@graphty/graph-io 0.3.15 → 0.3.17

package/dist/src/registry.js.map

@@ -1 +1 @@
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package/dist/src/types.d.ts

@@ -64,6 +64,28 @@ export interface CommonImportOptions {
      */
     encoding?: string | undefined;
 }
+/**
+ * Which graph of an input that holds several to read: by position or by name, never both. An
+ * importer of a format that can hold several graphs (a Cytoscape session, a CX collection, a JGF
+ * or OBO Graphs `graphs` array) accepts these next to its own options; absent, it reads the first.
+ */
+export interface GraphChoiceOptions {
+    /** The 0-based position of the graph, as `GraphListing.index` gives it. */
+    graphIndex?: number | undefined;
+    /** The name of the graph, as `GraphListing.name` gives it; a name two graphs share is refused. */
+    graphName?: string | undefined;
+}
+/** One graph of an input that can hold several, as an importer's listGraphs() describes it. */
+export interface GraphListing {
+    /** The value graphIndex takes to read it. */
+    readonly index: number;
+    /** The value graphName takes to read it, or null when the graph has no name. */
+    readonly name: string | null;
+    /** The node count when the input states it cheaply, else null. */
+    readonly nodes: number | null;
+    /** The edge count when the input states it cheaply, else null. */
+    readonly edges: number | null;
+}
 /**
  * An importer plugin (design section 8.4): pushes scalars into the caller's sink in one pass and
  * never freezes. `Opts` is its format-specific option set; the default `unknown` lets a caller pass
@@ -102,6 +124,15 @@ export interface GraphImporter<Opts = unknown> {
      * @returns one report per graph, in document order
      */
     importAll?(input: ImportInput, sinkFor: (index: number) => GraphSink, options?: Opts & CommonImportOptions): Promise<ImportReport[]>;
+    /**
+     * List the graphs of an input that can hold several without importing them, so a caller can
+     * offer a choice before reading one with `graphIndex` or `graphName`. An importer without this
+     * method does not list its graphs; `import()` reads the first.
+     * @param input - the text, bytes or stream to read
+     * @param options - format-specific and common options
+     * @returns one listing per graph, in document order
+     */
+    listGraphs?(input: ImportInput, options?: Opts & CommonImportOptions): Promise<readonly GraphListing[]>;
 }
 /**
  * What a format can express without loss (design section 8.5): the fidelity matrix of research

package/dist/src/types.d.ts.map

@@ -1 +1 @@
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package/dist/src/types.js.map

@@ -1 +1 @@
-{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,EAGH,gBAAgB,GAInB,MAAM,uBAAuB,CAAC;AAuP/B;;;;GAIG;AACH,MAAM,OAAO,WAAY,SAAQ,gBAAgB;IAI7C;;;;;OAKG;IACH,YAAY,OAAe,EAAE,MAAoB,EAAE,OAA2C;QAC1F,KAAK,CAAC,UAAU,EAAE,OAAO,EAAE,OAAO,CAAC,CAAC;QACpC,IAAI,CAAC,IAAI,GAAG,aAAa,CAAC;QAC1B,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC;IACzB,CAAC;CACJ"}
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,EAGH,gBAAgB,GAInB,MAAM,uBAAuB,CAAC;AA8R/B;;;;GAIG;AACH,MAAM,OAAO,WAAY,SAAQ,gBAAgB;IAI7C;;;;;OAKG;IACH,YAAY,OAAe,EAAE,MAAoB,EAAE,OAA2C;QAC1F,KAAK,CAAC,UAAU,EAAE,OAAO,EAAE,OAAO,CAAC,CAAC;QACpC,IAAI,CAAC,IAAI,GAAG,aAAa,CAAC;QAC1B,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC;IACzB,CAAC;CACJ"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@graphty/graph-io",
-  "version": "0.3.15",
+  "version": "0.3.17",
   "description": "Importers and exporters (GEXF, GraphML, GML, DOT, Pajek, CSV, JSON, Neo4j) for the @graphty/graph-format snapshot",
   "author": "Adam Powers <apowers@ato.ms>",
   "type": "module",
@@ -92,7 +92,7 @@
   },
   "homepage": "https://github.com/graphty-org/graphty-monorepo/tree/master/graph-io#readme",
   "dependencies": {
-    "@graphty/graph-format": "^1.2.5"
+    "@graphty/graph-format": "^1.2.6"
   },
   "peerDependencies": {
     "@graphty/graph-format": "^1.0.0"

