@goondocks/myco 0.9.0 → 0.10.0

package/dist/{chunk-OXZSXYAT.js → chunk-FFQES5MC.js}

@@ -1,8 +1,12 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
+import {
+  syncRow
+} from "./chunk-XLY3REL3.js";
 import {
   getDatabase
 } from "./chunk-MYX5NCRH.js";
 import {
+  DEFAULT_MACHINE_ID,
   DIGEST_TIERS,
   EDGE_TYPE_DERIVED_FROM,
   EDGE_TYPE_EXTRACTED_FROM,
@@ -10,7 +14,7 @@ import {
   EDGE_TYPE_HAS_BATCH,
   GRAPH_EDGE_DEFAULT_CONFIDENCE,
   QUERY_DEFAULT_LIST_LIMIT
-} from "./chunk-5VZ52A4T.js";
+} from "./chunk-76ZO5RGT.js";
 
 // src/db/queries/batches.ts
 var DEFAULT_UNPROCESSED_LIMIT = 100;
@@ -34,7 +38,9 @@ var BATCH_COLUMNS = [
   "activity_count",
   "processed",
   "content_hash",
-  "created_at"
+  "created_at",
+  "machine_id",
+  "synced_at"
 ];
 var SELECT_COLUMNS = BATCH_COLUMNS.join(", ");
 function toBatchRow(row) {
@@ -51,7 +57,9 @@ function toBatchRow(row) {
     activity_count: row.activity_count,
     processed: row.processed,
     content_hash: row.content_hash ?? null,
-    created_at: row.created_at
+    created_at: row.created_at,
+    machine_id: row.machine_id ?? DEFAULT_MACHINE_ID,
+    synced_at: row.synced_at ?? null
   };
 }
 function populateBatchResponses(sessionId, responses) {
@@ -129,13 +137,13 @@ function insertBatchStateless(data) {
     `INSERT INTO prompt_batches (
        session_id, prompt_number, user_prompt, response_summary,
        classification, started_at, ended_at, status,
-       activity_count, processed, content_hash, created_at
+       activity_count, processed, content_hash, created_at, machine_id
      ) VALUES (
        ?,
        (SELECT COALESCE(MAX(prompt_number), 0) + 1 FROM prompt_batches WHERE session_id = ?),
        ?, NULL,
        NULL, ?, NULL, ?,
-       ?, ?, NULL, ?
+       ?, ?, NULL, ?, ?
      )`
   ).run(
     data.session_id,
@@ -145,7 +153,8 @@ function insertBatchStateless(data) {
     data.status ?? DEFAULT_STATUS,
     DEFAULT_ACTIVITY_COUNT,
     DEFAULT_PROCESSED,
-    data.created_at
+    data.created_at,
+    DEFAULT_MACHINE_ID
   );
   const batchId = Number(info.lastInsertRowid);
   const userPrompt = data.user_prompt ?? null;
@@ -508,7 +517,9 @@ var GRAPH_EDGE_COLUMNS = [
   "session_id",
   "confidence",
   "properties",
-  "created_at"
+  "created_at",
+  "machine_id",
+  "synced_at"
 ];
 var SELECT_COLUMNS5 = GRAPH_EDGE_COLUMNS.join(", ");
 function toGraphEdgeRow(row) {
@@ -523,7 +534,9 @@ function toGraphEdgeRow(row) {
     session_id: row.session_id ?? null,
     confidence: row.confidence,
     properties: row.properties ?? null,
-    created_at: row.created_at
+    created_at: row.created_at,
+    machine_id: row.machine_id ?? DEFAULT_MACHINE_ID,
+    synced_at: row.synced_at ?? null
   };
 }
 function insertGraphEdge(data) {
@@ -532,8 +545,8 @@ function insertGraphEdge(data) {
   db.prepare(
     `INSERT INTO graph_edges (
        id, agent_id, source_id, source_type, target_id, target_type,
-       type, session_id, confidence, properties, created_at
-     ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`
+       type, session_id, confidence, properties, created_at, machine_id
+     ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`
   ).run(
     id,
     data.agent_id,
@@ -545,11 +558,14 @@ function insertGraphEdge(data) {
     data.session_id ?? null,
     data.confidence ?? GRAPH_EDGE_DEFAULT_CONFIDENCE,
     data.properties ?? null,
-    data.created_at
+    data.created_at,
+    data.machine_id ?? DEFAULT_MACHINE_ID
   );
-  return toGraphEdgeRow(
+  const row = toGraphEdgeRow(
     db.prepare(`SELECT ${SELECT_COLUMNS5} FROM graph_edges WHERE id = ?`).get(id)
   );
+  syncRow("graph_edges", row);
+  return row;
 }
 function listGraphEdges(options = {}) {
   const db = getDatabase();
@@ -688,7 +704,9 @@ var ENTITY_COLUMNS = [
   "properties",
   "first_seen",
   "last_seen",
-  "status"
+  "status",
+  "machine_id",
+  "synced_at"
 ];
 var SELECT_COLUMNS6 = ENTITY_COLUMNS.join(", ");
 function toEntityRow(row) {
@@ -700,14 +718,16 @@ function toEntityRow(row) {
     properties: row.properties ?? null,
     first_seen: row.first_seen,
     last_seen: row.last_seen,
-    status: row.status ?? "active"
+    status: row.status ?? "active",
+    machine_id: row.machine_id ?? DEFAULT_MACHINE_ID,
+    synced_at: row.synced_at ?? null
   };
 }
 function insertEntity(data) {
   const db = getDatabase();
   db.prepare(
-    `INSERT INTO entities (id, agent_id, type, name, properties, first_seen, last_seen)
-     VALUES (?, ?, ?, ?, ?, ?, ?)
+    `INSERT INTO entities (id, agent_id, type, name, properties, first_seen, last_seen, machine_id)
+     VALUES (?, ?, ?, ?, ?, ?, ?, ?)
      ON CONFLICT (agent_id, type, name) DO UPDATE SET
        properties = COALESCE(EXCLUDED.properties, entities.properties),
        last_seen = EXCLUDED.last_seen`
@@ -718,15 +738,18 @@ function insertEntity(data) {
     data.name,
     data.properties ?? null,
     data.first_seen,
-    data.last_seen
+    data.last_seen,
+    data.machine_id ?? DEFAULT_MACHINE_ID
   );
-  return toEntityRow(
+  const row = toEntityRow(
     db.prepare(`SELECT ${SELECT_COLUMNS6} FROM entities WHERE agent_id = ? AND type = ? AND name = ?`).get(
       data.agent_id,
       data.type,
       data.name
     )
   );
+  syncRow("entities", row);
+  return row;
 }
 function getEntity(id) {
   const db = getDatabase();
@@ -789,7 +812,9 @@ var EXTRACT_COLUMNS = [
   "tier",
   "content",
   "substrate_hash",
-  "generated_at"
+  "generated_at",
+  "machine_id",
+  "synced_at"
 ];
 var SELECT_COLUMNS7 = EXTRACT_COLUMNS.join(", ");
 function toDigestExtractRow(row) {
@@ -799,7 +824,9 @@ function toDigestExtractRow(row) {
     tier: row.tier,
     content: row.content,
     substrate_hash: row.substrate_hash ?? null,
-    generated_at: row.generated_at
+    generated_at: row.generated_at,
+    machine_id: row.machine_id ?? DEFAULT_MACHINE_ID,
+    synced_at: row.synced_at ?? null
   };
 }
 function upsertDigestExtract(data) {
@@ -874,4 +901,4 @@ export {
   createSporeLineage,
   createBatchLineage
 };
-//# sourceMappingURL=chunk-OXZSXYAT.js.map
+//# sourceMappingURL=chunk-FFQES5MC.js.map

