@goondocks/myco 0.2.6 → 0.2.8

package/dist/src/mcp/server.js

@@ -1,305 +1,10 @@
-import { Server } from '@modelcontextprotocol/sdk/server/index.js';
-import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';
-import { createRequire } from 'node:module';
-function getPackageVersion() {
-    try {
-        const require = createRequire(import.meta.url);
-        return require('../../../package.json').version;
-    }
-    catch {
-        return '0.0.0';
-    }
-}
-import { ListToolsRequestSchema, CallToolRequestSchema, } from '@modelcontextprotocol/sdk/types.js';
-import { MycoIndex } from '../index/sqlite.js';
-import { initFts } from '../index/fts.js';
-import { handleMycoSearch } from './tools/search.js';
-import { handleMycoRecall } from './tools/recall.js';
-import { handleMycoRemember } from './tools/remember.js';
-import { handleMycoPlans } from './tools/plans.js';
-import { handleMycoSessions } from './tools/sessions.js';
-import { handleMycoTeam } from './tools/team.js';
-import { handleMycoGraph, handleMycoOrphans } from './tools/graph.js';
-import { handleMycoLogs } from './tools/logs.js';
-import { handleMycoSupersede } from './tools/supersede.js';
-import { handleMycoConsolidate } from './tools/consolidate.js';
-import { resolveVaultDir } from '../vault/resolve.js';
-import { loadConfig } from '../config/loader.js';
-import { createEmbeddingProvider } from '../intelligence/llm.js';
-import { VectorIndex } from '../index/vectors.js';
-import { generateEmbedding } from '../intelligence/embeddings.js';
-import { PlanFrontmatterSchema } from '../vault/types.js';
-import { EMBEDDING_INPUT_LIMIT } from '../constants.js';
-import { fileURLToPath } from 'node:url';
-import path from 'node:path';
-import fs from 'node:fs';
-// Common observation types shown as hints in the tool schema; the vault accepts any string
-const OBSERVATION_TYPES = ['gotcha', 'bug_fix', 'decision', 'discovery', 'trade_off', 'cross-cutting'];
-const PLAN_STATUSES = [...PlanFrontmatterSchema.shape.status._def.innerType.options, 'all'];
-const TOOL_DEFINITIONS = [
-    {
-        name: 'myco_search',
-        description: 'Combined semantic + full-text search across the vault',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                query: { type: 'string', description: 'Search query' },
-                type: { type: 'string', enum: ['session', 'plan', 'memory', 'all'] },
-                limit: { type: 'number', default: 10 },
-            },
-            required: ['query'],
-        },
-    },
-    {
-        name: 'myco_recall',
-        description: 'Automatic context retrieval based on current work',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                branch: { type: 'string' },
-                files: { type: 'array', items: { type: 'string' } },
-            },
-        },
-    },
-    {
-        name: 'myco_remember',
-        description: 'Store an observation as a memory note',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                content: { type: 'string' },
-                type: { type: 'string', enum: OBSERVATION_TYPES },
-                tags: { type: 'array', items: { type: 'string' } },
-                related_plan: { type: 'string' },
-            },
-            required: ['content', 'type'],
-        },
-    },
-    {
-        name: 'myco_plans',
-        description: 'List active plans with progress',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                status: { type: 'string', enum: PLAN_STATUSES },
-                id: { type: 'string' },
-            },
-        },
-    },
-    {
-        name: 'myco_sessions',
-        description: 'Query session history with filters',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                plan: { type: 'string' },
-                branch: { type: 'string' },
-                user: { type: 'string' },
-                since: { type: 'string' },
-                limit: { type: 'number' },
-            },
-        },
-    },
-    {
-        name: 'myco_team',
-        description: 'Teammate activity on same files or plan',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                files: { type: 'array', items: { type: 'string' } },
-                plan: { type: 'string' },
-                since: { type: 'string' },
-            },
-        },
-    },
-    {
-        name: 'myco_graph',
-        description: 'Traverse vault connections via wikilinks — find related notes by following links',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                note_id: { type: 'string', description: 'Note ID to start from (e.g. "session-abc123")' },
