@goondocks/myco 0.4.0 → 0.4.2

package/dist/{chunk-XHWIIU5D.js → chunk-GFBG73P4.js}

@@ -2,7 +2,7 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-P7RNAYU7.js";
+} from "./chunk-67R6EMYD.js";
 import {
   AgentRegistry
 } from "./chunk-BNIYWCST.js";
@@ -116,4 +116,4 @@ export {
   VAULT_GITIGNORE,
   configureVaultEnv
 };
-//# sourceMappingURL=chunk-XHWIIU5D.js.map
+//# sourceMappingURL=chunk-GFBG73P4.js.map

package/dist/{chunk-TZDDXRHG.js → chunk-I7PNZEBO.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -422,4 +422,4 @@ export {
   formatSporeBody,
   VaultWriter
 };
-//# sourceMappingURL=chunk-TZDDXRHG.js.map
+//# sourceMappingURL=chunk-I7PNZEBO.js.map

package/dist/{chunk-IVS5MYBL.js → chunk-IYFKPSRP.js}

@@ -2,7 +2,7 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-P7RNAYU7.js";
+} from "./chunk-67R6EMYD.js";
 import {
   LLM_REQUEST_TIMEOUT_MS
 } from "./chunk-JBD5KP5G.js";
@@ -4911,4 +4911,4 @@ export {
   createLlmProvider,
   createEmbeddingProvider
 };
-//# sourceMappingURL=chunk-IVS5MYBL.js.map
+//# sourceMappingURL=chunk-IYFKPSRP.js.map

package/dist/{chunk-NUA7UTIY.js → chunk-MIU3DKLN.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -34,4 +34,4 @@ export {
   sessionFm,
   sporeFm
 };
-//# sourceMappingURL=chunk-NUA7UTIY.js.map
+//# sourceMappingURL=chunk-MIU3DKLN.js.map

package/dist/{chunk-VYV5IFD6.js → chunk-T7OC6GH5.js}

@@ -5,7 +5,7 @@ import {
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -96,4 +96,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=chunk-VYV5IFD6.js.map
+//# sourceMappingURL=chunk-T7OC6GH5.js.map