package/dist/chunk-FFQES5MC.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/db/queries/batches.ts","../src/utils/error-message.ts","../src/db/queries/turns.ts","../src/db/queries/runs.ts","../src/db/queries/reports.ts","../src/db/queries/graph-edges.ts","../src/db/queries/lineage.ts","../src/db/queries/entities.ts","../src/db/queries/digest-extracts.ts"],"sourcesContent":["/**\n * Prompt batch CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\nimport { DEFAULT_MACHINE_ID } from '@myco/constants.js';\nimport { syncRow } from '@myco/db/queries/team-outbox.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of unprocessed batches returned when no limit given. */\nconst DEFAULT_UNPROCESSED_LIMIT = 100;\n\n/** Default number of batches returned by listBatchesBySession when no limit given. */\nexport const BATCHES_DEFAULT_LIMIT = 200;\n\n/** Batch status value when a batch is closed normally. */\nconst STATUS_COMPLETED = 'completed';\n\n/** Default batch status for new batches. */\nconst DEFAULT_STATUS = 'active';\n\n/** Default activity count for new batches. */\nconst DEFAULT_ACTIVITY_COUNT = 0;\n\n/** Default processed flag for new batches. */\nconst DEFAULT_PROCESSED = 0;\n\n/** Processed flag value indicating a batch has been processed. */\nconst PROCESSED_FLAG = 1;\n\n/** Number of characters used for prompt prefix matching. */\nconst PROMPT_PREFIX_MATCH_CHARS = 60;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Filter options for `listBatchesBySession`. */\nexport interface ListBatchesBySessionOptions {\n  limit?: number;\n  offset?: number;\n}\n\n/** Fields required (or optional) when inserting a prompt batch. */\nexport interface BatchInsert {\n  session_id: string;\n  created_at: number;\n  prompt_number?: number | null;\n  user_prompt?: string | null;\n  response_summary?: string | null;\n  classification?: string | null;\n  started_at?: number | null;\n  ended_at?: number | null;\n  status?: string;\n  activity_count?: number;\n  processed?: number;\n  content_hash?: string | null;\n  machine_id?: string;\n}\n\n/** Row shape returned from batch queries. */\nexport interface BatchRow {\n  id: number;\n  session_id: string;\n  prompt_number: number | null;\n  user_prompt: string | null;\n  response_summary: string | null;\n  classification: string | null;\n  started_at: number | null;\n  ended_at: number | null;\n  status: string;\n  activity_count: number;\n  processed: number;\n  content_hash: string | null;\n  created_at: number;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst BATCH_COLUMNS = [\n  'id',\n  'session_id',\n  'prompt_number',\n  'user_prompt',\n  'response_summary',\n  'classification',\n  'started_at',\n  'ended_at',\n  'status',\n  'activity_count',\n  'processed',\n  'content_hash',\n  'created_at',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = BATCH_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed BatchRow. */\nfunction toBatchRow(row: Record<string, unknown>): BatchRow {\n  return {\n    id: row.id as number,\n    session_id: row.session_id as string,\n    prompt_number: (row.prompt_number as number) ?? null,\n    user_prompt: (row.user_prompt as string) ?? null,\n    response_summary: (row.response_summary as string) ?? null,\n    classification: (row.classification as string) ?? null,\n    started_at: (row.started_at as number) ?? null,\n    ended_at: (row.ended_at as number) ?? null,\n    status: row.status as string,\n    activity_count: row.activity_count as number,\n    processed: row.processed as number,\n    content_hash: (row.content_hash as string) ?? null,\n    created_at: row.created_at as number,\n    machine_id: (row.machine_id as string) ?? DEFAULT_MACHINE_ID,\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new prompt batch.\n *\n * The `id` is auto-generated by the INTEGER PRIMARY KEY (AUTOINCREMENT).\n * FTS5 index is kept in sync via a follow-up INSERT into prompt_batches_fts.\n */\nexport function insertBatch(data: BatchInsert): BatchRow {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `INSERT INTO prompt_batches (\n       session_id, prompt_number, user_prompt, response_summary,\n       classification, started_at, ended_at, status,\n       activity_count, processed, content_hash, created_at, machine_id\n     ) VALUES (\n       ?, ?, ?, ?,\n       ?, ?, ?, ?,\n       ?, ?, ?, ?, ?\n     )`,\n  ).run(\n    data.session_id,\n    data.prompt_number ?? null,\n    data.user_prompt ?? null,\n    data.response_summary ?? null,\n    data.classification ?? null,\n    data.started_at ?? null,\n    data.ended_at ?? null,\n    data.status ?? DEFAULT_STATUS,\n    data.activity_count ?? DEFAULT_ACTIVITY_COUNT,\n    data.processed ?? DEFAULT_PROCESSED,\n    data.content_hash ?? null,\n    data.created_at,\n    data.machine_id ?? DEFAULT_MACHINE_ID,\n  );\n\n  const batchId = Number(info.lastInsertRowid);\n\n  // FTS5 sync\n  const userPrompt = data.user_prompt ?? null;\n  if (userPrompt) {\n    db.prepare('INSERT INTO prompt_batches_fts(rowid, user_prompt) VALUES (?, ?)').run(batchId, userPrompt);\n  }\n\n  const row = toBatchRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM prompt_batches WHERE id = ?`).get(batchId) as Record<string, unknown>,\n  );\n\n  syncRow('prompt_batches', row);\n\n  return row;\n}\n\n/**\n * Close a batch — set status to 'completed' and record the end time.\n *\n * @returns the updated row, or null if the batch does not exist.\n */\nexport function closeBatch(\n  id: number,\n  endedAt: number,\n): BatchRow | null {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `UPDATE prompt_batches\n     SET status = ?, ended_at = ?\n     WHERE id = ?`,\n  ).run(STATUS_COMPLETED, endedAt, id);\n\n  if (info.changes === 0) return null;\n\n  return toBatchRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM prompt_batches WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n}\n\n/**\n * Populate response_summary on batches from transcript turns.\n *\n * Matches transcript turns (ordered by position) to batches (ordered by id ASC).\n * This is resilient to prompt_number duplicates caused by daemon restarts.\n * Only updates batches that don't already have a response_summary.\n *\n * @param sessionId — the session to update\n * @param responses — array of { response } ordered by turn position (1-indexed)\n */\nexport function populateBatchResponses(\n  sessionId: string,\n  responses: Array<{ turnIndex: number; response: string }>,\n): void {\n  const db = getDatabase();\n\n  // Get all batches for this session ordered by id (insertion order = true order)\n  const batches = db.prepare(\n    `SELECT id FROM prompt_batches WHERE session_id = ? ORDER BY id ASC`,\n  ).all(sessionId) as Array<{ id: number }>;\n\n  // Map each response to the batch at the same position\n  for (const { turnIndex, response } of responses) {\n    const batchIndex = turnIndex - 1; // turns are 1-indexed\n    if (batchIndex >= 0 && batchIndex < batches.length) {\n      const batchId = batches[batchIndex].id;\n      db.prepare(\n        `UPDATE prompt_batches SET response_summary = ? WHERE id = ? AND response_summary IS NULL`,\n      ).run(response, batchId);\n    }\n  }\n}\n\n/**\n * Get unprocessed batches, ordered by id ASC (insertion order).\n *\n * Supports cursor-based pagination via `after_id` and a `limit` cap.\n */\nexport function getUnprocessedBatches(\n  options: { after_id?: number; limit?: number } = {},\n): BatchRow[] {\n  const db = getDatabase();\n\n  const conditions: string[] = [`processed = ?`];\n  const params: unknown[] = [DEFAULT_PROCESSED];\n\n  if (options.after_id !== undefined) {\n    conditions.push(`id > ?`);\n    params.push(options.after_id);\n  }\n\n  const limit = options.limit ?? DEFAULT_UNPROCESSED_LIMIT;\n  params.push(limit);\n\n  const where = conditions.join(' AND ');\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM prompt_batches\n     WHERE ${where}\n     ORDER BY id ASC\n     LIMIT ?`,\n  ).all(...params) as Record<string, unknown>[];\n\n  return rows.map(toBatchRow);\n}\n\n/**\n * Increment the activity_count for a batch by 1.\n *\n * @returns the updated row, or null if the batch does not exist.\n */\nexport function incrementActivityCount(\n  id: number,\n): BatchRow | null {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `UPDATE prompt_batches\n     SET activity_count = activity_count + 1\n     WHERE id = ?`,\n  ).run(id);\n\n  if (info.changes === 0) return null;\n\n  return toBatchRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM prompt_batches WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n}\n\n/**\n * Mark a batch as processed (processed = 1).\n *\n * @returns the updated row, or null if the batch does not exist.\n */\nexport function markBatchProcessed(\n  id: number,\n): BatchRow | null {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `UPDATE prompt_batches\n     SET processed = ?\n     WHERE id = ?`,\n  ).run(PROCESSED_FLAG, id);\n\n  if (info.changes === 0) return null;\n\n  return toBatchRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM prompt_batches WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n}\n\n/**\n * Get a batch's ID by session and prompt number.\n * Used to link attachments to their prompt batch at stop time.\n */\nexport function getBatchIdByPromptNumber(\n  sessionId: string,\n  promptNumber: number,\n): number | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT id FROM prompt_batches WHERE session_id = ? AND prompt_number = ? LIMIT 1`,\n  ).get(sessionId, promptNumber) as { id: number } | undefined;\n\n  return row ? row.id : null;\n}\n\n/**\n * Find a batch by matching the start of its user_prompt text.\n * Used for attachment matching after transcript compaction where turn indices no longer\n * align with prompt_numbers.\n */\nexport function findBatchByPromptPrefix(\n  sessionId: string,\n  promptPrefix: string,\n): { id: number; prompt_number: number } | null {\n  const db = getDatabase();\n  // Match first N chars — enough to be unique, tolerant of minor differences\n  const prefix = promptPrefix.slice(0, PROMPT_PREFIX_MATCH_CHARS);\n  const row = db.prepare(\n    `SELECT id, prompt_number FROM prompt_batches\n     WHERE session_id = ? AND user_prompt LIKE ? || '%'\n     LIMIT 1`,\n  ).get(sessionId, prefix) as { id: number; prompt_number: number } | undefined;\n  return row ?? null;\n}\n\n/** Fields required when inserting a batch statelessly (prompt_number derived from DB). */\nexport interface StatelessBatchInsert {\n  session_id: string;\n  created_at: number;\n  user_prompt?: string | null;\n  started_at?: number | null;\n  status?: string;\n}\n\n/**\n * Insert a new prompt batch with prompt_number derived from an inline subquery.\n *\n * The prompt_number is set to `COALESCE(MAX(prompt_number), 0) + 1` for the\n * session, so the caller never needs a separate SELECT. This makes the insert\n * stateless — no in-memory counter required.\n *\n * FTS5 index is kept in sync via a follow-up INSERT into prompt_batches_fts.\n */\nexport function insertBatchStateless(data: StatelessBatchInsert): BatchRow {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `INSERT INTO prompt_batches (\n       session_id, prompt_number, user_prompt, response_summary,\n       classification, started_at, ended_at, status,\n       activity_count, processed, content_hash, created_at, machine_id\n     ) VALUES (\n       ?,\n       (SELECT COALESCE(MAX(prompt_number), 0) + 1 FROM prompt_batches WHERE session_id = ?),\n       ?, NULL,\n       NULL, ?, NULL, ?,\n       ?, ?, NULL, ?, ?\n     )`,\n  ).run(\n    data.session_id,\n    data.session_id,\n    data.user_prompt ?? null,\n    data.started_at ?? null,\n    data.status ?? DEFAULT_STATUS,\n    DEFAULT_ACTIVITY_COUNT,\n    DEFAULT_PROCESSED,\n    data.created_at,\n    DEFAULT_MACHINE_ID,\n  );\n\n  const batchId = Number(info.lastInsertRowid);\n\n  // FTS5 sync\n  const userPrompt = data.user_prompt ?? null;\n  if (userPrompt) {\n    db.prepare('INSERT INTO prompt_batches_fts(rowid, user_prompt) VALUES (?, ?)').run(batchId, userPrompt);\n  }\n\n  return toBatchRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM prompt_batches WHERE id = ?`).get(batchId) as Record<string, unknown>,\n  );\n}\n\n/**\n * Close all open batches for a session — blind UPDATE, no prior SELECT needed.\n *\n * Sets `status = 'completed'` and `ended_at` on every batch that has no\n * `ended_at` value yet. Returns the number of batches closed.