@goondocks/myco 0.6.3 → 0.6.5

package/dist/{chunk-CK24O5YQ.js → chunk-XH34FX4C.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   AgentRegistry
-} from "./chunk-RNWALAFP.js";
+} from "./chunk-F7GAYVWF.js";
 
 // src/version.ts
 import fs from "fs";
@@ -40,4 +40,4 @@ function readVersionFrom(dir) {
 export {
   getPluginVersion
 };
-//# sourceMappingURL=chunk-CK24O5YQ.js.map
+//# sourceMappingURL=chunk-XH34FX4C.js.map

package/dist/{chunk-4WL5X7VS.js → chunk-YRIIBPJD.js}

@@ -2,10 +2,10 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-25FY74AP.js";
+} from "./chunk-4DYD4HHG.js";
 import {
   AgentRegistry
-} from "./chunk-RNWALAFP.js";
+} from "./chunk-F7GAYVWF.js";
 
 // src/cli/shared.ts
 import fs from "fs";
@@ -83,4 +83,4 @@ export {
   VAULT_GITIGNORE,
   configureVaultEnv
 };
-//# sourceMappingURL=chunk-4WL5X7VS.js.map
+//# sourceMappingURL=chunk-YRIIBPJD.js.map

package/dist/{cli-EGWAINIE.js → cli-OJYHLO4Y.js}

@@ -2,14 +2,14 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   loadEnv
-} from "./chunk-4WL5X7VS.js";
+} from "./chunk-YRIIBPJD.js";
 import "./chunk-SAKJMNSR.js";
-import "./chunk-25FY74AP.js";
+import "./chunk-4DYD4HHG.js";
 import {
   resolveVaultDir
 } from "./chunk-N33KUCFP.js";
-import "./chunk-RNWALAFP.js";
-import "./chunk-WBLTISAK.js";
+import "./chunk-F7GAYVWF.js";
+import "./chunk-DYDBF5W6.js";
 import "./chunk-PZUWP5VK.js";
 
 // src/cli.ts
@@ -43,10 +43,10 @@ async function main() {
     process.stdout.write(USAGE);
     return;
   }
-  if (cmd === "init") return (await import("./init-ZO2XQT6U.js")).run(args);
-  if (cmd === "detect-providers") return (await import("./detect-providers-4U3ZPW5G.js")).run(args);
+  if (cmd === "init") return (await import("./init-3LVKVQ4L.js")).run(args);
+  if (cmd === "detect-providers") return (await import("./detect-providers-LFIVJYQO.js")).run(args);
   if (cmd === "version" || cmd === "--version" || cmd === "-v") {
-    const { getPluginVersion } = await import("./version-NKOECSVH.js");
+    const { getPluginVersion } = await import("./version-XE4GYTBV.js");
     console.log(getPluginVersion());
     return;
   }
@@ -57,33 +57,33 @@ async function main() {
   }
   switch (cmd) {
     case "config":
-      return (await import("./config-HDUFDOQN.js")).run(args, vaultDir);
+      return (await import("./config-IBS6KOLQ.js")).run(args, vaultDir);
     case "curate":
-      return (await import("./curate-OHIJFBYF.js")).run(args, vaultDir);
+      return (await import("./curate-4CKEMOPV.js")).run(args, vaultDir);
     case "verify":
-      return (await import("./verify-IIAHBAAU.js")).run(args, vaultDir);
+      return (await import("./verify-X272WGBD.js")).run(args, vaultDir);
     case "stats":
-      return (await import("./stats-43OESUEB.js")).run(args, vaultDir);
+      return (await import("./stats-QBLIEFWL.js")).run(args, vaultDir);
     case "search":
-      return (await import("./search-QXJQUB35.js")).run(args, vaultDir);
+      return (await import("./search-BQLBW5CS.js")).run(args, vaultDir);
     case "vectors":
-      return (await import("./search-QXJQUB35.js")).runVectors(args, vaultDir);
+      return (await import("./search-BQLBW5CS.js")).runVectors(args, vaultDir);
     case "session":
       return (await import("./session-F326AWCH.js")).run(args, vaultDir);
     case "setup-llm":
-      return (await import("./setup-llm-EAOIUSPJ.js")).run(args, vaultDir);
+      return (await import("./setup-llm-QBSTQO7N.js")).run(args, vaultDir);
     case "setup-digest":
-      return (await import("./setup-digest-QNCM3PNQ.js")).run(args, vaultDir);
+      return (await import("./setup-digest-X735EZSD.js")).run(args, vaultDir);
     case "digest":
-      return (await import("./digest-I2XYCK2M.js")).run(args, vaultDir);
+      return (await import("./digest-ZLARHLLY.js")).run(args, vaultDir);
     case "restart":
-      return (await import("./restart-WSA4JSE3.js")).run(args, vaultDir);
+      return (await import("./restart-UIP7US4U.js")).run(args, vaultDir);
     case "rebuild":
-      return (await import("./rebuild-NAH4EW5B.js")).run(args, vaultDir);
+      return (await import("./rebuild-QWVVCBCZ.js")).run(args, vaultDir);
     case "reprocess":
-      return (await import("./reprocess-6FOP37XS.js")).run(args, vaultDir);
+      return (await import("./reprocess-YG3WLUI2.js")).run(args, vaultDir);
     case "logs":
-      return (await import("./logs-IENORIYR.js")).run(args, vaultDir);
+      return (await import("./logs-6CWVP574.js")).run(args, vaultDir);
     default:
       console.error(`Unknown command: ${cmd}`);
       process.stdout.write(USAGE);
@@ -94,4 +94,4 @@ main().catch((err) => {
   console.error(`myco: ${err.message}`);
   process.exit(1);
 });
-//# sourceMappingURL=cli-EGWAINIE.js.map
+//# sourceMappingURL=cli-OJYHLO4Y.js.map

