@goondocks/myco 0.19.5 → 0.19.6

package/dist/{agent-run-3IQXE5PI.js → agent-run-WK5NKBYA.js}

@@ -1,14 +1,14 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   connectToDaemon
-} from "./chunk-5WPTS6A4.js";
+} from "./chunk-NCBLB2C6.js";
 import "./chunk-SAKJMNSR.js";
-import "./chunk-27ZDDWIA.js";
+import "./chunk-TMNFCUAD.js";
 import "./chunk-PMT2LSTQ.js";
-import "./chunk-UTSCRMJE.js";
+import "./chunk-NKQZ73LL.js";
 import "./chunk-MYX5NCRH.js";
-import "./chunk-2QJCV3UL.js";
-import "./chunk-VH7XYQFL.js";
+import "./chunk-QH5HS54N.js";
+import "./chunk-ST2D3SGM.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-I54KLC6H.js";
 import "./chunk-UUHLLQXO.js";
@@ -36,4 +36,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=agent-run-3IQXE5PI.js.map
+//# sourceMappingURL=agent-run-WK5NKBYA.js.map

package/dist/{agent-tasks-5DIA3CE5.js → agent-tasks-2E73GG3A.js}

@@ -1,14 +1,14 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   connectToDaemon
-} from "./chunk-5WPTS6A4.js";
+} from "./chunk-NCBLB2C6.js";
 import "./chunk-SAKJMNSR.js";
-import "./chunk-27ZDDWIA.js";
+import "./chunk-TMNFCUAD.js";
 import "./chunk-PMT2LSTQ.js";
-import "./chunk-UTSCRMJE.js";
+import "./chunk-NKQZ73LL.js";
 import "./chunk-MYX5NCRH.js";
-import "./chunk-2QJCV3UL.js";
-import "./chunk-VH7XYQFL.js";
+import "./chunk-QH5HS54N.js";
+import "./chunk-ST2D3SGM.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-I54KLC6H.js";
 import "./chunk-UUHLLQXO.js";
@@ -182,4 +182,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=agent-tasks-5DIA3CE5.js.map
+//# sourceMappingURL=agent-tasks-2E73GG3A.js.map

package/dist/{chunk-QLCD77AN.js → chunk-6RFZWV4R.js}

@@ -54,6 +54,22 @@ function insertTurn(data) {
     db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_turns WHERE id = ?`).get(turnId)
   );
 }
+function updateTurn(id, completion) {
+  const db = getDatabase();
+  const info = db.prepare(
+    `UPDATE agent_turns
+     SET tool_output_summary = ?, completed_at = ?
+     WHERE id = ?`
+  ).run(
+    completion.tool_output_summary ?? null,
+    completion.completed_at ?? null,
+    id
+  );
+  if (info.changes === 0) return null;
+  return toTurnRow(
+    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_turns WHERE id = ?`).get(id)
+  );
+}
 function listTurns(runId) {
   const db = getDatabase();
   const rows = db.prepare(
@@ -86,8 +102,9 @@ function countToolCallsByRun(runId, toolNames) {
 
 export {
   insertTurn,
+  updateTurn,
   listTurns,
   listTurnsByRun,
   countToolCallsByRun
 };
-//# sourceMappingURL=chunk-QLCD77AN.js.map
+//# sourceMappingURL=chunk-6RFZWV4R.js.map