package/src/common/codes.ts

@@ -108,6 +108,64 @@ export const BAD_OPTIONS_CODE = "W_BAD_OPTIONS";
 /** A repeated edge id in a format whose edge ids are unique; the second edge is skipped. */
 export const DUPLICATE_EDGE_ID_CODE = "E_DUPLICATE_EDGE_ID";
 
+/** A value does not parse as its declared type; the cell is left unset. */
+export const BAD_VALUE_CODE = "E_BAD_VALUE";
+
+/**
+ * A column's dtype was widened (design section 5.1) because a later value did not fit: an i32
+ * column meeting a value above 2^31, two declared types for one attribute.
+ */
+export const WIDENED_CODE = "W_WIDENED";
+
+/**
+ * A reference that is not a containment link (an attribute's element id, a layout or bypass
+ * entry, a subnetwork member, a view's network, an undeclared target) names nothing; reported
+ * once per kind with the count.
+ */
+export const DANGLING_REFERENCE_CODE = "W_DANGLING_REFERENCE";
+
+/** The same attribute twice on one element; one value is kept (the later, unless the format's specification says the first). */
+export const DUPLICATE_ATTRIBUTE_CODE = "W_DUPLICATE_ATTRIBUTE";
+
+/** A containment link would close a parent cycle; that one link is dropped. */
+export const PARENT_CYCLE_CODE = "E_PARENT_CYCLE";
+
+/** A formula (Cytoscape's `=ABS($x)`) is kept as its text; it is never evaluated. */
+export const EQUATION_AS_TEXT_CODE = "W_EQUATION_AS_TEXT";
+
+/**
+ * The file's style rules (defaults, mappings, dependencies, visual property aspects) are not
+ * applied to the snapshot; recorded once per import, the message names what was not applied.
+ */
+export const STYLES_NOT_IMPORTED_CODE = "W_STYLES_NOT_IMPORTED";
+
+/** A CX array member that is not a one-key object holding an array or an object; the block is skipped. */
+export const BAD_ASPECT_BLOCK_CODE = "E_BAD_ASPECT_BLOCK";
+
+/** A CX aspect out of its place (after the post-metadata, a status that is not last, a block buffered for what it depends on). */
+export const ASPECT_ORDER_CODE = "W_ASPECT_ORDER";
+
+/** A declared element count disagrees with what was read. */
+export const COUNT_MISMATCH_CODE = "W_COUNT_MISMATCH";
+
+/** The producer marked the document as failed (CX `status.success: false`): it is incomplete (fatal). */
+export const STATUS_FAILED_CODE = "E_STATUS_FAILED";
+
+/** The producer marked the document as successful but attached an error text. */
+export const STATUS_WARNING_CODE = "W_STATUS_WARNING";
+
+/**
+ * The input is beyond a size limit (a zip's uncompressed total or ratio, a document longer than
+ * one string); the same string as graph-format's E_TOO_LARGE, recorded with category "unsupported".
+ */
+export const TOO_LARGE_CODE = "E_TOO_LARGE";
+
+/** `graphIndex` is beyond the graphs of the input, or `graphName` names none of them (fatal). */
+export const GRAPH_NOT_FOUND_CODE = "E_GRAPH_NOT_FOUND";
+
+/** `graphName` names more than one graph of the input; the message lists their indexes (fatal). */
+export const AMBIGUOUS_GRAPH_NAME_CODE = "E_AMBIGUOUS_GRAPH_NAME";
+
 // ============================================================ exporter loss notes
 
 /** A role column the format has no slot for is written as a plain attribute (the role is lost). */

package/src/common/input.ts

@@ -262,6 +262,22 @@ function startsWithUtf8(bytes: Uint8Array): boolean {
     }
 }
 