package/dist/chunk-TBRZAJ7W.js

@@ -0,0 +1,135 @@
+import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
+import {
+  MycoConfigSchema,
+  require_dist
+} from "./chunk-6UJWI4IW.js";
+import {
+  __toESM
+} from "./chunk-PZUWP5VK.js";
+
+// src/config/loader.ts
+var import_yaml = __toESM(require_dist(), 1);
+import fs2 from "fs";
+import path2 from "path";
+
+// src/config/migrations.ts
+import fs from "fs";
+import path from "path";
+var MEMORY_TYPE_PATTERN = /type:\s*["']?memory["']?/g;
+var MIGRATIONS = [
+  {
+    version: 1,
+    name: "rename-memories-to-spores",
+    migrate: (doc, vaultDir) => {
+      const context = doc.context;
+      const layers = context?.layers;
+      if (layers && "memories" in layers && !("spores" in layers)) {
+        layers.spores = layers.memories;
+        delete layers.memories;
+      }
+      const memoriesDir = path.join(vaultDir, "memories");
+      const sporesDir = path.join(vaultDir, "spores");
+      if (!fs.existsSync(memoriesDir)) return;
+      if (fs.existsSync(sporesDir)) {
+        const moveRemaining = (srcDir, destDir) => {
+          for (const entry of fs.readdirSync(srcDir, { withFileTypes: true })) {
+            const srcPath = path.join(srcDir, entry.name);
+            const destPath = path.join(destDir, entry.name);
+            if (entry.isDirectory()) {
+              if (!fs.existsSync(destPath)) fs.mkdirSync(destPath, { recursive: true });
+              moveRemaining(srcPath, destPath);
+            } else if (!fs.existsSync(destPath)) {
+              fs.renameSync(srcPath, destPath);
+            }
+          }
+        };
+        moveRemaining(memoriesDir, sporesDir);
+        fs.rmSync(memoriesDir, { recursive: true, force: true });
+      } else {
+        fs.renameSync(memoriesDir, sporesDir);
+      }
+      const walkUpdate = (dir) => {
+        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {
+          const fullPath = path.join(dir, entry.name);
+          if (entry.isDirectory()) {
+            walkUpdate(fullPath);
+            continue;
+          }
+          if (!entry.name.endsWith(".md")) continue;
+          const content = fs.readFileSync(fullPath, "utf-8");
+          MEMORY_TYPE_PATTERN.lastIndex = 0;
+          if (MEMORY_TYPE_PATTERN.test(content)) {
+            MEMORY_TYPE_PATTERN.lastIndex = 0;
+            fs.writeFileSync(fullPath, content.replace(MEMORY_TYPE_PATTERN, "type: spore"));
+          }
+        }
+      };
+      walkUpdate(sporesDir);
+      const walkLinks = (dir) => {
+        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {
+          const fullPath = path.join(dir, entry.name);
+          if (entry.isDirectory()) {
+            walkLinks(fullPath);
+            continue;
+          }
+          if (!entry.name.endsWith(".md")) continue;
+          const content = fs.readFileSync(fullPath, "utf-8");
+          if (content.includes("memories/")) {
+            fs.writeFileSync(fullPath, content.replace(/memories\//g, "spores/"));
+          }
+        }
+      };
+      walkLinks(vaultDir);
+    }
+  }
+];
+var CURRENT_MIGRATION_VERSION = MIGRATIONS[MIGRATIONS.length - 1]?.version ?? 0;
+function runMigrations(doc, vaultDir, log) {
+  const currentVersion = doc.config_version ?? 0;
+  let ran = false;
+  for (const migration of MIGRATIONS) {
+    if (migration.version <= currentVersion) continue;
+    log?.(`Running migration ${migration.version}: ${migration.name}`);
+    migration.migrate(doc, vaultDir);
+    doc.config_version = migration.version;
+    ran = true;
+  }
+  return ran;
+}
+
+// src/config/loader.ts
+var CONFIG_FILENAME = "myco.yaml";
+function loadConfig(vaultDir) {
+  const configPath = path2.join(vaultDir, CONFIG_FILENAME);
+  if (!fs2.existsSync(configPath)) {
+    throw new Error(`myco.yaml not found in ${vaultDir}`);
+  }
+  const raw = fs2.readFileSync(configPath, "utf-8");
+  const parsed = import_yaml.default.parse(raw);
+  if (parsed.version === 1 || parsed.intelligence?.backend) {
+    throw new Error(
+      "Myco config uses v1 format. Run /myco:setup-llm to reconfigure for v2."
+    );
+  }
+  const intel = parsed.intelligence;
+  const llm = intel?.llm;
+  if (llm?.provider === "haiku") {
+    llm.provider = "anthropic";
+  }
+  const migrationsRan = runMigrations(parsed, vaultDir, (msg) => {
+    process.stderr.write(`[myco migration] ${msg}
+`);
+  });
+  const config = MycoConfigSchema.parse(parsed);
+  const needsWrite = migrationsRan || (parsed.config_version ?? 0) < CURRENT_MIGRATION_VERSION || !("digest" in parsed);
+  if (needsWrite) {
+    const fullConfig = JSON.parse(JSON.stringify(config));
+    fs2.writeFileSync(configPath, import_yaml.default.stringify(fullConfig), "utf-8");
+  }
+  return config;
+}
+
+export {
+  loadConfig
+};
+//# sourceMappingURL=chunk-TBRZAJ7W.js.map