-                direction: { type: 'string', enum: ['incoming', 'outgoing', 'both'], description: 'Link direction (default: both)' },
-                depth: { type: 'number', description: 'Traversal depth 1-3 (default: 1)' },
-            },
-            required: ['note_id'],
-        },
-    },
-    {
-        name: 'myco_orphans',
-        description: 'Find vault notes with no incoming or outgoing wikilinks',
-        inputSchema: {
-            type: 'object',
-            properties: {},
-        },
-    },
-    {
-        name: 'myco_logs',
-        description: 'View daemon and MCP activity logs with filtering — useful for debugging and auditing',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                limit: { type: 'number', description: 'Max entries to return (default 50)' },
-                level: { type: 'string', enum: ['debug', 'info', 'warn', 'error'], description: 'Minimum log level' },
-                component: { type: 'string', description: 'Filter by component (daemon, processor, hooks, lifecycle, embeddings, mcp, lineage, watcher)' },
-                since: { type: 'string', description: 'ISO timestamp — entries after this time' },
-                until: { type: 'string', description: 'ISO timestamp — entries before this time' },
-            },
-        },
-    },
-    {
-        name: 'myco_supersede',
-        description: 'Mark a memory as superseded by a newer one — use when an older observation is outdated, incorrect, or replaced by better understanding',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                old_memory_id: { type: 'string', description: 'ID of the memory to supersede' },
-                new_memory_id: { type: 'string', description: 'ID of the memory that replaces it' },
-                reason: { type: 'string', description: 'Why this memory is being superseded' },
-            },
-            required: ['old_memory_id', 'new_memory_id'],
-        },
-    },
-    {
-        name: 'myco_consolidate',
-        description: 'Merge multiple related memories into a single wisdom note — use when several observations describe aspects of the same insight or pattern',
-        inputSchema: {
-            type: 'object',
-            properties: {
-                source_memory_ids: { type: 'array', items: { type: 'string' }, description: 'IDs of memories to consolidate' },
-                consolidated_content: { type: 'string', description: 'The merged, comprehensive content for the wisdom note' },
-                observation_type: { type: 'string', enum: OBSERVATION_TYPES, description: 'Type for the consolidated note' },
-                tags: { type: 'array', items: { type: 'string' }, description: 'Tags for the wisdom note' },
-            },
-            required: ['source_memory_ids', 'consolidated_content', 'observation_type'],
-        },
-    },
-];
-export function createMycoServer(config) {
-    const server = new Server({ name: 'myco', version: getPackageVersion() }, { capabilities: { tools: {} } });
-    const dbPath = path.join(config.vaultDir, 'index.db');
-    let index = null;
-    function getIndex() {
-        if (!index) {
-            index = new MycoIndex(dbPath);
-            initFts(index);
-        }
-        return index;
-    }
-    /** Embed a note and upsert into vector index (fire-and-forget). */
-    function embedNote(noteId, text, metadata) {
-        if (!config.embeddingProvider || !config.vectorIndex || !text)
-            return;
-        generateEmbedding(config.embeddingProvider, text.slice(0, EMBEDDING_INPUT_LIMIT))
-            .then((emb) => config.vectorIndex.upsert(noteId, emb.embedding, metadata))
-            .catch(() => { });
-    }
-    server.setRequestHandler(ListToolsRequestSchema, async () => ({
-        tools: TOOL_DEFINITIONS,
-    }));
-    /** Log MCP tool activity to vault logs for auditability. */
-    function logActivity(tool, detail) {
-        const logDir = path.join(config.vaultDir, 'logs');
-        try {
-            fs.mkdirSync(logDir, { recursive: true });
-            const entry = JSON.stringify({ timestamp: new Date().toISOString(), component: 'mcp', level: 'info', tool, ...detail }) + '\n';
-            fs.appendFileSync(path.join(logDir, 'mcp.jsonl'), entry);
-        }
-        catch { /* logging failure is non-fatal */ }
-    }
-    server.setRequestHandler(CallToolRequestSchema, async (request) => {
-        const { name, arguments: args = {} } = request.params;
-        const idx = getIndex();
-        const input = args;
-        switch (name) {