+/**
+ * A zip entry name as text (APPNOTE 4.4.17): UTF-8 when the bytes are valid UTF-8, whether or not
+ * the entry sets the language-encoding flag (bit 11), else windows-1252 (WHATWG has no CP437, and
+ * session entry names are ASCII in practice). Never throws: a name is a matching key, never a path,
+ * so an undecodable one still has to name its entry.
+ * @param bytes - the name bytes from the central directory or a local header
+ * @returns the name
+ */
+export function decodeEntryName(bytes: Uint8Array): string {
+    try {
+        return new TextDecoder("utf-8", { fatal: true, ignoreBOM: true }).decode(bytes);
+    } catch {
+        return new TextDecoder("windows-1252").decode(bytes);
+    }
+}
+
 /**
  * Join byte chunks.
  * @param chunks - the chunks

package/src/common/options.ts

@@ -7,8 +7,14 @@
 
 import { type DuplicatePolicy, GraphFormatError, type GraphSink, type IdCoercion } from "@graphty/graph-format";
 
-import { type CommonExportOptions, type CommonImportOptions } from "../types.js";
-import { OPTION_IGNORED_CODE, SINK_OPTION_CODE } from "./codes.js";
+import { type CommonExportOptions, type CommonImportOptions, type GraphChoiceOptions } from "../types.js";
+import {
+    AMBIGUOUS_GRAPH_NAME_CODE,
+    GRAPH_NOT_FOUND_CODE,
+    NO_GRAPH_CODE,
+    OPTION_IGNORED_CODE,
+    SINK_OPTION_CODE,
+} from "./codes.js";
 import { canonicalEncoding } from "./input.js";
 import { type ImportReportBuilder } from "./report.js";
 
@@ -188,6 +194,76 @@ export function reportUnusedOptions(
     return recorded;
 }
 
+/**
+ * The graph an importer reads from an input that holds several: the one `graphIndex` or
+ * `graphName` names, else the first. A choice that names no graph is E_GRAPH_NOT_FOUND, a name two
+ * graphs share is E_AMBIGUOUS_GRAPH_NAME, and an input with no graph at all is E_NO_GRAPH, each
+ * fatal (the report fails with ImportError).
+ * @param names - each graph's name (null for an unnamed graph), in document order
+ * @param options - the caller's graphIndex / graphName
+ * @param report - the report a failure is recorded in
+ * @returns the index of the graph to read; E_UNSUPPORTED for an option of the wrong type, or both
+ */
+export function chooseGraph(
+    names: readonly (string | null)[],
+    options: GraphChoiceOptions | undefined,
+    report: ImportReportBuilder,
+): number {
+    const { graphIndex, graphName } = options ?? {};
+    if (
+        graphIndex !== undefined &&
+        (typeof graphIndex !== "number" || !Number.isInteger(graphIndex) || graphIndex < 0)
+    ) {
+        throw new GraphFormatError(
+            "E_UNSUPPORTED",
+            `option graphIndex: ${describe(graphIndex)} is not a non-negative integer`,
+            {
+                option: "graphIndex",
+                found: graphIndex,
+            },
+        );
+    }
+    if (graphName !== undefined && typeof graphName !== "string") {
+        throw new GraphFormatError("E_UNSUPPORTED", `option graphName: ${describe(graphName)} is not a string`, {
+            option: "graphName",
+            found: graphName,
+        });
+    }
+    if (graphIndex !== undefined && graphName !== undefined) {
+        throw new GraphFormatError("E_UNSUPPORTED", "options graphIndex and graphName both choose a graph; pass one", {
+            option: "graphName",
+            found: graphName,
+        });
+    }
+    if (names.length === 0) {
+        return report.fail(NO_GRAPH_CODE, "the input holds no graph");
+    }
+    if (graphName !== undefined) {
+        const matches = names.flatMap((name, i) => (name === graphName ? [i] : []));
+        if (matches.length > 1) {
+            return report.fail(
+                AMBIGUOUS_GRAPH_NAME_CODE,
+                `graphName ${JSON.stringify(graphName)} names the graphs at indexes ${matches.join(", ")}; pass graphIndex`,
+                { element: graphName },
+            );
+        }
+        if (matches.length === 0) {
+            return report.fail(
+                GRAPH_NOT_FOUND_CODE,
+                `graphName ${JSON.stringify(graphName)} names none of the ${names.length} graph(s)`,
+                { element: graphName },
+                { names: [...names] },
+            );
+        }
+        return matches[0];
+    }
+    const index = graphIndex ?? 0;
+    if (index >= names.length) {
+        return report.fail(GRAPH_NOT_FOUND_CODE, `graphIndex ${index} is beyond the ${names.length} graph(s)`);
+    }
+    return index;
+}
+
 /**
  * Apply the design section 8.4 defaults to an importer's common options and check every enum
  * value. Format-specific options in the same object are ignored here.

