@graphty/graph-io 0.0.0 → 0.2.1

package/dist/src/formats/csv/importer.js

@@ -0,0 +1,849 @@
+/**
+ * The CSV / TSV importer (design sections 8.4 and 8.6; research note 07 section 2.6): a streaming
+ * edge-list reader for the generic (`source,target[,weight,...]`), Gephi (`Source,Target,Type,Id,
+ * Label,Weight,...`) and headerless (`u v [w]`) dialects, with an optional node table merged by id.
+ *
+ * - The delimiter is sniffed from a preview unless given; LF, CRLF and lone-CR files all read.
+ * - The first row is a header when it holds a known column name or when it is all text over a
+ *   numeric second row (`header: "auto"`); a headerless file is positional: source, target,
+ *   weight (when `weightFrom` is not null), then `column4`... as attributes.
+ * - Endpoint and node ids are text cells coerced by ONE rule per import call (`ids`, default
+ *   "canonical": `"1"` becomes the number 1, `"01"` stays a string) over the node table and the
+ *   edge table alike, so they agree across the two files.
+ * - Direction is per row in the Gephi dialect (`Type` = Directed / Undirected / Mutual, blank =
+ *   `defaultDirected`) and `defaultDirected` (true) otherwise; the first edge row sets the sink's
+ *   direction and later rows that differ go through `onMixedDirection` (expansion by default).
+ * - The weight column (`weightFrom`, default "weight", matched case-insensitively) is parsed per
+ *   row; a blank cell means "no weight given" and the edge is pushed without one.
+ * - Every other column is an attribute: cells are parsed by the fixed lexical grammar of design
+ *   section 5.1 and the sink infers the column dtype (widening per column, never per cell); an
+ *   all-text column of low cardinality becomes a dict (design section 5.4); an `id` column of the
+ *   edge table is the edge id (role id, unique); a `label` column is the label (role label).
+ * - Per-row problems (wrong field count, blank endpoint, invalid weight, bad Type, refused id)
+ *   are recorded and the row skipped; the import aborts with ImportError once `errorLimit` is
+ *   exceeded, on a malformed or unterminated quoted field, on an empty input and on a header
+ *   without endpoint (or id) columns.
+ */
+import { GraphFormatError, INVALID_INDEX, } from "@graphty/graph-format";
+import { declareResolved, RENAMED_CODE, uniqueColumnName } from "../../common/attributes.js";
+import { DUPLICATE_EDGE_ID_CODE as SHARED_DUPLICATE_EDGE_ID_CODE, DUPLICATE_NODE_CODE as SHARED_DUPLICATE_NODE_CODE, EMPTY_INPUT_CODE as SHARED_EMPTY_INPUT_CODE, ID_MERGED_CODE as SHARED_ID_MERGED_CODE, MISSING_ENDPOINT_CODE as SHARED_MISSING_ENDPOINT_CODE, MISSING_ID_CODE as SHARED_MISSING_ID_CODE, ROLE_TAKEN_CODE as SHARED_ROLE_TAKEN_CODE, } from "../../common/codes.js";
+import { DirectionResolver } from "../../common/direction.js";
+import { IdCoercer } from "../../common/ids.js";
+import { throwIfAborted } from "../../common/input.js";
+import { reportSinkOptions, reportUnusedOptions, resolveImportOptions, } from "../../common/options.js";
+import { ImportReportBuilder } from "../../common/report.js";
+import { parseWeightText } from "../../common/weights.js";
+import { EDGE_ID_NAMES, findColumn, headerNames, ID_NAMES, LABEL_NAMES, looksLikeHeader, positionalNames, resolveColumnRef, SOURCE_NAMES, TARGET_NAMES, TYPE_NAME, } from "./header.js";
+import { CsvRecordReader, sniffDelimiter, sniffNewline } from "./records.js";
+import { InferredColumn } from "./values.js";
+/** Issue code: the input holds no header row at all. */
+export const EMPTY_INPUT_CODE = SHARED_EMPTY_INPUT_CODE;
+/** Issue code: the header names no source / target (or, for a node table, no id) column. */
+export const NO_ENDPOINT_COLUMNS_CODE = "E_CSV_NO_ENDPOINT_COLUMNS";
+/** Issue code: a node table without an id column. */
+export const NO_ID_COLUMN_CODE = "E_CSV_NO_ID_COLUMN";
+/** Issue code: a row with a different number of fields than the header. */
+export const FIELD_COUNT_CODE = "E_CSV_FIELD_COUNT";
+/** Issue code: an edge row with a blank source or target cell. */
+export const MISSING_ENDPOINT_CODE = SHARED_MISSING_ENDPOINT_CODE;
+/** Issue code: a node row with a blank id cell. */
+export const MISSING_ID_CODE = SHARED_MISSING_ID_CODE;
+/** Issue code: a Type cell that is not Directed, Undirected or Mutual. */
+export const BAD_TYPE_CODE = "E_CSV_BAD_TYPE";
+/** Issue code: the table has a header and no data rows. */