package/dist/chunk-TBRZAJ7W.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/config/loader.ts","../src/config/migrations.ts"],"sourcesContent":["import fs from 'node:fs';\nimport path from 'node:path';\nimport YAML from 'yaml';\nimport { MycoConfigSchema, type MycoConfig } from './schema.js';\nimport { runMigrations, CURRENT_MIGRATION_VERSION } from './migrations.js';\n\nconst CONFIG_FILENAME = 'myco.yaml';\n\nexport function loadConfig(vaultDir: string): MycoConfig {\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n\n  if (!fs.existsSync(configPath)) {\n    throw new Error(`myco.yaml not found in ${vaultDir}`);\n  }\n\n  const raw = fs.readFileSync(configPath, 'utf-8');\n  const parsed = YAML.parse(raw) as Record<string, unknown>;\n\n  // Detect v1 config and guide migration\n  if (parsed.version === 1 || (parsed.intelligence as Record<string, unknown>)?.backend) {\n    throw new Error(\n      'Myco config uses v1 format. Run /myco:setup-llm to reconfigure for v2.',\n    );\n  }\n\n  // Auto-map legacy 'haiku' provider name to 'anthropic'\n  const intel = parsed.intelligence as Record<string, unknown> | undefined;\n  const llm = intel?.llm as Record<string, unknown> | undefined;\n  if (llm?.provider === 'haiku') {\n    llm.provider = 'anthropic';\n  }\n\n  // Run numbered migrations\n  const migrationsRan = runMigrations(parsed, vaultDir, (msg) => {\n    // Log to stderr since this runs during config loading (before logger is available)\n    process.stderr.write(`[myco migration] ${msg}\\n`);\n  });\n\n  // Parse with Zod to fill in defaults for new config sections\n  const config = MycoConfigSchema.parse(parsed);\n\n  // Write back if migrations ran or new defaults were added\n  const needsWrite = migrationsRan\n    || (parsed.config_version as number ?? 0) < CURRENT_MIGRATION_VERSION\n    || !('digest' in parsed);\n\n  if (needsWrite) {\n    const fullConfig = JSON.parse(JSON.stringify(config)) as Record<string, unknown>;\n    fs.writeFileSync(configPath, YAML.stringify(fullConfig), 'utf-8');\n  }\n\n  return config;\n}\n\nexport function saveConfig(vaultDir: string, config: MycoConfig): void {\n  // Validate before writing — OAK lesson: validate on write, not just read\n  const validated = MycoConfigSchema.parse(config);\n\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n  fs.mkdirSync(vaultDir, { recursive: true });\n  fs.writeFileSync(configPath, YAML.stringify(validated), 'utf-8');\n}\n","/**\n * Config and vault migrations — run once per version, tracked by config_version.\n *\n * Each migration has a version number, a name, and a function that receives\n * the raw parsed YAML doc and the vault directory. Migrations run in order\n * and are skipped if config_version is already past them.\n *\n * To add a new migration:\n * 1. Add an entry to MIGRATIONS with the next version number\n * 2. Write the migrate function — it receives the mutable doc and vaultDir\n * 3. The framework handles version tracking and writing the config back\n */\n\nimport fs from 'node:fs';\nimport path from 'node:path';\n\nexport interface Migration {\n  version: number;\n  name: string;\n  migrate: (doc: Record<string, unknown>, vaultDir: string) => void;\n}\n\n/** Regex matching both quoted and unquoted YAML: type: memory, type: \"memory\", type: 'memory' */\nconst MEMORY_TYPE_PATTERN = /type:\\s*[\"']?memory[\"']?