@graphty/algorithms 1.3.1 → 1.4.2

package/dist/src/algorithms/community/louvain-optimized.js

@@ -1,4 +1,11 @@
+/**
+ * Optimized Louvain implementation with early pruning and threshold cycling
+ */
 export class OptimizedLouvain {
+    /**
+     * Create an optimized Louvain detector for the given graph
+     * @param graph - The input graph to detect communities in
+     */
     constructor(graph) {
         this.graph = graph;
         this.communities = new Map();
@@ -14,6 +21,8 @@ export class OptimizedLouvain {
     }
     /**
      * Run optimized Louvain algorithm
+     * @param options - Algorithm configuration options
+     * @returns Community detection result with communities, modularity, and iterations
      */
     detectCommunities(options = {}) {
         const { resolution = 1.0, maxIterations = 100, tolerance = 1e-6, pruneLeaves = true, importanceOrdering = true, pruningThreshold = 0.01, thresholdCycling = true, } = options;
@@ -24,13 +33,11 @@ export class OptimizedLouvain {
         let improved = true;
         while (iteration < maxIterations && improved) {
             // Get nodes in optimal processing order
-            const orderedNodes = importanceOrdering ?
-                this.getNodesInImportanceOrder() :
-                Array.from(this.graph.nodes()).map((n) => n.id);
+            const orderedNodes = importanceOrdering
+                ? this.getNodesInImportanceOrder()
+                : Array.from(this.graph.nodes()).map((n) => n.id);
             // Apply adaptive threshold
-            const threshold = thresholdCycling ?
-                this.getAdaptiveThreshold(iteration, pruningThreshold) :
-                0;
+            const threshold = thresholdCycling ? this.getAdaptiveThreshold(iteration, pruningThreshold) : 0;
             // Perform local optimization
             improved = this.performLocalMoving(orderedNodes, {
                 pruneLeaves,
@@ -104,6 +111,7 @@ export class OptimizedLouvain {
     }
     /**
      * Get nodes ordered by importance (degree * log(weight))
+     * @returns Array of node IDs sorted by descending importance
      */
     getNodesInImportanceOrder() {
         const nodeImportance = new Map();
@@ -121,6 +129,12 @@ export class OptimizedLouvain {
     }
     /**
      * Perform local moving phase with optimizations
+     * @param nodes - Array of node IDs to process
+     * @param options - Local moving options
+     * @param options.pruneLeaves - Whether to skip leaf nodes
+     * @param options.threshold - Minimum gain threshold for moves
+     * @param options.resolution - Resolution parameter for modularity
+     * @returns True if any improvement was made, false otherwise
      */
     performLocalMoving(nodes, options) {
         const { pruneLeaves, threshold, resolution } = options;
@@ -172,6 +186,8 @@ export class OptimizedLouvain {
     }
     /**
      * Check if node is a leaf (degree 1)
+     * @param nodeId - The node ID to check
+     * @returns True if the node has degree 1, false otherwise
      */
     isLeafNode(nodeId) {
         const degree = this.nodeDegrees.get(nodeId) ?? 0;
@@ -179,6 +195,9 @@ export class OptimizedLouvain {
     }
     /**
      * Get adaptive threshold that decreases with iterations
+     * @param iteration - Current iteration number
+     * @param baseThreshold - Base threshold value to scale
+     * @returns Adaptive threshold value that decays over iterations
      */
     getAdaptiveThreshold(iteration, baseThreshold) {
         // Exponentially decay threshold with iterations
@@ -187,6 +206,10 @@ export class OptimizedLouvain {
     }
     /**
      * Calculate modularity gain from moving a node to a community
+     * @param nodeId - The node ID to move
+     * @param targetCommunity - The target community ID
+     * @param resolution - Resolution parameter for modularity calculation
+     * @returns The modularity gain from moving the node
      */
     calculateModularityGain(nodeId, targetCommunity, resolution) {
         const nodeWeight = this.nodeWeights.get(nodeId) ?? 0;
@@ -210,11 +233,13 @@ export class OptimizedLouvain {
         // Weight of target community
         const targetWeight = this.communityWeights.get(targetCommunity) ?? 0;
         // Modularity gain formula
-        const gain = (weightToTarget - ((resolution * nodeWeight * targetWeight) / (2 * this.totalWeight))) / this.totalWeight;
+        const gain = (weightToTarget - (resolution * nodeWeight * targetWeight) / (2 * this.totalWeight)) / this.totalWeight;
         return gain;
     }
     /**
      * Remove node from community (for gain calculation)
+     * @param nodeId - The node ID to remove
+     * @param community - The community ID to remove from
      */
     removeNodeFromCommunity(nodeId, community) {
         const nodeWeight = this.nodeWeights.get(nodeId) ?? 0;
@@ -223,6 +248,8 @@ export class OptimizedLouvain {
     }
     /**
      * Add node to community
+     * @param nodeId - The node ID to add
+     * @param community - The community ID to add to
      */
     addNodeToCommunity(nodeId, community) {
         const nodeWeight = this.nodeWeights.get(nodeId) ?? 0;
@@ -231,6 +258,8 @@ export class OptimizedLouvain {
     }
     /**
      * Get neighboring communities of a node
+     * @param nodeId - The node ID to find neighbor communities for
+     * @returns Set of community IDs that neighbors belong to
      */
     getNeighborCommunities(nodeId) {
         const communities = new Set();
@@ -253,6 +282,8 @@ export class OptimizedLouvain {
     }
     /**
      * Calculate total modularity
+     * @param resolution - Resolution parameter for modularity calculation
+     * @returns The modularity score of the current partition
      */
     calculateModularity(resolution) {
         if (this.totalWeight === 0) {
@@ -288,6 +319,7 @@ export class OptimizedLouvain {
     }
     /**
      * Get pruning statistics
+     * @returns Statistics about nodes pruned during optimization
      */
     getPruningStats() {
         return { ...this.pruningStats };
@@ -295,6 +327,9 @@ export class OptimizedLouvain {
 }
 /**
  * Optimized Louvain algorithm with automatic optimization selection
+ * @param graph - The input graph to detect communities in
+ * @param options - Algorithm configuration options
+ * @returns Community detection result with communities, modularity, and iterations
  */
 export function louvainOptimized(graph, options = {}) {
     const optimizer = new OptimizedLouvain(graph);

