@grackle-ai/database 0.84.1 → 0.85.1

package/dist/db.d.ts

@@ -1,15 +1,8 @@
 import Database from "better-sqlite3";
 import type { BetterSQLite3Database } from "drizzle-orm/better-sqlite3";
 import * as schema from "./schema.js";
-/** Error collected from a migration step that uses try-catch for idempotency. */
-export interface MigrationError {
-    name: string;
-    error: unknown;
-}
-/** Result returned by {@link initDatabase}. */
-export interface InitDatabaseResult {
-    migrationErrors: MigrationError[];
-}
+/** The highest schema version defined by BASELINE + MIGRATIONS. */
+declare const CURRENT_VERSION: number;
 /** Raw better-sqlite3 instance. Available after {@link openDatabase} has been called. */
 declare let sqlite: InstanceType<typeof Database> | undefined;
 /**
@@ -30,14 +23,16 @@ declare let db: BetterSQLite3Database<typeof schema> & {
  */
 export declare function openDatabase(dbPath?: string): void;
 /**
- * Initialize all database tables and run migrations.
+ * Initialize all database tables and run any pending migrations.
  * Call once at startup after {@link openDatabase}, or pass an in-memory
  * SQLite instance for testing.
  *
+ * Uses `PRAGMA user_version` to track schema versions. Each migration runs
+ * exactly once, in order, inside a transaction.
+ *
  * @param sqliteOverride - Optional SQLite instance to use instead of the module-level one.
- * @returns Collected migration errors from idempotent try-catch steps.
  */
-export declare function initDatabase(sqliteOverride?: InstanceType<typeof Database>): InitDatabaseResult;
-export { sqlite };
+export declare function initDatabase(sqliteOverride?: InstanceType<typeof Database>): void;
+export { sqlite, CURRENT_VERSION };
 export { db as default };
 //# sourceMappingURL=db.d.ts.map

package/dist/db.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../src/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AAEtC,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,4BAA4B,CAAC;AAKxE,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;AA6BtC,mEAAmE;AACnE,QAAA,MAAM,eAAe,EAAE,MAEH,CAAC;AA8CrB,yFAAyF;AACzF,QAAA,IAAI,MAAM,EAAE,YAAY,CAAC,OAAO,QAAQ,CAAC,GAAG,SAAS,CAAC;AAEtD;;;;;GAKG;AACH,QAAA,IAAI,EAAE,EAAG,qBAAqB,CAAC,OAAO,MAAM,CAAC,GAAG;IAC9C,OAAO,EAAE,YAAY,CAAC,OAAO,QAAQ,CAAC,CAAC;CACxC,CAAC;AAEF;;;;;;GAMG;AACH,wBAAgB,YAAY,CAAC,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAsElD;AAED;;;;;;;;;GASG;AACH,wBAAgB,YAAY,CAAC,cAAc,CAAC,EAAE,YAAY,CAAC,OAAO,QAAQ,CAAC,GAAG,IAAI,CAsMjF;AAED,OAAO,EAAE,MAAM,EAAE,eAAe,EAAE,CAAC;AACnC,OAAO,EAAE,EAAE,IAAI,OAAO,EAAE,CAAC"}