package/src/formats/json/importer.ts

@@ -43,6 +43,7 @@ import {
 
 import { uniqueColumnName } from "../../common/attributes.js";
 import {
+    BAD_VALUE_CODE,
     DUPLICATE_EDGE_ID_CODE,
     DUPLICATE_NODE_CODE,
     EMPTY_INPUT_CODE,
@@ -157,7 +158,7 @@ export const JSON_ISSUE = Object.freeze({
     /** An index endpoint is not an integer below the node count, or names a skipped node. */
     BAD_INDEX: "E_BAD_INDEX",
     /** A declared field has the wrong JSON type (JGF label / relation / metadata, Cytoscape position / classes). */
-    BAD_VALUE: "E_BAD_VALUE",
+    BAD_VALUE: BAD_VALUE_CODE,
     /** A graph-level flag (`directed`, `multigraph`, graphology `options`) has the wrong type; the default is used. */
     BAD_FLAG: "W_BAD_FLAG",
     /** A Cytoscape `data.parent` names an unknown node. */

package/src/index.ts

@@ -13,8 +13,10 @@ export {
     type CommonExportOptions,
     type CommonImportOptions,
     type ExportCapabilities,
+    type GraphChoiceOptions,
     type GraphExporter,
     type GraphImporter,
+    type GraphListing,
     ImportError,
     type ImportInput,
     type ImportIssue,
@@ -44,6 +46,7 @@ export {
     importGraph,
     type ImportGraphOptions,
     type ImportGraphResult,
+    listGraphs,
     registry,
     sniff,
     UNKNOWN_FORMAT_CODE,
@@ -192,6 +195,7 @@ export {
     isCanonicalIntegerText,
 } from "./common/ids.js";
 export {
+    decodeEntryName,
     inputLength,
     INVALID_UTF8_CODE,
     isImportInput,
@@ -202,6 +206,7 @@ export {
     throwIfAborted,
 } from "./common/input.js";
 export {
+    chooseGraph,
     DEFAULT_ERROR_LIMIT,
     type ImportFormatDefaults,
     reportSinkOptions,

package/src/registry.ts

@@ -30,8 +30,10 @@ import { rankFormats, SNIFF_HEAD_BYTES, type SniffHints, type SniffResult } from
 import {
     type CommonExportOptions,
     type CommonImportOptions,
+    type GraphChoiceOptions,
     type GraphExporter,
     type GraphImporter,
+    type GraphListing,
     type ImportInput,
     type ImportReport,
     type LossNote,
@@ -50,9 +52,10 @@ export type BuilderSeed = Omit<
  * The options of importGraph(): the common import options (which also seed the registry's
  * builder, design section 8.4), the format choice and the hints sniffing uses, the builder and
  * freeze options, and any format-specific option (`delimiter`, `dialect`, ...) passed through to
- * the importer unchanged.
+ * the importer unchanged. `graphIndex` / `graphName` choose one graph of an input that holds
+ * several, for the formats that list their graphs.
  */
-export interface ImportGraphOptions extends CommonImportOptions {
+export interface ImportGraphOptions extends CommonImportOptions, GraphChoiceOptions {
     /** The format name, or "auto" (default) to sniff it from the filename, MIME type and content. */
     readonly format?: string | undefined;
     /** The file name or path the input came from, a hint for sniffing. */
@@ -269,6 +272,26 @@ export class FormatRegistry {
         return reports.map((report, i) => result(chosen, builders[i], report, options));
     }
 
