@graphty/graph-io 0.3.40 → 0.3.41

package/dist/obo.js

@@ -1,4 +1,4 @@
-import { O, a, b, o, c } from "./chunks/exporter-SFYkDzD0.js";
+import { O, a, b, o, c } from "./chunks/exporter-NMplSnYn.js";
 export {
   O as OBO_CAPABILITIES,
   a as OBO_ISSUE,

package/dist/pajek.js

@@ -1,4 +1,4 @@
-import { P, a, p, b } from "./chunks/importer-AjwOJrn2.js";
+import { P, a, p, b } from "./chunks/importer-BfbzWk6k.js";
 export {
   P as PAJEK_ISSUE,
   a as PAJEK_LOSS,

package/dist/src/common/attributes.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"attributes.d.ts","sourceRoot":"","sources":["../../../src/common/attributes.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,EACH,KAAK,UAAU,EACf,KAAK,YAAY,EACjB,KAAK,UAAU,EAEf,KAAK,SAAS,EAEjB,MAAM,uBAAuB,CAAC;AAE/B,OAAO,EAAE,KAAK,aAAa,EAAE,MAAM,aAAa,CAAC;AAQjD,OAAO,EACH,KAAK,gBAAgB,EACrB,KAAK,eAAe,EAIvB,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,KAAK,UAAU,EAAiB,MAAM,YAAY,CAAC;AAC5D,OAAO,EAAE,KAAK,mBAAmB,EAAE,KAAK,aAAa,EAAE,MAAM,aAAa,CAAC;AAC3E,OAAO,EAAiB,KAAK,aAAa,EAAqB,MAAM,eAAe,CAAC;AAErF;;;;GAIG;AACH,MAAM,WAAW,yBAAyB;IACtC,4BAA4B;IAC5B,QAAQ,CAAC,MAAM,EAAE,eAAe,CAAC;IACjC,wGAAwG;IACxG,QAAQ,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,sFAAsF;IACtF,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;IAC9B,kFAAkF;IAClF,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IAC7B,mEAAmE;IACnE,QAAQ,CAAC,SAAS,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,SAAS,CAAC;IAC/C,qCAAqC;IACrC,QAAQ,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,SAAS,CAAC;IACjD,0CAA0C;IAC1C,QAAQ,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,SAAS,CAAC;IACjD,0EAA0E;IAC1E,QAAQ,CAAC,UAAU,CAAC,EAAE,UAAU,GAAG,SAAS,CAAC;IAC7C,0CAA0C;IAC1C,QAAQ,CAAC,IAAI,CAAC,EAAE,UAAU,GAAG,IAAI,GAAG,SAAS,CAAC;IAC9C,8DAA8D;IAC9D,QAAQ,CAAC,OAAO,CAAC,EAAE,OAAO,GAAG,SAAS,CAAC;IACvC,oCAAoC;IACpC,QAAQ,CAAC,IAAI,EAAE,KAAK,GAAG,QAAQ,CAAC;IAChC,2FAA2F;IAC3F,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,SAAS,CAAC;CAC5D;AAED;;;;GAIG;AACH,MAAM,WAAW,gBAAgB;IAC7B,0BAA0B;IAC1B,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC;IACjC,uBAAuB;IACvB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,6BAA6B;IAC7B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC5B;AAED;;;;GAIG;AACH,MAAM,WAAW,iBAAiB;IAC9B,iEAAiE;IACjE,QAAQ,CAAC,IAAI,EAAE,UAAU,CAAC;IAC1B,6BAA6B;IAC7B,QAAQ,CAAC,IAAI,EAAE,gBAAgB,CAAC;IAChC,6CAA6C;IAC7C,QAAQ,CAAC,UAAU,EAAE,UAAU,CAAC;IAChC,uFAAuF;IACvF,QAAQ,CAAC,SAAS,EAAE,UAAU,GAAG,IAAI,CAAC;IACtC,kDAAkD;IAClD,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,+FAA+F;IAC/F,QAAQ,CAAC,MAAM,EAAE,SAAS,gBAAgB,EAAE,CAAC;CAChD;AAED;;;GAGG;AACH,eAAO,MAAM,iBAAiB,wBAAyB,CAAC;AACxD;;;GAGG;AACH,eAAO,MAAM,YAAY,qBAAsB,CAAC;AAEhD,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,YAAY,CAAC;AAEjG;;;GAGG;AACH,eAAO,MAAM,gBAAgB,OAAO,CAAC;AAErC;;;;;GAKG;AACH,wBAAgB,gBAAgB,CAAC,KAAK,EAAE,yBAAyB,GAAG,iBAAiB,CA+EpF;AAED;;;;;;;;GAQG;AACH,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,gBAAgB,EAAE,UAAU,EAAE,UAAU,GAAG,OAAO,CAKxG;AAED;;;;;;;GAOG;AACH,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,gBAAgB,GAAG,aAAa,CAOzF;AAID;;;;;;;;GAQG;AACH,wBAAgB,cAAc,CAAC,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAU5E;AAED;;;;;;;GAOG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,IAAI,EAAE,UAAU,GAAG,YAAY,CAElG;AAED;;;;GAIG;AACH,MAAM,WAAW,mBAAmB;IAChC,yBAAyB;IACzB,QAAQ,CAAC,MAAM,EAAE,YAAY,CAAC;IAC9B,kFAAkF;IAClF,QAAQ,CAAC,IAAI,EAAE,UAAU,CAAC;IAC1B,gFAAgF;IAChF,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,+FAA+F;IAC/F,QAAQ,CAAC,WAAW,EAAE,OAAO,CAAC;CACjC;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,eAAe,CAC3B,IAAI,EAAE,SAAS,EACf,MAAM,EAAE,MAAM,GAAG,MAAM,EACvB,IAAI,EAAE,UAAU,EAChB,MAAM,EAAE,mBAAmB,EAC3B,KAAK,CAAC,EAAE,aAAa,GACtB,mBAAmB,CAwBrB;AA2DD;;;;;;;;;;;GAWG;AACH,wBAAgB,gBAAgB,CAC5B,IAAI,EAAE,SAAS,EACf,MAAM,EAAE,MAAM,GAAG,MAAM,EACvB,SAAS,EAAE,UAAU,EACrB,MAAM,CAAC,EAAE,mBAAmB,GAC7B,YAAY,CAgBd;AAED;;;;;;GAMG;AACH,wBAAgB,OAAO,CAAC,IAAI,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAG3F;AAED;;;;;;;;GAQG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,GAAG,IAAI,EAAE,KAAK,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,GAAG,MAAM,CAc1G;AAED;;;;;GAKG;AACH,qBAAa,aAAa;IACtB,OAAO,CAAC,QAAQ,CAAC,QAAQ,CAAqB;IAE9C,OAAO,CAAC,QAAQ,CAAK;IAErB,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAS;IAEpC;;;OAGG;gBACS,UAAU,GAAE,MAAyB;IAIjD;;;OAGG;IACH,IAAI,IAAI,IAAI,MAAM,CAEjB;IAED;;;OAGG;IACH,IAAI,aAAa,IAAI,MAAM,CAE1B;IAED;;;OAGG;IACH,IAAI,OAAO,IAAI,OAAO,CAErB;IAED;;;;OAIG;IACH,OAAO,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO;IAQ/B;;;;OAIG;IACH,MAAM,IAAI,MAAM,GAAG,QAAQ;CAG9B"}