package/dist/{client-FDKJ4BY7.js → client-SS3C5MF6.js}

@@ -1,12 +1,12 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   DaemonClient
-} from "./chunk-CPVXNRGW.js";
-import "./chunk-CK24O5YQ.js";
-import "./chunk-RNWALAFP.js";
-import "./chunk-WBLTISAK.js";
+} from "./chunk-4B5RO2YV.js";
+import "./chunk-XH34FX4C.js";
+import "./chunk-F7GAYVWF.js";
+import "./chunk-DYDBF5W6.js";
 import "./chunk-PZUWP5VK.js";
 export {
   DaemonClient
 };
-//# sourceMappingURL=client-FDKJ4BY7.js.map
+//# sourceMappingURL=client-SS3C5MF6.js.map

package/dist/{config-HDUFDOQN.js → config-IBS6KOLQ.js}

@@ -1,11 +1,11 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   loadConfig
-} from "./chunk-YG6MLLGL.js";
+} from "./chunk-HYVT345Y.js";
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-JSK7L46L.js";
+} from "./chunk-ERG2IEWX.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -98,4 +98,4 @@ function parseValue(raw) {
 export {
   run
 };
-//# sourceMappingURL=config-HDUFDOQN.js.map
+//# sourceMappingURL=config-IBS6KOLQ.js.map