/g;\n\nexport const MIGRATIONS: Migration[] = [\n  {\n    version: 1,\n    name: 'rename-memories-to-spores',\n    migrate: (doc, vaultDir) => {\n      // Config: rename context.layers.memories → context.layers.spores\n      const context = doc.context as Record<string, unknown> | undefined;\n      const layers = context?.layers as Record<string, unknown> | undefined;\n      if (layers && 'memories' in layers && !('spores' in layers)) {\n        layers.spores = layers.memories;\n        delete layers.memories;\n      }\n\n      // Vault: rename memories/ directory → spores/\n      const memoriesDir = path.join(vaultDir, 'memories');\n      const sporesDir = path.join(vaultDir, 'spores');\n\n      if (!fs.existsSync(memoriesDir)) return;\n\n      if (fs.existsSync(sporesDir)) {\n        // Both exist (interrupted migration) — merge remaining files\n        const moveRemaining = (srcDir: string, destDir: string): void => {\n          for (const entry of fs.readdirSync(srcDir, { withFileTypes: true })) {\n            const srcPath = path.join(srcDir, entry.name);\n            const destPath = path.join(destDir, entry.name);\n            if (entry.isDirectory()) {\n              if (!fs.existsSync(destPath)) fs.mkdirSync(destPath, { recursive: true });\n              moveRemaining(srcPath, destPath);\n            } else if (!fs.existsSync(destPath)) {\n              fs.renameSync(srcPath, destPath);\n            }\n          }\n        };\n        moveRemaining(memoriesDir, sporesDir);\n        fs.rmSync(memoriesDir, { recursive: true, force: true });\n      } else {\n        fs.renameSync(memoriesDir, sporesDir);\n      }\n\n      // Update frontmatter type: memory → type: spore (handles quoted and unquoted)\n      const walkUpdate = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkUpdate(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          MEMORY_TYPE_PATTERN.lastIndex = 0;\n          if (MEMORY_TYPE_PATTERN.test(content)) {\n            MEMORY_TYPE_PATTERN.lastIndex = 0;\n            fs.writeFileSync(fullPath, content.replace(MEMORY_TYPE_PATTERN, 'type: spore'));\n          }\n        }\n      };\n      walkUpdate(sporesDir);\n\n      // Update wikilinks in ALL vault files: [[memories/...]] → [[spores/...]]\n      const walkLinks = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkLinks(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          if (content.includes('memories/')) {\n            fs.writeFileSync(fullPath, content.replace(/memories\\//g, 'spores/'));\n          }\n        }\n      };\n      walkLinks(vaultDir);\n    },\n  },\n];\n\n/** Current migration version — the highest version in MIGRATIONS. */\nexport const CURRENT_MIGRATION_VERSION = MIGRATIONS[MIGRATIONS.length - 1]?.version ?? 0;\n\n/**\n * Run all pending migrations on the raw config doc.\n * Returns true if any migrations ran (caller should reindex).\n */\nexport function runMigrations(\n  doc: Record<string, unknown>,\n  vaultDir: string,\n  log?: (message: string) => void,\n): boolean {\n  const currentVersion = (doc.config_version as number) ?? 