package/dist/src/algorithms/community/louvain-optimized.js.map

@@ -1 +1 @@
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package/dist/src/algorithms/community/louvain.d.ts

@@ -8,9 +8,8 @@ import type { CommunityResult, LouvainOptions } from "../../types/index.js";
  *
  * References:
  * - Blondel, V. D., Guillaume, J. L., Lambiotte, R., & Lefebvre, E. (2008).
- *   Fast unfolding of communities in large networks.
- *   Journal of statistical mechanics: theory and experiment, 2008(10), P10008.
- *
+ * Fast unfolding of communities in large networks.
+ * Journal of statistical mechanics: theory and experiment, 2008(10), P10008.
  * @param graph - The input graph
  * @param options - Algorithm options
  * @returns Community detection result with communities, modularity, and iterations

package/dist/src/algorithms/community/louvain.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"louvain.d.ts","sourceRoot":"","sources":["../../../../src/algorithms/community/louvain.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,KAAK,EAAC,MAAM,qBAAqB,CAAC;AAC1C,OAAO,KAAK,EAAC,eAAe,EAAE,cAAc,EAAS,MAAM,sBAAsB,CAAC;AASlF;;;;;;;;;;;;;;GAcG;AACH,wBAAgB,OAAO,CACnB,KAAK,EAAE,KAAK,EACZ,OAAO,GAAE,cAAmB,GAC7B,eAAe,CAkDjB"}
+{"version":3,"file":"louvain.d.ts","sourceRoot":"","sources":["../../../../src/algorithms/community/louvain.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,MAAM,qBAAqB,CAAC;AAC5C,OAAO,KAAK,EAAE,eAAe,EAAE,cAAc,EAAU,MAAM,sBAAsB,CAAC;AAIpF;;;;;;;;;;;;;GAaG;AACH,wBAAgB,OAAO,CAAC,KAAK,EAAE,KAAK,EAAE,OAAO,GAAE,cAAmB,GAAG,eAAe,CAkDnF"}