package/dist/chunk-6RFZWV4R.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/db/queries/turns.ts"],"sourcesContent":["/**\n * Agent turn CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting a turn. */\nexport interface TurnInsert {\n  run_id: string;\n  agent_id: string;\n  turn_number: number;\n  tool_name: string;\n  tool_input?: string | null;\n  tool_output_summary?: string | null;\n  started_at?: number | null;\n  completed_at?: number | null;\n}\n\n/** Fields that can be updated after a turn row has been created. */\nexport interface TurnCompletion {\n  tool_output_summary?: string | null;\n  completed_at?: number | null;\n}\n\n/** Row shape returned from agent_turns queries (all columns). */\nexport interface TurnRow {\n  id: number;\n  run_id: string;\n  agent_id: string;\n  turn_number: number;\n  tool_name: string;\n  tool_input: string | null;\n  tool_output_summary: string | null;\n  started_at: number | null;\n  completed_at: number | null;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst TURN_COLUMNS = [\n  'id',\n  'run_id',\n  'agent_id',\n  'turn_number',\n  'tool_name',\n  'tool_input',\n  'tool_output_summary',\n  'started_at',\n  'completed_at',\n] as const;\n\nconst SELECT_COLUMNS = TURN_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/** Normalize a SQLite result row into a typed TurnRow. */\nfunction toTurnRow(row: Record<string, unknown>): TurnRow {\n  return {\n    id: row.id as number,\n    run_id: row.run_id as string,\n    agent_id: row.agent_id as string,\n    turn_number: row.turn_number as number,\n    tool_name: row.tool_name as string,\n    tool_input: (row.tool_input as string) ?? null,\n    tool_output_summary: (row.tool_output_summary as string) ?? null,\n    started_at: (row.started_at as number) ?? null,\n    completed_at: (row.completed_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a new agent turn.\n *\n * The `id` is auto-generated by the INTEGER PRIMARY KEY (AUTOINCREMENT).\n */\nexport function insertTurn(data: TurnInsert): TurnRow {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `INSERT INTO agent_turns (\n       run_id, agent_id, turn_number, tool_name,\n       tool_input, tool_output_summary, started_at, completed_at\n     ) VALUES (\n       ?, ?, ?, ?,\n       ?, ?, ?, ?\n     )`,\n  ).run(\n    data.run_id,\n    data.agent_id,\n    data.turn_number,\n    data.tool_name,\n    data.tool_input ?? null,\n    data.tool_output_summary ?? null,\n    data.started_at ?? null,\n    data.completed_at ?? null,\n  );\n\n  const turnId = Number(info.lastInsertRowid);\n\n  return toTurnRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_turns WHERE id = ?`).get(turnId) as Record<string, unknown>,\n  );\n}\n\n/**\n * Update completion metadata for an existing turn.\n *\n * @returns the updated row, or null if the turn does not exist.\n */\nexport function updateTurn(id: number, completion: TurnCompletion): TurnRow | null {\n  const db = getDatabase();\n\n  const info = db.prepare(\n    `UPDATE agent_turns\n     SET tool_output_summary = ?, completed_at = ?\n     WHERE id = ?`,\n  ).run(\n    completion.tool_output_summary ?? null,\n    completion.completed_at ?? null,\n    id,\n  );\n\n  if (info.changes === 0) return null;\n\n  return toTurnRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM agent_turns WHERE id = ?`).get(id) as Record<string, unknown>,\n  );\n}\n\n/**\n * List all turns for a specific run, ordered by turn_number ASC.\n */\nexport function listTurns(runId: string): TurnRow[] {\n  const db = getDatabase();\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM agent_turns\n     WHERE run_id = ?\n     ORDER BY turn_number ASC`,\n  ).all(runId) as Record<string, unknown>[];\n\n  return rows.map(toTurnRow);\n}\n\n/**\n * List all agent turns for a run, ordered by turn_number ASC.\n *\n * Alias for `listTurns` with an explicit \"by run\" naming convention used\n * by the dashboard API layer.\n */\nexport function listTurnsByRun(runId: string): TurnRow[] {\n  return listTurns(runId);\n}\n\n/** Count tool calls by name for a specific run. */\nexport function countToolCallsByRun(\n  runId: string,\n  toolNames: string[],\n): Record<string, number> {\n  if (toolNames.length === 0) return {};\n  const db = getDatabase();\n  const placeholders = toolNames.map(() => '?').join(', ');\n  const rows = db.prepare(\n    `SELECT tool_name, COUNT(*) as count\n     FROM agent_turns\n     WHERE run_id = ? AND tool_name IN (${placeholders})\n     GROUP BY tool_name`,\n  ).all(runId, ...toolNames) as Array<{ tool_name: string; count: number }>;\n\n  const result: Record<string, number> = {};\n  for (const row of rows) {\n    result[row.tool_name] = row.count;\n  }\n  return result;\n}\n"],"mappings":";;;;;;AAgDA,IAAM,eAAe;AAAA,EACnB;AAAA,EACA;AAAA,EACA;AAAA,EACA;AAAA,EACA;AAAA,EACA;AAAA,EACA;AAAA,EACA;AAAA,EACA;AACF;AAEA,IAAM,iBAAiB,aAAa,KAAK,IAAI;AAO7C,SAAS,UAAU,KAAuC;AACxD,SAAO;AAAA,IACL,IAAI,IAAI;AAAA,IACR,QAAQ,IAAI;AAAA,IACZ,UAAU,IAAI;AAAA,IACd,aAAa,IAAI;AAAA,IACjB,WAAW,IAAI;AAAA,IACf,YAAa,IAAI,cAAyB;AAAA,IAC1C,qBAAsB,IAAI,uBAAkC;AAAA,IAC5D,YAAa,IAAI,cAAyB;AAAA,IAC1C,cAAe,IAAI,gBAA2B;AAAA,EAChD;AACF;AAWO,SAAS,WAAW,MAA2B;AACpD,QAAM,KAAK,YAAY;AAEvB,QAAM,OAAO,GAAG;AAAA,IACd;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,EAOF,EAAE;AAAA,IACA,KAAK;AAAA,IACL,KAAK;AAAA,IACL,KAAK;AAAA,IACL,KAAK;AAAA,IACL,KAAK,cAAc;AAAA,IACnB,KAAK,uBAAuB;AAAA,IAC5B,KAAK,cAAc;AAAA,IACnB,KAAK,gBAAgB;AAAA,EACvB;AAEA,QAAM,SAAS,OAAO,KAAK,eAAe;AAE1C,SAAO;AAAA,IACL,GAAG,QAAQ,UAAU,cAAc,gCAAgC,EAAE,IAAI,MAAM;AAAA,EACjF;AACF;AAOO,SAAS,WAAW,IAAY,YAA4C;AACjF,QAAM,KAAK,YAAY;AAEvB,QAAM,OAAO,GAAG;AAAA,IACd;AAAA;AAAA;AAAA,EAGF,EAAE;AAAA,IACA,WAAW,uBAAuB;AAAA,IAClC,WAAW,gBAAgB;AAAA,IAC3B;AAAA,EACF;AAEA,MAAI,KAAK,YAAY,EAAG,QAAO;AAE/B,SAAO;AAAA,IACL,GAAG,QAAQ,UAAU,cAAc,gCAAgC,EAAE,IAAI,EAAE;AAAA,EAC7E;AACF;AAKO,SAAS,UAAU,OAA0B;AAClD,QAAM,KAAK,YAAY;AAEvB,QAAM,OAAO,GAAG;AAAA,IACd,UAAU,cAAc;AAAA;AAAA;AAAA;AAAA,EAI1B,EAAE,IAAI,KAAK;AAEX,SAAO,KAAK,IAAI,SAAS;AAC3B;AAQO,SAAS,eAAe,OAA0B;AACvD,SAAO,UAAU,KAAK;AACxB;AAGO,SAAS,oBACd,OACA,WACwB;AACxB,MAAI,UAAU,WAAW,EAAG,QAAO,CAAC;AACpC,QAAM,KAAK,YAAY;AACvB,QAAM,eAAe,UAAU,IAAI,MAAM,GAAG,EAAE,KAAK,IAAI;AACvD,QAAM,OAAO,GAAG;AAAA,IACd;AAAA;AAAA,0CAEsC,YAAY;AAAA;AAAA,EAEpD,EAAE,IAAI,OAAO,GAAG,SAAS;AAEzB,QAAM,SAAiC,CAAC;AACxC,aAAW,OAAO,MAAM;AACtB,WAAO,IAAI,SAAS,IAAI,IAAI;AAAA,EAC9B;AACA,SAAO;AACT;","names":[]}