\n */\nexport function closeOpenBatches(\n  sessionId: string,\n  endedAt: number,\n): number {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `UPDATE prompt_batches\n     SET status = ?, ended_at = ?\n     WHERE session_id = ? AND ended_at IS NULL`,\n  ).run(STATUS_COMPLETED, endedAt, sessionId);\n\n  return info.changes;\n}\n\n/**\n * Set response_summary on a batch if it doesn't already have one.\n *\n * Idempotent — only updates NULL response_summary.\n */\nexport function setResponseSummary(\n  batchId: number,\n  summary: string,\n): void {\n  const db = getDatabase();\n  db.prepare(\n    `UPDATE prompt_batches SET response_summary = ? WHERE id = ? AND response_summary IS NULL`,\n  ).run(summary, batchId);\n}\n\n/**\n * Get the most recent batch for a session (by id DESC), regardless of status.\n *\n * Used by processStopEvent to attach the AI response and images to the\n * correct batch without positional turn mapping.\n */\nexport function getLatestBatch(\n  sessionId: string,\n): BatchRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM prompt_batches\n     WHERE session_id = ?\n     ORDER BY id DESC LIMIT 1`,\n  ).get(sessionId) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toBatchRow(row);\n}\n\nexport function listBatchesBySession(\n  sessionId: string,\n  options: ListBatchesBySessionOptions = {},\n): BatchRow[] {\n  const db = getDatabase();\n\n  const limit = options.limit ?? BATCHES_DEFAULT_LIMIT;\n  const offset = options.offset ?? 0;\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM prompt_batches\n     WHERE session_id = ?\n     ORDER BY prompt_number ASC\n     LIMIT ?\n     OFFSET ?`,\n  ).all(sessionId, limit, offset) as Record<string, unknown>[];\n\n  return rows.map(toBatchRow);\n}\n","/**\n * Extract a human-readable error message from an unknown thrown value.\n *\n * Handles Error instances, strings, and arbitrary objects. Never throws.\n */\nexport function errorMessage(err: unknown): string {\n  if (err instanceof Error) return err.message || err.constructor.name || 'Error';\n  if (typeof err === 'string') return err || 'Empty string error';\n  try { return JSON.stringify(err); } catch { return 'Unserializable error'; }\n}\n","/**\n * Agent turn CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting a turn. */\nexport interface TurnInsert {\n  run_id: string;\n  agent_id: string;\n  turn_number: number;\n  tool_name: string;\n  tool_input?: string | null;\n  tool_output_summary?: string | null;\n  started_at?: number | null;\n  completed_at?: number | null;\n}\n\n/** Row shape returned from agent_turns queries (all columns). */\nexport interface TurnRow {\n  id: number;\n  run_id: string;\n  agent_id: string;\n  turn_number: number;\n  tool_name: string;\n  tool_input: string | null;\n  tool_output_summary: string | null;\n  started_at: number | null;\n  completed_at: number | null;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst TURN_COLUMNS = [\n  'id',\n  'run_id',\n  'agent_id',\n  'turn_number',\n  'tool_name',\n  'tool_input',\n  'tool_output_summary',\n  'started_at',\n  'completed_at',\n] as const;\n\nconst SELECT_COLUMNS = TURN_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed TurnRow. */\nfunction toTurnRow(row: Record<string, unknown>): TurnRow {\n  return {\n    id: row.id as number,\n    run_id: row.run_id as string,\n    agent_id: row.agent_id as string,\n    turn_number: row.turn_number as number,\n    tool_name: row.tool_name as string,\n    tool_input: (row.tool_input as string) ?? null,\n    tool_output_summary: (row.tool_output_summary as string) ?? null,\n    started_at: (row.started_at as number) ?? null,\n    completed_at: (row.completed_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new agent turn.\n *\n * The `id` is auto-generated by the INTEGER PRIMARY KEY (AUTOINCREMENT).\n */\nexport function insertTurn(data: TurnInsert): TurnRow {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `INSERT INTO agent_turns (\n       run_id, agent_id, turn_number, tool_name,\n       tool_input, tool_output_summary, started_at, completed_at\n     ) VALUES (\n       ?, ?, ?, ?,\n       ?, ?, ?, ?\n     )`,\n  ).run(\n    data.run_id,\n    data.agent_id,\n    data.turn_number,\n    data.tool_name,\n    data.tool_input ?? null,\n    data.tool_output_summary ?? null,\n    data.started_at ?? null,\n    data.completed_at ?? null,\n  );\n\n  const turnId = Number(info.lastInsertRowid);\n\n  return toTurnRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_turns WHERE id = ?`).get(turnId) as Record<string, unknown>,\n  );\n}\n\n/**\n * List all turns for a specific run, ordered by turn_number ASC.\n */\nexport function listTurns(runId: string): TurnRow[] {\n  const db = getDatabase();\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_turns\n     WHERE run_id = ?\n     ORDER BY turn_number ASC`,\n  ).all(runId) as Record<string, unknown>[];\n\n  return rows.map(toTurnRow);\n}\n\n/**\n * List all agent turns for a run, ordered by turn_number ASC.\n *\n * Alias for `listTurns` with an explicit \"by run\" naming convention used\n * by the dashboard API layer.\n */\nexport function listTurnsByRun(runId: string): TurnRow[] {\n  return listTurns(runId);\n}\n","/**\n * Agent run CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of runs returned by listRuns when no limit given. */\nconst DEFAULT_LIST_LIMIT = 100;\n\n/** Default run status for new runs. */\nconst DEFAULT_STATUS = 'pending';\n\n/** Run status indicating the run is currently executing. */\nexport const STATUS_RUNNING = 'running';\n\n/** Run status for a successfully completed run. */\nexport const STATUS_COMPLETED = 'completed';\n\n/** Run status for a run that encountered an error. */\nexport const STATUS_FAILED = 'failed';\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting a run. */\nexport interface RunInsert {\n  id: string;\n  agent_id: string;\n  task?: string | null;\n  instruction?: string | null;\n  status?: string;\n  started_at?: number | null;\n  completed_at?: number | null;\n  tokens_used?: number | null;\n  cost_usd?: number | null;\n  actions_taken?: string | null;\n  error?: string | null;\n}\n\n/** Row shape returned from agent_runs queries (all columns). */\nexport interface RunRow {\n  id: string;\n  agent_id: string;\n  task: string | null;\n  instruction: string | null;\n  status: string;\n  started_at: number | null;\n  completed_at: number | null;\n  tokens_used: number | null;\n  cost_usd: number | null;\n  actions_taken: string | null;\n  error: string | null;\n}\n\n/** Completion data passed to updateRunStatus. */\nexport interface RunCompletion {\n  completed_at?: number;\n  tokens_used?: number;\n  cost_usd?: number;\n  actions_taken?: string;\n  error?: string;\n}\n\n/** Filter options for `listRuns`. */\nexport interface ListRunsOptions {\n  limit?: number;\n  offset?: number;\n  agent_id?: string;\n  status?: string;\n  task?: string;\n  search?: string;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst RUN_COLUMNS = [\n  'id',\n  'agent_id',\n  'task',\n  'instruction',\n  'status',\n  'started_at',\n  'completed_at',\n  'tokens_used',\n  'cost_usd',\n  'actions_taken',\n  'error',\n] as const;\n\nconst SELECT_COLUMNS = RUN_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed RunRow. */\nfunction toRunRow(row: Record<string, unknown>): RunRow {\n  return {\n    id: row.id as string,\n    agent_id: row.agent_id as string,\n    task: (row.task as string) ?? null,\n    instruction: (row.instruction as string) ?? null,\n    status: row.status as string,\n    started_at: (row.started_at as number) ?? null,\n    completed_at: (row.completed_at as number) ?? null,\n    tokens_used: (row.tokens_used as number) ?? null,\n    cost_usd: (row.cost_usd as number) ?? null,\n    actions_taken: (row.actions_taken as string) ?? null,\n    error: (row.error as string) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new agent run.\n */\nexport function insertRun(data: RunInsert): RunRow {\n  const db = getDatabase();\n\n  db.prepare(\n    `INSERT INTO agent_runs (\n       id, agent_id, task, instruction, status,\n       started_at, completed_at, tokens_used, cost_usd,\n       actions_taken, error\n     ) VALUES (\n       ?, ?, ?, ?, ?,\n       ?, ?, ?, ?,\n       ?, ?\n     )`,\n  ).run(\n    data.id,\n    data.agent_id,\n    data.task ?? null,\n    data.instruction ?? null,\n    data.status ?? DEFAULT_STATUS,\n    data.started_at ?? null,\n    data.completed_at ?? null,\n    data.tokens_used ?? null,\n    data.cost_usd ?? null,\n    data.actions_taken ?? null,\n    data.error ?? null,\n  );\n\n  return toRunRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_runs WHERE id = ?`).get(data.id) as Record<string, unknown>,\n  );\n}\n\n/**\n * Retrieve a single run by id.\n *\n * @returns the run row, or null if not found.\n */\nexport function getRun(id: string): RunRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM agent_runs WHERE id = ?`,\n  ).get(id) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toRunRow(row);\n}\n\n/** Build a WHERE clause and params array from ListRunsOptions filter fields. */\nfunction buildRunsWhere(\n  options: Omit<ListRunsOptions, 'limit' | 'offset'>,\n): { where: string; params: unknown[] } {\n  const conditions: string[] = [];\n  const params: unknown[] = [];\n\n  if (options.agent_id !== undefined) {\n    conditions.push(`agent_id = ?`);\n    params.push(options.agent_id);\n  }\n  if (options.status !== undefined) {\n    conditions.push(`status = ?`);\n    params.push(options.status);\n  }\n  if (options.task !== undefined) {\n    conditions.push(`task = ?`);\n    params.push(options.task);\n  }\n  if (options.search !== undefined && options.search.length > 0) {\n    conditions.push(`task LIKE ?`);\n    params.push(`%${options.search}%`);\n  }\n\n  return {\n    where: conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '',\n    params,\n  };\n}\n\n/**\n * List runs with optional filters, ordered by started_at DESC (nulls last).\n */\nexport function listRuns(\n  options: ListRunsOptions = {},\n): RunRow[] {\n  const db = getDatabase();\n  const { where, params } = buildRunsWhere(options);\n  const limit = options.limit ?? DEFAULT_LIST_LIMIT;\n  const offset = options.offset ?? 0;\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_runs\n     ${where}\n     ORDER BY started_at DESC NULLS LAST\n     LIMIT ?\n     OFFSET ?`,\n  ).all(...params, limit, offset) as Record<string, unknown>[];\n\n  return rows.map(toRunRow);\n}\n\n/**\n * Count runs matching the given filters (no limit/offset).\n */\nexport function countRuns(\n  options: Omit<ListRunsOptions, 'limit' | 'offset'> = {},\n): number {\n  const db = getDatabase();\n  const { where, params } = buildRunsWhere(options);\n\n  const row = db.prepare(\n    `SELECT COUNT(*) as count FROM agent_runs ${where}`,\n  ).get(...params) as { count: number };\n\n  return row.count;\n}\n\n/**\n * Update a run's status, with optional completion data.\n *\n * @returns the updated row, or null if the run does not exist.\n */\nexport function updateRunStatus(\n  id: string,\n  status: string,\n  completion?: RunCompletion,\n): RunRow | null {\n  const db = getDatabase();\n\n  const setClauses: string[] = ['status = ?'];\n  const params: unknown[] = [status];\n\n  if (completion?.completed_at !== undefined) {\n    setClauses.push(`completed_at = ?`);\n    params.push(completion.completed_at);\n  }\n\n  if (completion?.tokens_used !== undefined) {\n    setClauses.push(`tokens_used = ?`);\n    params.push(completion.tokens_used);\n  }\n\n  if (completion?.cost_usd !== undefined) {\n    setClauses.push(`cost_usd = ?`);\n    params.push(completion.cost_usd);\n  }\n\n  if (completion?.actions_taken !== undefined) {\n    setClauses.push(`actions_taken = ?`);\n    params.push(completion.actions_taken);\n  }\n\n  if (completion?.error !== undefined) {\n    setClauses.push(`error = ?`);\n    params.push(completion.error);\n  }\n\n  params.push(id);\n\n  const info = db.prepare(\n    `UPDATE agent_runs\n     SET ${setClauses.join(', ')}\n     WHERE id = ?`,\n  ).run(...params);\n\n  if (info.changes === 0) return null;\n\n  return toRunRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_runs WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n}\n\n/**\n * Get the currently running run for an agent, if any.