package/dist/db.js

@@ -5,6 +5,59 @@ import { mkdirSync } from "node:fs";
 import { DB_FILENAME } from "@grackle-ai/common";
 import { grackleHome } from "./paths.js";
 import * as schema from "./schema.js";
+// ─── Schema Versioning ──────────────────────────────────────
+/**
+ * Schema version representing the consolidated baseline.
+ * All historical migrations (pre-versioning) are collapsed into this version.
+ */
+const BASELINE_VERSION = 1;
+/**
+ * Ordered list of versioned migrations.
+ * Add new migrations to the end with incrementing version numbers.
+ */
+const MIGRATIONS = [
+// Future migrations go here, e.g.:
+// { version: 2, name: "add-foo-to-bar", up: (conn) => { conn.exec("ALTER TABLE ..."); } },
+];
+/** The highest schema version defined by BASELINE + MIGRATIONS. */
+const CURRENT_VERSION = MIGRATIONS.length > 0
+    ? MIGRATIONS[MIGRATIONS.length - 1].version
+    : BASELINE_VERSION;
+// ─── Legacy Schema Validation ───────────────────────────────
+/**
+ * Columns that must exist in a database to be considered baseline-compatible.
+ * These were added at various points during the historical migration sequence.
+ */
+const BASELINE_SCHEMA_CHECKS = [
+    { table: "sessions", column: "cost_usd" },
+    { table: "tasks", column: "schedule_id" },
+    { table: "workspaces", column: "working_directory" },
+];
+/**
+ * Verify that an unversioned database has all columns expected by the baseline schema.
+ * Throws if tables exist but are missing columns, indicating the database predates
+ * historical migrations that have been removed.
+ */
+function validateBaselineSchema(conn) {
+    const tables = conn
+        .prepare("SELECT name FROM sqlite_master WHERE type = 'table' AND name NOT LIKE 'sqlite_%'")
+        .all();
+    // No tables = fresh install, nothing to validate
+    if (tables.length === 0) {
+        return;
+    }
+    for (const { table, column } of BASELINE_SCHEMA_CHECKS) {
+        const cols = conn
+            .prepare(`PRAGMA table_info(${table})`)
+            .all();
+        // Table exists but is missing a required column
+        if (cols.length > 0 && !cols.some((c) => c.name === column)) {
+            throw new Error(`Database schema is too old: table "${table}" is missing column "${column}". ` +
+                `Delete your database file and restart to create a fresh one.`);
+        }
+    }
+}
+// ─── Database Singleton ─────────────────────────────────────
 /** Raw better-sqlite3 instance. Available after {@link openDatabase} has been called. */
 let sqlite;
 /**
@@ -84,66 +137,33 @@ export function openDatabase(dbPath) {
     db = drizzle(sqlite, { schema });
 }
 /**
- * Initialize all database tables and run migrations.
+ * Initialize all database tables and run any pending migrations.
  * Call once at startup after {@link openDatabase}, or pass an in-memory
  * SQLite instance for testing.
  *
+ * Uses `PRAGMA user_version` to track schema versions. Each migration runs
+ * exactly once, in order, inside a transaction.
+ *
  * @param sqliteOverride - Optional SQLite instance to use instead of the module-level one.
- * @returns Collected migration errors from idempotent try-catch steps.
  */
 export function initDatabase(sqliteOverride) {
     const conn = sqliteOverride ?? sqlite;
     if (!conn) {
         throw new Error("Database not initialized. Call openDatabase() first or provide a sqliteOverride.");
     }
-    const migrationErrors = [];
-    /** Check whether an error is an expected idempotent migration failure. */
-    const isExpectedIdempotencyError = (err) => {
-        if (!(err instanceof Error)) {
-            return false;
-        }
-        const msg = err.message.toLowerCase();
-        return (msg.includes("already exists") ||
-            msg.includes("duplicate column name") ||
-            msg.includes("no such table") ||
-            msg.includes("no such column"));
-    };
-    /** Run a migration step, collecting expected idempotency errors. */
-    const tryMigration = (name, fn) => {
-        try {
-            fn();
-        }
-        catch (error) {
-            if (isExpectedIdempotencyError(error)) {
-                migrationErrors.push({ name, error });
-            }
-            else {
-                throw error;
-            }
-        }
-    };
-    // Migration: rename projects table to workspaces
-    tryMigration("rename-projects-to-workspaces", () => {
-        conn.exec("ALTER TABLE projects RENAME TO workspaces");
-    });
-    // Migration: rename project_id column to workspace_id on tasks
-    tryMigration("rename-tasks-project-id", () => {
-        conn.exec("ALTER TABLE tasks RENAME COLUMN project_id TO workspace_id");
-    });
-    // Migration: rename project_id column to workspace_id on findings
-    tryMigration("rename-findings-project-id", () => {
-        conn.exec("ALTER TABLE findings RENAME COLUMN project_id TO workspace_id");
-    });
-    // Migration: drop old findings index after column rename
-    tryMigration("drop-idx-findings-project", () => {
-        conn.exec("DROP INDEX IF EXISTS idx_findings_project");
-    });
-    // Migration: rename default_env_id → environment_id on workspaces
-    // Must run BEFORE the backfill block below which references environment_id.
-    tryMigration("rename-workspaces-default-env-id", () => {
-        conn.exec("ALTER TABLE workspaces RENAME COLUMN default_env_id TO environment_id");
-    });
-    // Create tables — idempotent, safe to run every startup
+    // Check current schema version before creating tables — an ancient database
+    // with missing columns would cause index creation to fail with a confusing error.
+    const currentVersion = conn.pragma("user_version", { simple: true });
+    // Prevent running an older binary against a database upgraded by a newer version.
+    if (currentVersion > CURRENT_VERSION) {
+        throw new Error(`Database schema version (${currentVersion}) is newer than this application supports (${CURRENT_VERSION}). ` +
+            "Please upgrade the application or use a compatible database file.");
+    }
+    if (currentVersion < BASELINE_VERSION) {
+        validateBaselineSchema(conn);
+    }
+    // Create all tables and indices — IF NOT EXISTS makes this safe for both
+    // fresh installs and existing databases.
     conn.exec(`
     CREATE TABLE IF NOT EXISTS environments (
       id            TEXT PRIMARY KEY,
@@ -175,7 +195,13 @@ export function initDatabase(sqliteOverride) {
       end_reason    TEXT,
       error         TEXT,
       task_id       TEXT NOT NULL DEFAULT '',
-      persona_id    TEXT NOT NULL DEFAULT ''
+      persona_id    TEXT NOT NULL DEFAULT '',
+      parent_session_id TEXT NOT NULL DEFAULT '',
+      pipe_mode     TEXT NOT NULL DEFAULT '',
+      input_tokens  INTEGER NOT NULL DEFAULT 0,
+      output_tokens INTEGER NOT NULL DEFAULT 0,
+      cost_usd      REAL NOT NULL DEFAULT 0,
+      sigterm_sent_at TEXT
     );
 