0;\n  let ran = false;\n\n  for (const migration of MIGRATIONS) {\n    if (migration.version <= currentVersion) continue;\n\n    log?.(`Running migration ${migration.version}: ${migration.name}`);\n    migration.migrate(doc, vaultDir);\n    doc.config_version = migration.version;\n    ran = true;\n  }\n\n  return ran;\n}\n"],"mappings":";;;;;;;;;;AAEA,kBAAiB;AAFjB,OAAOA,SAAQ;AACf,OAAOC,WAAU;;;ACYjB,OAAO,QAAQ;AACf,OAAO,UAAU;AASjB,IAAM,sBAAsB;AAErB,IAAM,aAA0B;AAAA,EACrC;AAAA,IACE,SAAS;AAAA,IACT,MAAM;AAAA,IACN,SAAS,CAAC,KAAK,aAAa;AAE1B,YAAM,UAAU,IAAI;AACpB,YAAM,SAAS,SAAS;AACxB,UAAI,UAAU,cAAc,UAAU,EAAE,YAAY,SAAS;AAC3D,eAAO,SAAS,OAAO;AACvB,eAAO,OAAO;AAAA,MAChB;AAGA,YAAM,cAAc,KAAK,KAAK,UAAU,UAAU;AAClD,YAAM,YAAY,KAAK,KAAK,UAAU,QAAQ;AAE9C,UAAI,CAAC,GAAG,WAAW,WAAW,EAAG;AAEjC,UAAI,GAAG,WAAW,SAAS,GAAG;AAE5B,cAAM,gBAAgB,CAAC,QAAgB,YAA0B;AAC/D,qBAAW,SAAS,GAAG,YAAY,QAAQ,EAAE,eAAe,KAAK,CAAC,GAAG;AACnE,kBAAM,UAAU,KAAK,KAAK,QAAQ,MAAM,IAAI;AAC5C,kBAAM,WAAW,KAAK,KAAK,SAAS,MAAM,IAAI;AAC9C,gBAAI,MAAM,YAAY,GAAG;AACvB,kBAAI,CAAC,GAAG,WAAW,QAAQ,EAAG,IAAG,UAAU,UAAU,EAAE,WAAW,KAAK,CAAC;AACxE,4BAAc,SAAS,QAAQ;AAAA,YACjC,WAAW,CAAC,GAAG,WAAW,QAAQ,GAAG;AACnC,iBAAG,WAAW,SAAS,QAAQ;AAAA,YACjC;AAAA,UACF;AAAA,QACF;AACA,sBAAc,aAAa,SAAS;AACpC,WAAG,OAAO,aAAa,EAAE,WAAW,MAAM,OAAO,KAAK,CAAC;AAAA,MACzD,OAAO;AACL,WAAG,WAAW,aAAa,SAAS;AAAA,MACtC;AAGA,YAAM,aAAa,CAAC,QAAsB;AACxC,mBAAW,SAAS,GAAG,YAAY,KAAK,EAAE,eAAe,KAAK,CAAC,GAAG;AAChE,gBAAM,WAAW,KAAK,KAAK,KAAK,MAAM,IAAI;AAC1C,cAAI,MAAM,YAAY,GAAG;AAAE,uBAAW,QAAQ;AAAG;AAAA,UAAU;AAC3D,cAAI,CAAC,MAAM,KAAK,SAAS,KAAK,EAAG;AACjC,gBAAM,UAAU,GAAG,aAAa,UAAU,OAAO;AACjD,8BAAoB,YAAY;AAChC,cAAI,oBAAoB,KAAK,OAAO,GAAG;AACrC,gCAAoB,YAAY;AAChC,eAAG,cAAc,UAAU,QAAQ,QAAQ,qBAAqB,aAAa,CAAC;AAAA,UAChF;AAAA,QACF;AAAA,MACF;AACA,iBAAW,SAAS;AAGpB,YAAM,YAAY,CAAC,QAAsB;AACvC,mBAAW,SAAS,GAAG,YAAY,KAAK,EAAE,eAAe,KAAK,CAAC,GAAG;AAChE,gBAAM,WAAW,KAAK,KAAK,KAAK,MAAM,IAAI;AAC1C,cAAI,MAAM,YAAY,GAAG;AAAE,sBAAU,QAAQ;AAAG;AAAA,UAAU;AAC1D,cAAI,CAAC,MAAM,KAAK,SAAS,KAAK,EAAG;AACjC,gBAAM,UAAU,GAAG,aAAa,UAAU,OAAO;AACjD,cAAI,QAAQ,SAAS,WAAW,GAAG;AACjC,eAAG,cAAc,UAAU,QAAQ,QAAQ,eAAe,SAAS,CAAC;AAAA,UACtE;AAAA,QACF;AAAA,MACF;AACA,gBAAU,QAAQ;AAAA,IACpB;AAAA,EACF;AACF;AAGO,IAAM,4BAA4B,WAAW,WAAW,SAAS,CAAC,GAAG,WAAW;AAMhF,SAAS,cACd,KACA,UACA,KACS;AACT,QAAM,iBAAkB,IAAI,kBAA6B;AACzD,MAAI,MAAM;AAEV,aAAW,aAAa,YAAY;AAClC,QAAI,UAAU,WAAW,eAAgB;AAEzC,UAAM,qBAAqB,UAAU,OAAO,KAAK,UAAU,IAAI,EAAE;AACjE,cAAU,QAAQ,KAAK,QAAQ;AAC/B,QAAI,iBAAiB,UAAU;AAC/B,UAAM;AAAA,EACR;AAEA,SAAO;AACT;;;ADpHA,IAAM,kBAAkB;AAEjB,SAAS,WAAW,UAA8B;AACvD,QAAM,aAAaC,MAAK,KAAK,UAAU,eAAe;AAEtD,MAAI,CAACC,IAAG,WAAW,UAAU,GAAG;AAC9B,UAAM,IAAI,MAAM,0BAA0B,QAAQ,EAAE;AAAA,EACtD;AAEA,QAAM,MAAMA,IAAG,aAAa,YAAY,OAAO;AAC/C,QAAM,SAAS,YAAAC,QAAK,MAAM,GAAG;AAG7B,MAAI,OAAO,YAAY,KAAM,OAAO,cAA0C,SAAS;AACrF,UAAM,IAAI;AAAA,MACR;AAAA,IACF;AAAA,EACF;AAGA,QAAM,QAAQ,OAAO;AACrB,QAAM,MAAM,OAAO;AACnB,MAAI,KAAK,aAAa,SAAS;AAC7B,QAAI,WAAW;AAAA,EACjB;AAGA,QAAM,gBAAgB,cAAc,QAAQ,UAAU,CAAC,QAAQ;AAE7D,YAAQ,OAAO,MAAM,oBAAoB,GAAG;AAAA,CAAI;AAAA,EAClD,CAAC;AAGD,QAAM,SAAS,iBAAiB,MAAM,MAAM;AAG5C,QAAM,aAAa,kBACb,OAAO,kBAA4B,KAAK,6BACzC,EAAE,YAAY;AAEnB,MAAI,YAAY;AACd,UAAM,aAAa,KAAK,MAAM,KAAK,UAAU,MAAM,CAAC;AACpD,IAAAD,IAAG,cAAc,YAAY,YAAAC,QAAK,UAAU,UAAU,GAAG,OAAO;AAAA,EAClE;AAEA,SAAO;AACT;","names":["fs","path","path","fs","YAML"]}