+export const NO_DATA_ROWS_CODE = "W_CSV_NO_DATA_ROWS";
+/** Issue code: a node table row repeats an id; its attributes overwrite the earlier row's. */
+export const DUPLICATE_NODE_CODE = SHARED_DUPLICATE_NODE_CODE;
+/** Issue code: two distinct id cells became one id under `ids: "number"` (design section 4.1). */
+export const ID_MERGED_CODE = SHARED_ID_MERGED_CODE;
+/** Issue code: an explicitly named weight column the file does not have. */
+export const COLUMN_MISSING_CODE = "W_CSV_COLUMN_MISSING";
+/** Issue code: a column whose role (id, label) is already held by another column of the sink. */
+export const ROLE_TAKEN_CODE = SHARED_ROLE_TAKEN_CODE;
+/** Issue code: a repeated edge id (the column is unique); the edge is skipped. */
+export const DUPLICATE_EDGE_ID_CODE = SHARED_DUPLICATE_EDGE_ID_CODE;
+const TABLE_MODES = new Set(["edges", "nodes", "auto"]);
+/** The common options an edge-table import reads (the rest is reported by reportUnusedOptions). */
+const USED_OPTIONS = new Set([
+    "ids",
+    "addMissingNodes",
+    "duplicateEdges",
+    "selfLoops",
+    "onMixedDirection",
+    "defaultDirected",
+    "weightFrom",
+    "weightDtype",
+    "errorLimit",
+    "signal",
+    "onProgress",
+]);
+/** The common options an import with a node table reads: nodeIdFrom applies to the node table. */
+const USED_OPTIONS_WITH_NODES = new Set([
+    ...USED_OPTIONS,
+    "nodeIdFrom",
+]);
+const BAD_DELIMITERS = new Set(['"', "\n", "\r"]);
+/** The comment characters of the SNAP (`#`) and KONECT (`%`) headers (research note 07 section 2.6). */
+const COMMENT_CHARS = Object.freeze(["#", "%"]);
+/**
+ * The direction a SNAP or KONECT comment header declares (research note 07 section 2.6): SNAP
+ * pages write `# Directed graph` / `# Undirected graph`, KONECT's first line is `% sym` (undirected),
+ * `% asym` (directed) or `% bip` (bipartite, undirected).
+ * @param comments - the leading comment lines
+ * @returns true / false when a line declares the direction, null otherwise
+ */
+function commentDirection(comments) {
+    for (const comment of comments) {
+        const text = comment.slice(1).trim().toLowerCase();
+        if (text.startsWith("directed graph") || text.startsWith("asym")) {
+            return true;
+        }
+        if (text.startsWith("undirected graph") || text.startsWith("sym") || text.startsWith("bip")) {
+            return false;
+        }
+    }
+    return null;
+}
+/**
+ * Apply the defaults of the CSV options and check every value.
+ * @param options - the caller's options
+ * @returns the resolved options; E_UNSUPPORTED for a value outside its set
+ */
+function resolveCsvOptions(options) {
+    const o = options ?? {};
+    if (o.delimiter !== undefined && (typeof o.delimiter !== "string" || o.delimiter.length === 0)) {
+        throw new GraphFormatError("E_UNSUPPORTED", "option delimiter: expected a non-empty string", {
+            option: "delimiter",
+            found: o.delimiter,
+        });
+    }
+    if (o.delimiter !== undefined && BAD_DELIMITERS.has(o.delimiter)) {
+        throw new GraphFormatError("E_UNSUPPORTED", "option delimiter: a quote or a line break cannot delimit", {
+            option: "delimiter",
+            found: o.delimiter,
+        });
+    }
+    if (o.header !== undefined && o.header !== "auto" && typeof o.header !== "boolean") {
+        throw new GraphFormatError("E_UNSUPPORTED", 'option header: expected true, false or "auto"', {
+            option: "header",
+            found: o.header,
+        });
+    }
+    if (o.table !== undefined && !TABLE_MODES.has(o.table)) {
+        throw new GraphFormatError("E_UNSUPPORTED", 'option table: expected "edges", "nodes" or "auto"', {
+            option: "table",
+            found: o.table,
+        });
+    }
+    for (const name of ["sourceColumn", "targetColumn", "idColumn"]) {
+        checkColumnRef(name, o[name]);
+    }
+    if (o.typeColumn !== null) {
+        checkColumnRef("typeColumn", o.typeColumn);
+    }
+    return {
+        delimiter: o.delimiter ?? null,
+        header: o.header ?? "auto",
+        table: o.table ?? "auto",
+        sourceColumn: o.sourceColumn ?? null,
+        targetColumn: o.targetColumn ?? null,
+        typeColumn: o.typeColumn,
+        idColumn: o.idColumn ?? null,
+        nodes: o.nodes ?? null,
+    };
+}
+/**
+ * Check a column reference option: a string name or a non-negative integer position.