     CREATE TABLE IF NOT EXISTS tokens (
@@ -192,6 +218,8 @@ export function initDatabase(sqliteOverride) {
       environment_id TEXT NOT NULL DEFAULT '' REFERENCES environments(id),
       status        TEXT NOT NULL DEFAULT 'active',
       use_worktrees INTEGER NOT NULL DEFAULT 1,
+      working_directory TEXT NOT NULL DEFAULT '',
+      default_persona_id TEXT NOT NULL DEFAULT '',
       created_at    TEXT NOT NULL DEFAULT (datetime('now')),
       updated_at    TEXT NOT NULL DEFAULT (datetime('now'))
     );
@@ -239,6 +267,9 @@ export function initDatabase(sqliteOverride) {
       model         TEXT NOT NULL DEFAULT '',
       max_turns     INTEGER NOT NULL DEFAULT 0,
       mcp_servers   TEXT NOT NULL DEFAULT '[]',
+      type          TEXT NOT NULL DEFAULT 'agent',
+      script        TEXT NOT NULL DEFAULT '',
+      allowed_mcp_tools TEXT NOT NULL DEFAULT '[]',
       created_at    TEXT NOT NULL DEFAULT (datetime('now')),
       updated_at    TEXT NOT NULL DEFAULT (datetime('now'))
     );
@@ -248,8 +279,6 @@ export function initDatabase(sqliteOverride) {
       value TEXT NOT NULL
     );
 
-    CREATE INDEX IF NOT EXISTS idx_findings_workspace ON findings(workspace_id);
-
     CREATE TABLE IF NOT EXISTS domain_events (
       id        TEXT PRIMARY KEY,
       type      TEXT NOT NULL,
@@ -257,247 +286,6 @@ export function initDatabase(sqliteOverride) {
       payload   TEXT NOT NULL
     );
 