package/dist/{chunk-KABTXALI.js → chunk-FKBPXCH3.js}

@@ -5,7 +5,7 @@ import {
 import {
   loadConfig,
   updateTeamConfig
-} from "./chunk-UTSCRMJE.js";
+} from "./chunk-NKQZ73LL.js";
 import {
   TEAM_API_KEY_SECRET,
   TEAM_MCP_TOKEN_SECRET,
@@ -595,4 +595,4 @@ export {
   upgradeWorker,
   teamUpgrade
 };
-//# sourceMappingURL=chunk-KABTXALI.js.map
+//# sourceMappingURL=chunk-FKBPXCH3.js.map

package/dist/{chunk-5WPTS6A4.js → chunk-NCBLB2C6.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   SymbiontInstaller
-} from "./chunk-27ZDDWIA.js";
+} from "./chunk-TMNFCUAD.js";
 import {
   LmStudioBackend,
   OllamaBackend
@@ -13,7 +13,7 @@ import {
 } from "./chunk-MYX5NCRH.js";
 import {
   DaemonClient
-} from "./chunk-2QJCV3UL.js";
+} from "./chunk-QH5HS54N.js";
 
 // src/cli/shared.ts
 import fs from "fs";
@@ -123,4 +123,4 @@ export {
   VAULT_GITIGNORE,
   registerSymbionts
 };
-//# sourceMappingURL=chunk-5WPTS6A4.js.map
+//# sourceMappingURL=chunk-NCBLB2C6.js.map

package/dist/{chunk-UTSCRMJE.js → chunk-NKQZ73LL.js}

@@ -124,7 +124,7 @@ var NotificationsSchema = external_exports.object({
   /** Allow browser system notifications (Notification API). */
   system_notifications: external_exports.boolean().default(false),
   /** Default display mode for new notification types. */
-  default_mode: external_exports.enum(["banner", "summary"]).default("banner"),
+  default_mode: external_exports.enum(["banner", "summary"]).default("summary"),
   /** Per-domain settings. Keys are domain names from the registry. */
   domains: external_exports.record(external_exports.string(), external_exports.object({
     enabled: external_exports.boolean().default(true),
@@ -436,4 +436,4 @@ export {
   getEnabledSymbiontNames,
   updateTeamConfig
 };
-//# sourceMappingURL=chunk-UTSCRMJE.js.map
+//# sourceMappingURL=chunk-NKQZ73LL.js.map

