@grafema/mcp 0.2.11 → 0.3.0-beta

package/dist/dev-proxy.js

@@ -0,0 +1,267 @@
+#!/usr/bin/env node
+/**
+ * Grafema MCP Dev Proxy
+ *
+ * A thin stdio proxy that sits between Claude Code and the real MCP server.
+ * It transparently forwards all JSON-RPC messages, with two exceptions:
+ *
+ * 1. Intercepts `tools/call` with `name: "reload"` — kills and respawns the
+ *    child server process so it picks up new code from dist/ after `pnpm build`.
+ *
+ * 2. Injects a `reload` tool definition into `tools/list` responses from the
+ *    real server.
+ *
+ * Architecture:
+ *   Claude Code  <--stdio-->  dev-proxy  <--stdio-->  real server.js
+ *
+ * Usage in .claude/mcp.json:
+ *   {
+ *     "grafema-dev": {
+ *       "command": "node",
+ *       "args": ["packages/mcp/dist/dev-proxy.js", "--project", "/path/to/project"]
+ *     }
+ *   }
+ *
+ * The MCP SDK uses newline-delimited JSON framing (each message is a single
+ * JSON object followed by '\n'). No Content-Length headers.
+ */
+import { spawn } from 'node:child_process';
+import { dirname, join } from 'node:path';
+import { fileURLToPath } from 'node:url';
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = dirname(__filename);
+// ── Constants ──────────────────────────────────────────────────────────
+const RELOAD_TOOL_DEFINITION = {
+    name: 'reload',
+    description: 'Hot-reload the MCP server (restarts the process to pick up new dist/ code after pnpm build)',
+    inputSchema: { type: 'object', properties: {} },
+};
+/** Path to the real MCP server entry point (co-located in dist/) */
+const SERVER_SCRIPT = join(__dirname, 'server.js');
+/** All CLI args passed to this proxy are forwarded to the child server */
+const CHILD_ARGS = process.argv.slice(2);
+// ── Logging (stderr only — stdout is the JSON-RPC channel) ────────────
+function log(msg) {
+    process.stderr.write(`[dev-proxy] ${msg}\n`);
+}
+// ── Child Process Management ───────────────────────────────────────────
+let child = null;
+let childReady = false;
+/** Messages buffered while child is (re)starting */
+let pendingMessages = [];
+/** Track in-flight requests so we can send error responses on crash */
+const inflightRequests = new Map();
+/**
+ * Spawn the real MCP server as a child process.
+ * stdin/stdout are piped for JSON-RPC; stderr is inherited for debug logs.
+ */
+function spawnChild() {
+    log(`Spawning child: node ${SERVER_SCRIPT} ${CHILD_ARGS.join(' ')}`);
+    child = spawn('node', [SERVER_SCRIPT, ...CHILD_ARGS], {
+        stdio: ['pipe', 'pipe', 'inherit'],
+    });
+    childReady = true;
+    // ── Child stdout → proxy stdout (with tools/list injection) ──
+    let childBuffer = '';
+    child.stdout.on('data', (chunk) => {
+        childBuffer += chunk.toString('utf8');
+        // Process complete newline-delimited messages
+        let newlineIdx;
+        while ((newlineIdx = childBuffer.indexOf('\n')) !== -1) {
+            const line = childBuffer.slice(0, newlineIdx);
+            childBuffer = childBuffer.slice(newlineIdx + 1);
+            if (line.trim().length === 0)
+                continue;
+            try {
+                const msg = JSON.parse(line);
+                // Remove from in-flight tracking if this is a response
+                if ('id' in msg && msg.id !== undefined) {
+                    inflightRequests.delete(msg.id);
+                }
+                // Inject reload tool into tools/list responses
+                if (isToolsListResponse(msg)) {
+                    msg.result.tools.push(RELOAD_TOOL_DEFINITION);
+                }
+                process.stdout.write(JSON.stringify(msg) + '\n');
+            }
+            catch {
+                // If we can't parse it, forward raw (shouldn't happen with well-formed server)
+                process.stdout.write(line + '\n');
+            }
+        }
+    });
+    // ── Child exit handling ──
+    child.on('exit', (code, signal) => {
+        log(`Child exited: code=${code}, signal=${signal}`);
+        childReady = false;
+        // Send error responses for any in-flight requests
+        for (const [id] of inflightRequests) {
+            sendErrorResponse(id, -32000, 'MCP server process crashed');
+        }
+        inflightRequests.clear();
+        child = null;
+        // Auto-restart unless we're shutting down
+        if (!shuttingDown) {
+            log('Auto-restarting child in 500ms...');
+            setTimeout(() => {
+                spawnChild();
+                flushPendingMessages();
+            }, 500);
+        }
+    });
+    child.on('error', (err) => {
+        log(`Child spawn error: ${err.message}`);
+        childReady = false;
+        child = null;
+    });
+    // Flush any messages that arrived while child was restarting
+    flushPendingMessages();