-            case 'myco_search':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoSearch(idx, input, config.vectorIndex, config.embeddingProvider)) }] };
-            case 'myco_recall':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoRecall(idx, input)) }] };
-            case 'myco_remember': {
-                const result = await handleMycoRemember(config.vaultDir, idx, input);
-                embedNote(result.id, String(input.content), { type: 'memory', observation_type: String(input.type ?? ''), importance: 'high' });
-                logActivity('myco_remember', { id: result.id, observation_type: input.type, path: result.note_path });
-                return { content: [{ type: 'text', text: JSON.stringify(result) }] };
-            }
-            case 'myco_plans':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoPlans(idx, input)) }] };
-            case 'myco_sessions':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoSessions(idx, input)) }] };
-            case 'myco_team':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoTeam(idx, input, config.teamUser)) }] };
-            case 'myco_graph':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoGraph(idx, input)) }] };
-            case 'myco_orphans':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoOrphans(idx)) }] };
-            case 'myco_logs':
-                return { content: [{ type: 'text', text: JSON.stringify(await handleMycoLogs(config.vaultDir, input)) }] };
-            case 'myco_supersede': {
-                const result = await handleMycoSupersede(config.vaultDir, idx, input);
-                if (result.status === 'superseded' && config.vectorIndex) {
-                    config.vectorIndex.delete(result.old_memory);
-                }
-                logActivity('myco_supersede', { old: result.old_memory, new: result.new_memory, status: result.status });
-                return { content: [{ type: 'text', text: JSON.stringify(result) }] };
-            }
-            case 'myco_consolidate': {
-                const result = await handleMycoConsolidate(config.vaultDir, idx, input);
-                embedNote(result.wisdom_id, String(input.consolidated_content), { type: 'memory', observation_type: String(input.observation_type ?? ''), importance: 'high' });
-                if (config.vectorIndex && Array.isArray(input.source_memory_ids)) {
-                    for (const id of input.source_memory_ids) {
-                        config.vectorIndex.delete(id);
-                    }
-                }
-                logActivity('myco_consolidate', { wisdom_id: result.wisdom_id, sources: input.source_memory_ids, archived: result.sources_archived });
-                return { content: [{ type: 'text', text: JSON.stringify(result) }] };
-            }
-            default:
-                throw new Error(`Unknown tool: ${name}`);
-        }
-    });
-    return {
-        name: 'myco',
-        getRegisteredTools() {
-            return TOOL_DEFINITIONS.map((t) => t.name);
-        },
-        async start() {
-            const transport = new StdioServerTransport();
-            await server.connect(transport);
-        },
-    };
-}
-// Entry point — invoked by .mcp.json: node dist/src/mcp/server.js
-const __filename = fileURLToPath(import.meta.url);
-if (process.argv[1] === __filename) {
-    main().catch((err) => {
-        process.stderr.write(`[myco-mcp] Fatal: ${err.message}\n`);
-        process.exit(1);
-    });
-}
-async function main() {
-    const vaultDir = resolveVaultDir();
-    const config = fs.existsSync(path.join(vaultDir, 'myco.yaml'))
-        ? loadConfig(vaultDir)
-        : undefined;
-    // Initialize embedding provider + vector index (same as daemon does)
-    let embeddingProvider;
-    let vectorIndex;
-    if (config) {
-        try {
-            embeddingProvider = createEmbeddingProvider(config.intelligence.embedding);
-            const testEmbed = await embeddingProvider.embed('test');
-            vectorIndex = new VectorIndex(path.join(vaultDir, 'vectors.db'), testEmbed.dimensions);
-        }
-        catch {
-            // Embedding unavailable — MCP tools fall back to FTS only
-        }
-    }
-    const server = createMycoServer({
-        vaultDir,
-        teamUser: config?.team?.user,
-        embeddingProvider,
-        vectorIndex,
-    });
-    await server.start();
-}
+import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
+import {
+  ensureNativeDeps
+} from "../../chunk-4JML636J.js";
+import "../../chunk-PZUWP5VK.js";
+
+// src/entries/mcp-server.ts
+ensureNativeDeps();
+await import("../../server-PIEPVUUH.js");
 //# sourceMappingURL=server.js.map