package/dist/{chunk-4FCFRJIQ.js → chunk-UKWO26VI.js}

@@ -5,7 +5,7 @@ import {
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -144,4 +144,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=chunk-4FCFRJIQ.js.map
+//# sourceMappingURL=chunk-UKWO26VI.js.map

package/dist/{chunk-YZO22BBI.js → chunk-V2OWD2VV.js}

@@ -2,14 +2,14 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   formatSporeBody,
   sessionNoteId
-} from "./chunk-TZDDXRHG.js";
+} from "./chunk-I7PNZEBO.js";
 import {
   ARTIFACT_TYPES,
   indexNote
-} from "./chunk-S7EIHYE7.js";
+} from "./chunk-FPEDTLQ6.js";
 import {
   external_exports
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   AgentRegistry
 } from "./chunk-BNIYWCST.js";
@@ -373,4 +373,4 @@ export {
   extractTurnsFromBuffer,
   writeObservationNotes
 };
-//# sourceMappingURL=chunk-YZO22BBI.js.map
+//# sourceMappingURL=chunk-V2OWD2VV.js.map

package/dist/{chunk-RDXTQ436.js → chunk-WBT5DWGC.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   stripFrontmatter
-} from "./chunk-NUA7UTIY.js";
+} from "./chunk-MIU3DKLN.js";
 import {
   DIGEST_TIERS
 } from "./chunk-JBD5KP5G.js";
@@ -46,4 +46,4 @@ function handleMycoContext(vaultDir, input) {
 export {
   handleMycoContext
 };
-//# sourceMappingURL=chunk-RDXTQ436.js.map
+//# sourceMappingURL=chunk-WBT5DWGC.js.map