-    CREATE INDEX IF NOT EXISTS idx_domain_events_type ON domain_events(type);
-    CREATE INDEX IF NOT EXISTS idx_domain_events_timestamp ON domain_events(timestamp);
-  `);
-    // Migration: add powerline_token column if missing (older databases)
-    tryMigration("add-environments-powerline-token", () => {
-        conn.exec("ALTER TABLE environments ADD COLUMN powerline_token TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: rename sidecar_token → powerline_token (from older databases)
-    tryMigration("rename-environments-sidecar-token", () => {
-        conn.exec("ALTER TABLE environments RENAME COLUMN sidecar_token TO powerline_token");
-    });
-    // Migration: backfill NULLs in stage-2 tables from older schemas that lacked NOT NULL
-    conn.exec(`
-    UPDATE workspaces SET description = '' WHERE description IS NULL;
-    UPDATE workspaces SET repo_url = '' WHERE repo_url IS NULL;
-    UPDATE workspaces SET environment_id = COALESCE(
-      (SELECT id FROM environments LIMIT 1), ''
-    ) WHERE environment_id IS NULL OR environment_id = '';
-    UPDATE workspaces SET status = 'active' WHERE status IS NULL;
-    UPDATE workspaces SET created_at = datetime('now') WHERE created_at IS NULL;
-    UPDATE workspaces SET updated_at = datetime('now') WHERE updated_at IS NULL;
-
-    UPDATE tasks SET description = '' WHERE description IS NULL;
-    UPDATE tasks SET status = 'not_started' WHERE status IS NULL;
-    UPDATE tasks SET branch = '' WHERE branch IS NULL;
-    UPDATE tasks SET depends_on = '[]' WHERE depends_on IS NULL;
-    UPDATE tasks SET created_at = datetime('now') WHERE created_at IS NULL;
-    UPDATE tasks SET updated_at = datetime('now') WHERE updated_at IS NULL;
-    UPDATE tasks SET sort_order = 0 WHERE sort_order IS NULL;
-
-    UPDATE findings SET task_id = '' WHERE task_id IS NULL;
-    UPDATE findings SET session_id = '' WHERE session_id IS NULL;
-    UPDATE findings SET category = 'general' WHERE category IS NULL;
-    UPDATE findings SET tags = '[]' WHERE tags IS NULL;
-    UPDATE findings SET created_at = datetime('now') WHERE created_at IS NULL;
-  `);
-    // Migration: add parent_task_id and depth columns if missing (older databases)
-    tryMigration("add-tasks-parent-task-id", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN parent_task_id TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-tasks-depth", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN depth INTEGER NOT NULL DEFAULT 0");
-    });
-    // Migration: add can_decompose column if missing (older databases)
-    tryMigration("add-tasks-can-decompose", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN can_decompose INTEGER NOT NULL DEFAULT 0");
-        // Backfill: mark root tasks and tasks with existing children as decomposable
-        conn.exec(`
-      UPDATE tasks
-      SET can_decompose = 1
-      WHERE parent_task_id IS NULL OR parent_task_id = ''
-        OR id IN (
-          SELECT DISTINCT parent_task_id
-          FROM tasks
-          WHERE parent_task_id IS NOT NULL AND parent_task_id <> ''
-        )
-    `);
-    });
-    // Migration: add persona_id column to tasks if missing
-    tryMigration("add-tasks-persona-id", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN persona_id TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: add task_id column to sessions if missing
-    tryMigration("add-sessions-task-id", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN task_id TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: add use_worktrees column to workspaces if missing (older databases)
-    tryMigration("add-workspaces-use-worktrees", () => {
-        conn.exec("ALTER TABLE workspaces ADD COLUMN use_worktrees INTEGER NOT NULL DEFAULT 1");
-    });
-    // Migration: add worktree_base_path column to workspaces if missing (older databases)
-    // NOTE: column was later renamed to working_directory — see rename-worktree-base-path migration below.
-    tryMigration("add-workspaces-worktree-base-path", () => {
-        conn.exec("ALTER TABLE workspaces ADD COLUMN worktree_base_path TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: backfill task_id on existing sessions from tasks.session_id.
-    // Guard with try/catch since session_id column may have been dropped already.
-    tryMigration("backfill-sessions-task-id", () => {
-        conn.exec(`
-      UPDATE sessions SET task_id = (
-        SELECT id FROM tasks WHERE tasks.session_id = sessions.id LIMIT 1
-      ) WHERE task_id = '' AND EXISTS (
-        SELECT 1 FROM tasks WHERE tasks.session_id = sessions.id
-      )
-    `);
-    });
-    // Migration: add persona_id column to sessions if missing