+ * @param name - the option name
+ * @param value - the value
+ */
+function checkColumnRef(name, value) {
+    if (value === undefined) {
+        return;
+    }
+    if (typeof value === "string" && value.length > 0) {
+        return;
+    }
+    if (typeof value === "number" && Number.isInteger(value) && value >= 0) {
+        return;
+    }
+    throw new GraphFormatError("E_UNSUPPORTED", `option ${name}: expected a column name or a 0-based position`, {
+        option: name,
+        found: value,
+    });
+}
+/**
+ * Whether a cell is empty (nothing or whitespace only): an unset value, a missing endpoint.
+ * @param text - the cell text
+ * @returns true when blank
+ */
+function isBlank(text) {
+    return text.length === 0 || text.trim().length === 0;
+}
+/**
+ * Whether a cell is unset: blank and not quoted. A quoted blank cell (`""`, `" "`) is a set value
+ * (the empty string is a legal id and a legal value, design section 4.1); an unquoted one is
+ * nothing at all.
+ * @param text - the cell text
+ * @param quoted - whether the cell was quoted
+ * @returns true when the cell carries no value
+ */
+function isUnset(text, quoted) {
+    return quoted !== true && isBlank(text);
+}
+/** Rows between two checks of the cancellation signal on an in-memory input. */
+const ABORT_CHECK_INTERVAL = 64;
+/**
+ * Header names made unique within the table: a repeated name becomes `<name>#<position>` (1-based,
+ * the CSV analogue of the `#<origin.id>` rule of design section 5.6) and is reported.
+ * @param names - the header names
+ * @param report - the report
+ * @param line - the header line
+ * @returns the unique names
+ */
+function uniqueNames(names, report, line) {
+    const seen = new Set();
+    return names.map((name, i) => {
+        const unique = uniqueColumnName(name, String(i + 1), (n) => seen.has(n));
+        seen.add(unique);
+        if (unique !== name) {
+            report.warning("coercion", RENAMED_CODE, `column ${i + 1} "${name}" renamed to "${unique}": the header repeats the name`, { line, element: name });
+        }
+        return unique;
+    });
+}
+/**
+ * Find a column by candidates, skipping indices already claimed by another role.
+ * @param names - the header names
+ * @param candidates - the names to look for
+ * @param claimed - indices taken
+ * @returns the index, or -1
+ */
+function findFree(names, candidates, claimed) {
+    const masked = names.map((name, i) => (claimed.has(i) ? "" : name));
+    return findColumn(masked, candidates);
+}
+/**
+ * Declare a role column (edge id, label) on the sink through the shared design section 5.6 rule:
+ * a name already declared differently is renamed `<name>#<position>` (reported); a role already
+ * held by another column is dropped from this declaration (reported), the values are kept under
+ * the name.
+ * @param sink - the sink
+ * @param domain - node or edge
+ * @param decl - the declaration
+ * @param position - the 1-based column position, for the rename
+ * @param report - the report
+ * @param line - the header line
+ * @returns the handle
+ */
+function declareRoleColumn(sink, domain, decl, position, report, line) {
+    const withOrigin = { ...decl, origin: { ...decl.origin, id: String(position) } };
+    const resolved = declareResolved(sink, domain, withOrigin, report, { line, element: decl.name });
+    if (resolved.roleDropped) {
+        // a unique constraint belongs to the id role; without the role the column is plain text
+        return resolved.handle;
+    }
+    return resolved.handle;
+}
+/**
+ * Parse a Gephi Type cell.
+ * @param text - the cell text
+ * @returns the kind; undefined for a blank cell (the default applies); null for an unknown word
+ */
+function parseKind(text) {
+    if (isBlank(text)) {
+        return undefined;
+    }
+    switch (text.trim().toLowerCase()) {
+        case "directed":
+            return "directed";
+        case "undirected":
+            return "undirected";
+        case "mutual":
+            return "mutual";
+        default:
+            return null;
+    }
+}
+/**
+ * Read one CSV table into the sink.
