@graphty/webgpu-graph-algorithms 0.6.5 → 0.6.7

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Files changed (147) hide show
  1. package/README.md +38 -17
  2. package/dist/browser.js +1 -1
  3. package/dist/chunks/{context-hzGggHeM.js → context-Cezi7qpi.js} +46 -22
  4. package/dist/chunks/context-Cezi7qpi.js.map +1 -0
  5. package/dist/node.js +19 -11
  6. package/dist/node.js.map +1 -1
  7. package/dist/src/algorithms/bfs.d.ts +10 -6
  8. package/dist/src/algorithms/bfs.d.ts.map +1 -1
  9. package/dist/src/algorithms/bfs.js +32 -9
  10. package/dist/src/algorithms/bfs.js.map +1 -1
  11. package/dist/src/algorithms/pagerank.d.ts.map +1 -1
  12. package/dist/src/algorithms/pagerank.js +19 -5
  13. package/dist/src/algorithms/pagerank.js.map +1 -1
  14. package/dist/src/algorithms/power-iteration.d.ts.map +1 -1
  15. package/dist/src/algorithms/power-iteration.js +8 -2
  16. package/dist/src/algorithms/power-iteration.js.map +1 -1
  17. package/dist/src/constants.d.ts +33 -0
  18. package/dist/src/constants.d.ts.map +1 -1
  19. package/dist/src/constants.js +33 -0
  20. package/dist/src/constants.js.map +1 -1
  21. package/dist/src/kernel/dispatch.d.ts +2 -2
  22. package/dist/src/kernel/dispatch.d.ts.map +1 -1
  23. package/dist/src/kernel/kernel.d.ts +1 -1
  24. package/dist/src/kernel/kernel.js +2 -2
  25. package/dist/src/kernel/kernel.js.map +1 -1
  26. package/dist/src/kernel/prelude.d.ts.map +1 -1
  27. package/dist/src/kernel/prelude.js +2 -1
  28. package/dist/src/kernel/prelude.js.map +1 -1
  29. package/dist/src/kernels.d.ts +10 -7
  30. package/dist/src/kernels.d.ts.map +1 -1
  31. package/dist/src/kernels.js +33 -9
  32. package/dist/src/kernels.js.map +1 -1
  33. package/dist/src/layouts/forceatlas2.d.ts.map +1 -1
  34. package/dist/src/layouts/forceatlas2.js +2 -1
  35. package/dist/src/layouts/forceatlas2.js.map +1 -1
  36. package/dist/src/layouts/fruchterman-reingold.d.ts.map +1 -1
  37. package/dist/src/layouts/fruchterman-reingold.js +4 -2
  38. package/dist/src/layouts/fruchterman-reingold.js.map +1 -1
  39. package/dist/src/layouts/repulsion-exact.d.ts +16 -0
  40. package/dist/src/layouts/repulsion-exact.d.ts.map +1 -1
  41. package/dist/src/layouts/repulsion-exact.js +21 -1
  42. package/dist/src/layouts/repulsion-exact.js.map +1 -1
  43. package/dist/src/layouts/repulsion-grid.d.ts +1 -1
  44. package/dist/src/layouts/repulsion-grid.js +1 -1
  45. package/dist/src/layouts/spring-electrical.d.ts.map +1 -1
  46. package/dist/src/layouts/spring-electrical.js +6 -2
  47. package/dist/src/layouts/spring-electrical.js.map +1 -1
  48. package/dist/src/memory/residency.js +14 -4
  49. package/dist/src/memory/residency.js.map +1 -1
  50. package/dist/src/node/index.d.ts +13 -8
  51. package/dist/src/node/index.d.ts.map +1 -1
  52. package/dist/src/node/index.js +36 -17
  53. package/dist/src/node/index.js.map +1 -1
  54. package/dist/src/primitives/frontier.d.ts +1 -0
  55. package/dist/src/primitives/frontier.d.ts.map +1 -1
  56. package/dist/src/primitives/frontier.js +1 -0
  57. package/dist/src/primitives/frontier.js.map +1 -1
  58. package/dist/src/primitives/grid-pyramid.d.ts +4 -4
  59. package/dist/src/primitives/grid-pyramid.d.ts.map +1 -1
  60. package/dist/src/primitives/grid-pyramid.js +4 -3
  61. package/dist/src/primitives/grid-pyramid.js.map +1 -1
  62. package/dist/src/primitives/grid.d.ts +13 -10
  63. package/dist/src/primitives/grid.d.ts.map +1 -1
  64. package/dist/src/primitives/grid.js +10 -7
  65. package/dist/src/primitives/grid.js.map +1 -1
  66. package/dist/src/wgsl/advance-expand.wgsl.d.ts +4 -3
  67. package/dist/src/wgsl/advance-expand.wgsl.d.ts.map +1 -1