package/dist/src/common/attributes.js

@@ -210,19 +210,12 @@ export function declareResolved(sink, domain, decl, report, where) {
                 throw err;
             }
             if (err.code === "E_COLUMN_EXISTS" && !renamed) {
-                const taken = takenIn(sink, domain);
-                const id = current.origin?.id ?? null;
-                const name = uniqueColumnName(current.name, id, taken);
-                report.warning("coercion", COLUMN_RENAMED_CODE, `${domain} column "${current.name}" renamed to "${name}": the sink already holds that name with another shape`, { ...where, element: where?.element ?? current.name });
-                current = { ...current, name };
+                current = renameColumn(sink, domain, current, report, where);
                 renamed = true;
                 continue;
             }
             if (err.code === "E_DUPLICATE_ROLE" && current.role !== undefined && !roleDropped) {
-                const holder = typeof err.details.holder === "string" ? err.details.holder : "another column";
-                report.warning("coercion", ROLE_TAKEN_CODE, `${domain} column "${current.name}" loses the ${current.role} role: "${holder}" already holds it`, { ...where, element: where?.element ?? current.name });
-                const { role: _role, ...withoutRole } = current;
-                current = withoutRole;
+                current = dropRole(err, domain, current, current.role, report, where);
                 roleDropped = true;
                 continue;
             }
@@ -230,6 +223,38 @@ export function declareResolved(sink, domain, decl, report, where) {
         }
     }
 }
+/**
+ * The declaration under a name the sink does not hold yet, recording W_COLUMN_RENAMED.
+ * @param sink - the sink
+ * @param domain - node or edge
+ * @param decl - the declaration whose name clashed
+ * @param report - the report
+ * @param where - the line and element, when known
+ * @returns the renamed declaration
+ */
+function renameColumn(sink, domain, decl, report, where) {
+    const taken = takenIn(sink, domain);
+    const id = decl.origin?.id ?? null;
+    const name = uniqueColumnName(decl.name, id, taken);
+    report.warning("coercion", COLUMN_RENAMED_CODE, `${domain} column "${decl.name}" renamed to "${name}": the sink already holds that name with another shape`, { ...where, element: where?.element ?? decl.name });
+    return { ...decl, name };
+}
+/**
+ * The declaration without the role another column holds, recording W_ROLE_TAKEN.
+ * @param err - the sink's E_DUPLICATE_ROLE error
+ * @param domain - node or edge
+ * @param decl - the declaration whose role clashed
+ * @param role - its role
+ * @param report - the report
+ * @param where - the line and element, when known
+ * @returns the declaration without its role
+ */
+function dropRole(err, domain, decl, role, report, where) {
+    const holder = typeof err.details.holder === "string" ? err.details.holder : "another column";
+    report.warning("coercion", ROLE_TAKEN_CODE, `${domain} column "${decl.name}" loses the ${role} role: "${holder}" already holds it`, { ...where, element: where?.element ?? decl.name });
+    const { role: _role, ...withoutRole } = decl;
+    return withoutRole;
+}
 /**
  * Declare the companion text column of a temporal column. A table holds at
  * most one column per role, so when another companion already carries `timeText` this one is