-    tryMigration("add-sessions-persona-id", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN persona_id TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: copy persona_id from tasks to sessions before dropping
-    tryMigration("copy-persona-id-tasks-to-sessions", () => {
-        conn.exec(`
-      UPDATE sessions SET persona_id = (
-        SELECT persona_id FROM tasks WHERE tasks.session_id = sessions.id LIMIT 1
-      ) WHERE persona_id = '' AND task_id != ''
-    `);
-    });
-    // Migration: drop columns that moved off the tasks table
-    tryMigration("drop-tasks-session-id", () => {
-        conn.exec("ALTER TABLE tasks DROP COLUMN session_id");
-    });
-    tryMigration("drop-tasks-env-id", () => {
-        conn.exec("ALTER TABLE tasks DROP COLUMN env_id");
-    });
-    tryMigration("drop-tasks-persona-id", () => {
-        conn.exec("ALTER TABLE tasks DROP COLUMN persona_id");
-    });
-    // Migration: normalize existing started_at values from SQLite datetime('now')
-    // format (YYYY-MM-DD HH:MM:SS) to ISO 8601 (YYYY-MM-DDTHH:MM:SS.000Z) so
-    // ordering is consistent with newly inserted rows.
-    conn.exec(`
-    UPDATE sessions
-    SET started_at = replace(started_at, ' ', 'T') || '.000Z'
-    WHERE started_at NOT LIKE '%T%'
-  `);
-    // Migration: normalize task statuses to simplified model
-    conn.exec(`
-    UPDATE tasks SET status = 'not_started' WHERE status IN ('pending', 'assigned');
-    UPDATE tasks SET status = 'complete' WHERE status = 'done';
-    UPDATE tasks SET status = 'not_started' WHERE status IN ('in_progress', 'waiting_input', 'review');
-  `);
-    // Migration: normalize session statuses
-    conn.exec(`
-    UPDATE sessions SET status = 'idle' WHERE status = 'waiting_input';
-    UPDATE sessions SET status = 'interrupted' WHERE status = 'killed';
-  `);
-    // Migration: drop stale columns from tasks
-    tryMigration("drop-tasks-assigned-at", () => {
-        conn.exec("ALTER TABLE tasks DROP COLUMN assigned_at");
-    });
-    tryMigration("drop-tasks-review-notes", () => {
-        conn.exec("ALTER TABLE tasks DROP COLUMN review_notes");
-    });
-    // Index for efficient session-by-task lookups
-    conn.exec("CREATE INDEX IF NOT EXISTS idx_sessions_task_id ON sessions(task_id)");
-    // Migration: add default_persona_id to workspaces and tasks
-    tryMigration("add-workspaces-default-persona-id", () => {
-        conn.exec("ALTER TABLE workspaces ADD COLUMN default_persona_id TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-tasks-default-persona-id", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN default_persona_id TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-tasks-workpad", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN workpad TEXT NOT NULL DEFAULT ''");
-    });
-    // Migration: add type and script columns to personas if missing
-    tryMigration("add-personas-type", () => {
-        conn.exec("ALTER TABLE personas ADD COLUMN type TEXT NOT NULL DEFAULT 'agent'");
-    });
-    tryMigration("add-personas-script", () => {
-        conn.exec("ALTER TABLE personas ADD COLUMN script TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-personas-allowed-mcp-tools", () => {
-        conn.exec("ALTER TABLE personas ADD COLUMN allowed_mcp_tools TEXT NOT NULL DEFAULT '[]'");
-    });
-    tryMigration("add-sessions-parent-session-id", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN parent_session_id TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-sessions-pipe-mode", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN pipe_mode TEXT NOT NULL DEFAULT ''");
-    });
-    tryMigration("add-sessions-input-tokens", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN input_tokens INTEGER NOT NULL DEFAULT 0");
-    });
-    tryMigration("add-sessions-output-tokens", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN output_tokens INTEGER NOT NULL DEFAULT 0");
-    });
-    tryMigration("add-sessions-cost-usd", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN cost_usd REAL NOT NULL DEFAULT 0");
-    });
-    // Migration: add end_reason column to sessions if missing (older databases)
-    tryMigration("add-sessions-end-reason", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN end_reason TEXT");
-    });
-    // Migration: normalize old session statuses to STOPPED + end_reason
-    conn.exec(`
-    UPDATE sessions SET end_reason = 'completed', status = 'stopped'
-      WHERE status = 'completed';
-    UPDATE sessions SET end_reason = 'interrupted', status = 'stopped'
-      WHERE status IN ('failed', 'interrupted');
-    UPDATE sessions SET end_reason = 'completed', status = 'stopped'
-      WHERE status = 'hibernating';
-  `);
-    // Migration: make workspace_id nullable on tasks.
-    // SQLite doesn't support ALTER COLUMN, so we recreate the table.