package/dist/src/algorithms/community/louvain.js

@@ -1,5 +1,5 @@
 import { louvainOptimized } from "./louvain-optimized.js";
-import { calculateModularity, getNeighborCommunities, getNodeDegree, getTotalEdgeWeight, } from "./modularity-utils.js";
+import { calculateModularity, getNeighborCommunities, getNodeDegree, getTotalEdgeWeight } from "./modularity-utils.js";
 /**
  * Louvain community detection algorithm
  *
@@ -8,9 +8,8 @@ import { calculateModularity, getNeighborCommunities, getNodeDegree, getTotalEdg
  *
  * References:
  * - Blondel, V. D., Guillaume, J. L., Lambiotte, R., & Lefebvre, E. (2008).
- *   Fast unfolding of communities in large networks.
- *   Journal of statistical mechanics: theory and experiment, 2008(10), P10008.
- *
+ * Fast unfolding of communities in large networks.
+ * Journal of statistical mechanics: theory and experiment, 2008(10), P10008.
  * @param graph - The input graph
  * @param options - Algorithm options
  * @returns Community detection result with communities, modularity, and iterations
@@ -45,7 +44,7 @@ export function louvain(graph, options = {}) {
         if (improved) {
             const newModularity = calculateModularity(graph, communities, resolution);
             // Check for convergence
-            if ((newModularity - modularity) < tolerance) {
+            if (newModularity - modularity < tolerance) {
                 break;
             }
             modularity = newModularity;
@@ -60,6 +59,8 @@ export function louvain(graph, options = {}) {
 }
 /**
  * Initialize communities: each node in its own community
+ * @param graph - The input graph
+ * @returns Map of node IDs to their initial community IDs
  */
 function initializeCommunities(graph) {
     const communities = new Map();
@@ -73,6 +74,10 @@ function initializeCommunities(graph) {
  * Phase 1 of Louvain algorithm: Local optimization
  * For each node, try moving to neighboring communities and keep the move
  * that provides the best modularity gain.
+ * @param graph - The input graph
+ * @param communities - Map of node IDs to community IDs
+ * @param resolution - Resolution parameter for modularity calculation
+ * @returns True if any improvement was made, false otherwise
  */
 function louvainPhase1(graph, communities, resolution) {
     let globalImprovement = false;
@@ -113,6 +118,12 @@ function louvainPhase1(graph, communities, resolution) {
 }
 /**
  * Calculate modularity contribution of a node to a specific community
+ * @param graph - The input graph
+ * @param nodeId - The node ID to evaluate
+ * @param community - The community to measure contribution to
+ * @param communities - Map of all node IDs to community IDs
+ * @param resolution - Resolution parameter for modularity calculation
+ * @returns The modularity contribution of the node to the specified community
  */
 function nodeModularityContribution(graph, nodeId, community, communities, resolution) {
     const totalEdgeWeight = getTotalEdgeWeight(graph);
@@ -138,11 +149,13 @@ function nodeModularityContribution(graph, nodeId, community, communities, resol
         }
     }
     // Modularity formula: Q = (1/2m) * Σ[A_ij - (k_i * k_j)/(2m)] * δ(c_i, c_j)
-    const modularityIncrease = (internalLinks - ((resolution * nodeDegree * communityDegree) / (2 * totalEdgeWeight))) / totalEdgeWeight;
+    const modularityIncrease = (internalLinks - (resolution * nodeDegree * communityDegree) / (2 * totalEdgeWeight)) / totalEdgeWeight;
     return modularityIncrease;
 }
 /**
  * Extract final community structure
+ * @param communities - Map of node IDs to community IDs
+ * @returns Array of communities (each is an array of node IDs)
  */
 function extractCommunities(communities) {
     const communityMap = new Map();

package/dist/src/algorithms/community/louvain.js.map

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package/dist/src/algorithms/community/modularity-utils.d.ts