package/dist/src/common/attributes.js.map

@@ -1 +1 @@
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package/dist/src/common/input.d.ts.map

@@ -1 +1 @@
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package/dist/src/common/input.js

@@ -1018,132 +1018,210 @@ function reportTextEncoding(report, encoding) {
 export async function* textChunks(rawInput, report, options = {}) {
     const input = normalizeInput(rawInput);
     const signal = options.signal ?? null;
-    const onProgress = options.onProgress ?? null;
     const filter = new TextFilter(report, options);
     throwIfAborted(signal);
     if (typeof input === "string") {
         reportTextEncoding(report, options.encoding);
-        const total = onProgress === null ? 0 : utf8Length(input);
-        let done = 0;
-        let start = 0;
-        while (start < input.length) {
-            throwIfAborted(signal);
-            let end = Math.min(start + DECODE_SLICE, input.length);
-            const highSurrogate = (input.charCodeAt(end - 1) & 0xfc00) === 0xd800; // NOSONAR(S7758): reads UTF-16 code units on purpose
-            if (end < input.length && highSurrogate) {
-                end++; // never split a surrogate pair
-            }
-            const piece = start === 0 && end === input.length ? input : input.slice(start, end);
-            start = end;
-            const text = filter.push(piece);
-            if (text.length > 0) {
-                yield text;
-            }
-            if (onProgress !== null) {
-                done += utf8Length(piece);
-                onProgress(done, total);
-            }
-        }
-        if (input.length === 0) {
-            onProgress?.(0, 0);
-        }
-        filter.end();
+        yield* stringTextChunks(input, filter, options);
         return;
     }
     const decoder = new ByteDecoder(report, options);
-    const headBytes = Math.max(options.declarationBytes ?? HEAD_BYTES, BOM_BYTES);
     if (input instanceof Uint8Array) {
-        const length = input.byteLength;
-        decoder.start(input.subarray(0, headBytes));
-        for (let offset = 0; offset < length; offset += DECODE_SLICE) {
-            throwIfAborted(signal);
-            if (input.byteLength !== length) {
-                throw new GraphFormatError("E_UNSUPPORTED", "the input's buffer was detached (transferred) or resized during the import", { reason: "detached" });
-            }
-            const slice = input.subarray(offset, Math.min(offset + DECODE_SLICE, length));
-            const text = filter.push(decoder.decode(slice, offset + DECODE_SLICE < length));
-            if (text.length > 0) {
-                yield text;
-            }
-            onProgress?.(Math.min(offset + DECODE_SLICE, length), length);
-        }
-        if (length === 0) {
-            onProgress?.(0, 0);
-        }
-        filter.end();
+        yield* byteTextChunks(input, filter, decoder, options);
         return;
     }
-    // the first bytes of a stream are held back until the BOM check (and the declaration check,
-    // when the format has one) can see enough of them, or the input ended, or text arrived, so a
-    // BOM or a declaration split across small chunks is still seen
-    const needed = options.declaredEncoding === undefined ? BOM_BYTES : headBytes;
+    // the stream's loop stays here rather than in a delegated generator: a yield* layer costs
+    // time on every chunk, and a stream may arrive in many small ones
+    const stream = new StreamText(filter, decoder, options);
+    for await (const chunk of isReadableStream(input) ? streamChunks(input, signal) : input) {
+        throwIfAborted(signal);
+        const text = stream.push(chunk);
+        if (text.length > 0) {
+            yield text;
+        }
+        options.onProgress?.(stream.done);
+    }
+    const tail = stream.end();
+    if (tail.length > 0) {
+        yield tail;
+    }
+    filter.end();
+    options.onProgress?.(stream.done, stream.done);
+}
+/**
+ * The end of the slice of a string input that starts at start: DECODE_SLICE code units, one more
+ * when the slice would end between the two halves of a surrogate pair.
+ * @param input - the string
+ * @param start - where the slice starts
+ * @returns where it ends
+ */
+function stringSliceEnd(input, start) {
+    const end = Math.min(start + DECODE_SLICE, input.length);