+}
+function flushPendingMessages() {
+    if (!child || !childReady || pendingMessages.length === 0)
+        return;
+    log(`Flushing ${pendingMessages.length} pending message(s)`);
+    for (const msg of pendingMessages) {
+        child.stdin.write(msg + '\n');
+    }
+    pendingMessages = [];
+}
+function killChild() {
+    return new Promise((resolve) => {
+        if (!child) {
+            resolve();
+            return;
+        }
+        const c = child;
+        // Prevent auto-restart during intentional reload
+        const onExit = () => {
+            child = null;
+            childReady = false;
+            resolve();
+        };
+        c.once('exit', onExit);
+        c.kill('SIGTERM');
+        // Force kill after 3 seconds
+        setTimeout(() => {
+            if (c.exitCode === null && c.signalCode === null) {
+                log('Child did not exit after SIGTERM, sending SIGKILL');
+                c.kill('SIGKILL');
+            }
+        }, 3000);
+    });
+}
+function isToolsCallReload(msg) {
+    return (msg.method === 'tools/call' &&
+        msg.params != null &&
+        msg.params.name === 'reload');
+}
+function isToolsListResponse(msg) {
+    const m = msg;
+    if (!m || typeof m !== 'object')
+        return false;
+    if (!('result' in m) || !m.result)
+        return false;
+    const result = m.result;
+    return Array.isArray(result.tools);
+}
+function sendSuccessResponse(id, result) {
+    const response = {
+        jsonrpc: '2.0',
+        id,
+        result,
+    };
+    process.stdout.write(JSON.stringify(response) + '\n');
+}
+function sendErrorResponse(id, code, message) {
+    const response = {
+        jsonrpc: '2.0',
+        id,
+        error: { code, message },
+    };
+    process.stdout.write(JSON.stringify(response) + '\n');
+}
+// ── Reload Handler ─────────────────────────────────────────────────────
+async function handleReload(requestId) {
+    log('Reload requested — restarting child process...');
+    try {
+        // Suppress auto-restart during intentional kill
+        shuttingDown = true;
+        await killChild();
+        shuttingDown = false;
+        spawnChild();
+        sendSuccessResponse(requestId, {
+            content: [
+                {
+                    type: 'text',
+                    text: 'MCP server reloaded successfully. New dist/ code is now active.',
+                },
+            ],
+        });
+    }
+    catch (err) {
+        shuttingDown = false;
+        const message = err instanceof Error ? err.message : String(err);
+        log(`Reload failed: ${message}`);
+        sendErrorResponse(requestId, -32000, `Reload failed: ${message}`);
+    }
+}
+// ── Main: stdin → child (with reload interception) ─────────────────────
+let shuttingDown = false;
+let stdinBuffer = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => {
+    stdinBuffer += chunk;
+    let newlineIdx;
+    while ((newlineIdx = stdinBuffer.indexOf('\n')) !== -1) {
+        const line = stdinBuffer.slice(0, newlineIdx);
+        stdinBuffer = stdinBuffer.slice(newlineIdx + 1);
+        if (line.trim().length === 0)
+            continue;
+        try {
+            const msg = JSON.parse(line);
+            // Intercept reload tool call
+            if (msg.method === 'tools/call' && isToolsCallReload(msg)) {
+                if (msg.id !== undefined) {
+                    void handleReload(msg.id);
+                }
+                continue;
+            }
+            // Track request IDs for crash error responses
+            if ('id' in msg && msg.id !== undefined && 'method' in msg) {
+                inflightRequests.set(msg.id, true);
+            }
+            // Forward to child
+            if (child && childReady) {
+                child.stdin.write(line + '\n');
+            }
+            else {
+                pendingMessages.push(line);
+            }
+        }
+        catch {
+            // Not valid JSON — forward raw (shouldn't happen with well-formed client)
+            if (child && childReady) {
+                child.stdin.write(line + '\n');
+            }
+            else {
+                pendingMessages.push(line);
+            }
+        }
+    }
+});
+// ── Graceful Shutdown ──────────────────────────────────────────────────
+async function shutdown() {
+    if (shuttingDown)
+        return;
+    shuttingDown = true;
+    log('Shutting down...');
+    await killChild();
+    process.exit(0);
+}
+process.on('SIGINT', () => void shutdown());
+process.on('SIGTERM', () => void shutdown());
+process.stdin.on('end', () => void shutdown());
+// ── Start ──────────────────────────────────────────────────────────────
+log('Dev proxy starting');
+spawnChild();
+//# sourceMappingURL=dev-proxy.js.map