\n *\n * @returns the running run row, or null if no run is active.\n */\nexport function getRunningRun(\n  agentId: string,\n): RunRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_runs\n     WHERE agent_id = ? AND status = ?\n     ORDER BY started_at DESC NULLS LAST\n     LIMIT 1`,\n  ).get(agentId, STATUS_RUNNING) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toRunRow(row);\n}\n","/**\n * Agent report CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of reports returned by list queries when no limit given. */\nconst DEFAULT_LIST_LIMIT = 100;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting a report. */\nexport interface ReportInsert {\n  run_id: string;\n  agent_id: string;\n  action: string;\n  summary: string;\n  details?: string | null;\n  created_at: number;\n}\n\n/** Row shape returned from agent_reports queries (all columns). */\nexport interface ReportRow {\n  id: number;\n  run_id: string;\n  agent_id: string;\n  action: string;\n  summary: string;\n  details: string | null;\n  created_at: number;\n}\n\n/** Filter options for `listReportsByAgent`. */\nexport interface ListReportsByAgentOptions {\n  limit?: number;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst REPORT_COLUMNS = [\n  'id',\n  'run_id',\n  'agent_id',\n  'action',\n  'summary',\n  'details',\n  'created_at',\n] as const;\n\nconst SELECT_COLUMNS = REPORT_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed ReportRow. */\nfunction toReportRow(row: Record<string, unknown>): ReportRow {\n  return {\n    id: row.id as number,\n    run_id: row.run_id as string,\n    agent_id: row.agent_id as string,\n    action: row.action as string,\n    summary: row.summary as string,\n    details: (row.details as string) ?? null,\n    created_at: row.created_at as number,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new agent report.\n *\n * The `id` is auto-generated by the INTEGER PRIMARY KEY (AUTOINCREMENT).\n */\nexport function insertReport(data: ReportInsert): ReportRow {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `INSERT INTO agent_reports (\n       run_id, agent_id, action, summary, details, created_at\n     ) VALUES (\n       ?, ?, ?, ?, ?, ?\n     )`,\n  ).run(\n    data.run_id,\n    data.agent_id,\n    data.action,\n    data.summary,\n    data.details ?? null,\n    data.created_at,\n  );\n\n  const reportId = Number(info.lastInsertRowid);\n\n  return toReportRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_reports WHERE id = ?`).get(reportId) as Record<string, unknown>,\n  );\n}\n\n/**\n * List all reports for a specific run, ordered by created_at ASC.\n */\nexport function listReports(runId: string): ReportRow[] {\n  const db = getDatabase();\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_reports\n     WHERE run_id = ?\n     ORDER BY created_at ASC`,\n  ).all(runId) as Record<string, unknown>[];\n\n  return rows.map(toReportRow);\n}\n\n/**\n * List reports by agent, ordered by created_at DESC.\n */\nexport function listReportsByAgent(\n  agentId: string,\n  options: ListReportsByAgentOptions = {},\n): ReportRow[] {\n  const db = getDatabase();\n\n  const limit = options.limit ?? DEFAULT_LIST_LIMIT;\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_reports\n     WHERE agent_id = ?\n     ORDER BY created_at DESC\n     LIMIT ?`,\n  ).all(agentId, limit) as Record<string, unknown>[];\n\n  return rows.map(toReportRow);\n}\n","/**\n * Graph edge CRUD query helpers.\n *\n * Unlike the `edges` table (which has FK constraints to entities), `graph_edges`\n * supports edges between any node types (session, batch, spore, entity).\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport crypto from 'node:crypto';\nimport { getDatabase } from '@myco/db/client.js';\nimport { QUERY_DEFAULT_LIST_LIMIT, GRAPH_EDGE_DEFAULT_CONFIDENCE, DEFAULT_MACHINE_ID } from '@myco/constants.js';\nimport { syncRow } from '@myco/db/queries/team-outbox.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default BFS traversal depth. */\nconst DEFAULT_BFS_DEPTH = 2;\n\n/** Maximum BFS traversal depth (capped for performance). */\nconst MAX_BFS_DEPTH = 5;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Valid node types in the graph. */\nexport type GraphNodeType = 'session' | 'batch' | 'spore' | 'entity';\n\n/** Lineage edge types (auto-created by daemon, no LLM). */\nexport type LineageEdgeType = 'FROM_SESSION' | 'EXTRACTED_FROM' | 'DERIVED_FROM' | 'HAS_BATCH';\n\n/** Semantic edge types (created by intelligence agent, LLM-driven). */\nexport type SemanticEdgeType = 'RELATES_TO' | 'SUPERSEDED_BY' | 'REFERENCES' | 'DEPENDS_ON' | 'AFFECTS';\n\n/** All valid graph edge types. */\nexport type GraphEdgeType = LineageEdgeType | SemanticEdgeType;\n\n/** Fields required (or optional) when inserting a graph edge. */\nexport interface GraphEdgeInsert {\n  agent_id: string;\n  source_id: string;\n  source_type: GraphNodeType;\n  target_id: string;\n  target_type: GraphNodeType;\n  type: GraphEdgeType;\n  created_at: number;\n  session_id?: string;\n  confidence?: number;\n  properties?: string;\n  machine_id?: string;\n}\n\n/** Row shape returned from graph edge queries. */\nexport interface GraphEdgeRow {\n  id: string;\n  agent_id: string;\n  source_id: string;\n  source_type: string;\n  target_id: string;\n  target_type: string;\n  type: string;\n  session_id: string | null;\n  confidence: number;\n  properties: string | null;\n  created_at: number;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n/** Filter options for `listGraphEdges`. */\nexport interface ListGraphEdgesOptions {\n  sourceId?: string;\n  targetId?: string;\n  type?: string;\n  agentId?: string;\n  limit?: number;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst GRAPH_EDGE_COLUMNS = [\n  'id',\n  'agent_id',\n  'source_id',\n  'source_type',\n  'target_id',\n  'target_type',\n  'type',\n  'session_id',\n  'confidence',\n  'properties',\n  'created_at',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = GRAPH_EDGE_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed GraphEdgeRow. */\nfunction toGraphEdgeRow(row: Record<string, unknown>): GraphEdgeRow {\n  return {\n    id: row.id as string,\n    agent_id: row.agent_id as string,\n    source_id: row.source_id as string,\n    source_type: row.source_type as string,\n    target_id: row.target_id as string,\n    target_type: row.target_type as string,\n    type: row.type as string,\n    session_id: (row.session_id as string) ?? null,\n    confidence: row.confidence as number,\n    properties: (row.properties as string) ?? null,\n    created_at: row.created_at as number,\n    machine_id: (row.machine_id as string) ?? DEFAULT_MACHINE_ID,\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new graph edge.\n *\n * Generates a UUID id automatically.\n */\nexport function insertGraphEdge(data: GraphEdgeInsert): GraphEdgeRow {\n  const db = getDatabase();\n  const id = crypto.randomUUID();\n\n  db.prepare(\n    `INSERT INTO graph_edges (\n       id, agent_id, source_id, source_type, target_id, target_type,\n       type, session_id, confidence, properties, created_at, machine_id\n     ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,\n  ).run(\n    id,\n    data.agent_id,\n    data.source_id,\n    data.source_type,\n    data.target_id,\n    data.target_type,\n    data.type,\n    data.session_id ?? null,\n    data.confidence ?? GRAPH_EDGE_DEFAULT_CONFIDENCE,\n    data.properties ?? null,\n    data.created_at,\n    data.machine_id ?? DEFAULT_MACHINE_ID,\n  );\n\n  const row = toGraphEdgeRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM graph_edges WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n\n  syncRow('graph_edges', row);\n\n  return row;\n}\n\n/**\n * List graph edges with optional filters, ordered by created_at DESC.\n */\nexport function listGraphEdges(\n  options: ListGraphEdgesOptions = {},\n): GraphEdgeRow[] {\n  const db = getDatabase();\n\n  const conditions: string[] = [];\n  const params: unknown[] = [];\n\n  if (options.sourceId !== undefined) {\n    conditions.push(`source_id = ?`);\n    params.push(options.sourceId);\n  }\n\n  if (options.targetId !== undefined) {\n    conditions.push(`target_id = ?`);\n    params.push(options.targetId);\n  }\n\n  if (options.type !== undefined) {\n    conditions.push(`type = ?`);\n    params.push(options.type);\n  }\n\n  if (options.agentId !== undefined) {\n    conditions.push(`agent_id = ?`);\n    params.push(options.agentId);\n  }\n\n  const where = conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '';\n  const limit = options.limit ?? QUERY_DEFAULT_LIST_LIMIT;\n\n  params.push(limit);\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM graph_edges\n     ${where}\n     ORDER BY created_at DESC\n     LIMIT ?`,\n  ).all(...params) as Record<string, unknown>[];\n\n  return rows.map(toGraphEdgeRow);\n}\n\n/**\n * BFS traversal from a node across graph edges.\n *\n * Returns all edges reachable within `depth` hops from the starting node.\n *\n * @param nodeId   - The starting node ID.\n * @param nodeType - The starting node type.\n * @param options  - Optional depth limit (default 2, max 5).\n */\nexport function getGraphForNode(\n  nodeId: string,\n  nodeType: GraphNodeType,\n  options?: { depth?: number },\n): { edges: GraphEdgeRow[] } {\n  const db = getDatabase();\n  const depth = Math.min(Math.max(options?.depth ?? DEFAULT_BFS_DEPTH, 1), MAX_BFS_DEPTH);\n\n  const seenEdgeIds = new Set<string>();\n  const collectedEdges: GraphEdgeRow[] = [];\n  const visited = new Set<string>([`${nodeType}:${nodeId}`]);\n  let frontier = new Set<string>([nodeId]);\n\n  for (let hop = 0; hop < depth; hop++) {\n    if (frontier.size === 0) break;\n\n    const frontierArray = Array.from(frontier);\n    const placeholders = frontierArray.map(() => `?`).join(', ');\n\n    const rows = db.prepare(\n      `SELECT ${SELECT_COLUMNS}\n       FROM graph_edges\n       WHERE source_id IN (${placeholders}) OR target_id IN (${placeholders})`,\n    ).all(...frontierArray, ...frontierArray) as Record<string, unknown>[];\n\n    const nextFrontier = new Set<string>();\n\n    for (const row of rows) {\n      const edge = toGraphEdgeRow(row);\n      if (!seenEdgeIds.has(edge.id)) {\n        seenEdgeIds.add(edge.id);\n        collectedEdges.push(edge);\n      }\n      const sourceKey = `${edge.source_type}:${edge.source_id}`;\n      const targetKey = `${edge.target_type}:${edge.target_id}`;\n      if (!visited.has(sourceKey)) {\n        visited.add(sourceKey);\n        nextFrontier.add(edge.source_id);\n      }\n      if (!visited.has(targetKey)) {\n        visited.add(targetKey);\n        nextFrontier.add(edge.target_id);\n      }\n    }\n\n    frontier = nextFrontier;\n  }\n\n  return { edges: collectedEdges };\n}\n","/**\n * Lineage edge creation helpers.\n *\n * Creates automatic graph edges when spores and batches are inserted.\n * These are structural (no LLM needed) — the daemon layer calls them.\n *\n * Edge types created:\n * - FROM_SESSION: spore -> session (the session it was extracted from)\n * - EXTRACTED_FROM: spore -> batch (the prompt batch it was extracted from)\n * - DERIVED_FROM: wisdom spore -> source spore (consolidation provenance)\n * - HAS_BATCH: session -> batch (prompt batch belongs to session)\n */\n\nimport { insertGraphEdge } from './graph-edges.js';\nimport {\n  EDGE_TYPE_FROM_SESSION,\n  EDGE_TYPE_EXTRACTED_FROM,\n  EDGE_TYPE_DERIVED_FROM,\n  EDGE_TYPE_HAS_BATCH,\n} from '@myco/constants.js';\n\n// ---------------------------------------------------------------------------\n// Spore lineage\n// ---------------------------------------------------------------------------\n\n/** Create lineage edges for a newly inserted spore. */\nexport function createSporeLineage(spore: {\n  id: string;\n  agent_id: string;\n  session_id?: string | null;\n  prompt_batch_id?: number | null;\n  observation_type?: string;\n  properties?: string | null;\n  created_at: number;\n}): void {\n  if (spore.session_id) {\n    insertGraphEdge({\n      agent_id: spore.agent_id,\n      source_id: spore.id,\n      source_type: 'spore',\n      target_id: spore.session_id,\n      target_type: 'session',\n      type: EDGE_TYPE_FROM_SESSION,\n      created_at: spore.created_at,\n    });\n  }\n\n  if (spore.prompt_batch_id != null) {\n    insertGraphEdge({\n      agent_id: spore.agent_id,\n      source_id: spore.id,\n      source_type: 'spore',\n      target_id: String(spore.prompt_batch_id),\n      target_type: 'batch',\n      type: EDGE_TYPE_EXTRACTED_FROM,\n      created_at: spore.created_at,\n    });\n  }\n\n  // DERIVED_FROM edges for wisdom spores\n  if (spore.observation_type === 'wisdom' && spore.properties) {\n    try {\n      const props = JSON.parse(spore.properties);\n      if (Array.isArray(props.consolidated_from)) {\n        for (const sourceId of props.consolidated_from) {\n          insertGraphEdge({\n            agent_id: spore.agent_id,\n            source_id: spore.id,\n            source_type: 'spore',\n            target_id: sourceId,\n            target_type: 'spore',\n            type: EDGE_TYPE_DERIVED_FROM,\n            created_at: spore.created_at,\n          });\n        }\n      }\n    } catch { /* ignore malformed properties */ }\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Batch lineage\n// ---------------------------------------------------------------------------\n\n/** Create a HAS_BATCH lineage edge from session to batch. */\nexport function createBatchLineage(\n  agentId: string,\n  sessionId: string,\n  batchId: number,\n  createdAt: number,\n): void {\n  insertGraphEdge({\n    agent_id: agentId,\n    source_id: sessionId,\n    source_type: 'session',\n    target_id: String(batchId),\n    target_type: 'batch',\n    type: EDGE_TYPE_HAS_BATCH,\n    created_at: createdAt,\n  });\n}\n","/**\n * Entity CRUD query helpers for the knowledge graph.