package/dist/{cli-ZN6VBA7V.js → cli-PMOFCZQL.js}

@@ -2,9 +2,9 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   loadEnv
-} from "./chunk-XHWIIU5D.js";
+} from "./chunk-GFBG73P4.js";
 import "./chunk-SAKJMNSR.js";
-import "./chunk-P7RNAYU7.js";
+import "./chunk-67R6EMYD.js";
 import {
   resolveVaultDir
 } from "./chunk-N33KUCFP.js";
@@ -41,8 +41,8 @@ async function main() {
     process.stdout.write(USAGE);
     return;
   }
-  if (cmd === "init") return (await import("./init-7UXGDOFS.js")).run(args);
-  if (cmd === "detect-providers") return (await import("./detect-providers-5FU3BN5Q.js")).run(args);
+  if (cmd === "init") return (await import("./init-NUF5UBUJ.js")).run(args);
+  if (cmd === "detect-providers") return (await import("./detect-providers-IRL2TTLK.js")).run(args);
   if (cmd === "version" || cmd === "--version" || cmd === "-v") {
     const { getPluginVersion } = await import("./version-5B2TWXQJ.js");
     console.log(getPluginVersion());
@@ -55,27 +55,27 @@ async function main() {
   }
   switch (cmd) {
     case "config":
-      return (await import("./config-4GGMWGAF.js")).run(args, vaultDir);
+      return (await import("./config-5FGLQGCW.js")).run(args, vaultDir);
     case "verify":
-      return (await import("./verify-4H6CEE5T.js")).run(args, vaultDir);
+      return (await import("./verify-JFHQH55Z.js")).run(args, vaultDir);
     case "stats":
-      return (await import("./stats-IVIXIKTS.js")).run(args, vaultDir);
+      return (await import("./stats-6G7SN5YZ.js")).run(args, vaultDir);
     case "search":
-      return (await import("./search-2VEN3XIG.js")).run(args, vaultDir);
+      return (await import("./search-MPD7SFK6.js")).run(args, vaultDir);
     case "vectors":
-      return (await import("./search-2VEN3XIG.js")).runVectors(args, vaultDir);
+      return (await import("./search-MPD7SFK6.js")).runVectors(args, vaultDir);
     case "session":
       return (await import("./session-QF6MILAC.js")).run(args, vaultDir);
     case "setup-llm":
-      return (await import("./setup-llm-DWEJE3JE.js")).run(args, vaultDir);
+      return (await import("./setup-llm-XCCH5LYD.js")).run(args, vaultDir);
     case "setup-digest":
-      return (await import("./setup-digest-ETCZAUIU.js")).run(args, vaultDir);
+      return (await import("./setup-digest-K732MGOJ.js")).run(args, vaultDir);
     case "restart":
-      return (await import("./restart-5UY2KV54.js")).run(args, vaultDir);
+      return (await import("./restart-ABW4ZK3P.js")).run(args, vaultDir);
     case "rebuild":
-      return (await import("./rebuild-QDSYYCS7.js")).run(args, vaultDir);
+      return (await import("./rebuild-E6YFIRYZ.js")).run(args, vaultDir);
     case "reprocess":
-      return (await import("./reprocess-ZNUQCIS3.js")).run(args, vaultDir);
+      return (await import("./reprocess-7G7KQWCN.js")).run(args, vaultDir);
     case "logs":
       return (await import("./logs-BSTBZHDR.js")).run(args, vaultDir);
     default:
@@ -88,4 +88,4 @@ main().catch((err) => {
   console.error(`myco: ${err.message}`);
   process.exit(1);
 });
-//# sourceMappingURL=cli-ZN6VBA7V.js.map
+//# sourceMappingURL=cli-PMOFCZQL.js.map

package/dist/{config-4GGMWGAF.js → config-5FGLQGCW.js}

@@ -1,11 +1,11 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   loadConfig
-} from "./chunk-QQ36XEJP.js";
+} from "./chunk-TBRZAJ7W.js";
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   __toESM
 } from "./chunk-PZUWP5VK.js";
@@ -98,4 +98,4 @@ function parseValue(raw) {
 export {
   run
 };
-//# sourceMappingURL=config-4GGMWGAF.js.map
+//# sourceMappingURL=config-5FGLQGCW.js.map

package/dist/{detect-providers-5FU3BN5Q.js → detect-providers-IRL2TTLK.js}

@@ -2,7 +2,7 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   LmStudioBackend,
   OllamaBackend
-} from "./chunk-P7RNAYU7.js";
+} from "./chunk-67R6EMYD.js";
 import {
   PROVIDER_DETECT_TIMEOUT_MS
 } from "./chunk-JBD5KP5G.js";
@@ -32,4 +32,4 @@ async function run(_args) {
 export {
   run
 };
-//# sourceMappingURL=detect-providers-5FU3BN5Q.js.map
+//# sourceMappingURL=detect-providers-IRL2TTLK.js.map