package/dist/{curate-OHIJFBYF.js → curate-4CKEMOPV.js}

@@ -1,28 +1,27 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   runCuration
-} from "./chunk-PQWQC3RF.js";
+} from "./chunk-TK7A4RX7.js";
 import {
   VectorIndex
 } from "./chunk-4RMSHZE4.js";
-import "./chunk-ALBVNGCF.js";
+import "./chunk-V6BJVYNH.js";
 import "./chunk-RGVBGTD6.js";
 import {
   createEmbeddingProvider,
   createLlmProvider
-} from "./chunk-DBMHUMG3.js";
-import "./chunk-RY76WEN3.js";
+} from "./chunk-54WVLTKD.js";
+import "./chunk-GENQ5QGP.js";
 import "./chunk-6FQISQNA.js";
 import {
   MycoIndex
 } from "./chunk-TWSTAVLO.js";
-import "./chunk-25FY74AP.js";
+import "./chunk-4DYD4HHG.js";
 import {
   loadConfig
-} from "./chunk-YG6MLLGL.js";
-import "./chunk-JSK7L46L.js";
-import "./chunk-RNWALAFP.js";
-import "./chunk-WBLTISAK.js";
+} from "./chunk-HYVT345Y.js";
+import "./chunk-ERG2IEWX.js";
+import "./chunk-DYDBF5W6.js";
 import "./chunk-PZUWP5VK.js";
 
 // src/cli/curate.ts
@@ -76,4 +75,4 @@ Curation complete:`);
 export {
   run
 };
-//# sourceMappingURL=curate-OHIJFBYF.js.map
+//# sourceMappingURL=curate-4CKEMOPV.js.map