package/dist/src/mcp/server.js.map

@@ -1 +1 @@
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+{"version":3,"sources":["../../../src/entries/mcp-server.ts"],"sourcesContent":["import { ensureNativeDeps } from '../native-deps.js';\nensureNativeDeps();\nawait import('../mcp/server.js');\n"],"mappings":";;;;;;;AACA,iBAAiB;AACjB,MAAM,OAAO,0BAAkB;","names":[]}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@goondocks/myco",
-  "version": "0.2.6",
+  "version": "0.2.8",
   "description": "Collective agent intelligence — Claude Code plugin",
   "type": "module",
   "main": "dist/index.js",
@@ -18,8 +18,9 @@
   ],
   "scripts": {
     "prepare": "npm run build",
-    "build": "tsc",
+    "build": "tsup",
     "build:watch": "tsc --watch",
+    "build:types": "tsc",
     "test": "vitest run",
     "test:watch": "vitest",
     "lint": "tsc --noEmit"

package/dist/src/agents/adapter.d.ts

@@ -1,76 +0,0 @@
-/** An image attached to a conversation turn */
-export interface TranscriptImage {
-    /** Base64-encoded image data */
-    data: string;
-    /** MIME type (e.g., image/png) */
-    mediaType: string;
-}
-/** A single conversation turn extracted from an agent's transcript */
-export interface TranscriptTurn {
-    prompt: string;
-    toolCount: number;
-    aiResponse?: string;
-    timestamp: string;
-    /** Images attached to this turn's user prompt */
-    images?: TranscriptImage[];
-}
-/**
- * Maps agent-specific hook field names to normalized names.
- * Each agent's hook system uses different field names for the same data.
- */
-export interface HookFieldNames {
-    /** Field name for the transcript file path (e.g., 'transcript_path') */
-    transcriptPath: string;
-    /** Field name for the last AI response text (e.g., 'last_assistant_message') */
-    lastResponse: string;
-    /** Field name for the session ID (e.g., 'session_id') */
-    sessionId: string;
-}
-export interface AgentAdapter {
-    /** Agent identifier (matches plugin directory names) */
-    readonly name: string;
-    /** Human-readable display name */
-    readonly displayName: string;
-    /** Environment variable for the plugin root directory */
-    readonly pluginRootEnvVar: string;
-    /** Maps agent-specific hook body field names to normalized names */
-    readonly hookFields: HookFieldNames;
-    /**
-     * Find the transcript file for a given session ID.
-     * Returns the absolute path if found, null otherwise.
-     */
-    findTranscript(sessionId: string): string | null;
-    /**
-     * Parse a transcript file's content into normalized turns.
-     * Each adapter handles its agent's specific format.
-     */
-    parseTurns(content: string): TranscriptTurn[];
-}
-/**
- * Scan subdirectories of baseDir for a JSONL transcript file matching sessionId.
- * Shared by claude-code, cursor, custom adapters, and tests.
- */
-export declare function findJsonlInSubdirs(baseDir: string, sessionId: string): string | null;
-/**
- * Factory for creating simple per-project adapters from a base directory.
- * Used for user-configured transcript_paths and testing.
- */
-export declare function createPerProjectAdapter(baseDir: string, parseTurns: AgentAdapter['parseTurns'], name?: string): AgentAdapter;
-export declare function extensionForMimeType(mimeType: string): string;
-export declare function mimeTypeForExtension(ext: string): string;
-export interface ParseJsonlOptions {
-    /** Field name containing the message role ('type' for Claude Code, 'role' for Cursor) */
-    roleField: 'type' | 'role';
-    /** Whether entries have a timestamp field to extract */
-    extractTimestamp: boolean;
-    /** Whether to check for text-only user messages (Claude Code has tool_result user messages to skip) */
-    skipToolResultUsers: boolean;
-    /** Whether to strip [Image: source: ...] text references from prompts (Claude Code-specific) */
-    stripImageTextRefs: boolean;
-}
-/**
- * Shared JSONL transcript parser — used by both Claude Code and Cursor adapters.
- * Handles user/assistant role detection, text/image extraction, and tool counting.
- */
-export declare function parseJsonlTurns(content: string, opts: ParseJsonlOptions): TranscriptTurn[];
-//# sourceMappingURL=adapter.d.ts.map