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\nimport { DEFAULT_MACHINE_ID } from '@myco/constants.js';\nimport { getGraphForNode, type GraphEdgeRow } from '@myco/db/queries/graph-edges.js';\nimport { syncRow } from '@myco/db/queries/team-outbox.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of entities returned by listEntities when no limit given. */\nconst DEFAULT_LIST_LIMIT = 100;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting an entity. */\nexport interface EntityInsert {\n  id: string;\n  agent_id: string;\n  type: string;\n  name: string;\n  first_seen: number;\n  last_seen: number;\n  properties?: string | null;\n  machine_id?: string;\n}\n\n/** Row shape returned from entity queries (all columns). */\nexport interface EntityRow {\n  id: string;\n  agent_id: string;\n  type: string;\n  name: string;\n  properties: string | null;\n  first_seen: number;\n  last_seen: number;\n  status: string;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n/** Filter options for `listEntities`. */\nexport interface ListEntitiesOptions {\n  agent_id?: string;\n  type?: string;\n  /** Filter by exact entity name. */\n  name?: string;\n  /** Filter by status (default 'active'). */\n  status?: string;\n  /** Filter by entity_mentions subquery — must be paired with note_type. */\n  mentioned_in?: string;\n  /** Required when mentioned_in is provided. */\n  note_type?: string;\n  limit?: number;\n  offset?: number;\n}\n\n/** Return type for `getEntityWithEdges`. */\nexport interface EntityGraph {\n  center: EntityRow;\n  nodes: EntityRow[];\n  edges: GraphEdgeRow[];\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst ENTITY_COLUMNS = [\n  'id',\n  'agent_id',\n  'type',\n  'name',\n  'properties',\n  'first_seen',\n  'last_seen',\n  'status',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = ENTITY_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed EntityRow. */\nfunction toEntityRow(row: Record<string, unknown>): EntityRow {\n  return {\n    id: row.id as string,\n    agent_id: row.agent_id as string,\n    type: row.type as string,\n    name: row.name as string,\n    properties: (row.properties as string) ?? null,\n    first_seen: row.first_seen as number,\n    last_seen: row.last_seen as number,\n    status: (row.status as string) ?? 'active',\n    machine_id: (row.machine_id as string) ?? DEFAULT_MACHINE_ID,\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert or update an entity. Uses UPSERT on (agent_id, type, name).\n *\n * On conflict, updates properties (if provided) and last_seen.\n */\nexport function insertEntity(data: EntityInsert): EntityRow {\n  const db = getDatabase();\n\n  db.prepare(\n    `INSERT INTO entities (id, agent_id, type, name, properties, first_seen, last_seen, machine_id)\n     VALUES (?, ?, ?, ?, ?, ?, ?, ?)\n     ON CONFLICT (agent_id, type, name) DO UPDATE SET\n       properties = COALESCE(EXCLUDED.properties, entities.properties),\n       last_seen = EXCLUDED.last_seen`,\n  ).run(\n    data.id,\n    data.agent_id,\n    data.type,\n    data.name,\n    data.properties ?? null,\n    data.first_seen,\n    data.last_seen,\n    data.machine_id ?? DEFAULT_MACHINE_ID,\n  );\n\n  // On conflict, the passed-in id may not be the actual row id. Look up by unique key.\n  const row = toEntityRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM entities WHERE agent_id = ? AND type = ? AND name = ?`).get(\n      data.agent_id,\n      data.type,\n      data.name,\n    ) as Record<string, unknown>,\n  );\n\n  syncRow('entities', row);\n\n  return row;\n}\n\n/**\n * Retrieve a single entity by id.\n *\n * @returns the entity row, or null if not found.\n */\nexport function getEntity(id: string): EntityRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM entities WHERE id = ?`,\n  ).get(id) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toEntityRow(row);\n}\n\n/**\n * List entities with optional filters, ordered by last_seen DESC.\n *\n * Defaults to `status = 'active'` — archived entities are excluded unless\n * `status` is explicitly provided. Pass `status: undefined` in options to\n * get only active entities (the default), or set a specific status string.\n *\n * When both `mentioned_in` and `note_type` are provided, filters to entities\n * referenced in a specific note via the entity_mentions subquery.\n */\nexport function listEntities(\n  options: ListEntitiesOptions = {},\n): EntityRow[] {\n  const db = getDatabase();\n\n  const conditions: string[] = [];\n  const params: unknown[] = [];\n\n  if (options.agent_id !== undefined) {\n    conditions.push(`agent_id = ?`);\n    params.push(options.agent_id);\n  }\n\n  if (options.type !== undefined) {\n    conditions.push(`type = ?`);\n    params.push(options.type);\n  }\n\n  if (options.name !== undefined) {\n    conditions.push(`name = ?`);\n    params.push(options.name);\n  }\n\n  // Default: only show active entities (status column added in v5)\n  if (options.status !== undefined) {\n    conditions.push(`status = ?`);\n    params.push(options.status);\n  } else {\n    conditions.push(`status = ?`);\n    params.push('active');\n  }\n\n  if (options.mentioned_in !== undefined && options.note_type !== undefined) {\n    conditions.push(\n      `id IN (SELECT entity_id FROM entity_mentions WHERE note_id = ? AND note_type = ?)`,\n    );\n    params.push(options.mentioned_in);\n    params.push(options.note_type);\n  }\n\n  const where = conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '';\n  const limit = options.limit ?? DEFAULT_LIST_LIMIT;\n  const offset = options.offset ?? 0;\n\n  params.push(limit);\n  params.push(offset);\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM entities\n     ${where}\n     ORDER BY last_seen DESC\n     LIMIT ?\n     OFFSET ?`,\n  ).all(...params) as Record<string, unknown>[];\n\n  return rows.map(toEntityRow);\n}\n\n/**\n * Fetch an entity and its surrounding graph via BFS traversal.\n *\n * Delegates to `getGraphForNode` (graph_edges table) for the BFS,\n * then fetches entity rows for all connected entity nodes.\n *\n * @param entityId - The center entity to expand from.\n * @param depth    - Number of hops to traverse (1-3, default 1).\n * @returns `{ center, nodes, edges }` where nodes are all connected entities\n *          (excluding center) and edges are deduplicated across BFS iterations.\n */\nexport function getEntityWithEdges(\n  entityId: string,\n  depth = 1,\n): EntityGraph | null {\n  const db = getDatabase();\n\n  const center = getEntity(entityId);\n  if (center === null) return null;\n\n  const clampedDepth = Math.min(Math.max(depth, 1), 3);\n  const graph = getGraphForNode(entityId, 'entity', { depth: clampedDepth });\n\n  // Collect all entity node IDs from edges (excluding center)\n  const nodeIdSet = new Set<string>();\n  for (const edge of graph.edges) {\n    if (edge.source_type === 'entity' && edge.source_id !== entityId) nodeIdSet.add(edge.source_id);\n    if (edge.target_type === 'entity' && edge.target_id !== entityId) nodeIdSet.add(edge.target_id);\n  }\n\n  // Fetch all connected entity nodes\n  const nodeIds = Array.from(nodeIdSet);\n  let nodes: EntityRow[] = [];\n  if (nodeIds.length > 0) {\n    const placeholders = nodeIds.map(() => `?`).join(', ');\n    const nodeRows = db.prepare(\n      `SELECT ${SELECT_COLUMNS} FROM entities WHERE id IN (${placeholders})`,\n    ).all(...nodeIds) as Record<string, unknown>[];\n    nodes = nodeRows.map(toEntityRow);\n  }\n\n  return { center, nodes, edges: graph.edges };\n}\n","/**\n * Digest extract CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\nimport { DIGEST_TIERS, DEFAULT_MACHINE_ID } from '@myco/constants.js';\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required when upserting a digest extract. */\nexport interface DigestExtractUpsert {\n  agent_id: string;\n  tier: number;\n  content: string;\n  generated_at: number;\n  machine_id?: string;\n}\n\n/** Row shape returned from digest_extracts queries (all columns). */\nexport interface DigestExtractRow {\n  id: number;\n  agent_id: string;\n  tier: number;\n  content: string;\n  substrate_hash: string | null;\n  generated_at: number;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst EXTRACT_COLUMNS = [\n  'id',\n  'agent_id',\n  'tier',\n  'content',\n  'substrate_hash',\n  'generated_at',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = EXTRACT_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed DigestExtractRow. */\nfunction toDigestExtractRow(row: Record<string, unknown>): DigestExtractRow {\n  return {\n    id: row.id as number,\n    agent_id: row.agent_id as string,\n    tier: row.tier as number,\n    content: row.content as string,\n    substrate_hash: (row.substrate_hash as string) ?? null,\n    generated_at: row.generated_at as number,\n    machine_id: (row.machine_id as string) ?? DEFAULT_MACHINE_ID,\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Upsert a digest extract. Uses ON CONFLICT on (agent_id, tier).\n *\n * Creates or updates the extract for the given agent and token tier.\n * Uses lastInsertRowid for SERIAL PK on insert, or falls back to\n * SELECT for the conflict (update) case.\n */\nexport function upsertDigestExtract(\n  data: DigestExtractUpsert,\n): DigestExtractRow {\n  const db = getDatabase();\n\n  db.prepare(\n    `INSERT INTO digest_extracts (agent_id, tier, content, generated_at)\n     VALUES (?, ?, ?, ?)\n     ON CONFLICT (agent_id, tier) DO UPDATE SET\n       content = EXCLUDED.content,\n       generated_at = EXCLUDED.generated_at`,\n  ).run(data.agent_id, data.tier, data.content, data.generated_at);\n\n  // Always look up by composite unique key — works for both insert and update cases.\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM digest_extracts WHERE agent_id = ? AND tier = ?`,\n  ).get(data.agent_id, data.tier);\n\n  return toDigestExtractRow(row as Record<string, unknown>);\n}\n\n/**\n * Get a digest extract for a specific agent and tier.\n *\n * @returns the extract row, or null if not found.\n */\nexport function getDigestExtract(\n  agentId: string,\n  tier: number,\n): DigestExtractRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM digest_extracts\n     WHERE agent_id = ? AND tier = ?`,\n  ).get(agentId, tier) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toDigestExtractRow(row);\n}\n\n/**\n * List digest extracts for an agent, filtered to configured tiers, ordered by tier ASC.\n */\nexport function listDigestExtracts(\n  agentId: string,\n): DigestExtractRow[] {\n  const db = getDatabase();\n  const tierPlaceholders = DIGEST_TIERS.map(() => '?').join(', ');\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM digest_extracts\n     WHERE agent_id = ? AND tier IN (${tierPlaceholders})\n     ORDER BY tier ASC`,\n  ).all(agentId, ...DIGEST_TIERS) as Record<string, unknown>[];\n\n  return 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package/dist/{chunk-U3IBO3O3.js → chunk-FMIWFRAM.js}

