === 'tools') {
+            tools.push({
+                name: resource.code,
+                version: resource.version,
+                ...(digest ? { sha256: digest } : {}),
+                ...(contentSha256 ? { contentSha256 } : {}),
+            });
+        }
+        else {
+            skills.push({
+                skillId: resource.code,
+                version: resource.version,
+                ...(digest ? { sha256: digest } : {}),
+                ...(contentSha256 ? { contentSha256 } : {}),
+            });
+        }
     }
-    const manifestPath = resolve(agentDir, 'agent.manifest.json');
-    const graphPath = resolve(agentDir, 'graph.json');
+    const lockableResources = resources.filter((resource) => isDependenciesLockCode(resource.code));
     const dependenciesLock = DependenciesLockSchema.parse({
         lockVersion: 1,
         agentCode,
         agentVersion: version,
-        toolRefs: resources
+        toolRefs: lockableResources
             .filter((resource) => resource.kind === 'tools')
             .map((resource) => ({
             code: resource.code,
             version: resource.version,
             ...(includeDigests ? { sha256: toSha256Hex(sha256(readFileSync(resolve(resource.sourcePath, resource.manifestFile)))) } : {}),
         })),
-        skillRefs: resources
+        skillRefs: lockableResources
             .filter((resource) => resource.kind === 'skills')
             .map((resource) => ({
             code: resource.code,
@@ -246,8 +284,10 @@ function materializeResources(agentDir, resources, agentCode, version, includeDi
         tools: tools.sort((left, right) => left.name.localeCompare(right.name) || left.version.localeCompare(right.version)),
         skills: skills.sort((left, right) => left.skillId.localeCompare(right.skillId) || left.version.localeCompare(right.version)),
         artifacts: [
-            { path: 'agent.manifest.json', sha256: toSha256Hex(sha256(readFileSync(manifestPath))) },
-            { path: 'graph.json', sha256: toSha256Hex(sha256(readFileSync(graphPath))) },
+            ...RUNTIME_SOURCE_ARTIFACTS.map((path) => ({
+                path,
+                sha256: toSha256Hex(sha256(readFileSync(resolve(agentDir, path)))),
+            })),
             { path: 'dependencies.lock', sha256: toSha256Hex(sha256(readFileSync(dependenciesPath))) },
         ],
     };
@@ -258,6 +298,28 @@ function resolveMaterializedResourceDirectory(agentDir, resource) {
 function materializedResourceDirectorySegments(resource) {
     return ['preinstall', resource.kind, resource.code];
 }
+function mergeRuntimeResources(lockedResources, configuredResources, manifest) {
+    const merged = new Map();
+    for (const resource of lockedResources) {
+        merged.set(`${resource.kind}:${resource.code}`, resource);
+    }
+    const versions = new Map([
+        ...manifest.toolRefs.map((ref) => [`tools:${ref.code}`, ref.version]),
+        ...manifest.skillRefs.map((ref) => [`skills:${ref.code}`, ref.version]),
+    ]);
+    for (const resource of configuredResources) {
+        merged.set(`${resource.kind}:${resource.code}`, {
+            ...resource,
+            version: versions.get(`${resource.kind}:${resource.code}`) ?? '1.0.0',
+        });
+    }
+    return [...merged.values()].sort((left, right) => (left.kind.localeCompare(right.kind)
+        || left.code.localeCompare(right.code)
+        || left.version.localeCompare(right.version)));
+}
+function isDependenciesLockCode(value) {
+    return value.length <= 64 && /^[a-z0-9][a-z0-9_-]*$/.test(value);
+}
 function syncAssemblyDocument(projectRoot, agentDir) {
     const source = resolve(projectRoot, 'assembly.json');
     if (!existsSync(source) || !lstatSync(source).isFile())