package/dist/chunk-NKQZ73LL.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/config/loader.ts","../src/config/schema.ts","../src/config/migrations.ts"],"sourcesContent":["import fs from 'node:fs';\nimport path from 'node:path';\nimport YAML from 'yaml';\nimport { MycoConfigSchema, type MycoConfig, type BackupConfig, type TeamConfig } from './schema.js';\nimport { runMigrations, CURRENT_MIGRATION_VERSION } from './migrations.js';\n\nexport const CONFIG_FILENAME = 'myco.yaml';\n\nexport function loadConfig(vaultDir: string): MycoConfig {\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n\n  if (!fs.existsSync(configPath)) {\n    throw new Error(`myco.yaml not found in ${vaultDir}`);\n  }\n\n  const raw = fs.readFileSync(configPath, 'utf-8');\n  const parsed = YAML.parse(raw) as Record<string, unknown>;\n\n  // Detect v1 config and guide migration\n  if (parsed.version === 1 || (parsed.intelligence as Record<string, unknown>)?.backend) {\n    throw new Error(\n      'Myco config uses v1 format. Run /myco:setup-llm to reconfigure for v2.',\n    );\n  }\n\n  // --- v2 → v3 migration ---\n  let v2Migrated = false;\n  if (parsed.version === 2) {\n    // Extract intelligence.embedding to top-level embedding\n    const intel = parsed.intelligence as Record<string, unknown> | undefined;\n    const embeddingConfig = intel?.embedding as Record<string, unknown> | undefined;\n    if (embeddingConfig && !parsed.embedding) {\n      // Map v2 'lm-studio' to v3 'openai-compatible' for embedding provider\n      if (embeddingConfig.provider === 'lm-studio') {\n        embeddingConfig.provider = 'openai-compatible';\n      }\n      parsed.embedding = embeddingConfig;\n    }\n\n    // Keep daemon.port and daemon.log_level, drop grace_period and max_log_size\n    const daemon = parsed.daemon as Record<string, unknown> | undefined;\n    if (daemon) {\n      const { port, log_level } = daemon;\n      parsed.daemon = { port: port ?? null, log_level: log_level ?? 'info' };\n    }\n\n    // Keep capture basics, drop token-related fields; migrate artifact_watch → plan_dirs\n    const capture = parsed.capture as Record<string, unknown> | undefined;\n    if (capture) {\n      const { transcript_paths, artifact_watch, plan_dirs, artifact_extensions, buffer_max_events } = capture;\n      parsed.capture = {\n        transcript_paths,\n        plan_dirs: plan_dirs ?? artifact_watch,\n        artifact_extensions,\n        buffer_max_events,\n      };\n    }\n\n    // Drop removed top-level sections\n    delete parsed.intelligence;\n    delete parsed.context;\n    delete parsed.team;\n    delete parsed.digest;\n    delete parsed.pipeline;\n\n    // Set version to 3\n    parsed.version = 3;\n    v2Migrated = true;\n\n    process.stderr.write('[myco migration] Migrated config from v2 to v3\\n');\n  }\n\n  // Run numbered migrations (for v3+ forward migrations)\n  const migrationsRan = runMigrations(parsed, vaultDir, (msg) => {\n    process.stderr.write(`[myco migration] ${msg}\\n`);\n  });\n\n  // Parse with Zod to fill in defaults for new config sections\n  const config = MycoConfigSchema.parse(parsed);\n\n  // Write back if v2→v3 migration ran, numbered migrations ran, or new defaults were added\n  const needsWrite = v2Migrated\n    || migrationsRan\n    || (parsed.config_version as number ?? 0) < CURRENT_MIGRATION_VERSION\n    || parsed.version !== config.version;\n\n  if (needsWrite) {\n    const fullConfig = JSON.parse(JSON.stringify(config)) as Record<string, unknown>;\n    fs.writeFileSync(configPath, YAML.stringify(fullConfig), 'utf-8');\n  }\n\n  return config;\n}\n\nexport function saveConfig(vaultDir: string, config: MycoConfig): void {\n  // Validate before writing — OAK lesson: validate on write, not just read\n  const validated = MycoConfigSchema.parse(config);\n\n  const configPath = path.join(vaultDir, CONFIG_FILENAME);\n  fs.mkdirSync(vaultDir, { recursive: true });\n  fs.writeFileSync(configPath, YAML.stringify(validated), 'utf-8');\n}\n\nexport function updateConfig(\n  vaultDir: string,\n  fn: (config: MycoConfig) => MycoConfig,\n): MycoConfig {\n  const current = loadConfig(vaultDir);\n  const updated = fn(current);\n  saveConfig(vaultDir, updated);\n  return updated;\n}\n\nexport function updateBackupConfig(\n  vaultDir: string,\n  backup: Partial<BackupConfig>,\n): MycoConfig {\n  return updateConfig(vaultDir, (config) => ({\n    ...config,\n    backup: { ...config.backup, ...backup },\n  }));\n}\n\n/**\n * Extract the set of enabled symbiont names from config.\n * Returns null when the `symbionts` section is absent (pre-existing installs),\n * signalling callers to fall back to their own heuristic.