+    const highSurrogate = (input.charCodeAt(end - 1) & 0xfc00) === 0xd800; // NOSONAR(S7758): reads UTF-16 code units on purpose
+    return end < input.length && highSurrogate ? end + 1 : end;
+}
+/**
+ * textChunks() of a string input: slices of it, through the text filter.
+ * @param input - the string
+ * @param filter - the text checks
+ * @param options - cancellation and progress
+ * @yields the filtered slices
+ * @returns nothing
+ */
+function* stringTextChunks(input, filter, options) {
+    const signal = options.signal ?? null;
+    const onProgress = options.onProgress ?? null;
+    const total = onProgress === null ? 0 : utf8Length(input);
     let done = 0;
-    let head = [];
-    let headLength = 0;
-    const flushHead = (stream) => {
-        const bytes = concatBytes(head);
-        head = [];
-        headLength = 0;
-        decoder.start(bytes.subarray(0, headBytes));
-        return decoder.decode(bytes, stream);
-    };
-    const chunks = isReadableStream(input) ? streamChunks(input, signal) : input;
-    for await (const chunk of chunks) {
+    let start = 0;
+    while (start < input.length) {
         throwIfAborted(signal);
-        let text;
-        const bytes = typeof chunk === "string" ? null : asBytes(chunk);
-        if (typeof chunk === "string") {
-            // finish any byte sequence still pending in the decoder before switching to text; the
-            // BOM and declaration checks apply to the start of the input only, so bytes after text
-            // are never taken for a BOM
-            let pending = "";
-            if (headLength > 0) {
-                pending = decoder.flushBeforeText(() => flushHead(false));
-            }
-            else if (decoder.started) {
-                pending = decoder.flushBeforeText(() => decoder.decode(new Uint8Array(0), false));
-            }
-            else {
-                decoder.start(new Uint8Array(0));
-            }
-            text = filter.push(pending + chunk);
-            done += onProgress === null ? 0 : utf8Length(chunk);
+        const end = stringSliceEnd(input, start);
+        const piece = start === 0 && end === input.length ? input : input.slice(start, end);
+        start = end;
+        const text = filter.push(piece);
+        if (text.length > 0) {
+            yield text;
         }
-        else if (bytes !== null) {
-            done += bytes.byteLength;
-            if (decoder.started) {
-                text = filter.push(decoder.decode(bytes, true));
-            }
-            else {
-                head.push(bytes);
-                headLength += bytes.byteLength;
-                text = headLength >= needed ? filter.push(flushHead(true)) : "";
-            }
+        if (onProgress !== null) {
+            done += utf8Length(piece);
+            onProgress(done, total);
         }
-        else {
+    }
+    if (input.length === 0) {
+        onProgress?.(0, 0);
+    }
+    filter.end();
+}
+/**
+ * textChunks() of a Uint8Array input: slices of it, decoded, through the text filter.
+ * @param input - the bytes
+ * @param filter - the text checks
+ * @param decoder - the byte decoder
+ * @param options - cancellation, progress and the declaration size
+ * @yields the decoded, filtered slices
+ * @returns nothing
+ */
+function* byteTextChunks(input, filter, decoder, options) {
+    const signal = options.signal ?? null;
+    const length = input.byteLength;
+    decoder.start(input.subarray(0, headByteCount(options)));
+    for (let offset = 0; offset < length; offset += DECODE_SLICE) {
+        throwIfAborted(signal);
+        if (input.byteLength !== length) {
+            throw new GraphFormatError("E_UNSUPPORTED", "the input's buffer was detached (transferred) or resized during the import", { reason: "detached" });
+        }
+        const slice = input.subarray(offset, Math.min(offset + DECODE_SLICE, length));
+        const text = filter.push(decoder.decode(slice, offset + DECODE_SLICE < length));
+        if (text.length > 0) {
+            yield text;
+        }
+        options.onProgress?.(Math.min(offset + DECODE_SLICE, length), length);
+    }
+    if (length === 0) {
+        options.onProgress?.(0, 0);
+    }
+    filter.end();
+}
+/**
+ * How many leading bytes the encoding is chosen from: the format's declaration size, at least a BOM.