+    /**
+     * The graphs of an input that can hold several, without importing them (a Cytoscape session's
+     * networks, a JGF `graphs` array), so a caller can offer a choice and then pass `graphIndex`
+     * or `graphName` to importGraph(). The format is named or sniffed as by importGraph().
+     * @param input - the text, bytes, stream or chunks to read
+     * @param options - the format, hints, common and format-specific import options
+     * @returns one listing per graph, in document order; null when the format's importer does not
+     * list its graphs (importGraph() then reads the first)
+     */
+    async listGraphs(input: ImportInput, options: ImportGraphOptions = {}): Promise<readonly GraphListing[] | null> {
+        const chosen = await this.choose(input, options);
+        try {
+            return chosen.importer.listGraphs === undefined
+                ? null
+                : await chosen.importer.listGraphs(chosen.source, importerOptions(options));
+        } finally {
+            await chosen.peeked?.close();
+        }
+    }
+
     /**
      * The importer for an input: the named format, or the sniffed one.
      * @param input - the input
@@ -376,6 +399,16 @@ export function importAllGraphs(input: ImportInput, options?: ImportGraphOptions
     return registry.importAllGraphs(input, options);
 }
 
+/**
+ * The graphs of an input that can hold several, through the default registry.
+ * @param input - the text, bytes, stream or chunks to read
+ * @param options - the format, hints, common and format-specific import options
+ * @returns one listing per graph, in document order; null when the format does not list its graphs
+ */
+export function listGraphs(input: ImportInput, options?: ImportGraphOptions): Promise<readonly GraphListing[] | null> {
+    return registry.listGraphs(input, options);
+}
+
 /**
  * Write a snapshot in a format through the default registry, as UTF-8 chunks.
  * @param snapshot - the snapshot

package/src/types.ts

@@ -75,6 +75,30 @@ export interface CommonImportOptions {
     encoding?: string | undefined;
 }
 
+/**
+ * Which graph of an input that holds several to read: by position or by name, never both. An
+ * importer of a format that can hold several graphs (a Cytoscape session, a CX collection, a JGF
+ * or OBO Graphs `graphs` array) accepts these next to its own options; absent, it reads the first.
+ */
+export interface GraphChoiceOptions {
+    /** The 0-based position of the graph, as `GraphListing.index` gives it. */
+    graphIndex?: number | undefined;
+    /** The name of the graph, as `GraphListing.name` gives it; a name two graphs share is refused. */
+    graphName?: string | undefined;
+}
+
+/** One graph of an input that can hold several, as an importer's listGraphs() describes it. */
+export interface GraphListing {
+    /** The value graphIndex takes to read it. */
+    readonly index: number;
+    /** The value graphName takes to read it, or null when the graph has no name. */
+    readonly name: string | null;
+    /** The node count when the input states it cheaply, else null. */
+    readonly nodes: number | null;
+    /** The edge count when the input states it cheaply, else null. */
+    readonly edges: number | null;
+}
+
 /**
  * An importer plugin (design section 8.4): pushes scalars into the caller's sink in one pass and
  * never freezes. `Opts` is its format-specific option set; the default `unknown` lets a caller pass
@@ -117,6 +141,15 @@ export interface GraphImporter<Opts = unknown> {
         sinkFor: (index: number) => GraphSink,
         options?: Opts & CommonImportOptions,
     ): Promise<ImportReport[]>;
+    /**
+     * List the graphs of an input that can hold several without importing them, so a caller can
+     * offer a choice before reading one with `graphIndex` or `graphName`. An importer without this
+     * method does not list its graphs; `import()` reads the first.
+     * @param input - the text, bytes or stream to read
+     * @param options - format-specific and common options
+     * @returns one listing per graph, in document order
+     */
+    listGraphs?(input: ImportInput, options?: Opts & CommonImportOptions): Promise<readonly GraphListing[]>;
 }
 
 /**
@@ -213,7 +246,13 @@ export interface GraphExporter<Opts = unknown> {
 
 /** The categories of an ImportIssue (design section 8.6). */
 export type IssueCategory =
-    "parse-error" | "missing-value" | "validation-error" | "unsupported" | "precision" | "coercion" | "merged";
+    | "parse-error"
+    | "missing-value"
+    | "validation-error"
+    | "unsupported"
+    | "precision"
+    | "coercion"
+    | "merged";
 
 /** One problem found while importing (design section 8.6). */
 export interface ImportIssue {