\n */\nexport function getEnabledSymbiontNames(config: MycoConfig): Set<string> | null {\n  if (!config.symbionts) return null;\n  return new Set(\n    Object.entries(config.symbionts)\n      .filter(([, entry]) => entry.enabled)\n      .map(([name]) => name),\n  );\n}\n\nexport function updateTeamConfig(\n  vaultDir: string,\n  team: Partial<TeamConfig>,\n): MycoConfig {\n  return updateConfig(vaultDir, (config) => ({\n    ...config,\n    team: { ...config.team, ...team },\n  }));\n}\n","import { z } from 'zod';\nimport { SCHEDULABLE_POWER_STATES } from '@myco/constants.js';\n\nconst EmbeddingProviderSchema = z.object({\n  provider: z.enum(['ollama', 'openai-compatible', 'openrouter', 'openai']).default('ollama'),\n  model: z.string().default('bge-m3'),\n  base_url: z.string().url().optional(),\n});\n\nconst DaemonSchema = z.object({\n  port: z.number().int().min(1024).max(65535).nullable().default(null),\n  log_level: z.enum(['debug', 'info', 'warn', 'error']).default('info'),\n  log_retention_days: z.number().int().min(1).max(365).default(30),\n  /**\n   * Time without new prompts before an active session is auto-completed (ms).\n   * Intelligence tasks (full-intelligence, skill-survey, etc.) only process\n   * settled sessions, so this threshold directly controls how fresh their\n   * inputs are. Defaults to 1 hour.\n   */\n  stale_session_threshold_ms: z.number().int().min(60_000).default(60 * 60 * 1000),\n});\n\nconst CaptureSchema = z.object({\n  transcript_paths: z.array(z.string()).default([]),\n  plan_dirs: z.array(z.string()).default([]),\n  ignore_plan_dirs_in_git: z.boolean().default(false),\n  artifact_extensions: z.array(z.string()).default(['.md']),\n  buffer_max_events: z.number().int().positive().default(500),\n});\n\n/** Provider config shape used in both task-level and phase-level overrides. */\nconst ProviderOverrideSchema = z.object({\n  type: z.enum(['anthropic', 'ollama', 'lmstudio']),\n  base_url: z.string().optional(),\n  model: z.string().optional(),\n  /** Context window size for local models (Ollama num_ctx, LM Studio context_length). */\n  context_length: z.number().int().positive().optional(),\n});\n\n/** Per-phase overrides within a task — keyed by phase name. */\nconst PhaseOverrideSchema = z.object({\n  provider: ProviderOverrideSchema.optional(),\n  model: z.string().optional(),\n  maxTurns: z.number().int().positive().optional(),\n});\n\n/** Per-task schedule override — partial, merges with YAML defaults. */\nconst ScheduleOverrideSchema = z.object({\n  enabled: z.boolean().optional(),\n  intervalSeconds: z.number().int().positive().optional(),\n  runIn: z.array(z.enum([...SCHEDULABLE_POWER_STATES])).optional(),\n  preCondition: z.enum(['has-unprocessed-batches', 'has-active-skills', 'has-approved-candidates']).optional(),\n}).optional();\n\n/** Per-task config override — stored in myco.yaml under agent.tasks. */\nconst TaskProviderOverrideSchema = z.object({\n  provider: ProviderOverrideSchema.optional(),\n  model: z.string().optional(),\n  maxTurns: z.number().int().positive().optional(),\n  timeoutSeconds: z.number().int().positive().optional(),\n  phases: z.record(z.string(), PhaseOverrideSchema).optional(),\n  schedule: ScheduleOverrideSchema,\n  /** Task-specific params — keys and types vary per task. */\n  params: z.record(z.string(), z.union([z.string(), z.number(), z.boolean()])).optional(),\n});\n\nconst ContextSchema = z.object({\n  /** Which digest tier to inject at session start. */\n  digest_tier: z.number().int().default(5000),\n  /** Enable semantic spore search on each user prompt. */\n  prompt_search: z.boolean().default(true),\n  /** Max spores to inject per prompt (0-10). */\n  prompt_max_spores: z.number().int().min(0).max(10).default(3),\n});\n\nconst AgentSchema = z.object({\n  /** Number of batches between event-driven summary triggers (0 to disable). */\n  summary_batch_interval: z.number().int().min(0).default(5),\n  /** Global toggle for PowerManager-scheduled agent tasks. */\n  scheduled_tasks_enabled: z.boolean().default(true),\n  /** Global toggle for event-driven agent tasks (title-summary). */\n  event_tasks_enabled: z.boolean().default(true),\n  /** Global default provider — applies to all tasks unless overridden per-task. */\n  provider: ProviderOverrideSchema.optional(),\n  /** Global default model — applies to all tasks unless overridden per-task. */\n  model: z.string().optional(),\n  /** Per-task overrides keyed by task name. */\n  tasks: z.record(z.string(), TaskProviderOverrideSchema).optional(),\n});\n\nconst