package/dist/dev-proxy.js.map

@@ -0,0 +1 @@
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package/dist/handlers/analysis-handlers.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"analysis-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/analysis-handlers.ts"],"names":[],"mappings":"AAAA;;GAEG;AAQH,OAAO,KAAK,EACV,UAAU,EACV,kBAAkB,EAClB,aAAa,EACd,MAAM,aAAa,CAAC;AAIrB,wBAAsB,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,GAAG,OAAO,CAAC,UAAU,CAAC,CA6BxF;AAED,wBAAsB,uBAAuB,IAAI,OAAO,CAAC,UAAU,CAAC,CAYnE;AAED,wBAAsB,cAAc,IAAI,OAAO,CAAC,UAAU,CAAC,CAe1D;AAED,wBAAsB,eAAe,CAAC,IAAI,EAAE,aAAa,GAAG,OAAO,CAAC,UAAU,CAAC,CAwB9E"}
+{"version":3,"file":"analysis-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/analysis-handlers.ts"],"names":[],"mappings":"AAAA;;GAEG;AAQH,OAAO,KAAK,EACV,UAAU,EACV,kBAAkB,EAClB,aAAa,EACd,MAAM,aAAa,CAAC;AAKrB,wBAAsB,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,GAAG,OAAO,CAAC,UAAU,CAAC,CA6BxF;AAED,wBAAsB,uBAAuB,IAAI,OAAO,CAAC,UAAU,CAAC,CAYnE;AAED,wBAAsB,cAAc,IAAI,OAAO,CAAC,UAAU,CAAC,CA6C1D;AAED,wBAAsB,eAAe,CAAC,IAAI,EAAE,aAAa,GAAG,OAAO,CAAC,UAAU,CAAC,CAwB9E"}