  68. package/dist/src/wgsl/advance-expand.wgsl.js +4 -3
  69. package/dist/src/wgsl/advance-expand.wgsl.js.map +1 -1
  70. package/dist/src/wgsl/bfs-bottom-up.wgsl.d.ts +4 -3
  71. package/dist/src/wgsl/bfs-bottom-up.wgsl.d.ts.map +1 -1
  72. package/dist/src/wgsl/bfs-bottom-up.wgsl.js +4 -3
  73. package/dist/src/wgsl/bfs-bottom-up.wgsl.js.map +1 -1
  74. package/dist/src/wgsl/bfs-fused.wgsl.d.ts +6 -6
  75. package/dist/src/wgsl/bfs-fused.wgsl.d.ts.map +1 -1
  76. package/dist/src/wgsl/bfs-fused.wgsl.js +6 -6
  77. package/dist/src/wgsl/bfs-next-degree.wgsl.d.ts +23 -0
  78. package/dist/src/wgsl/bfs-next-degree.wgsl.d.ts.map +1 -0
  79. package/dist/src/wgsl/bfs-next-degree.wgsl.js +34 -0
  80. package/dist/src/wgsl/bfs-next-degree.wgsl.js.map +1 -0
  81. package/dist/src/wgsl/fa2-repulsion-exact.wgsl.d.ts +4 -1
  82. package/dist/src/wgsl/fa2-repulsion-exact.wgsl.d.ts.map +1 -1
  83. package/dist/src/wgsl/fa2-repulsion-exact.wgsl.js +18 -2
  84. package/dist/src/wgsl/fa2-repulsion-exact.wgsl.js.map +1 -1
  85. package/dist/src/wgsl/fa2-stats-finalize.wgsl.d.ts +1 -1
  86. package/dist/src/wgsl/fa2-stats-finalize.wgsl.d.ts.map +1 -1
  87. package/dist/src/wgsl/fa2-stats-finalize.wgsl.js +4 -2
  88. package/dist/src/wgsl/fa2-stats-finalize.wgsl.js.map +1 -1
  89. package/dist/src/wgsl/frontier-finalize.wgsl.d.ts +21 -20
  90. package/dist/src/wgsl/frontier-finalize.wgsl.d.ts.map +1 -1
  91. package/dist/src/wgsl/frontier-finalize.wgsl.js +26 -25
  92. package/dist/src/wgsl/frontier-finalize.wgsl.js.map +1 -1
  93. package/dist/src/wgsl/grid-cell-key.wgsl.d.ts +3 -2
  94. package/dist/src/wgsl/grid-cell-key.wgsl.d.ts.map +1 -1
  95. package/dist/src/wgsl/grid-cell-key.wgsl.js +4 -2
  96. package/dist/src/wgsl/grid-cell-key.wgsl.js.map +1 -1
  97. package/dist/src/wgsl/grid-centroid.wgsl.d.ts +3 -2
  98. package/dist/src/wgsl/grid-centroid.wgsl.d.ts.map +1 -1
  99. package/dist/src/wgsl/grid-centroid.wgsl.js +3 -2
  100. package/dist/src/wgsl/grid-centroid.wgsl.js.map +1 -1
  101. package/dist/src/wgsl/grid-downsample.wgsl.d.ts +1 -1
  102. package/dist/src/wgsl/grid-downsample.wgsl.js +1 -1
  103. package/dist/src/wgsl/grid-far-field.wgsl.d.ts +6 -4
  104. package/dist/src/wgsl/grid-far-field.wgsl.d.ts.map +1 -1
  105. package/dist/src/wgsl/grid-far-field.wgsl.js +15 -8
  106. package/dist/src/wgsl/grid-far-field.wgsl.js.map +1 -1
  107. package/dist/src/wgsl/grid-near-field.wgsl.d.ts +2 -2
  108. package/dist/src/wgsl/grid-near-field.wgsl.d.ts.map +1 -1
  109. package/dist/src/wgsl/grid-near-field.wgsl.js +6 -2
  110. package/dist/src/wgsl/grid-near-field.wgsl.js.map +1 -1
  111. package/dist/src/wgsl/histogram.wgsl.d.ts +1 -1
  112. package/dist/src/wgsl/histogram.wgsl.js +1 -1
  113. package/dist/webgpu-graph-algorithms.js +144 -45
  114. package/dist/webgpu-graph-algorithms.js.map +1 -1
  115. package/package.json +3 -3
  116. package/src/algorithms/bfs.ts +33 -9
  117. package/src/algorithms/pagerank.ts +19 -5
  118. package/src/algorithms/power-iteration.ts +8 -2
  119. package/src/constants.ts +35 -0
  120. package/src/kernel/dispatch.ts +2 -2
  121. package/src/kernel/kernel.ts +2 -2
  122. package/src/kernel/prelude.ts +2 -0
  123. package/src/kernels.ts +35 -9
  124. package/src/layouts/forceatlas2.ts +2 -0
  125. package/src/layouts/fruchterman-reingold.ts +4 -1
  126. package/src/layouts/repulsion-exact.ts +29 -1
  127. package/src/layouts/repulsion-grid.ts +1 -1
  128. package/src/layouts/spring-electrical.ts +8 -1
  129. package/src/memory/residency.ts +14 -4
  130. package/src/node/index.ts +42 -18
  131. package/src/primitives/frontier.ts +2 -0
  132. package/src/primitives/grid-pyramid.ts +6 -5
  133. package/src/primitives/grid.ts +17 -12