BackupSchema = z.object({\n  /** Override directory for backup files. Supports ~ for home directory. When unset, defaults to .myco/backups. */\n  dir: z.string().optional(),\n});\n\nconst MaintenanceSchema = z.object({\n  /** Automatically run PRAGMA optimize on a schedule. */\n  auto_optimize: z.boolean().default(true),\n  /** How often to run auto-optimize, in hours (1–720). */\n  auto_optimize_interval_hours: z.number().int().min(1).max(720).default(24),\n});\n\nconst TeamSchema = z.object({\n  /** Whether team sync is enabled. */\n  enabled: z.boolean().default(false),\n  /** Cloudflare Worker URL for team sync. */\n  worker_url: z.string().url().optional(),\n  /** Team identifier for sync grouping. */\n  team_id: z.string().optional(),\n  /** Sync interval in minutes. */\n  interval_minutes: z.number().int().min(1).max(1440).default(15),\n});\n\nconst SkillsSchema = z.object({\n  /** Auto-generate candidates above this confidence score. */\n  confidence_threshold: z.number().min(0).max(1).default(0.7),\n  /** Flag unused skills after this many days. */\n  usage_stale_days: z.number().int().positive().default(30),\n});\n\nconst NotificationsSchema = z.object({\n  /** Master switch — disables all notifications when false. */\n  enabled: z.boolean().default(true),\n  /** Allow browser system notifications (Notification API). */\n  system_notifications: z.boolean().default(false),\n  /** Default display mode for new notification types. */\n  default_mode: z.enum(['banner', 'summary']).default('summary'),\n  /** Per-domain settings. Keys are domain names from the registry. */\n  domains: z.record(z.string(), z.object({\n    enabled: z.boolean().default(true),\n    /** Override display mode for this domain. Omit to use global default_mode. */\n    mode: z.enum(['banner', 'summary']).optional(),\n  })).default({}),\n});\n\nconst SymbiontEntrySchema = z.object({\n  enabled: z.boolean().default(true),\n});\n\nexport const MycoConfigSchema = z.preprocess(\n  (raw: unknown) => {\n    if (raw && typeof raw === 'object' && 'curation' in raw && !('agent' in raw)) {\n      const { curation, ...rest } = raw as Record<string, unknown>;\n      return { ...rest, agent: curation };\n    }\n    return raw;\n  },\n  z.object({\n    version: z.literal(3),\n    config_version: z.number().int().nonnegative().default(0),\n    embedding: EmbeddingProviderSchema.default(() => EmbeddingProviderSchema.parse({})),\n    daemon: DaemonSchema.default(() => DaemonSchema.parse({})),\n    capture: CaptureSchema.default(() => CaptureSchema.parse({})),\n    agent: AgentSchema.default(() => AgentSchema.parse({})),\n    context: ContextSchema.default(() => ContextSchema.parse({})),\n    backup: BackupSchema.default(() => BackupSchema.parse({})),\n    maintenance: MaintenanceSchema.default(() => MaintenanceSchema.parse({})),\n    team: TeamSchema.default(() => TeamSchema.parse({})),\n    skills: SkillsSchema.default(() => SkillsSchema.parse({})),\n    notifications: NotificationsSchema.default(() => NotificationsSchema.parse({})),\n    symbionts: z.record(z.string(), SymbiontEntrySchema).optional(),\n  }),\n);\n\nexport type MycoConfig = z.output<typeof MycoConfigSchema>;\nexport type EmbeddingProviderConfig = z.infer<typeof EmbeddingProviderSchema>;\nexport type TaskProviderOverride = z.infer<typeof TaskProviderOverrideSchema>;\nexport type PhaseOverride = z.infer<typeof PhaseOverrideSchema>;\nexport type ScheduleOverride = z.infer<typeof ScheduleOverrideSchema>;\nexport type ContextConfig = z.infer<typeof ContextSchema>;\nexport type BackupConfig = z.infer<typeof BackupSchema>;\nexport type TeamConfig = z.infer<typeof TeamSchema>;\nexport type SkillsConfig = z.infer<typeof SkillsSchema>;\nexport type NotificationsConfig = z.infer<typeof NotificationsSchema>;\nexport type SymbiontEntry = z.infer<typeof SymbiontEntrySchema>;\n","/**\n * Config and vault migrations — run once per version, tracked by config_version.\n *\n * Each migration has a version number, a name, and a function that receives\n * the raw parsed YAML doc and the vault directory. Migrations run in order\n * and are skipped if config_version is already past them.\n *\n * To add a new migration:\n * 1. Add an entry to MIGRATIONS with the next version number\n * 2. Write the migrate function — it receives the mutable doc and vaultDir\n * 3. The framework handles version tracking and writing the config back\n */\n\nimport fs from 'node:fs';\nimport path from 'node:path';\n\nexport interface Migration {\n  version: number;\n  name: string;\n  migrate: (doc: Record<string, unknown>, vaultDir: string) => void;\n}\n\n/** Regex matching both quoted and unquoted YAML: type: memory, type: \"memory\", type: 'memory' */\nconst MEMORY_TYPE_PATTERN = /type:\\s*[\"']?memory[\"']?