@@ -4,10 +4,10 @@ import {
 } from "./chunk-V7XG6V6C.js";
 import {
   readStdin
-} from "./chunk-XNOCTDHF.js";
+} from "./chunk-J4RVYUH4.js";
 import {
   DaemonClient
-} from "./chunk-TRUJLI6K.js";
+} from "./chunk-YZMNEIFI.js";
 import {
   resolveVaultDir
 } from "./chunk-JTYZRPX5.js";
@@ -38,4 +38,4 @@ async function sendEvent(hookName, buildEvent) {
 export {
   sendEvent
 };
-//# sourceMappingURL=chunk-U3IBO3O3.js.map
+//# sourceMappingURL=chunk-FMIWFRAM.js.map

package/dist/{chunk-KYLDNM7H.js → chunk-FPMEIN2W.js}

@@ -2,7 +2,7 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   EMBEDDING_REQUEST_TIMEOUT_MS,
   PROVIDER_DETECT_TIMEOUT_MS
-} from "./chunk-5VZ52A4T.js";
+} from "./chunk-76ZO5RGT.js";
 
 // src/cli/providers/cloud-embedding-base.ts
 var ERROR_BODY_PREVIEW_CHARS = 500;
@@ -63,4 +63,4 @@ var CloudEmbeddingBase = class {
 export {
   CloudEmbeddingBase
 };
-//# sourceMappingURL=chunk-KYLDNM7H.js.map
+//# sourceMappingURL=chunk-FPMEIN2W.js.map

package/dist/{chunk-PB6TOLRQ.js → chunk-G2LQBFE3.js}

@@ -11,7 +11,7 @@ var cached;
 function getPluginVersion() {
   if (cached) return cached;
   if (true) {
-    cached = "0.9.0";
+    cached = "0.10.0";
     return cached;
   }
   const root = findPackageRoot(path.dirname(fileURLToPath(import.meta.url)));
@@ -32,4 +32,4 @@ function getPluginVersion() {
 export {
   getPluginVersion
 };
-//# sourceMappingURL=chunk-PB6TOLRQ.js.map
+//# sourceMappingURL=chunk-G2LQBFE3.js.map

package/dist/{chunk-XNOCTDHF.js → chunk-J4RVYUH4.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   STDIN_TIMEOUT_MS
-} from "./chunk-5VZ52A4T.js";
+} from "./chunk-76ZO5RGT.js";
 
 // src/hooks/read-stdin.ts
 function readStdin() {
@@ -18,4 +18,4 @@ function readStdin() {
 export {
   readStdin
 };
-//# sourceMappingURL=chunk-XNOCTDHF.js.map
+//# sourceMappingURL=chunk-J4RVYUH4.js.map

package/dist/{chunk-MHSCMET3.js → chunk-MAZOVVDU.js}

@@ -72,6 +72,20 @@ var AgentSchema = external_exports.object({
   /** Per-task overrides keyed by task name. */
   tasks: external_exports.record(external_exports.string(), TaskProviderOverrideSchema).optional()
 });
+var BackupSchema = external_exports.object({
+  /** Override directory for backup files (absolute path). When unset, defaults to {vaultDir}/backups. */
+  dir: external_exports.string().optional()
+});
+var TeamSchema = external_exports.object({
+  /** Whether team sync is enabled. */
+  enabled: external_exports.boolean().default(false),
+  /** Cloudflare Worker URL for team sync. */
+  worker_url: external_exports.string().url().optional(),
+  /** Team identifier for sync grouping. */
+  team_id: external_exports.string().optional(),
+  /** Sync interval in minutes. */
+  interval_minutes: external_exports.number().int().min(1).max(1440).default(15)
+});
 var MycoConfigSchema = external_exports.preprocess(
   (raw) => {
     if (raw && typeof raw === "object" && "curation" in raw && !("agent" in raw)) {
@@ -87,7 +101,9 @@ var MycoConfigSchema = external_exports.preprocess(
     daemon: DaemonSchema.default(() => DaemonSchema.parse({})),
     capture: CaptureSchema.default(() => CaptureSchema.parse({})),
     agent: AgentSchema.default(() => AgentSchema.parse({})),
-    context: ContextSchema.default(() => ContextSchema.parse({}))
+    context: ContextSchema.default(() => ContextSchema.parse({})),
+    backup: BackupSchema.default(() => BackupSchema.parse({})),
+    team: TeamSchema.default(() => TeamSchema.parse({}))
   })
 );
 