package/dist/{init-7UXGDOFS.js → init-NUF5UBUJ.js}

@@ -7,23 +7,23 @@ import {
 } from "./chunk-AK6GNLPV.js";
 import {
   run
-} from "./chunk-VYV5IFD6.js";
+} from "./chunk-T7OC6GH5.js";
 import {
   run as run2
-} from "./chunk-4FCFRJIQ.js";
+} from "./chunk-UKWO26VI.js";
 import {
   DASHBOARD_CONTENT,
   VAULT_GITIGNORE,
   configureVaultEnv
-} from "./chunk-XHWIIU5D.js";
+} from "./chunk-GFBG73P4.js";
 import {
   parseStringFlag
 } from "./chunk-SAKJMNSR.js";
-import "./chunk-P7RNAYU7.js";
+import "./chunk-67R6EMYD.js";
 import {
   MycoConfigSchema,
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   resolveVaultDir
 } from "./chunk-N33KUCFP.js";
@@ -108,4 +108,4 @@ async function run3(args) {
 export {
   run3 as run
 };
-//# sourceMappingURL=init-7UXGDOFS.js.map
+//# sourceMappingURL=init-NUF5UBUJ.js.map

package/dist/{main-6UPAIDGS.js → main-2XEBVUR6.js}

@@ -8,10 +8,10 @@ import {
   loadPrompt,
   stripReasoningTokens,
   writeObservationNotes
-} from "./chunk-YZO22BBI.js";
+} from "./chunk-V2OWD2VV.js";
 import {
   handleMycoContext
-} from "./chunk-RDXTQ436.js";
+} from "./chunk-WBT5DWGC.js";
 import {
   DaemonLogger
 } from "./chunk-5EZ7QF6J.js";
@@ -22,38 +22,38 @@ import {
   sessionNoteId,
   sessionRelativePath,
   sessionWikilink
-} from "./chunk-TZDDXRHG.js";
+} from "./chunk-I7PNZEBO.js";
 import {
   indexNote,
   rebuildIndex
-} from "./chunk-S7EIHYE7.js";
+} from "./chunk-FPEDTLQ6.js";
 import {
   generateEmbedding
 } from "./chunk-RGVBGTD6.js";
 import {
   createEmbeddingProvider,
   createLlmProvider
-} from "./chunk-IVS5MYBL.js";
+} from "./chunk-IYFKPSRP.js";
 import {
   VectorIndex
 } from "./chunk-XQXXF6MU.js";
 import {
   stripFrontmatter
-} from "./chunk-NUA7UTIY.js";
+} from "./chunk-MIU3DKLN.js";
 import {
   initFts
 } from "./chunk-6FQISQNA.js";
 import {
   MycoIndex
 } from "./chunk-AK6GNLPV.js";
-import "./chunk-P7RNAYU7.js";
+import "./chunk-67R6EMYD.js";
 import {
   loadConfig
-} from "./chunk-QQ36XEJP.js";
+} from "./chunk-TBRZAJ7W.js";
 import {
   external_exports,
   require_dist
-} from "./chunk-G6ZMTQMJ.js";
+} from "./chunk-6UJWI4IW.js";
 import {
   EventBuffer
 } from "./chunk-HIN3UVOG.js";
@@ -2775,6 +2775,7 @@ async function main() {
       }
     }
   }
+  const needsMigrationReindex = index.query({ type: "memory" }).length > 0;
   const migrated = migrateSporeFiles(vaultDir);
   if (migrated > 0) {
     logger.info("daemon", "Migrated spore files to type subdirectories", { count: migrated });
@@ -3340,6 +3341,14 @@ ${lines.join("\n")}`;
   });
   await server.start();
   logger.info("daemon", "Daemon ready", { vault: vaultDir, port: server.port });
+  if (needsMigrationReindex) {
+    setImmediate(() => {
+      logger.info("daemon", "Rebuilding index after memories\u2192spores migration (background)");
+      initFts(index);
+      rebuildIndex(index, vaultDir);
+      logger.info("daemon", "Migration reindex complete");
+    });
+  }
   const shutdown = async (signal) => {
     logger.info("daemon", `${signal} received`);
     if (activeStopProcessing) {
@@ -3367,4 +3376,4 @@ export {
 chokidar/index.js:
   (*! chokidar - MIT License (c) 2012 Paul Miller (paulmillr.com) *)
 */
-//# sourceMappingURL=main-6UPAIDGS.js.map
+//# sourceMappingURL=main-2XEBVUR6.js.map