  134. package/src/wgsl/advance-expand.wgsl.ts +4 -3
  135. package/src/wgsl/bfs-bottom-up.wgsl.ts +4 -3
  136. package/src/wgsl/bfs-fused.wgsl.ts +6 -6
  137. package/src/wgsl/bfs-next-degree.wgsl.ts +33 -0
  138. package/src/wgsl/fa2-repulsion-exact.wgsl.ts +18 -2
  139. package/src/wgsl/fa2-stats-finalize.wgsl.ts +4 -2
  140. package/src/wgsl/frontier-finalize.wgsl.ts +26 -25
  141. package/src/wgsl/grid-cell-key.wgsl.ts +4 -2
  142. package/src/wgsl/grid-centroid.wgsl.ts +3 -2
  143. package/src/wgsl/grid-downsample.wgsl.ts +1 -1
  144. package/src/wgsl/grid-far-field.wgsl.ts +15 -8
  145. package/src/wgsl/grid-near-field.wgsl.ts +6 -2
  146. package/src/wgsl/histogram.wgsl.ts +1 -1
  147. package/dist/chunks/context-hzGggHeM.js.map +0 -1
@@ -2,9 +2,11 @@
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  * G6, the `grid-far-field` kernel body (spec 7.7; P4-T10; D24): per node `i = sortedIdx[t]`, its finest cell
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  * recomputed from `pos[i]` and the state (PD-10); for an inside node the coarsest level minus the 3x3 (3x3x3)
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  * around its coarsest cell, then at every finer level the 6x6 (6x6x6) block that is the parent's 3x3 minus this
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- * level's own 3x3 -- space tiled exactly once, no theta -- plus the outside pseudo-cell's centroid; for an outside
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- * node the coarsest level in full and no pseudo-cell. Every cell term is the per-cell law on the mass-weighted
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- * centroid (Gephi Region semantics), softened by `eps^2`: `LAW` 0 (FA2) `d * (k m_i M / d2)`, `LAW` 1 (FR, 7.20)
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+ * level's own 3x3 -- space tiled exactly once, no theta -- plus the centroid of each of the 2^dim outside
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+ * pseudo-cells, one per orthant about the grid centre (issue #90); for an outside node the coarsest level in full and
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+ * no pseudo-cell. Every cell term is the per-cell law on the mass-weighted
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+ * centroid (Gephi Region semantics), softened by `eps^2`: `LAW` 0 (FA2) `d * (k m_i M / d2)` with `|d|^2` first
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+ * floored at 0.01^2 like K3's pair law (issue #89), `LAW` 1 (FR, 7.20)
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  * `d * (k^2 M / d2)` (mass 1 per node, so `M` is the cell's count), `LAW` 2 (coulomb) `d * (-g m_i M / d2^1.5)`
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  * (P4-T13, PD-22). `force += f` (K2 wrote it). The loop bounds are `P.levels` and `P.gridMax` from the uniform,
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  * not a `LEVELS` override (PD-16, DEP-P4-G). Body only; normative text.
@@ -18,11 +20,12 @@ fn store_force(i: u32, f: vec3f) {
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  }
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  fn grid_cells() -> u32 { return P.gridMax * P.gridMax * select(1u, P.gridMax, P.dim == 3u); }
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  fn grid_side(level: u32) -> u32 { return P.gridMax >> level; }
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- fn level_base(level: u32) -> u32 { // the pyramid index of level L's cell 0 (level 0 carries the pseudo-cell at index cells)
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+ fn outside_cells() -> u32 { return select(4u, 8u, P.dim == 3u); } // one pseudo-cell per orthant (issue #90)