@@ -10,7 +10,6 @@ import type { NodeId } from "../../types/index.js";
  *
  * For undirected graphs, each edge is counted once.
  * For directed graphs, each directed edge is counted once.
- *
  * @param graph - The input graph
  * @returns Total sum of edge weights (default weight is 1)
  */
@@ -19,7 +18,6 @@ export declare function getTotalEdgeWeight(graph: Graph): number;
  * Get the total degree (sum of edge weights) for a node
  *
  * Computes the weighted degree by summing all edge weights incident to the node.
- *
  * @param graph - The input graph
  * @param nodeId - The node ID to compute degree for
  * @returns The weighted degree of the node
@@ -29,7 +27,6 @@ export declare function getNodeDegree(graph: Graph, nodeId: NodeId): number;
  * Get communities of neighboring nodes
  *
  * Returns the set of community IDs that neighbors of the given node belong to.
- *
  * @param graph - The input graph
  * @param nodeId - The node to get neighbor communities for
  * @param communities - Map from node IDs to community IDs
@@ -49,7 +46,6 @@ export declare function getNeighborCommunities(graph: Graph, nodeId: NodeId, com
  * - k_i, k_j = degrees of nodes i and j
  * - γ = resolution parameter (higher values favor smaller communities)
  * - δ = Kronecker delta (1 if same community, 0 otherwise)
- *
  * @param graph - The input graph
  * @param communities - Map from node IDs to community IDs
  * @param resolution - Resolution parameter (default: 1.0)

package/dist/src/algorithms/community/modularity-utils.d.ts.map

@@ -1 +1 @@
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package/dist/src/algorithms/community/modularity-utils.js

@@ -3,7 +3,6 @@
  *
  * For undirected graphs, each edge is counted once.
  * For directed graphs, each directed edge is counted once.
- *
  * @param graph - The input graph
  * @returns Total sum of edge weights (default weight is 1)
  */
@@ -18,7 +17,6 @@ export function getTotalEdgeWeight(graph) {
  * Get the total degree (sum of edge weights) for a node
  *
  * Computes the weighted degree by summing all edge weights incident to the node.
- *
  * @param graph - The input graph
  * @param nodeId - The node ID to compute degree for
  * @returns The weighted degree of the node
@@ -35,7 +33,6 @@ export function getNodeDegree(graph, nodeId) {
  * Get communities of neighboring nodes
  *
  * Returns the set of community IDs that neighbors of the given node belong to.
- *
  * @param graph - The input graph
  * @param nodeId - The node to get neighbor communities for
  * @param communities - Map from node IDs to community IDs
@@ -64,7 +61,6 @@ export function getNeighborCommunities(graph, nodeId, communities) {
  * - k_i, k_j = degrees of nodes i and j
  * - γ = resolution parameter (higher values favor smaller communities)
  * - δ = Kronecker delta (1 if same community, 0 otherwise)
- *
  * @param graph - The input graph
  * @param communities - Map from node IDs to community IDs
  * @param resolution - Resolution parameter (default: 1.0)
@@ -103,7 +99,7 @@ export function calculateModularity(graph, communities, resolution = 1.0) {
                 }
                 const degreeI = getNodeDegree(graph, nodeI.id);
                 const degreeJ = getNodeDegree(graph, nodeJ.id);
-                modularity += edgeWeight - ((resolution * degreeI * degreeJ) / (2 * totalEdgeWeight));
+                modularity += edgeWeight - (resolution * degreeI * degreeJ) / (2 * totalEdgeWeight);
             }
         }
     }

package/dist/src/algorithms/community/modularity-utils.js.map

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package/dist/src/algorithms/components/connected.d.ts