+ */
+class TableReader {
+    /**
+     * Create a table reader.
+     * @param state - the import state
+     * @param input - the table's input
+     * @param kind - what the table is, or "auto"
+     * @param progress - whether this table reports byte progress
+     */
+    constructor(state, input, kind, progress) {
+        this.plan = null;
+        this.writers = [];
+        this.idHandle = INVALID_INDEX;
+        this.labelHandle = INVALID_INDEX;
+        this.dataRows = 0;
+        this.nodeOrdinal = 0;
+        /** The edge ids seen so far (the id column is unique; a repeat is skipped with an issue). */
+        this.edgeIds = new Set();
+        this.where = { line: null, element: null };
+        this.state = state;
+        this.kind = kind;
+        const readerOptions = {
+            delimiter: state.csv.delimiter,
+            comments: COMMENT_CHARS,
+            signal: state.common.signal,
+            onProgress: progress ? state.common.onProgress : null,
+        };
+        this.reader = new CsvRecordReader(input, state.report, readerOptions);
+    }
+    /**
+     * Read every row; the reader is closed (and a stream cancelled) when the import aborts midway.
+     */
+    async read() {
+        const iterator = this.reader[Symbol.asyncIterator]();
+        try {
+            await this.readRows(iterator);
+        }
+        finally {
+            await iterator.return(undefined);
+        }
+    }
+    /**
+     * Read the header (or decide there is none), resolve the plan, then push every row.
+     * @param iterator - the record iterator
+     */
+    async readRows(iterator) {
+        const { report } = this.state;
+        const first = await iterator.next();
+        const firstRow = first.done
+            ? report.fail(EMPTY_INPUT_CODE, "the input is empty: no header row and no records")
+            : first.value;
+        const firstLine = this.reader.line;
+        const firstQuoted = this.reader.quoted.slice(0, firstRow.length);
+        const pending = [];
+        let header;
+        const { header: mode } = this.state.csv;
+        if (mode === "auto") {
+            const second = await iterator.next();
+            const secondRow = second.done ? null : second.value;
+            const secondLine = this.reader.line;
+            const secondQuoted = this.reader.quoted.slice(0, secondRow?.length ?? 0);
+            header = looksLikeHeader(firstRow, secondRow);
+            if (!header) {
+                pending.push({ row: firstRow, quoted: firstQuoted, line: firstLine });
+            }
+            if (secondRow !== null) {
+                pending.push({ row: secondRow, quoted: secondQuoted, line: secondLine });
+            }
+        }
+        else {
+            header = mode;
+            if (!header) {
+                pending.push({ row: firstRow, quoted: firstQuoted, line: firstLine });
+            }
+        }
+        const names = header ? uniqueNames(headerNames(firstRow), report, firstLine) : positionalNames(firstRow.length);
+        if (this.kind !== "nodes" && this.state.commentDirected === null) {
+            this.state.commentDirected = commentDirection(this.reader.leadingComments);
+        }
+        this.plan = this.resolvePlan(names, header, firstLine);
+        this.prepareColumns(firstLine);
+        for (const { row, quoted, line } of pending) {
+            this.processRow(row, quoted, line);
+        }
+        const { signal } = this.state.common;
+        let sinceCheck = 0;
+        for (;;) {
+            const next = await iterator.next();
+            if (next.done) {
+                break;
+            }
+            this.processRow(next.value, this.reader.quoted, this.reader.line);
+            if (++sinceCheck >= ABORT_CHECK_INTERVAL) {
+                sinceCheck = 0;
+                throwIfAborted(signal);
+            }
+        }
+        for (const writer of this.writers) {
+            writer?.finish();
+        }
+        if (this.dataRows === 0 && header) {
+            report.warning("missing-value", NO_DATA_ROWS_CODE, "the table has a header and no data rows", {
+                line: firstLine,
+            });
+        }
+    }
+    /**
+     * Decide the table's columns from its header.