-    // Guard: only run if the column currently has NOT NULL.
-    {
-        const tableInfo = conn.prepare("PRAGMA table_info(tasks)").all();
-        const workspaceIdCol = tableInfo.find((c) => c.name === "workspace_id");
-        if (workspaceIdCol?.notnull === 1) {
-            conn.exec(`
-        BEGIN;
-        CREATE TABLE tasks_new (
-          id             TEXT PRIMARY KEY,
-          workspace_id   TEXT REFERENCES workspaces(id),
-          title          TEXT NOT NULL,
-          description    TEXT NOT NULL DEFAULT '',
-          status         TEXT NOT NULL DEFAULT 'not_started',
-          branch         TEXT NOT NULL DEFAULT '',
-          depends_on     TEXT NOT NULL DEFAULT '[]',
-          started_at     TEXT,
-          completed_at   TEXT,
-          created_at     TEXT NOT NULL DEFAULT (datetime('now')),
-          updated_at     TEXT NOT NULL DEFAULT (datetime('now')),
-          sort_order     INTEGER NOT NULL DEFAULT 0,
-          parent_task_id TEXT NOT NULL DEFAULT '',
-          depth          INTEGER NOT NULL DEFAULT 0,
-          can_decompose  INTEGER NOT NULL DEFAULT 0,
-          default_persona_id TEXT NOT NULL DEFAULT '',
-          workpad        TEXT NOT NULL DEFAULT '',
-          schedule_id    TEXT NOT NULL DEFAULT ''
-        );
-        INSERT INTO tasks_new SELECT
-          id, workspace_id, title, description, status, branch, depends_on,
-          started_at, completed_at, created_at, updated_at, sort_order,
-          parent_task_id, depth, can_decompose, default_persona_id,
-          COALESCE(workpad, ''),
-          COALESCE(schedule_id, '')
-        FROM tasks;
-        DROP TABLE tasks;
-        ALTER TABLE tasks_new RENAME TO tasks;
-        COMMIT;
-      `);
-        }
-    }
-    // Migration: add index on workspaces.environment_id for efficient lookup
-    conn.exec("CREATE INDEX IF NOT EXISTS idx_workspaces_environment_id ON workspaces(environment_id)");
-    tryMigration("add-sessions-sigterm-sent-at", () => {
-        conn.exec("ALTER TABLE sessions ADD COLUMN sigterm_sent_at TEXT");
-    });
-    // Migration: rename worktree_base_path → working_directory on workspaces table (#547)
-    // Guard: only run if the old column still exists (new databases already have working_directory).
-    tryMigration("rename-worktree-base-path", () => {
-        const tableInfo = conn.prepare("PRAGMA table_info(workspaces)").all();
-        if (tableInfo.some((c) => c.name === "worktree_base_path")) {
-            conn.exec("ALTER TABLE workspaces RENAME COLUMN worktree_base_path TO working_directory");
-        }
-    });
-    // ─── Schedules table ──────────────────────────────────────
-    conn.exec(`
     CREATE TABLE IF NOT EXISTS schedules (
       id                  TEXT PRIMARY KEY,
       title               TEXT NOT NULL,
@@ -514,14 +302,40 @@ export function initDatabase(sqliteOverride) {
       created_at          TEXT NOT NULL DEFAULT (datetime('now')),
       updated_at          TEXT NOT NULL DEFAULT (datetime('now'))
     );
+
+    CREATE INDEX IF NOT EXISTS idx_findings_workspace ON findings(workspace_id);
+    CREATE INDEX IF NOT EXISTS idx_domain_events_type ON domain_events(type);
+    CREATE INDEX IF NOT EXISTS idx_domain_events_timestamp ON domain_events(timestamp);
+    CREATE INDEX IF NOT EXISTS idx_sessions_task_id ON sessions(task_id);
+    CREATE INDEX IF NOT EXISTS idx_workspaces_environment_id ON workspaces(environment_id);
     CREATE INDEX IF NOT EXISTS idx_schedules_due ON schedules(enabled, next_run_at);
   `);
-    // Migration: add schedule_id to tasks table
-    tryMigration("add-tasks-schedule-id", () => {
-        conn.exec("ALTER TABLE tasks ADD COLUMN schedule_id TEXT NOT NULL DEFAULT ''");
-    });
-    return { migrationErrors };
+    // Mark unversioned databases as baseline now that tables are confirmed
+    if (currentVersion < BASELINE_VERSION) {
+        conn.pragma(`user_version = ${BASELINE_VERSION}`);
+    }
+    // Run any pending versioned migrations
+    for (const migration of MIGRATIONS) {
+        if (migration.version <= currentVersion) {
+            continue;
+        }
+        const run = conn.transaction(() => {
+            migration.up(conn);
+            conn.pragma(`user_version = ${migration.version}`);
+        });
+        try {
+            run();
+        }
+        catch (error) {
+            const label = `Migration v${migration.version} ("${migration.name}") failed`;
+            if (error instanceof Error) {
+                error.message = `${label}: ${error.message}`;
+                throw error;
+            }
+            throw new Error(`${label}: ${String(error)}`);
+        }
+    }
 }
-export { sqlite };
+export { sqlite, CURRENT_VERSION };
 export { db as default };
 //# sourceMappingURL=db.js.map