@@ -8,47 +8,70 @@ import type { NodeId } from "../../types/index.js";
  */
 /**
  * Find connected components in an undirected graph using Union-Find
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of connected components, each containing an array of node IDs
  */
 export declare function connectedComponents(graph: Graph): NodeId[][];
 /**
  * Find connected components using DFS (alternative implementation)
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of connected components, each containing an array of node IDs
  */
 export declare function connectedComponentsDFS(graph: Graph): NodeId[][];
 /**
  * Find the number of connected components
+ * @param graph - The input graph (must be undirected)
+ * @returns The number of connected components in the graph
  */
 export declare function numberOfConnectedComponents(graph: Graph): number;
 /**
  * Check if the graph is connected (has exactly one connected component)
+ * @param graph - The input graph (must be undirected)
+ * @returns True if the graph is connected, false otherwise
  */
 export declare function isConnected(graph: Graph): boolean;
 /**
  * Find the largest connected component
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of node IDs in the largest connected component
  */
 export declare function largestConnectedComponent(graph: Graph): NodeId[];
 /**
  * Get the connected component containing a specific node
+ * @param graph - The input graph (must be undirected)
+ * @param nodeId - The node ID to find the component for
+ * @returns Array of node IDs in the same component as the specified node
  */
 export declare function getConnectedComponent(graph: Graph, nodeId: NodeId): NodeId[];
 /**
  * Find strongly connected components using Tarjan's algorithm
+ * @param graph - The input graph (must be directed)
+ * @returns Array of strongly connected components, each containing an array of node IDs
  */
 export declare function stronglyConnectedComponents(graph: Graph): NodeId[][];
 /**
  * Check if a directed graph is strongly connected
+ * @param graph - The input graph (must be directed)
+ * @returns True if the graph is strongly connected, false otherwise
  */
 export declare function isStronglyConnected(graph: Graph): boolean;
 /**
  * Find weakly connected components in a directed graph
  * (treat the graph as undirected for connectivity)
+ * @param graph - The input graph (must be directed)
+ * @returns Array of weakly connected components, each containing an array of node IDs
  */
 export declare function weaklyConnectedComponents(graph: Graph): NodeId[][];
 /**
  * Check if a directed graph is weakly connected
+ * @param graph - The input graph (must be directed)
+ * @returns True if the graph is weakly connected, false otherwise
  */
 export declare function isWeaklyConnected(graph: Graph): boolean;
 /**
  * Find condensation graph (quotient graph of strongly connected components)
+ * @param graph - The input graph (must be directed)
+ * @returns Object containing the condensed graph, component map, and component arrays
  */
 export declare function condensationGraph(graph: Graph): {
     condensedGraph: Graph;

package/dist/src/algorithms/components/connected.d.ts.map

@@ -1 +1 @@
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package/dist/src/algorithms/components/connected.js