+     * @param names - the column names
+     * @param header - whether the file has a header row
+     * @param line - the header line
+     * @returns the plan; the import aborts when no endpoints (or id) resolve
+     */
+    resolvePlan(names, header, line) {
+        const { csv, report } = this.state;
+        const width = names.length;
+        let source = -1;
+        let target = -1;
+        if (this.kind !== "nodes") {
+            if (csv.sourceColumn !== null) {
+                source = resolveColumnRef(names, csv.sourceColumn, "sourceColumn");
+            }
+            else if (header) {
+                source = findColumn(names, SOURCE_NAMES);
+            }
+            else {
+                source = width >= 2 ? 0 : -1;
+            }
+            if (csv.targetColumn !== null) {
+                target = resolveColumnRef(names, csv.targetColumn, "targetColumn");
+            }
+            else if (header) {
+                target = findColumn(names, TARGET_NAMES);
+            }
+            else {
+                target = width >= 2 ? 1 : -1;
+            }
+            if (source >= 0 && target >= 0 && source === target) {
+                throw new GraphFormatError("E_UNSUPPORTED", "sourceColumn and targetColumn name the same column", {
+                    option: "targetColumn",
+                    found: names[target],
+                });
+            }
+        }
+        if (source >= 0 && target >= 0) {
+            return this.edgePlan(names, header, source, target);
+        }
+        const shown = names.map((n) => JSON.stringify(n)).join(", ");
+        if (this.kind === "edges" ||
+            (this.kind === "auto" && (csv.sourceColumn !== null || csv.targetColumn !== null))) {
+            report.fail(NO_ENDPOINT_COLUMNS_CODE, `no source / target columns in the header (${shown}); a node table goes in the nodes option`, { line }, { columns: [...names] });
+        }
+        const idResolves = header ? findColumn(names, ID_NAMES) >= 0 : width >= 1;
+        if (this.kind === "auto" && csv.idColumn === null && !idResolves) {
+            report.fail(NO_ENDPOINT_COLUMNS_CODE, `no source / target columns and no id column in the header (${shown}); the input is neither an edge table nor a node table`, { line }, { columns: [...names] });
+        }
+        return this.nodePlan(names, header, line);
+    }
+    /**
+     * The columns of an edge table.
+     * @param names - the column names
+     * @param header - whether the file has a header row
+     * @param source - the source column
+     * @param target - the target column
+     * @returns the plan
+     */
+    edgePlan(names, header, source, target) {
+        const { csv, common, report } = this.state;
+        const claimed = new Set([source, target]);
+        let weight = -1;
+        if (common.weightFrom !== null) {
+            if (header) {
+                weight = findFree(names, [common.weightFrom], claimed);
+                if (weight < 0 && this.state.weightFromExplicit) {
+                    report.warning("missing-value", COLUMN_MISSING_CODE, `weight column ${JSON.stringify(common.weightFrom)} not found; edges are unweighted`, { line: this.reader.line, element: common.weightFrom });
+                }
+            }
+            else if (names.length >= 3 && !claimed.has(2)) {
+                weight = 2;
+            }
+        }
+        if (weight >= 0) {
+            claimed.add(weight);
+        }
+        let type = -1;
+        if (csv.typeColumn === undefined) {
+            if (header && names[source] === "Source" && names[target] === "Target") {
+                type = findFree(names, [TYPE_NAME], claimed);
+                if (type >= 0 && names[type] !== TYPE_NAME) {
+                    type = -1;
+                }
+            }
+        }
+        else if (csv.typeColumn !== null) {
+            type = resolveColumnRef(names, csv.typeColumn, "typeColumn");
+            if (claimed.has(type)) {
+                throw new GraphFormatError("E_UNSUPPORTED", "typeColumn names an endpoint or weight column", {
+                    option: "typeColumn",
+                    found: names[type],
+                });
+            }
+        }
+        if (type >= 0) {
+            claimed.add(type);
+        }
+        const id = header ? findFree(names, EDGE_ID_NAMES, claimed) : -1;
+        if (id >= 0) {
+            claimed.add(id);
+        }
+        const label = header ? findFree(names, LABEL_NAMES, claimed) : -1;
+        if (label >= 0) {
+            claimed.add(label);
+        }
+        const attributes = [];
+        for (let i = 0; i < names.length; i++) {
+            if (!claimed.has(i)) {
+                attributes.push(i);
+            }
+        }
+        return { kind: "edges", names, width: names.length, source, target, weight, type, id, label, attributes };
+    }
+    /**
+     * The columns of a node table.