package/dist/{curate-OHIJFBYF.js.map → curate-4CKEMOPV.js.map}

@@ -1 +1 @@
-{"version":3,"sources":["../src/cli/curate.ts"],"sourcesContent":["/**\n * myco curate — scan the vault for stale spores and supersede them.\n *\n * Usage:\n *   myco curate              Scan and supersede stale spores\n *   myco curate --dry-run    Show what would be superseded without writing\n *\n * Algorithm:\n *   1. Load all active spores from the index\n *   2. Group by observation_type\n *   3. Within each group, embed spores and cluster by cosine similarity\n *   4. For each cluster with 2+ members, ask the LLM which are outdated\n *   5. Mark superseded: update frontmatter, append notice, re-index, remove vector\n */\nimport path from 'node:path';\nimport { loadConfig } from '../config/loader.js';\nimport { MycoIndex } from '../index/sqlite.js';\nimport { VectorIndex } from '../index/vectors.js';\nimport { createLlmProvider, createEmbeddingProvider } from '../intelligence/llm.js';\nimport { runCuration } from '../services/vault-ops.js';\n\nexport async function run(args: string[], vaultDir: string): Promise<void> {\n  const isDryRun = args.includes('--dry-run');\n\n  const config = loadConfig(vaultDir);\n  const index = new MycoIndex(path.join(vaultDir, 'index.db'));\n\n  const llmProvider = createLlmProvider(config.intelligence.llm);\n  const embeddingProvider = createEmbeddingProvider(config.intelligence.embedding);\n\n  let vectorIndex: VectorIndex | null = null;\n  try {\n    const testEmbed = await embeddingProvider.embed('test');\n    vectorIndex = new VectorIndex(path.join(vaultDir, 'vectors.db'), testEmbed.dimensions);\n  } catch (e) {\n    console.error(`Vector index unavailable: ${(e as Error).message}`);\n    console.error('Curate requires a working embedding provider.');\n    index.close();\n    process.exit(1);\n  }\n\n  try {\n    if (isDryRun) {\n      console.log('Dry run — no changes will be written.\\n');\n    }\n\n    const result = await runCuration(\n      {\n        vaultDir,\n        config,\n        index,\n        vectorIndex,\n        llmProvider,\n        embeddingProvider,\n        log: (_level, message) => console.log(`  ${message}`),\n      },\n      isDryRun,\n    );\n\n    console.log(`\\nCuration complete:`);\n    console.log(`  Scanned: ${result.scanned} active spores`);\n    console.log(`  Clusters evaluated: ${result.clustersEvaluated}`);\n    if (isDryRun) {\n      console.log(`  Would supersede: ${result.superseded}`);\n    } else {\n      console.log(`  Superseded: ${result.superseded}`);\n    }\n  } finally {\n    index.close();\n    vectorIndex?.close();\n  }\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAcA,OAAO,UAAU;AAOjB,eAAsB,IAAI,MAAgB,UAAiC;AACzE,QAAM,WAAW,KAAK,SAAS,WAAW;AAE1C,QAAM,SAAS,WAAW,QAAQ;AAClC,QAAM,QAAQ,IAAI,UAAU,KAAK,KAAK,UAAU,UAAU,CAAC;AAE3D,QAAM,cAAc,kBAAkB,OAAO,aAAa,GAAG;AAC7D,QAAM,oBAAoB,wBAAwB,OAAO,aAAa,SAAS;AAE/E,MAAI,cAAkC;AACtC,MAAI;AACF,UAAM,YAAY,MAAM,kBAAkB,MAAM,MAAM;AACtD,kBAAc,IAAI,YAAY,KAAK,KAAK,UAAU,YAAY,GAAG,UAAU,UAAU;AAAA,EACvF,SAAS,GAAG;AACV,YAAQ,MAAM,6BAA8B,EAAY,OAAO,EAAE;AACjE,YAAQ,MAAM,+CAA+C;AAC7D,UAAM,MAAM;AACZ,YAAQ,KAAK,CAAC;AAAA,EAChB;AAEA,MAAI;AACF,QAAI,UAAU;AACZ,cAAQ,IAAI,8CAAyC;AAAA,IACvD;AAEA,UAAM,SAAS,MAAM;AAAA,MACnB;AAAA,QACE;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA,KAAK,CAAC,QAAQ,YAAY,QAAQ,IAAI,KAAK,OAAO,EAAE;AAAA,MACtD;AAAA,MACA;AAAA,IACF;AAEA,YAAQ,IAAI;AAAA,mBAAsB;AAClC,YAAQ,IAAI,cAAc,OAAO,OAAO,gBAAgB;AACxD,YAAQ,IAAI,yBAAyB,OAAO,iBAAiB,EAAE;AAC/D,QAAI,UAAU;AACZ,cAAQ,IAAI,sBAAsB,OAAO,UAAU,EAAE;AAAA,IACvD,OAAO;AACL,cAAQ,IAAI,iBAAiB,OAAO,UAAU,EAAE;AAAA,IAClD;AAAA,EACF,UAAE;AACA,UAAM,MAAM;AACZ,iBAAa,MAAM;AAAA,EACrB;AACF;","names":[]}