+ * @param options - the declaration size
+ * @returns the byte count
+ */
+function headByteCount(options) {
+    return Math.max(options.declarationBytes ?? HEAD_BYTES, BOM_BYTES);
+}
+/**
+ * The chunks of a stream input (a ReadableStream or an async iterable of strings and bytes) turned
+ * into filtered text. The first bytes are held back until the BOM check (and the declaration
+ * check, when the format has one) can see enough of them, or the input ended, or text arrived, so
+ * a BOM or a declaration split across small chunks is still seen.
+ */
+class StreamText {
+    /**
+     * Create the reader of one stream input.
+     * @param filter - the text checks
+     * @param decoder - the byte decoder
+     * @param options - progress, the declaration reader and its size
+     */
+    constructor(filter, decoder, options) {
+        this.filter = filter;
+        this.decoder = decoder;
+        /** Bytes read so far (text counted as UTF-8 when progress is reported), for progress. */
+        this.done = 0;
+        this.head = [];
+        this.headLength = 0;
+        this.headBytes = headByteCount(options);
+        this.needed = options.declaredEncoding === undefined ? BOM_BYTES : this.headBytes;
+        this.counting = (options.onProgress ?? null) !== null;
+    }
+    /**
+     * Read the next chunk.
+     * @param chunk - a string or a Uint8Array (anything else is E_UNSUPPORTED)
+     * @returns its filtered text; empty while bytes are held back
+     */
+    push(chunk) {
+        if (typeof chunk === "string") {
+            this.done += this.counting ? utf8Length(chunk) : 0;
+            return this.filter.push(this.beforeText() + chunk);
+        }
+        const bytes = asBytes(chunk);
+        if (bytes === null) {
             throw new GraphFormatError("E_UNSUPPORTED", "an input chunk must be a string or a Uint8Array", {
                 reason: "chunk type",
                 found: typeof chunk,
             });
         }
-        if (text.length > 0) {
-            yield text;
+        this.done += bytes.byteLength;
+        if (this.decoder.started) {
+            return this.filter.push(this.decoder.decode(bytes, true));
         }
-        onProgress?.(done);
+        this.head.push(bytes);
+        this.headLength += bytes.byteLength;
+        return this.headLength >= this.needed ? this.filter.push(this.flushHead(true)) : "";
     }
-    let tail = "";
-    if (headLength > 0) {
-        tail = flushHead(false);
+    /**
+     * The input ended: the filtered text of whatever is still held or pending.
+     * @returns the text
+     */
+    end() {
+        let tail = "";
+        if (this.headLength > 0) {
+            tail = this.flushHead(false);
+        }
+        else if (this.decoder.started) {
+            tail = this.decoder.decode(new Uint8Array(0), false);
+        }
+        return this.filter.push(tail);
     }
-    else if (decoder.started) {
-        tail = decoder.decode(new Uint8Array(0), false);
+    /**
+     * Start the decoder on the held bytes and decode them.
+     * @param stream - whether more bytes follow
+     * @returns their text
+     */
+    flushHead(stream) {
+        const bytes = concatBytes(this.head);
+        this.head = [];
+        this.headLength = 0;
+        this.decoder.start(bytes.subarray(0, this.headBytes));
+        return this.decoder.decode(bytes, stream);
     }
-    tail = filter.push(tail);
-    if (tail.length > 0) {
-        yield tail;
+    /**
+     * A text chunk follows: finish any byte sequence still pending in the decoder before switching
+     * to text. The BOM and declaration checks apply to the start of the input only, so bytes after
+     * text are never taken for a BOM.
+     * @returns the text of the pending bytes
+     */
+    beforeText() {
+        if (this.headLength > 0) {
+            return this.decoder.flushBeforeText(() => this.flushHead(false));
+        }
+        if (this.decoder.started) {
+            return this.decoder.flushBeforeText(() => this.decoder.decode(new Uint8Array(0), false));
+        }
+        this.decoder.start(new Uint8Array(0));
+        return "";
     }
-    filter.end();
-    onProgress?.(done, done);
 }
 /**
  * Whether an input is a ReadableStream (by duck type, so a stream from another realm qualifies).