/g;\n\nexport const MIGRATIONS: Migration[] = [\n  {\n    version: 1,\n    name: 'rename-memories-to-spores',\n    migrate: (doc, vaultDir) => {\n      // Config: rename context.layers.memories → context.layers.spores\n      const context = doc.context as Record<string, unknown> | undefined;\n      const layers = context?.layers as Record<string, unknown> | undefined;\n      if (layers && 'memories' in layers && !('spores' in layers)) {\n        layers.spores = layers.memories;\n        delete layers.memories;\n      }\n\n      // Vault: rename memories/ directory → spores/\n      const memoriesDir = path.join(vaultDir, 'memories');\n      const sporesDir = path.join(vaultDir, 'spores');\n\n      if (!fs.existsSync(memoriesDir)) return;\n\n      if (fs.existsSync(sporesDir)) {\n        // Both exist (interrupted migration) — merge remaining files\n        const moveRemaining = (srcDir: string, destDir: string): void => {\n          for (const entry of fs.readdirSync(srcDir, { withFileTypes: true })) {\n            const srcPath = path.join(srcDir, entry.name);\n            const destPath = path.join(destDir, entry.name);\n            if (entry.isDirectory()) {\n              if (!fs.existsSync(destPath)) fs.mkdirSync(destPath, { recursive: true });\n              moveRemaining(srcPath, destPath);\n            } else if (!fs.existsSync(destPath)) {\n              fs.renameSync(srcPath, destPath);\n            }\n          }\n        };\n        moveRemaining(memoriesDir, sporesDir);\n        fs.rmSync(memoriesDir, { recursive: true, force: true });\n      } else {\n        fs.renameSync(memoriesDir, sporesDir);\n      }\n\n      // Update frontmatter type: memory → type: spore (handles quoted and unquoted)\n      const walkUpdate = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkUpdate(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          MEMORY_TYPE_PATTERN.lastIndex = 0;\n          if (MEMORY_TYPE_PATTERN.test(content)) {\n            MEMORY_TYPE_PATTERN.lastIndex = 0;\n            fs.writeFileSync(fullPath, content.replace(MEMORY_TYPE_PATTERN, 'type: spore'));\n          }\n        }\n      };\n      walkUpdate(sporesDir);\n\n      // Legacy: update wikilink references in Markdown files (pre-SQLite migration): [[memories/...]] → [[spores/...]]\n      const walkLinks = (dir: string): void => {\n        for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n          const fullPath = path.join(dir, entry.name);\n          if (entry.isDirectory()) { walkLinks(fullPath); continue; }\n          if (!entry.name.endsWith('.md')) continue;\n          const content = fs.readFileSync(fullPath, 'utf-8');\n          if (content.includes('memories/')) {\n            fs.writeFileSync(fullPath, content.replace(/memories\\//g, 'spores/'));\n          }\n        }\n      };\n      walkLinks(vaultDir);\n    },\n  },\n  {\n    version: 2,\n    name: 'consolidation-boolean-to-object',\n    migrate: (doc) => {\n      const digest = doc.digest as Record<string, unknown> | undefined;\n      if (!digest) return;\n\n      const consolidation = digest.consolidation;\n      if (typeof consolidation === 'boolean') {\n        digest.consolidation = { enabled: consolidation, max_tokens: 2048 };\n      }\n    },\n  },\n  {\n    version: 3,\n    name: 'schedule-to-task-level',\n    migrate(doc: Record<string, unknown>, _vaultDir: string): void {\n      const agent = (doc.agent ?? {}) as Record<string, unknown>;\n      const skills = (doc.skills ?? {}) as Record<string, unknown>;\n      const tasks = ((agent.tasks ?? {}) as Record<string, Record<string, unknown>>);\n\n      /** Default interval for full-intelligence task (5 minutes). */\n      const DEFAULT_INTELLIGENCE_INTERVAL_SECONDS = 300;\n\n      const VALID_SCHEDULE_STATES = ['active', 'idle', 'sleep'] as const;\n\n      // Migrate agent.auto_run + interval_seconds → full-intelligence schedule\n      if ('auto_run' in agent || 'interval_seconds' in agent) {\n        const fiTask = tasks['full-intelligence'] ?? {};\n        fiTask.schedule = {\n          enabled: agent.auto_run ?? true,\n          intervalSeconds: agent.interval_seconds ?? DEFAULT_INTELLIGENCE_INTERVAL_SECONDS,\n        };\n        tasks['full-intelligence'] = fiTask;\n        delete agent.auto_run;\n        delete agent.interval_seconds;\n      }\n\n      // Migrate skills.auto_survey → skill-survey schedule\n      if ('auto_survey' in