package/dist/src/agents/adapter.d.ts.map

@@ -1 +0,0 @@
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package/dist/src/agents/adapter.js

@@ -1,124 +0,0 @@
-/**
- * Agent adapter interface — declares what each coding agent provides to Myco.
- *
- * Each supported agent (Claude Code, Cursor, Cline, etc.) has an adapter that
- * tells Myco where to find transcripts, how to parse them, and what capabilities
- * the agent supports. The daemon uses these adapters at runtime to read the
- * authoritative conversation record.
- */
-import fs from 'node:fs';
-import path from 'node:path';
-/**
- * Scan subdirectories of baseDir for a JSONL transcript file matching sessionId.
- * Shared by claude-code, cursor, custom adapters, and tests.
- */
-export function findJsonlInSubdirs(baseDir, sessionId) {
-    try {
-        for (const entry of fs.readdirSync(baseDir, { withFileTypes: true })) {
-            if (!entry.isDirectory())
-                continue;
-            const candidate = path.join(baseDir, entry.name, `${sessionId}.jsonl`);
-            try {
-                fs.accessSync(candidate);
-                return candidate;
-            }
-            catch { /* not here */ }
-        }
-    }
-    catch { /* baseDir doesn't exist or unreadable */ }
-    return null;
-}
-/**
- * Factory for creating simple per-project adapters from a base directory.
- * Used for user-configured transcript_paths and testing.
- */
-export function createPerProjectAdapter(baseDir, parseTurns, name) {
-    return {
-        name: name ?? `custom:${path.basename(baseDir)}`,
-        displayName: `Custom (${baseDir})`,
-        pluginRootEnvVar: '',
-        hookFields: { transcriptPath: 'transcript_path', lastResponse: 'last_assistant_message', sessionId: 'session_id' },
-        findTranscript: (sessionId) => findJsonlInSubdirs(baseDir, sessionId),
-        parseTurns,
-    };
-}
-/** Map MIME type to file extension */
-const MIME_TO_EXT = {
-    'image/jpeg': 'jpg',
-    'image/gif': 'gif',
-    'image/webp': 'webp',
-    'image/png': 'png',
-};
-export function extensionForMimeType(mimeType) {
-    return MIME_TO_EXT[mimeType] ?? 'png';
-}
-/** Map file extension to MIME type */
-const EXT_TO_MIME = {
-    '.jpg': 'image/jpeg',
-    '.jpeg': 'image/jpeg',
-    '.gif': 'image/gif',
-    '.webp': 'image/webp',
-    '.png': 'image/png',
-};
-export function mimeTypeForExtension(ext) {
-    return EXT_TO_MIME[ext.toLowerCase()] ?? 'image/png';
-}
-import { PROMPT_PREVIEW_CHARS } from '../constants.js';
-/** Claude Code injects [Image: source: /path] text alongside base64 image blocks. Strip these since the actual images are captured as Obsidian embeds. */
-const IMAGE_TEXT_REF_PATTERN = /\[Image: source: [^\]]+\]\n*/g;
-/**
- * Shared JSONL transcript parser — used by both Claude Code and Cursor adapters.
- * Handles user/assistant role detection, text/image extraction, and tool counting.
- */
-export function parseJsonlTurns(content, opts) {
-    const lines = content.split('\n').filter(Boolean);
-    const turns = [];
-    let current = null;
-    for (const line of lines) {
-        let entry;
-        try {
-            entry = JSON.parse(line);
-        }
-        catch {
-            continue;
-        }
-        const role = entry[opts.roleField];
-        const timestamp = opts.extractTimestamp ? (entry.timestamp ?? '') : '';
-        if (role === 'user') {
-            const msg = entry.message;
-            const blocks = Array.isArray(msg?.content) ? msg.content : [];
-            const hasText = blocks.some((b) => b.type === 'text' && b.text?.trim());
-            if (!hasText && opts.skipToolResultUsers)
-                continue;
-            if (!hasText)
-                continue;
-            if (current)
-                turns.push(current);
-            const rawPrompt = blocks
-                .filter((b) => b.type === 'text' && b.text)
-                .map((b) => b.text)
-                .join('\n');
-            const promptText = (opts.stripImageTextRefs ? rawPrompt.replace(IMAGE_TEXT_REF_PATTERN, '') : rawPrompt)
-                .trim()
-                .slice(0, PROMPT_PREVIEW_CHARS);
-            const images = blocks
-                .filter((b) => b.type === 'image' && b.source?.type === 'base64' && b.source.data)
-                .map((b) => ({ data: b.source.data, mediaType: b.source.media_type ?? 'image/png' }));
-            current = { prompt: promptText, toolCount: 0, timestamp, ...(images.length > 0 ? { images } : {}) };
-        }
-        else if (role === 'assistant' && current) {
-            const msg = entry.message;
-            if (Array.isArray(msg?.content)) {
-                const textParts = msg.content.filter((b) => b.type === 'text' && b.text).map((b) => b.text);
-                const text = textParts.join('\n').trim();
-                if (text)
-                    current.aiResponse = text;
-                current.toolCount += msg.content.filter((b) => b.type === 'tool_use').length;
-            }
-        }
-    }
-    if (current)
-        turns.push(current);
-    return turns;
-}
-//# sourceMappingURL=adapter.js.map