+{"version":3,"sources":["../src/cli/curate.ts"],"sourcesContent":["/**\n * myco curate — scan the vault for stale spores and supersede them.\n *\n * Usage:\n *   myco curate              Scan and supersede stale spores\n *   myco curate --dry-run    Show what would be superseded without writing\n *\n * Algorithm:\n *   1. Load all active spores from the index\n *   2. Group by observation_type\n *   3. Within each group, embed spores and cluster by cosine similarity\n *   4. For each cluster with 2+ members, ask the LLM which are outdated\n *   5. Mark superseded: update frontmatter, append notice, re-index, remove vector\n */\nimport path from 'node:path';\nimport { loadConfig } from '../config/loader.js';\nimport { MycoIndex } from '../index/sqlite.js';\nimport { VectorIndex } from '../index/vectors.js';\nimport { createLlmProvider, createEmbeddingProvider } from '../intelligence/llm.js';\nimport { runCuration } from '../services/vault-ops.js';\n\nexport async function run(args: string[], vaultDir: string): Promise<void> {\n  const isDryRun = args.includes('--dry-run');\n\n  const config = loadConfig(vaultDir);\n  const index = new MycoIndex(path.join(vaultDir, 'index.db'));\n\n  const llmProvider = createLlmProvider(config.intelligence.llm);\n  const embeddingProvider = createEmbeddingProvider(config.intelligence.embedding);\n\n  let vectorIndex: VectorIndex | null = null;\n  try {\n    const testEmbed = await embeddingProvider.embed('test');\n    vectorIndex = new VectorIndex(path.join(vaultDir, 'vectors.db'), testEmbed.dimensions);\n  } catch (e) {\n    console.error(`Vector index unavailable: ${(e as Error).message}`);\n    console.error('Curate requires a working embedding provider.');\n    index.close();\n    process.exit(1);\n  }\n\n  try {\n    if (isDryRun) {\n      console.log('Dry run — no changes will be written.\\n');\n    }\n\n    const result = await runCuration(\n      {\n        vaultDir,\n        config,\n        index,\n        vectorIndex,\n        llmProvider,\n        embeddingProvider,\n        log: (_level, message) => console.log(`  ${message}`),\n      },\n      isDryRun,\n    );\n\n    console.log(`\\nCuration complete:`);\n    console.log(`  Scanned: ${result.scanned} active spores`);\n    console.log(`  Clusters evaluated: ${result.clustersEvaluated}`);\n    if (isDryRun) {\n      console.log(`  Would supersede: ${result.superseded}`);\n    } else {\n      console.log(`  Superseded: ${result.superseded}`);\n    }\n  } finally {\n    index.close();\n    vectorIndex?.close();\n  }\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;AAcA,OAAO,UAAU;AAOjB,eAAsB,IAAI,MAAgB,UAAiC;AACzE,QAAM,WAAW,KAAK,SAAS,WAAW;AAE1C,QAAM,SAAS,WAAW,QAAQ;AAClC,QAAM,QAAQ,IAAI,UAAU,KAAK,KAAK,UAAU,UAAU,CAAC;AAE3D,QAAM,cAAc,kBAAkB,OAAO,aAAa,GAAG;AAC7D,QAAM,oBAAoB,wBAAwB,OAAO,aAAa,SAAS;AAE/E,MAAI,cAAkC;AACtC,MAAI;AACF,UAAM,YAAY,MAAM,kBAAkB,MAAM,MAAM;AACtD,kBAAc,IAAI,YAAY,KAAK,KAAK,UAAU,YAAY,GAAG,UAAU,UAAU;AAAA,EACvF,SAAS,GAAG;AACV,YAAQ,MAAM,6BAA8B,EAAY,OAAO,EAAE;AACjE,YAAQ,MAAM,+CAA+C;AAC7D,UAAM,MAAM;AACZ,YAAQ,KAAK,CAAC;AAAA,EAChB;AAEA,MAAI;AACF,QAAI,UAAU;AACZ,cAAQ,IAAI,8CAAyC;AAAA,IACvD;AAEA,UAAM,SAAS,MAAM;AAAA,MACnB;AAAA,QACE;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA;AAAA,QACA,KAAK,CAAC,QAAQ,YAAY,QAAQ,IAAI,KAAK,OAAO,EAAE;AAAA,MACtD;AAAA,MACA;AAAA,IACF;AAEA,YAAQ,IAAI;AAAA,mBAAsB;AAClC,YAAQ,IAAI,cAAc,OAAO,OAAO,gBAAgB;AACxD,YAAQ,IAAI,yBAAyB,OAAO,iBAAiB,EAAE;AAC/D,QAAI,UAAU;AACZ,cAAQ,IAAI,sBAAsB,OAAO,UAAU,EAAE;AAAA,IACvD,OAAO;AACL,cAAQ,IAAI,iBAAiB,OAAO,UAAU,EAAE;AAAA,IAClD;AAAA,EACF,UAAE;AACA,UAAM,MAAM;AACZ,iBAAa,MAAM;AAAA,EACrB;AACF;","names":[]}