@@ -7,6 +7,8 @@ import { UnionFind } from "../../data-structures/union-find.js";
  */
 /**
  * Find connected components in an undirected graph using Union-Find
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of connected components, each containing an array of node IDs
  */
 export function connectedComponents(graph) {
     if (graph.isDirected) {
@@ -25,6 +27,8 @@ export function connectedComponents(graph) {
 }
 /**
  * Find connected components using DFS (alternative implementation)
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of connected components, each containing an array of node IDs
  */
 export function connectedComponentsDFS(graph) {
     if (graph.isDirected) {
@@ -43,6 +47,10 @@ export function connectedComponentsDFS(graph) {
 }
 /**
  * DFS helper for connected components
+ * @param graph - The input graph
+ * @param nodeId - The starting node ID
+ * @param visited - Set of already visited node IDs
+ * @param component - Array to accumulate component members
  */
 function dfsComponent(graph, nodeId, visited, component) {
     visited.add(nodeId);
@@ -55,28 +63,37 @@ function dfsComponent(graph, nodeId, visited, component) {
 }
 /**
  * Find the number of connected components
+ * @param graph - The input graph (must be undirected)
+ * @returns The number of connected components in the graph
  */
 export function numberOfConnectedComponents(graph) {
     return connectedComponents(graph).length;
 }
 /**
  * Check if the graph is connected (has exactly one connected component)
+ * @param graph - The input graph (must be undirected)
+ * @returns True if the graph is connected, false otherwise
  */
 export function isConnected(graph) {
     return numberOfConnectedComponents(graph) <= 1;
 }
 /**
  * Find the largest connected component
+ * @param graph - The input graph (must be undirected)
+ * @returns Array of node IDs in the largest connected component
  */
 export function largestConnectedComponent(graph) {
     const components = connectedComponents(graph);
     if (components.length === 0) {
         return [];
     }
-    return components.reduce((largest, current) => current.length > largest.length ? current : largest);
+    return components.reduce((largest, current) => (current.length > largest.length ? current : largest));
 }
 /**
  * Get the connected component containing a specific node
+ * @param graph - The input graph (must be undirected)
+ * @param nodeId - The node ID to find the component for
+ * @returns Array of node IDs in the same component as the specified node
  */
 export function getConnectedComponent(graph, nodeId) {
     if (!graph.hasNode(nodeId)) {
@@ -92,6 +109,8 @@ export function getConnectedComponent(graph, nodeId) {
 }
 /**
  * Find strongly connected components using Tarjan's algorithm
+ * @param graph - The input graph (must be directed)
+ * @returns Array of strongly connected components, each containing an array of node IDs
  */
 export function stronglyConnectedComponents(graph) {
     if (!graph.isDirected) {
@@ -154,6 +173,8 @@ export function stronglyConnectedComponents(graph) {
 }
 /**
  * Check if a directed graph is strongly connected
+ * @param graph - The input graph (must be directed)
+ * @returns True if the graph is strongly connected, false otherwise
  */
 export function isStronglyConnected(graph) {
     if (!graph.isDirected) {
@@ -165,6 +186,8 @@ export function isStronglyConnected(graph) {
 /**
  * Find weakly connected components in a directed graph
  * (treat the graph as undirected for connectivity)
+ * @param graph - The input graph (must be directed)
+ * @returns Array of weakly connected components, each containing an array of node IDs
  */
 export function weaklyConnectedComponents(graph) {
     if (!graph.isDirected) {
@@ -183,6 +206,8 @@ export function weaklyConnectedComponents(graph) {
 }
 /**
  * Check if a directed graph is weakly connected
+ * @param graph - The input graph (must be directed)
+ * @returns True if the graph is weakly connected, false otherwise
  */
 export function isWeaklyConnected(graph) {
     if (!graph.isDirected) {
@@ -192,6 +217,8 @@ export function isWeaklyConnected(graph) {
 }
 /**
  * Find condensation graph (quotient graph of strongly connected components)
+ * @param graph - The input graph (must be directed)
+ * @returns Object containing the condensed graph, component map, and component arrays
  */
 export function condensationGraph(graph) {
     if (!graph.isDirected) {
@@ -216,8 +243,7 @@ export function condensationGraph(graph) {
     for (const edge of Array.from(graph.edges())) {
         const sourceComponent = componentMap.get(edge.source);
         const targetComponent = componentMap.get(edge.target);
-        if (sourceComponent !== undefined && targetComponent !== undefined &&
-            sourceComponent !== targetComponent) {
+        if (sourceComponent !== undefined && targetComponent !== undefined && sourceComponent !== targetComponent) {
             const edgeKey = `${String(sourceComponent)}-${String(targetComponent)}`;
             if (!addedEdges.has(edgeKey)) {
                 condensedGraph.addEdge(sourceComponent, targetComponent);