package/dist/handlers/analysis-handlers.js

@@ -2,7 +2,7 @@
  * MCP Analysis Handlers
  */
 import { ensureAnalyzed } from '../analysis.js';
-import { getAnalysisStatus, getOrCreateBackend, isAnalysisRunning } from '../state.js';
+import { getAnalysisStatus, isAnalysisRunning } from '../state.js';
 import { textResult, errorResult, } from '../utils.js';
 // === ANALYSIS HANDLERS ===
 export async function handleAnalyzeProject(args) {
@@ -39,19 +39,49 @@ export async function handleGetAnalysisStatus() {
         (status.error ? `- Error: ${status.error}\n` : ''));
 }
 export async function handleGetStats() {
-    const db = await getOrCreateBackend();
+    const db = await ensureAnalyzed();
     const nodeCount = await db.nodeCount();
     const edgeCount = await db.edgeCount();
     const nodesByType = await db.countNodesByType();
     const edgesByType = await db.countEdgesByType();
+    let shardSection = '';
+    if ('getServerStats' in db && typeof db.getServerStats === 'function') {
+        try {
+            const stats = await db.getServerStats();
+            if (stats.shardDiagnostics?.length > 0) {
+                shardSection = `\nShard Diagnostics (${stats.shardDiagnostics.length} shards):\n`;
+                for (const s of stats.shardDiagnostics) {
+                    const parts = [
+                        `nodes=${s.nodeCount}`,
+                        `edges=${s.edgeCount}`,
+                        `wb=${s.writeBufferNodes}/${s.writeBufferEdges}`,
+                        s.compacted ? `compacted (L1: ${s.l1NodeRecords}n/${s.l1EdgeRecords}e)` : `L0: ${s.l0NodeSegmentCount}n/${s.l0EdgeSegmentCount}e segs`,
+                    ];
+                    if (s.tombstoneNodeCount > 0 || s.tombstoneEdgeCount > 0) {
+                        parts.push(`tombstones=${s.tombstoneNodeCount}n/${s.tombstoneEdgeCount}e`);
+                    }
+                    const indexes = [s.hasL1ByType && 'type', s.hasL1ByFile && 'file', s.hasL1ByName && 'name'].filter(Boolean);
+                    if (indexes.length > 0) {
+                        parts.push(`indexes=[${indexes.join(',')}]`);
+                    }
+                    shardSection += `  shard ${s.shardId}: ${parts.join(', ')}\n`;
+                }
+                shardSection += `\nServer: uptime=${stats.uptimeSecs}s, queries=${stats.queryCount}, memory=${stats.memoryPercent.toFixed(1)}%`;
+            }
+        }
+        catch {
+            // Server may not support getStats yet — skip diagnostics
+        }
+    }
     return textResult(`Graph Statistics:\n\n` +
         `Total nodes: ${nodeCount.toLocaleString()}\n` +
         `Total edges: ${edgeCount.toLocaleString()}\n\n` +
         `Nodes by type:\n${JSON.stringify(nodesByType, null, 2)}\n\n` +
-        `Edges by type:\n${JSON.stringify(edgesByType, null, 2)}`);
+        `Edges by type:\n${JSON.stringify(edgesByType, null, 2)}` +
+        shardSection);
 }
 export async function handleGetSchema(args) {
-    const db = await getOrCreateBackend();
+    const db = await ensureAnalyzed();
     const { type = 'all' } = args;
     const nodesByType = await db.countNodesByType();
     const edgesByType = await db.countEdgesByType();

package/dist/handlers/analysis-handlers.js.map

@@ -1 +1 @@
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package/dist/handlers/context-handlers.d.ts

@@ -5,12 +5,11 @@ import type { ToolResult, GetFunctionDetailsArgs, GetContextArgs, GetFileOvervie
 /**
  * Get comprehensive function details including calls made and callers.
  *
- * Graph structure:
- * ```
- * FUNCTION -[HAS_SCOPE]-> SCOPE -[CONTAINS]-> CALL/METHOD_CALL
- *                         SCOPE -[CONTAINS]-> SCOPE (nested blocks)
- * CALL -[CALLS]-> FUNCTION (target)
- * ```
+ * Supports two graph layouts (see findCallsInFunction for details):
+ * - Layout A: FUNCTION -> HAS_SCOPE -> SCOPE -> CONTAINS -> CALL (legacy)
+ * - Layout B: FUNCTION -> AWAITS|RETURNS|THROWS -> CALL (Rust orchestrator)
+ *
+ * In both layouts: CALL -[CALLS]-> FUNCTION (target)
  *
  * This is the core tool for understanding function behavior.
  * Use transitive=true to follow call chains (A -> B -> C).