package/dist/{detect-providers-4U3ZPW5G.js → detect-providers-LFIVJYQO.js}

@@ -2,10 +2,10 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-25FY74AP.js";
+} from "./chunk-4DYD4HHG.js";
 import {
   PROVIDER_DETECT_TIMEOUT_MS
-} from "./chunk-WBLTISAK.js";
+} from "./chunk-DYDBF5W6.js";
 import "./chunk-PZUWP5VK.js";
 
 // src/cli/detect-providers.ts
@@ -32,4 +32,4 @@ async function run(_args) {
 export {
   run
 };
-//# sourceMappingURL=detect-providers-4U3ZPW5G.js.map
+//# sourceMappingURL=detect-providers-LFIVJYQO.js.map

package/dist/{digest-I2XYCK2M.js → digest-ZLARHLLY.js}

@@ -1,28 +1,28 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   runDigest
-} from "./chunk-PQWQC3RF.js";
-import "./chunk-ALBVNGCF.js";
+} from "./chunk-TK7A4RX7.js";
+import "./chunk-V6BJVYNH.js";
 import "./chunk-RGVBGTD6.js";
 import {
   createLlmProvider
-} from "./chunk-DBMHUMG3.js";
-import "./chunk-RY76WEN3.js";
+} from "./chunk-54WVLTKD.js";
+import "./chunk-GENQ5QGP.js";
 import "./chunk-6FQISQNA.js";
 import {
   MycoIndex
 } from "./chunk-TWSTAVLO.js";
-import "./chunk-4WL5X7VS.js";
+import "./chunk-YRIIBPJD.js";
 import {
   parseIntFlag
 } from "./chunk-SAKJMNSR.js";
-import "./chunk-25FY74AP.js";
+import "./chunk-4DYD4HHG.js";
 import {
   loadConfig
-} from "./chunk-YG6MLLGL.js";
-import "./chunk-JSK7L46L.js";
-import "./chunk-RNWALAFP.js";
-import "./chunk-WBLTISAK.js";
+} from "./chunk-HYVT345Y.js";
+import "./chunk-ERG2IEWX.js";
+import "./chunk-F7GAYVWF.js";
+import "./chunk-DYDBF5W6.js";
 import "./chunk-PZUWP5VK.js";
 
 // src/cli/digest.ts
@@ -82,4 +82,4 @@ Digest cycle complete:`);
 export {
   run
 };
-//# sourceMappingURL=digest-I2XYCK2M.js.map
+//# sourceMappingURL=digest-ZLARHLLY.js.map

package/dist/{init-ZO2XQT6U.js → init-3LVKVQ4L.js}

@@ -7,27 +7,27 @@ import {
 } from "./chunk-TWSTAVLO.js";
 import {
   run
-} from "./chunk-IWBWZQK6.js";
+} from "./chunk-MDLSAFPP.js";
 import {
   run as run2
-} from "./chunk-XNAM6Z4O.js";
+} from "./chunk-P723N2LP.js";
 import {
   VAULT_GITIGNORE,
   configureVaultEnv
-} from "./chunk-4WL5X7VS.js";
+} from "./chunk-YRIIBPJD.js";
 import {
   parseStringFlag
 } from "./chunk-SAKJMNSR.js";
-import "./chunk-25FY74AP.js";
+import "./chunk-4DYD4HHG.js";
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-JSK7L46L.js";
+} from "./chunk-ERG2IEWX.js";
 import {
   resolveVaultDir
 } from "./chunk-N33KUCFP.js";
-import "./chunk-RNWALAFP.js";
-import "./chunk-WBLTISAK.js";
+import "./chunk-F7GAYVWF.js";
+import "./chunk-DYDBF5W6.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -106,4 +106,4 @@ async function run3(args) {
 export {
   run3 as run
 };
-//# sourceMappingURL=init-ZO2XQT6U.js.map
+//# sourceMappingURL=init-3LVKVQ4L.js.map

package/dist/{logs-IENORIYR.js → logs-6CWVP574.js}

@@ -3,10 +3,10 @@ import {
   DEFAULT_LOG_TAIL,
   matchesFilter,
   queryLogs
-} from "./chunk-H7PRCVGQ.js";
+} from "./chunk-F7PGDD2X.js";
 import {
   LEVEL_ORDER
-} from "./chunk-QLUE3BUL.js";
+} from "./chunk-O6TBHGVO.js";
 import {
   formatLogLine,
   parseIntFlag,
@@ -81,4 +81,4 @@ function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=logs-IENORIYR.js.map
+//# sourceMappingURL=logs-6CWVP574.js.map