package/dist/src/agents/adapter.js.map

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package/dist/src/agents/claude-code.d.ts

@@ -1,3 +0,0 @@
-import type { AgentAdapter } from './adapter.js';
-export declare const claudeCodeAdapter: AgentAdapter;
-//# sourceMappingURL=claude-code.d.ts.map

package/dist/src/agents/claude-code.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"claude-code.d.ts","sourceRoot":"","sources":["../../../src/agents/claude-code.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAOjD,eAAO,MAAM,iBAAiB,EAAE,YAkB/B,CAAC"}

package/dist/src/agents/claude-code.js

@@ -1,22 +0,0 @@
-import { findJsonlInSubdirs, parseJsonlTurns } from './adapter.js';
-import path from 'node:path';
-import os from 'node:os';
-const TRANSCRIPT_BASE = path.join(os.homedir(), '.claude', 'projects');
-export const claudeCodeAdapter = {
-    name: 'claude-code',
-    displayName: 'Claude Code',
-    pluginRootEnvVar: 'CLAUDE_PLUGIN_ROOT',
-    hookFields: {
-        transcriptPath: 'transcript_path',
-        lastResponse: 'last_assistant_message',
-        sessionId: 'session_id',
-    },
-    findTranscript: (sessionId) => findJsonlInSubdirs(TRANSCRIPT_BASE, sessionId),
-    parseTurns: (content) => parseJsonlTurns(content, {
-        roleField: 'type',
-        extractTimestamp: true,
-        skipToolResultUsers: true,
-        stripImageTextRefs: true,
-    }),
-};
-//# sourceMappingURL=claude-code.js.map

package/dist/src/agents/claude-code.js.map

@@ -1 +0,0 @@
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package/dist/src/agents/cursor.d.ts

@@ -1,3 +0,0 @@
-import type { AgentAdapter } from './adapter.js';
-export declare const cursorAdapter: AgentAdapter;
-//# sourceMappingURL=cursor.d.ts.map

package/dist/src/agents/cursor.d.ts.map

@@ -1 +0,0 @@
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