+     * @param names - the column names
+     * @param header - whether the file has a header row
+     * @param line - the header line
+     * @returns the plan; the import aborts when no id column resolves
+     */
+    nodePlan(names, header, line) {
+        const { csv, common, report } = this.state;
+        const claimed = new Set();
+        let idColumn = -1;
+        if (csv.idColumn !== null) {
+            idColumn = resolveColumnRef(names, csv.idColumn, "idColumn");
+        }
+        else if (header) {
+            idColumn = findColumn(names, ID_NAMES);
+        }
+        else if (names.length >= 1) {
+            idColumn = 0;
+        }
+        const label = header ? findFree(names, LABEL_NAMES, new Set(idColumn >= 0 ? [idColumn] : [])) : -1;
+        let id;
+        switch (common.nodeIdFrom) {
+            case "label":
+                if (label < 0) {
+                    report.fail(NO_ID_COLUMN_CODE, 'nodeIdFrom is "label" but the node table has no label column', {
+                        line,
+                    });
+                }
+                id = label;
+                break;
+            case "index":
+                id = -1;
+                break;
+            default:
+                if (idColumn < 0) {
+                    report.fail(NO_ID_COLUMN_CODE, `no id column in the node table header (${names.map((n) => JSON.stringify(n)).join(", ")})`, { line }, { columns: [...names] });
+                }
+                id = idColumn;
+                claimed.add(idColumn);
+                break;
+        }
+        if (label >= 0) {
+            claimed.add(label);
+        }
+        const attributes = [];
+        for (let i = 0; i < names.length; i++) {
+            if (!claimed.has(i)) {
+                attributes.push(i);
+            }
+        }
+        return { kind: "nodes", names, width: names.length, id, label, attributes };
+    }
+    /**
+     * Declare the role columns and create a writer per attribute column.
+     * @param line - the header line
+     */
+    prepareColumns(line) {
+        const plan = this.requirePlan();
+        const { sink, report } = this.state;
+        const domain = plan.kind === "edges" ? "edge" : "node";
+        const origin = { format: "csv" };
+        if (plan.kind === "edges" && plan.id >= 0) {
+            this.idHandle = declareRoleColumn(sink, "edge", { name: plan.names[plan.id], dtype: "string", nullable: true, role: "id", unique: true, origin }, plan.id + 1, report, line);
+        }
+        if (plan.label >= 0) {
+            this.labelHandle = declareRoleColumn(sink, domain, { name: plan.names[plan.label], dtype: "string", nullable: true, role: "label", origin }, plan.label + 1, report, line);
+        }
+        this.writers = plan.names.map(() => null);
+        for (const index of plan.attributes) {
+            this.writers[index] = new InferredColumn(plan.names[index], domain, sink, report);
+        }
+    }
+    /**
+     * The plan, which exists once the header was read.
+     * @returns the plan
+     */
+    requirePlan() {
+        if (this.plan === null) {
+            throw new GraphFormatError("E_UNSUPPORTED", "the header has not been read", { reason: "no plan" });
+        }
+        return this.plan;
+    }
+    /**
+     * Push one data row.
+     * @param row - the cells
+     * @param quoted - whether each cell was quoted (a quoted empty cell is the empty string)
+     * @param line - the row's line
+     */
+    processRow(row, quoted, line) {
+        const plan = this.requirePlan();
+        this.dataRows++;
+        if (plan.kind === "edges") {
+            this.processEdgeRow(plan, row, quoted, line);
+        }
+        else {
+            this.processNodeRow(plan, row, quoted, line);
+        }
+    }
+    /**
+     * Push one edge row: endpoints, weight, direction, then the attribute cells.
+     * @param plan - the edge plan
+     * @param row - the cells
+     * @param quoted - whether each cell was quoted
+     * @param line - the row's line
+     */
+    processEdgeRow(plan, row, quoted, line) {
+        const { report, sink, resolver, common } = this.state;
+        const { counts } = report;
+        if (row.length !== plan.width) {
+            report.error("validation-error", FIELD_COUNT_CODE, `line ${line}: ${row.length} field(s), the header has ${plan.width}`, { line });
+            counts.skippedEdges++;
+            return;
+        }
+        const sourceText = row[plan.source];
+        const targetText = row[plan.target];
+        const sourceMissing = isUnset(sourceText, quoted[plan.source]);
+        if (sourceMissing || isUnset(targetText, quoted[plan.target])) {
+            report.error("missing-value", MISSING_ENDPOINT_CODE, `line ${line}: blank ${sourceMissing ? "source" : "target"} cell`, { line });
+            counts.skippedEdges++;
+            return;
+        }
+        let kind = (this.state.commentDirected ?? common.defaultDirected) ? "directed" : "undirected";
+        if (plan.type >= 0) {
+            const parsed = parseKind(row[plan.type]);
+            if (parsed === null) {
+                report.error("validation-error", BAD_TYPE_CODE, `line ${line}: Type ${JSON.stringify(row[plan.type])} is not Directed, Undirected or Mutual`, { line });
+                counts.skippedEdges++;
+                return;
+            }
+            if (parsed !== undefined) {