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+ fn level_base(level: u32) -> u32 { // the pyramid index of level L's cell 0 (level 0 carries the pseudo-cells at cells ..)
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  var base = 0u;
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  for (var l = 0u; l < level; l = l + 1u) {
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  let s = grid_side(l);
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- base = base + s * s * select(1u, s, P.dim == 3u) + select(0u, 1u, l == 0u);
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+ base = base + s * s * select(1u, s, P.dim == 3u) + select(0u, outside_cells(), l == 0u);
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  }
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  return base;
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  }
@@ -33,7 +36,9 @@ fn cell_at(level: u32, cx: i32, cy: i32, cz: i32) -> u32 {
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  fn cell_force(pi: vec4f, q: vec4f) -> vec3f { // one far-field term, softened by state.eps (7.7)
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  if (q.w <= 0.0) { return vec3f(0.0); } // an empty cell
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  let d = pi.xyz - q.xyz / q.w; // to the mass-weighted centroid
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- let d2 = dot(d, d) + S.eps * S.eps;
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+ var d2 = dot(d, d);
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+ if (LAW == 0u) { d2 = max(d2, FA2_DIST_FLOOR_SQ); } // FA2 alone floors d >= 0.01, as K3 and G7 do (issue #89); FR and coulomb are unfloored (7.20)
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+ d2 = d2 + S.eps * S.eps;
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  if (LAW == 1u) { return d * (P.frK * P.frK * q.w / d2); } // LAW 1 (FR, 7.20): k^2 / d per node, q.w nodes at the centroid
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  if (LAW == 2u) { return d * (-P.coulomb * pi.w * q.w / (d2 * sqrt(d2))); } // LAW 2 (coulomb): -g m_i M_cell / d^2
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  return d * (P.scalingRatio * pi.w * q.w / d2); // LAW 0 (FA2): |F| = k m_i M_cell / d
@@ -82,9 +87,11 @@ fn grid_far_field(@builtin(workgroup_id) wid: vec3<u32>, @builtin(local_invocati
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  }
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  }
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  }
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- f = f + cell_force(pi, pyramid[grid_cells()]); // the outside pseudo-cell as one far-field term
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+ for (var o = 0u; o < outside_cells(); o = o + 1u) { // every outside pseudo-cell: one far-field term per orthant
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+ f = f + cell_force(pi, pyramid[grid_cells() + o]);
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+ }
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  } else {
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- for (var cz = 0; cz <= zTop; cz = cz + 1) { // an outside node: the coarsest level in full, no pseudo-cell (it would include itself)
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+ for (var cz = 0; cz <= zTop; cz = cz + 1) { // an outside node: the coarsest level in full, no pseudo-cell (G7 sums them pair by pair)
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  for (var cy = 0; cy < ts; cy = cy + 1) {
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  for (var cx = 0; cx < ts; cx = cx + 1) {