skills) {\n        const ssTask = tasks['skill-survey'] ?? {};\n        ssTask.schedule = {\n          enabled: skills.auto_survey ?? false,\n        };\n        tasks['skill-survey'] = ssTask;\n        delete skills.auto_survey;\n      }\n\n      // Migrate skills.auto_evolve + evolve_cadence → skill-evolve schedule\n      if ('auto_evolve' in skills || 'evolve_cadence' in skills) {\n        const seTask = tasks['skill-evolve'] ?? {};\n        const schedule: Record<string, unknown> = {\n          enabled: skills.auto_evolve ?? false,\n        };\n        if ('evolve_cadence' in skills) {\n          const cadence = String(skills.evolve_cadence);\n          schedule.runIn = VALID_SCHEDULE_STATES.includes(cadence as typeof VALID_SCHEDULE_STATES[number])\n            ? [cadence]\n            : ['idle']; // fallback to safe default\n        }\n        seTask.schedule = schedule;\n        tasks['skill-evolve'] = seTask;\n        delete skills.auto_evolve;\n        delete skills.evolve_cadence;\n      }\n\n      // Write back tasks if any were created\n      if (Object.keys(tasks).length > 0) {\n        agent.tasks = tasks;\n      }\n      doc.agent = agent;\n      doc.skills = skills;\n    },\n  },\n  {\n    version: 4,\n    name: 'rename-cloud-provider-to-anthropic',\n    migrate(doc: Record<string, unknown>, _vaultDir: string): void {\n      // Rename `provider.type: cloud` -> `provider.type: anthropic` everywhere\n      // it appears in the agent config: global default, per-task, per-phase.\n      const renameProvider = (provider: unknown): void => {\n        if (\n          provider &&\n          typeof provider === 'object' &&\n          (provider as Record<string, unknown>).type === 'cloud'\n        ) {\n          (provider as Record<string, unknown>).type = 'anthropic';\n        }\n      };\n\n      const agent = doc.agent as Record<string, unknown> | undefined;\n      if (!agent) return;\n\n      // Global default provider\n      renameProvider(agent.provider);\n\n      // Per-task overrides\n      const tasks = agent.tasks as Record<string, Record<string, unknown>> | undefined;\n      if (tasks) {\n        for (const taskConfig of Object.values(tasks)) {\n          renameProvider(taskConfig.provider);\n\n          // Per-phase overrides within a task\n          const phases = taskConfig.phases as Record<string, Record<string, unknown>> | undefined;\n          if (phases) {\n            for (const phaseConfig of Object.values(phases)) {\n              renameProvider(phaseConfig.provider);\n            }\n          }\n        }\n      }\n    },\n  },\n];\n\n/** Current migration version — the highest version in MIGRATIONS. */\nexport const CURRENT_MIGRATION_VERSION = MIGRATIONS[MIGRATIONS.length - 1]?.version ?? 0;\n\n/**\n * Run all pending migrations on the raw config doc.\n * Returns true if any migrations ran (caller should reindex).\n */\nexport function runMigrations(\n  doc: Record<string, unknown>,\n  vaultDir: string,\n  log?: (message: string) => void,\n): boolean {\n  const currentVersion = (doc.config_version as number) ?? 0;\n  let ran = false;\n\n  for (const migration of MIGRATIONS) {\n    if (migration.version <= currentVersion) continue;\n\n    migration.migrate(doc, vaultDir);\n    doc.config_version = migration.version;\n    ran = true;\n  }\n\n  if (ran) {\n    const from = currentVersion;\n    const to = (doc.config_version as number) ?? 0;\n    log?.(`Migrated config from v${from} to v${to}`);\n  }\n\n  return 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package/dist/{chunk-5OXBT5MD.js → chunk-P5VNHGVZ.js}

@@ -25,7 +25,7 @@ import {
 } from "./chunk-AULBWINA.js";
 import {
   loadConfig
-} from "./chunk-UTSCRMJE.js";
+} from "./chunk-NKQZ73LL.js";
 import {
   getDatabase
 } from "./chunk-MYX5NCRH.js";
@@ -145,7 +145,7 @@ function notify(vaultDir, payload, config) {
     const domainConfig = cfg.notifications.domains[payload.domain];
     if (domainConfig && !domainConfig.enabled) return null;
     const registeredType = getType(payload.type);
-    const mode = payload.mode ?? domainConfig?.mode ?? registeredType?.type.defaultMode ?? cfg.notifications.default_mode;
+    const mode = payload.mode ?? domainConfig?.mode ?? cfg.notifications.default_mode ?? registeredType?.type.defaultMode;
     const level = payload.level ?? registeredType?.type.defaultLevel ?? "info";
     const id = crypto.randomUUID();
     insertNotification({
@@ -2222,4 +2222,4 @@ export {
   buildTaskInstruction,
   isInstructionRequiredTask
 };
-//# sourceMappingURL=chunk-5OXBT5MD.js.map
+//# sourceMappingURL=chunk-P5VNHGVZ.js.map