+                kind = parsed;
+            }
+        }
+        const { where } = this;
+        where.line = line;
+        where.element = null;
+        const idText = plan.id >= 0 && !isUnset(row[plan.id], quoted[plan.id]) ? row[plan.id] : null;
+        if (idText !== null) {
+            if (this.edgeIds.has(idText)) {
+                report.error("validation-error", DUPLICATE_EDGE_ID_CODE, `line ${line}: edge id ${JSON.stringify(idText)} repeats an earlier row's; the row is skipped`, { line, element: idText });
+                counts.skippedEdges++;
+                return;
+            }
+            this.edgeIds.add(idText);
+        }
+        let edge;
+        try {
+            const source = this.coerce(sourceText);
+            const target = this.coerce(targetText);
+            const weight = plan.weight >= 0 ? parseWeightText(row[plan.weight]) : undefined;
+            if (!this.state.headerSet) {
+                this.state.headerSet = true;
+                resolver.setHeader(kind !== "undirected", where);
+            }
+            const sourceNew = sink.indexOf(source) === INVALID_INDEX;
+            const targetNew = source !== target && sink.indexOf(target) === INVALID_INDEX;
+            const before = sink.edgeCount;
+            edge = resolver.addEdge(source, target, kind, weight, where);
+            counts.edges += sink.edgeCount - before;
+            counts.nodes += (sourceNew ? 1 : 0) + (targetNew ? 1 : 0);
+        }
+        catch (err) {
+            where.element = idText ?? `${sourceText}->${targetText}`;
+            report.recordError(err, where);
+            counts.skippedEdges++;
+            return;
+        }
+        if (idText !== null) {
+            this.writeRole(this.idHandle, "edge", edge, idText, plan.names[plan.id], line);
+        }
+        if (plan.label >= 0 && !isUnset(row[plan.label], quoted[plan.label])) {
+            this.writeRole(this.labelHandle, "edge", edge, row[plan.label], plan.names[plan.label], line);
+        }
+        this.writeAttributes(plan, row, quoted, edge, line);
+    }
+    /**
+     * Push one node row: the id, then the label and attribute cells.
+     * @param plan - the node plan
+     * @param row - the cells
+     * @param quoted - whether each cell was quoted
+     * @param line - the row's line
+     */
+    processNodeRow(plan, row, quoted, line) {
+        const { report, sink } = this.state;
+        const { counts } = report;
+        const ordinal = this.nodeOrdinal++;
+        if (row.length !== plan.width) {
+            report.error("validation-error", FIELD_COUNT_CODE, `line ${line}: ${row.length} field(s), the header has ${plan.width}`, { line });
+            counts.skippedNodes++;
+            return;
+        }
+        const idText = plan.id >= 0 ? row[plan.id] : String(ordinal);
+        if (plan.id >= 0 && isUnset(idText, quoted[plan.id])) {
+            report.error("missing-value", MISSING_ID_CODE, `line ${line}: blank id cell`, { line });
+            counts.skippedNodes++;
+            return;
+        }
+        const { where } = this;
+        where.line = line;
+        where.element = idText;
+        let index;
+        try {
+            const id = plan.id >= 0 ? this.coerce(idText) : ordinal;
+            if (sink.indexOf(id) !== INVALID_INDEX) {
+                report.warning("merged", DUPLICATE_NODE_CODE, `line ${line}: node ${JSON.stringify(id)} already exists; its attributes are overwritten`, where);
+            }
+            else {
+                counts.nodes++;
+            }
+            index = sink.addNode(id);
+        }
+        catch (err) {
+            report.recordError(err, where);
+            counts.skippedNodes++;
+            return;
+        }
+        if (plan.label >= 0 && !isUnset(row[plan.label], quoted[plan.label])) {
+            this.writeRole(this.labelHandle, "node", index, row[plan.label], plan.names[plan.label], line);
+        }
+        this.writeAttributes(plan, row, quoted, index, line);
+    }
+    /**
+     * Coerce an id cell, reporting a merge under `ids: "number"`.
+     * @param text - the cell text
+     * @returns the id
+     */
+    coerce(text) {
+        const id = this.state.coercer.text(text);
+        const merge = this.state.coercer.lastMerge;
+        if (merge !== null) {
+            this.state.report.warnOnce("coercion", ID_MERGED_CODE, `id ${JSON.stringify(merge.text)} merged with ${JSON.stringify(merge.previousText)} as ${merge.id} under ids: "number"`, this.where);
+        }
+        return id;
+    }
+    /**
+     * Write a role column cell (edge id, label).
+     * @param handle - the column handle
+     * @param domain - node or edge
+     * @param row - the node or edge index
+     * @param text - the cell text
+     * @param name - the column name, for issues
+     * @param line - the row's line
+     */
+    writeRole(handle, domain, row, text, name, line) {
+        try {
+            if (domain === "node") {
+                this.state.sink.setNodeValue(handle, row, text);
+            }
+            else {
+                this.state.sink.setEdgeValue(handle, row, text);
+            }
+        }
+        catch (err) {
+            this.state.report.recordError(err, { line, element: name });
+        }
+    }
+    /**
+     * Write the attribute cells of a row: an unquoted blank cell is unset, a quoted one (`""`,
+     * `" "`) is the text it holds.