@@ -264,12 +280,26 @@ function updateConfig(vaultDir, fn) {
   saveConfig(vaultDir, updated);
   return updated;
 }
+function updateBackupConfig(vaultDir, backup) {
+  return updateConfig(vaultDir, (config) => ({
+    ...config,
+    backup: { ...config.backup, ...backup }
+  }));
+}
+function updateTeamConfig(vaultDir, team) {
+  return updateConfig(vaultDir, (config) => ({
+    ...config,
+    team: { ...config.team, ...team }
+  }));
+}
 
 export {
   MycoConfigSchema,
   CONFIG_FILENAME,
   loadConfig,
   saveConfig,
-  updateConfig
+  updateConfig,
+  updateBackupConfig,
+  updateTeamConfig
 };
-//# sourceMappingURL=chunk-MHSCMET3.js.map
+//# sourceMappingURL=chunk-MAZOVVDU.js.map

package/dist/chunk-MAZOVVDU.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/config/loader.ts","../src/config/schema.ts","../src/config/migrations.ts"],"sourcesContent":["import fs from 'node:fs';\nimport path from 'node:path';\nimport YAML from 'yaml';\nimport { MycoConfigSchema, type MycoConfig, type BackupConfig, type TeamConfig } from './schema.js';\nimport { runMigrations, CURRENT_MIGRATION_VERSION } from './migrations.js';\n\nexport const CONFIG_FILENAME = 'myco.yaml';\n\nexport function loadConfig(vaultDir: string): MycoConfig {\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n\n  if (!fs.existsSync(configPath)) {\n    throw new Error(`myco.yaml not found in ${vaultDir}`);\n  }\n\n  const raw = fs.readFileSync(configPath, 'utf-8');\n  const parsed = YAML.parse(raw) as Record<string, unknown>;\n\n  // Detect v1 config and guide migration\n  if (parsed.version === 1 || (parsed.intelligence as Record<string, unknown>)?.backend) {\n    throw new Error(\n      'Myco config uses v1 format. Run /myco:setup-llm to reconfigure for v2.',\n    );\n  }\n\n  // --- v2 → v3 migration ---\n  let v2Migrated = false;\n  if (parsed.version === 2) {\n    // Extract intelligence.embedding to top-level embedding\n    const intel = parsed.intelligence as Record<string, unknown> | undefined;\n    const embeddingConfig = intel?.embedding as Record<string, unknown> | undefined;\n    if (embeddingConfig && !parsed.embedding) {\n      // Map v2 'lm-studio' to v3 'openai-compatible' for embedding provider\n      if (embeddingConfig.provider === 'lm-studio') {\n        embeddingConfig.provider = 'openai-compatible';\n      }\n      parsed.embedding = embeddingConfig;\n    }\n\n    // Keep daemon.port and daemon.log_level, drop grace_period and max_log_size\n    const daemon = parsed.daemon as Record<string, unknown> | undefined;\n    if (daemon) {\n      const { port, log_level } = daemon;\n      parsed.daemon = { port: port ?? null, log_level: log_level ?? 'info' };\n    }\n\n    // Keep capture basics, drop token-related fields; migrate artifact_watch → plan_dirs\n    const capture = parsed.capture as Record<string, unknown> | undefined;\n    if (capture) {\n      const { transcript_paths, artifact_watch, plan_dirs, artifact_extensions, buffer_max_events } = capture;\n      parsed.capture = {\n        transcript_paths,\n        plan_dirs: plan_dirs ?? artifact_watch,\n        artifact_extensions,\n        buffer_max_events,\n      };\n    }\n\n    // Drop removed top-level sections\n    delete parsed.intelligence;\n    delete parsed.context;\n    delete parsed.team;\n    delete parsed.digest;\n    delete parsed.pipeline;\n\n    // Set version to 3\n    parsed.version = 3;\n    v2Migrated = true;\n\n    process.stderr.write('[myco migration] Migrated config from v2 to v3\\n');\n  }\n\n  // Run numbered migrations (for v3+ forward migrations)\n  const migrationsRan = runMigrations(parsed, vaultDir, (msg) => {\n    process.stderr.write(`[myco migration] ${msg}\\n`);\n  });\n\n  // Parse with Zod to fill in defaults for new config sections\n  const config = MycoConfigSchema.parse(parsed);\n\n  // Write back if v2→v3 migration ran, numbered migrations ran, or new defaults were added\n  const needsWrite = v2Migrated\n    || migrationsRan\n    || (parsed.config_version as number ?? 0) < CURRENT_MIGRATION_VERSION\n    || parsed.version !== config.version;\n\n  if (needsWrite) {\n    const fullConfig = JSON.parse(JSON.stringify(config)) as Record<string, unknown>;\n    fs.writeFileSync(configPath, YAML.stringify(fullConfig), 'utf-8');\n  }\n\n  return config;\n}\n\nexport function saveConfig(vaultDir: string, config: MycoConfig): void {\n  // Validate before writing — OAK lesson: validate on write, not just read\n  const validated = MycoConfigSchema.parse(config);\n\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n  fs.mkdirSync(vaultDir, { recursive: true });\n  fs.writeFileSync(configPath, YAML.stringify(validated), 'utf-8');\n}\n\nexport function updateConfig(\n  vaultDir: string,\n  fn: (config: MycoConfig) => MycoConfig,\n): MycoConfig {\n  const current = loadConfig(vaultDir);\n  const updated = fn(current);\n  saveConfig(vaultDir, updated);\n  return updated;\n}\n\nexport function updateBackupConfig(\n  vaultDir: string,\n  backup: Partial<BackupConfig>,\n): MycoConfig {\n  return updateConfig(vaultDir, (config) => ({\n    ...config,\n    backup: { ...config.backup, ...backup },\n  }));\n}\n\nexport function updateTeamConfig(\n  vaultDir: string,\n  team: Partial<TeamConfig>,\n): MycoConfig {\n  return updateConfig(vaultDir, (config) => ({\n    ...config,\n    team: { ...config.team, ...team },\n  }));\n}\n","import { z } from 'zod';\n\nconst EmbeddingProviderSchema = z.object({\n  provider: z.enum(['ollama', 'openai-compatible', 'openrouter', 'openai']).default('ollama'),\n  model: z.string().default('bge-m3'),\n  base_url: z.string().url().optional(),\n});\n\nconst DaemonSchema = z.object({\n  port: z.number().int().min(1024).max(65535).nullable().default(null),\n  log_level: z.enum(['debug', 'info', 'warn', 'error']).default('info'),\n  log_retention_days: z.number().int().min(1).max(365).default(30),\n});\n\nconst CaptureSchema = z.object({\n  transcript_paths: z.array(z.string()).default([]),\n  plan_dirs: z.array(z.string()).default([]),\n  artifact_extensions: z.array(z.string()).default(['.md']),\n  buffer_max_events: z.number().int().positive().default(500),\n});\n\n/** Provider config shape used in both task-level and phase-level overrides. */\nconst ProviderOverrideSchema = z.object({\n  type: z.enum(['cloud', 'ollama', 'lmstudio']),\n  base_url: z.string().optional(),\n  model: z.string().optional(),\n  /** Context window size for local models (Ollama num_ctx, LM Studio context_length). */\n  context_length: z.number().int().positive().optional(),\n});\n\n/** Per-phase overrides within a task — keyed by phase name. */\nconst PhaseOverrideSchema = z.object({\n  provider: ProviderOverrideSchema.optional(),\n  model: z.string().optional(),\n  maxTurns: z.number().int().positive().optional(),\n});\n\n/** Per-task config override — stored in myco.yaml under agent.tasks. */\nconst TaskProviderOverrideSchema = z.object({\n  provider: ProviderOverrideSchema.optional(),\n  model: z.string().optional(),\n  maxTurns: z.number().int().positive().optional(),\n  timeoutSeconds: z.number().int().positive().optional(),\n  phases: z.record(z.string(), PhaseOverrideSchema).optional(),\n});\n\nconst ContextSchema = z.object({\n  /** Which digest tier to inject at session start. */\n  digest_tier: z.number().int().default(5000),\n  /** Enable semantic spore search on each user prompt. */\n  prompt_search: z.boolean().default(true),\n  /** Max spores to inject per prompt (0-10). */\n  prompt_max_spores: z.number().int().min(0).max(10).default(3),\n});\n\nconst AgentSchema = z.object({\n  /** Whether the daemon automatically runs the agent on unprocessed batches. */\n  auto_run: z.boolean().default(true),\n  /** Seconds between agent timer checks. */\n  interval_seconds: z.number().int().positive().default(300),\n  /** Number of batches between event-driven summary triggers (0 to disable). */\n  summary_batch_interval: z.number().int().min(0).default(5),\n  /** Global default provider — applies to all tasks unless overridden per-task. */\n  provider: ProviderOverrideSchema.optional(),\n  /** Global default model — applies to all tasks unless overridden per-task. */\n  model: z.string().optional(),\n  /** Per-task overrides keyed by task name. */\n  tasks: z.record(z.string(), TaskProviderOverrideSchema).optional(),\n});\n\nconst BackupSchema = z.object({\n  /** Override directory for backup files (absolute path). When unset, defaults to {vaultDir}/backups. */\n  dir: z.string().optional(),\n});\n\nconst TeamSchema = z.object({\n  /** Whether team sync is enabled. */\n  enabled: z.boolean().default(false),\n  /** Cloudflare Worker URL for team sync. */\n  worker_url: z.string().url().optional(),\n  /** Team identifier for sync grouping. */\n  team_id: z.string().optional(),\n  /** Sync interval in minutes. */\n  interval_minutes: z.number().int().min(1).max(1440).default(15),\n});\n\nexport const MycoConfigSchema = z.preprocess(\n  (raw: unknown) => {\n    if (raw && typeof raw === 'object' && 'curation' in raw && !('agent' in raw)) {\n      const { curation, ...rest } = raw as Record<string, unknown>;\n      return { ...rest, agent: curation };\n    }\n    return raw;\n  },\n  z.object({\n    version: z.literal(3),\n    config_version: z.number().int().nonnegative().default(0),\n    embedding: EmbeddingProviderSchema.default(() => EmbeddingProviderSchema.parse({})),\n    daemon: DaemonSchema.default(() => DaemonSchema.parse({})),\n    capture: CaptureSchema.default(() => CaptureSchema.parse({})),\n    agent: AgentSchema.default(() => AgentSchema.parse({})),\n    context: ContextSchema.default(() => ContextSchema.parse({})),\n    backup: BackupSchema.default(() => BackupSchema.parse({})),\n    team: TeamSchema.default(() => TeamSchema.parse({})),\n  }),\n);\n\nexport type MycoConfig = z.output<typeof MycoConfigSchema>;\nexport type EmbeddingProviderConfig = z.infer<typeof EmbeddingProviderSchema>;\nexport type TaskProviderOverride = z.infer<typeof TaskProviderOverrideSchema>;\nexport type PhaseOverride = z.infer<typeof PhaseOverrideSchema>;\nexport type ContextConfig = z.infer<typeof ContextSchema>;\nexport type BackupConfig = z.infer<typeof BackupSchema>;\nexport type TeamConfig = z.infer<typeof TeamSchema>;\n","/**\n * Config and vault migrations — run once per version, tracked by config_version.\n *\n * Each migration has a version number, a name, and a function that receives\n * the raw parsed YAML doc and the vault directory. Migrations run in order\n * and are skipped if config_version is already past them.\n *\n * To add a new migration:\n * 1. Add an entry to MIGRATIONS with the next version number\n * 2. Write the migrate function — it receives the mutable doc and vaultDir\n * 3. The framework handles version tracking and writing the config back\n */\n\nimport fs from 'node:fs';\nimport path from 'node:path';\n\nexport interface Migration {\n  version: number;\n  name: string;\n  migrate: (doc: Record<string, unknown>, vaultDir: string) => void;\n}\n\n/** Regex matching both quoted and unquoted YAML: type: memory, type: \"memory\", type: 'memory' */\nconst MEMORY_TYPE_PATTERN = /type:\\s*[\"']?memory[\"']?/g;\n\nexport const MIGRATIONS: Migration[] = [\n  {\n    version: 1,\n    name: 'rename-memories-to-spores',\n    migrate: (doc, vaultDir) => {\n      // Config: rename context.layers.memories → context.layers.spores\n      const context = doc.context as Record<string, unknown> | undefined;\n      const layers = context?.layers as Record<string, unknown> | undefined;\n      if (layers && 'memories' in layers && !('spores' in layers)) {\n        layers.spores = layers.memories;\n        delete layers.memories;\n      }\n\n      // Vault: rename memories/ directory → spores/\n      const memoriesDir = path.join(vaultDir, 'memories');\n      const sporesDir = path.join(vaultDir, 'spores');\n\n      if (!fs.existsSync(memoriesDir)) return;\n\n      if (fs.existsSync(sporesDir)) {\n        // Both exist (interrupted migration) — merge remaining files\n        const moveRemaining = (srcDir: string, destDir: string): void => {\n          for (const entry of fs.readdirSync(srcDir, { withFileTypes: true })) {\n            const srcPath = path.join(srcDir, entry.name);\n            const destPath = path.join(destDir, entry.name);\n            if (entry.isDirectory()) {\n              if (!fs.existsSync(destPath)) fs.mkdirSync(destPath, { recursive: true });\n              moveRemaining(srcPath, destPath);\n            } else if (!fs.existsSync(destPath)) {\n              fs.renameSync(srcPath, destPath);\n            }\n          }\n        };\n        moveRemaining(memoriesDir, sporesDir);\n        fs.rmSync(memoriesDir, { recursive: true, force: true });\n      } else {\n        fs.renameSync(memoriesDir, sporesDir);\n      }\n\n      // Update frontmatter type: memory → type: spore (handles quoted and unquoted)\n      const walkUpdate = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkUpdate(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          MEMORY_TYPE_PATTERN.lastIndex = 0;\n          if (MEMORY_TYPE_PATTERN.test(content)) {\n            MEMORY_TYPE_PATTERN.lastIndex = 0;\n            fs.writeFileSync(fullPath, content.replace(MEMORY_TYPE_PATTERN, 'type: spore'));\n          }\n        }\n      };\n      walkUpdate(sporesDir);\n\n      // Legacy: update wikilink references in Markdown files (pre-SQLite migration): [[memories/...]] → [[spores/...]]\n      const walkLinks = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkLinks(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          if (content.includes('memories/')) {\n            fs.writeFileSync(fullPath, content.replace(/memories\\//g, 'spores/'));\n          }\n        }\n      };\n      walkLinks(vaultDir);\n    },\n  },\n  {\n    version: 2,\n    name: 'consolidation-boolean-to-object',\n    migrate: (doc) => {\n      const digest = doc.digest as Record<string, unknown> | undefined;\n      if (!digest) return;\n\n      const consolidation = digest.consolidation;\n      if (typeof consolidation === 'boolean') {\n        digest.consolidation = { enabled: consolidation, max_tokens: 2048 };\n      }\n    },\n  },\n];\n\n/** Current migration version — the highest version in MIGRATIONS. */\nexport const CURRENT_MIGRATION_VERSION = MIGRATIONS[MIGRATIONS.length - 1]?.version ?? 0;\n\n/**\n * Run all pending migrations on the raw config doc.\n * Returns true if any migrations ran (caller should reindex).\n */\nexport function runMigrations(\n  doc: Record<string, unknown>,\n  vaultDir: string,\n  log?: (message: string) => void,\n): boolean {\n  const currentVersion = (doc.config_version as number) ?? 0;\n  let ran = false;\n\n  for (const migration of MIGRATIONS) {\n    if (migration.version <= currentVersion) continue;\n\n    migration.migrate(doc, vaultDir);\n    doc.config_version = migration.version;\n    ran = true;\n  }\n\n  if (ran) {\n    const from = currentVersion;\n    const to = (doc.config_version as number) ?? 0;\n    log?.(`Migrated config from v${from} to v${to}`);\n  }\n\n  return 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package/dist/{chunk-JYOOJCPQ.js → chunk-MKKXCCQ5.js}