package/dist/handlers/context-handlers.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"context-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/context-handlers.ts"],"names":[],"mappings":"AAAA;;GAEG;AAaH,OAAO,KAAK,EACV,UAAU,EACV,sBAAsB,EACtB,cAAc,EACd,mBAAmB,EAEpB,MAAM,aAAa,CAAC;AAIrB;;;;;;;;;;;;GAYG;AACH,wBAAsB,wBAAwB,CAC5C,IAAI,EAAE,sBAAsB,GAC3B,OAAO,CAAC,UAAU,CAAC,CA6ErB;AA+CD,wBAAsB,gBAAgB,CACpC,IAAI,EAAE,cAAc,GACnB,OAAO,CAAC,UAAU,CAAC,CAkIrB;AAID,wBAAsB,qBAAqB,CACzC,IAAI,EAAE,mBAAmB,GACxB,OAAO,CAAC,UAAU,CAAC,CA2GrB"}
+{"version":3,"file":"context-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/context-handlers.ts"],"names":[],"mappings":"AAAA;;GAEG;AAaH,OAAO,KAAK,EACV,UAAU,EACV,sBAAsB,EACtB,cAAc,EACd,mBAAmB,EAEpB,MAAM,aAAa,CAAC;AAIrB;;;;;;;;;;;GAWG;AACH,wBAAsB,wBAAwB,CAC5C,IAAI,EAAE,sBAAsB,GAC3B,OAAO,CAAC,UAAU,CAAC,CA+ErB;AA+CD,wBAAsB,gBAAgB,CACpC,IAAI,EAAE,cAAc,GACnB,OAAO,CAAC,UAAU,CAAC,CAqIrB;AAID,wBAAsB,qBAAqB,CACzC,IAAI,EAAE,mBAAmB,GACxB,OAAO,CAAC,UAAU,CAAC,CA2GrB"}

package/dist/handlers/context-handlers.js

@@ -3,7 +3,7 @@
  */
 import { ensureAnalyzed } from '../analysis.js';
 import { getProjectPath } from '../state.js';
-import { findCallsInFunction, findContainingFunction, FileOverview, buildNodeContext, getNodeDisplayName, formatEdgeMetadata, STRUCTURAL_EDGE_TYPES } from '@grafema/core';
+import { findCallsInFunction, findContainingFunction, FileOverview, buildNodeContext, getNodeDisplayName, formatEdgeMetadata, STRUCTURAL_EDGE_TYPES, isGrafemaUri, toCompactSemanticId } from '@grafema/util';
 import { existsSync, readFileSync, realpathSync } from 'fs';
 import { isAbsolute, join, relative } from 'path';
 import { serializeBigInt, textResult, errorResult, } from '../utils.js';
@@ -11,12 +11,11 @@ import { serializeBigInt, textResult, errorResult, } from '../utils.js';
 /**
  * Get comprehensive function details including calls made and callers.
  *
- * Graph structure:
- * ```
- * FUNCTION -[HAS_SCOPE]-> SCOPE -[CONTAINS]-> CALL/METHOD_CALL
- *                         SCOPE -[CONTAINS]-> SCOPE (nested blocks)
- * CALL -[CALLS]-> FUNCTION (target)
- * ```
+ * Supports two graph layouts (see findCallsInFunction for details):
+ * - Layout A: FUNCTION -> HAS_SCOPE -> SCOPE -> CONTAINS -> CALL (legacy)
+ * - Layout B: FUNCTION -> AWAITS|RETURNS|THROWS -> CALL (Rust orchestrator)
+ *
+ * In both layouts: CALL -[CALLS]-> FUNCTION (target)
  *
  * This is the core tool for understanding function behavior.
  * Use transitive=true to follow call chains (A -> B -> C).
@@ -24,14 +23,16 @@ import { serializeBigInt, textResult, errorResult, } from '../utils.js';
 export async function handleGetFunctionDetails(args) {
     const db = await ensureAnalyzed();
     const { name, file, transitive = false } = args;
-    // Step 1: Find the function
+    // Step 1: Find the function (search both FUNCTION and METHOD nodes)
     const candidates = [];
-    for await (const node of db.queryNodes({ type: 'FUNCTION' })) {
-        if (node.name !== name)
-            continue;
-        if (file && !node.file?.includes(file))
-            continue;
-        candidates.push(node);
+    for (const nodeType of ['FUNCTION', 'METHOD']) {
+        for await (const node of db.queryNodes({ type: nodeType })) {
+            if (node.name !== name)
+                continue;
+            if (file && !node.file?.includes(file))
+                continue;
+            candidates.push(node);
+        }
     }
     if (candidates.length === 0) {
         return errorResult(`Function "${name}" not found.` +
@@ -126,10 +127,12 @@ function formatCallsForDisplay(calls) {
 export async function handleGetContext(args) {
     const db = await ensureAnalyzed();
     const { semanticId, contextLines: ctxLines = 3, edgeType } = args;
+    // Accept both grafema:// URI and compact format
+    const displayId = isGrafemaUri(semanticId) ? toCompactSemanticId(semanticId) : semanticId;
     // 1. Look up node
     const node = await db.getNode(semanticId);
     if (!node) {
-        return errorResult(`Node not found: "${semanticId}"\n` +
+        return errorResult(`Node not found: "${displayId}"\n` +
             `Use find_nodes or query_graph to find the correct semantic ID.`);
     }
     const edgeTypeFilter = edgeType
@@ -262,7 +265,7 @@ export async function handleGetFileOverview(args) {
     const relativePath = relative(projectPath, absolutePath);
     try {
         const overview = new FileOverview(db);
-        const result = await overview.getOverview(absolutePath, {
+        const result = await overview.getOverview(relativePath, {
             includeEdges,
         });
         result.file = relativePath;