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  f = f + cell_force(pi, pyramid[cell_at(top, cx, cy, cz)]);
@@ -3,7 +3,7 @@
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  * exact pair law of K3 (`LAW` 0: `|F| = k m_i m_j / d` with the 0.01 floor; `LAW` 1: FR's unfloored `k^2 / d`;
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  * `LAW` 2: the unfloored coulomb `-g m_i m_j / d^2`; the antisymmetric coincident kick at the law's magnitude at
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  * d = 0.01, PD-22) over the 9 (27) finest
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- * cells around its own, or over the outside pseudo-cell alone for an outside node; a cell above `nearMax` entries
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+ * cells around its own, or over the 2^dim outside pseudo-cells (one per orthant, issue #90) for an outside node; a cell above `nearMax` entries
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  * is sampled by `nearMax` INDEPENDENT draws with replacement, draw `k` reading the slot
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  * `lowbias32(((c ^ (iteration * 0x9E3779B9)) ^ seed) ^ (k * 0x85EBCA6B)) % count` (every slot's inclusion
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  * probability is `nearMax / count` whatever its position in the sorted order, so a duplicated draw is counted twice
@@ -103,7 +103,11 @@ fn grid_near_field(@builtin(workgroup_id) wid: vec3<u32>, @builtin(local_invocat
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  }
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  }
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  } else {
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- f = cell_sum(i, pi, grid_cells(), true); // an outside node: the pseudo-cell alone
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+ var own = grid_cells() + select(0u, 1u, c0.x >= g / 2) + select(0u, 2u, c0.y >= g / 2); // G1's orthant key
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+ if (P.dim == 3u) { own = own + select(0u, 4u, c0.z >= g / 2); }
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+ for (var o = grid_cells(); o < grid_cells() + select(4u, 8u, P.dim == 3u); o = o + 1u) { // an outside node: every outside pseudo-cell
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+ f = f + cell_sum(i, pi, o, o == own);
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+ }
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  }
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  }
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  // epilogue (7.9, 7.10): gravity and force += under the guard, the swing / traction reduction outside it (K3's text)
@@ -1,7 +1,7 @@
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  /**
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  * The `histogram` kernel body (spec 6 row 5; P4-T3): one atomicAdd per key into the global `hist` (zeroed by a fill
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  * dispatch earlier in the pass, PD-4). Order-independent, hence deterministic. A key >= P.bins is not counted (the
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- * caller's contract; the grid's keys are always < cells + 1). Body only; normative text.
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+ * caller's contract; the grid's keys are always < cells + 2^dim). Body only; normative text.
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  */
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  export const histogramWgsl = /* wgsl */ `
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  @compute @workgroup_size(WG)