+     * @param plan - the plan
+     * @param row - the cells
+     * @param quoted - whether each cell was quoted
+     * @param index - the node or edge index
+     * @param line - the row's line
+     */
+    writeAttributes(plan, row, quoted, index, line) {
+        for (const k of plan.attributes) {
+            const text = row[k];
+            if (isUnset(text, quoted[k])) {
+                continue;
+            }
+            const writer = this.writers[k];
+            if (writer === null) {
+                continue;
+            }
+            try {
+                writer.write(index, text);
+            }
+            catch (err) {
+                this.state.report.recordError(err, { line, element: writer.name });
+            }
+        }
+    }
+}
+const HEAD_BYTES = 4096;
+const OTHER_FORMAT = /^\s*(<|[[{]|(strict\s+)?(di)?graph(\s+\S+)?\s*\{|\*vertices|creator\b|graph\s*\[)/i;
+/**
+ * Sniff confidence for the registry: 0 for XML, JSON, GML, DOT and Pajek openings; otherwise a
+ * delimited first row with endpoint headers is 0.9, with an id header 0.6, any consistently
+ * delimited rows 0.3, a single column 0.
+ * @param head - the first bytes of the input
+ * @returns a confidence in 0..1
+ */
+function sniff(head) {
+    const text = new TextDecoder("utf-8").decode(head.subarray(0, HEAD_BYTES));
+    const body = text.startsWith(String.fromCharCode(0xfeff)) ? text.slice(1) : text;
+    if (body.trim().length === 0 || OTHER_FORMAT.test(body)) {
+        return 0;
+    }
+    const newline = sniffNewline(body);
+    const delimiter = sniffDelimiter(body, newline);
+    if (delimiter === null) {
+        return 0;
+    }
+    const end = body.indexOf(newline);
+    const firstLine = end < 0 ? body : body.slice(0, end);
+    const names = headerNames(firstLine.replace(/\r$/, "").split(delimiter));
+    if (findColumn(names, SOURCE_NAMES) >= 0 && findColumn(names, TARGET_NAMES) >= 0) {
+        return 0.9;
+    }
+    if (findColumn(names, ID_NAMES) >= 0) {
+        return 0.6;
+    }
+    return 0.3;
+}
+/**
+ * Import a CSV edge table (and an optional node table) into a sink.
+ * @param input - the edge table (or, with `table: "nodes"` or a header without endpoints, a node table)
+ * @param sink - the sink
+ * @param options - CSV and common options
+ * @returns the report; ImportError with the partial report when the import aborts
+ */
+async function importCsv(input, sink, options) {
+    const common = resolveImportOptions(options, { ids: "canonical", defaultDirected: true, weightFrom: "weight" });
+    const csv = resolveCsvOptions(options);
+    const report = new ImportReportBuilder("csv", common.errorLimit);
+    reportSinkOptions(sink, options, report);
+    reportUnusedOptions(options, report, csv.table === "nodes" || csv.nodes !== null ? USED_OPTIONS_WITH_NODES : USED_OPTIONS);
+    const state = {
+        sink,
+        report,
+        common,
+        csv,
+        weightFromExplicit: typeof options?.weightFrom === "string",
+        coercer: new IdCoercer(common.ids),
+        resolver: new DirectionResolver(sink, report, common.onMixedDirection),
+        headerSet: false,
+        commentDirected: null,
+    };
+    if (csv.nodes !== null) {
+        await new TableReader(state, csv.nodes, "nodes", false).read();
+    }
+    await new TableReader(state, input, csv.table, true).read();
+    if (state.coercer.mergeCount > 1) {
+        report.warning("coercion", ID_MERGED_CODE, `${state.coercer.mergeCount} id cell(s) merged into ids other cells already produced under ids: "number"`);
+    }
+    throwIfAborted(common.signal);
+    return report.finish();
+}
+/** The CSV / TSV importer plugin (subpath `@graphty/graph-io/csv`). */
+export const csvImporter = Object.freeze({
+    format: "csv",
+    extensions: Object.freeze([".csv", ".tsv", ".edges", ".edgelist"]),
+    mimeTypes: Object.freeze(["text/csv", "text/tab-separated-values", "text/plain"]),
+    sniff,
+    import: importCsv,
+});
+//# sourceMappingURL=importer.js.map