package/dist/db.js.map

@@ -1 +1 @@
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package/dist/env-registry.d.ts

@@ -24,6 +24,8 @@ export interface UpdateEnvironmentFields {
 }
 /** Update mutable fields (displayName, adapterConfig) of an existing environment. */
 export declare function updateEnvironment(id: string, fields: UpdateEnvironmentFields): void;
+/** Update the default bootstrap runtime for an environment. */
+export declare function updateDefaultRuntime(id: string, runtime: string): void;
 /** Reset all environment statuses to disconnected on server startup. */
 export declare function resetAllStatuses(): void;
 //# sourceMappingURL=env-registry.d.ts.map

package/dist/env-registry.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"env-registry.d.ts","sourceRoot":"","sources":["../src/env-registry.ts"],"names":[],"mappings":"AACA,OAAO,EAAgB,KAAK,cAAc,EAAE,MAAM,aAAa,CAAC;AAGhE,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAI5D,YAAY,EAAE,cAAc,EAAE,CAAC;AAE/B,0CAA0C;AAC1C,wBAAgB,gBAAgB,IAAI,cAAc,EAAE,CAEnD;AAED,2CAA2C;AAC3C,wBAAgB,cAAc,CAAC,EAAE,EAAE,MAAM,GAAG,cAAc,GAAG,SAAS,CAErE;AAED,iFAAiF;AACjF,wBAAgB,cAAc,CAC5B,EAAE,EAAE,MAAM,EACV,WAAW,EAAE,MAAM,EACnB,WAAW,EAAE,MAAM,EACnB,aAAa,EAAE,MAAM,GACpB,IAAI,CASN;AAED,sDAAsD;AACtD,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI,CAElD;AAED,uEAAuE;AACvE,wBAAgB,uBAAuB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,iBAAiB,GAAG,IAAI,CAKnF;AAED,oEAAoE;AACpE,wBAAgB,gBAAgB,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI,CAKjD;AAED,oFAAoF;AACpF,wBAAgB,UAAU,CAAC,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,IAAI,CAKzD;AAED,kEAAkE;AAClE,wBAAgB,mBAAmB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,IAAI,CAKpE;AAED,oDAAoD;AACpD,MAAM,WAAW,uBAAuB;IACtC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED,qFAAqF;AACrF,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,uBAAuB,GAAG,IAAI,CAenF;AAED,wEAAwE;AACxE,wBAAgB,gBAAgB,IAAI,IAAI,CAEvC"}
+{"version":3,"file":"env-registry.d.ts","sourceRoot":"","sources":["../src/env-registry.ts"],"names":[],"mappings":"AACA,OAAO,EAAgB,KAAK,cAAc,EAAE,MAAM,aAAa,CAAC;AAGhE,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAI5D,YAAY,EAAE,cAAc,EAAE,CAAC;AAE/B,0CAA0C;AAC1C,wBAAgB,gBAAgB,IAAI,cAAc,EAAE,CAEnD;AAED,2CAA2C;AAC3C,wBAAgB,cAAc,CAAC,EAAE,EAAE,MAAM,GAAG,cAAc,GAAG,SAAS,CAErE;AAED,iFAAiF;AACjF,wBAAgB,cAAc,CAC5B,EAAE,EAAE,MAAM,EACV,WAAW,EAAE,MAAM,EACnB,WAAW,EAAE,MAAM,EACnB,aAAa,EAAE,MAAM,GACpB,IAAI,CASN;AAED,sDAAsD;AACtD,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI,CAElD;AAED,uEAAuE;AACvE,wBAAgB,uBAAuB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,iBAAiB,GAAG,IAAI,CAKnF;AAED,oEAAoE;AACpE,wBAAgB,gBAAgB,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI,CAKjD;AAED,oFAAoF;AACpF,wBAAgB,UAAU,CAAC,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,IAAI,CAKzD;AAED,kEAAkE;AAClE,wBAAgB,mBAAmB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,IAAI,CAKpE;AAED,oDAAoD;AACpD,MAAM,WAAW,uBAAuB;IACtC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED,qFAAqF;AACrF,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,uBAAuB,GAAG,IAAI,CAenF;AAED,+DAA+D;AAC/D,wBAAgB,oBAAoB,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,GAAG,IAAI,CAKtE;AAED,wEAAwE;AACxE,wBAAgB,gBAAgB,IAAI,IAAI,CAEvC"}