package/dist/handlers/context-handlers.js.map

@@ -1 +1 @@
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package/dist/handlers/coverage-handlers.js

@@ -2,7 +2,7 @@
  * MCP Coverage Handlers
  */
 import { getOrCreateBackend, getProjectPath } from '../state.js';
-import { CoverageAnalyzer } from '@grafema/core';
+import { CoverageAnalyzer } from '@grafema/util';
 import { textResult, errorResult, } from '../utils.js';
 // === COVERAGE ===
 export async function handleGetCoverage(args) {

package/dist/handlers/dataflow-handlers.d.ts

@@ -1,5 +1,7 @@
 /**
  * MCP Dataflow Handlers
+ *
+ * Delegates BFS tracing to @grafema/util's shared traceDataflow module.
  */
 import type { ToolResult, TraceAliasArgs, TraceDataFlowArgs, CheckInvariantArgs } from '../types.js';
 export declare function handleTraceAlias(args: TraceAliasArgs): Promise<ToolResult>;

package/dist/handlers/dataflow-handlers.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"dataflow-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/dataflow-handlers.ts"],"names":[],"mappings":"AAAA;;GAEG;AASH,OAAO,KAAK,EACV,UAAU,EACV,cAAc,EACd,iBAAiB,EACjB,kBAAkB,EAEnB,MAAM,aAAa,CAAC;AAIrB,wBAAsB,gBAAgB,CAAC,IAAI,EAAE,cAAc,GAAG,OAAO,CAAC,UAAU,CAAC,CA2DhF;AAED,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,iBAAiB,GAAG,OAAO,CAAC,UAAU,CAAC,CA+DtF;AAED,wBAAsB,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,GAAG,OAAO,CAAC,UAAU,CAAC,CA6CxF"}
+{"version":3,"file":"dataflow-handlers.d.ts","sourceRoot":"","sources":["../../src/handlers/dataflow-handlers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAUH,OAAO,KAAK,EACV,UAAU,EACV,cAAc,EACd,iBAAiB,EACjB,kBAAkB,EAEnB,MAAM,aAAa,CAAC;AAUrB,wBAAsB,gBAAgB,CAAC,IAAI,EAAE,cAAc,GAAG,OAAO,CAAC,UAAU,CAAC,CAqEhF;AAID,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,iBAAiB,GAAG,OAAO,CAAC,UAAU,CAAC,CAoDtF;AAID,wBAAsB,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,GAAG,OAAO,CAAC,UAAU,CAAC,CAmDxF"}