@@ -1,17 +1,17 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   OpenRouterEmbeddingProvider
-} from "./chunk-46PWOKSI.js";
+} from "./chunk-AEJS57ZK.js";
 import {
   OpenAIEmbeddingProvider
-} from "./chunk-RJ6ZQKG5.js";
+} from "./chunk-5QERXFH7.js";
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-UBZPD4HN.js";
+} from "./chunk-5SDH75YC.js";
 import {
   LLM_REQUEST_TIMEOUT_MS
-} from "./chunk-5VZ52A4T.js";
+} from "./chunk-76ZO5RGT.js";
 
 // node_modules/@anthropic-ai/sdk/internal/tslib.mjs
 function __classPrivateFieldSet(receiver, state, value, kind, f) {
@@ -4929,4 +4929,4 @@ export {
   createLlmProvider,
   createEmbeddingProvider
 };
-//# sourceMappingURL=chunk-JYOOJCPQ.js.map
+//# sourceMappingURL=chunk-MKKXCCQ5.js.map

package/dist/{chunk-QIK2XSDQ.js → chunk-MSXYUXZR.js}

@@ -1,16 +1,16 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   isProcessAlive
-} from "./chunk-KB4DGYIY.js";
+} from "./chunk-WXSJKESH.js";
 import {
   loadConfig
-} from "./chunk-MHSCMET3.js";
+} from "./chunk-MAZOVVDU.js";
 import {
   getDatabase
 } from "./chunk-MYX5NCRH.js";
 import {
   DIGEST_TIERS
-} from "./chunk-5VZ52A4T.js";
+} from "./chunk-76ZO5RGT.js";
 
 // src/db/queries/embeddings.ts
 var EMBEDDABLE_TABLES = ["sessions", "spores", "plans", "artifacts"];
@@ -184,4 +184,4 @@ export {
   getEmbeddingQueueDepth,
   gatherStats
 };
-//# sourceMappingURL=chunk-QIK2XSDQ.js.map
+//# sourceMappingURL=chunk-MSXYUXZR.js.map

package/dist/{chunk-FFAYUQ5N.js → chunk-RJMXDUMA.js}

@@ -33,7 +33,8 @@ function loadSecrets(vaultDir) {
 }
 
 export {
+  readSecrets,
   writeSecret,
   loadSecrets
 };
-//# sourceMappingURL=chunk-FFAYUQ5N.js.map
+//# sourceMappingURL=chunk-RJMXDUMA.js.map

package/dist/{chunk-WGTCA2NU.js → chunk-S6I62FAH.js}

@@ -70,7 +70,15 @@ var LOG_KINDS = {
   // MCP
   MCP_EVENT: "mcp.event",
   // Log retention
-  LOG_RETENTION: "log.retention"
+  LOG_RETENTION: "log.retention",
+  // Backup
+  BACKUP_START: "backup.start",
+  BACKUP_COMPLETE: "backup.complete",
+  BACKUP_ERROR: "backup.error",
+  // Team sync
+  TEAM_SYNC_START: "team-sync.start",
+  TEAM_SYNC_COMPLETE: "team-sync.complete",
+  TEAM_SYNC_ERROR: "team-sync.error"
 };
 function kindToComponent(kind) {
   const dot = kind.indexOf(".");
@@ -81,4 +89,4 @@ export {
   LOG_KINDS,
   kindToComponent
 };
-//# sourceMappingURL=chunk-WGTCA2NU.js.map
+//# sourceMappingURL=chunk-S6I62FAH.js.map