package/dist/env-registry.js

@@ -71,6 +71,13 @@ export function updateEnvironment(id, fields) {
         .where(eq(environments.id, id))
         .run();
 }
+/** Update the default bootstrap runtime for an environment. */
+export function updateDefaultRuntime(id, runtime) {
+    db.update(environments)
+        .set({ defaultRuntime: runtime })
+        .where(eq(environments.id, id))
+        .run();
+}
 /** Reset all environment statuses to disconnected on server startup. */
 export function resetAllStatuses() {
     db.update(environments).set({ status: "disconnected" }).run();

package/dist/env-registry.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -4,8 +4,7 @@
  * Re-exports schema, stores, migrations, and utility modules so consumers
  * can import everything from a single package entry point.
  */
-export { openDatabase, initDatabase, sqlite, default as db } from "./db.js";
-export type { MigrationError, InitDatabaseResult } from "./db.js";
+export { openDatabase, initDatabase, sqlite, CURRENT_VERSION, default as db } from "./db.js";
 export { seedDatabase } from "./db-seed.js";
 export * as schema from "./schema.js";
 export type { EnvironmentRow, NewEnvironment, SessionRow, NewSession, TokenRow, WorkspaceRow, NewWorkspace, TaskRow, NewTask, FindingRow, NewFinding, PersonaRow, NewPersona, ScheduleRow, NewSchedule, } from "./schema.js";

package/dist/index.d.ts.map

@@ -1 +1 @@
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package/dist/index.js

@@ -5,7 +5,7 @@
  * can import everything from a single package entry point.
  */
 // ─── Database Lifecycle ────────────────────────────────────
-export { openDatabase, initDatabase, sqlite, default as db } from "./db.js";
+export { openDatabase, initDatabase, sqlite, CURRENT_VERSION, default as db } from "./db.js";
 export { seedDatabase } from "./db-seed.js";
 // ─── Schema ────────────────────────────────────────────────
 export * as schema from "./schema.js";

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,8DAA8D;AAC9D,OAAO,EAAE,YAAY,EAAE,YAAY,EAAE,MAAM,EAAE,eAAe,EAAE,OAAO,IAAI,EAAE,EAAE,MAAM,SAAS,CAAC;AAC7F,OAAO,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAE5C,8DAA8D;AAC9D,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;AAmBtC,8DAA8D;AAC9D,OAAO,KAAK,YAAY,MAAM,oBAAoB,CAAC;AACnD,OAAO,KAAK,SAAS,MAAM,iBAAiB,CAAC;AAC7C,OAAO,KAAK,cAAc,MAAM,sBAAsB,CAAC;AACvD,OAAO,KAAK,YAAY,MAAM,oBAAoB,CAAC;AACnD,OAAO,KAAK,YAAY,MAAM,oBAAoB,CAAC;AACnD,OAAO,KAAK,aAAa,MAAM,qBAAqB,CAAC;AACrD,OAAO,KAAK,WAAW,MAAM,mBAAmB,CAAC;AACjD,OAAO,KAAK,UAAU,MAAM,kBAAkB,CAAC;AAC/C,OAAO,KAAK,mBAAmB,MAAM,2BAA2B,CAAC;AACjE,OAAO,KAAK,aAAa,MAAM,qBAAqB,CAAC;AAMrD,OAAO,EAAE,mBAAmB,EAAE,qBAAqB,EAAE,MAAM,qBAAqB,CAAC;AACjF,OAAO,EACL,eAAe,EACf,mBAAmB,EACnB,mBAAmB,EACnB,6BAA6B,EAC7B,+BAA+B,GAChC,MAAM,2BAA2B,CAAC;AAEnC,8DAA8D;AAC9D,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAGhD,8DAA8D;AAC9D,OAAO,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AACzC,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,aAAa,CAAC;AAC/C,OAAO,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AACvD,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@grackle-ai/database",
-  "version": "0.84.1",
+  "version": "0.85.1",
   "description": "SQLite persistence layer for Grackle — schema, stores, and migrations",
   "license": "MIT",
   "repository": {
@@ -32,7 +32,7 @@
     "better-sqlite3": "^11.0.0",
     "drizzle-orm": "^0.38.0",
     "uuid": "^11.0.0",
-    "@grackle-ai/common": "0.84.1"
+    "@grackle-ai/common": "0.85.1"
   },
   "devDependencies": {
     "@rushstack/heft": "1.2.7",