@goondocks/myco 0.16.0 → 0.16.2

package/dist/{agent-run-S4MFWUSV.js → agent-run-MNU2QWHR.js}

@@ -1,13 +1,13 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   connectToDaemon
-} from "./chunk-OH334Y3J.js";
+} from "./chunk-BNAYBGPH.js";
 import "./chunk-SAKJMNSR.js";
 import "./chunk-TIAYBVSI.js";
 import "./chunk-VWXDSDJU.js";
 import "./chunk-MYX5NCRH.js";
-import "./chunk-G6LM45FD.js";
-import "./chunk-U255A3RE.js";
+import "./chunk-RJRRHTAA.js";
+import "./chunk-2E7YGLLN.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-34NHDRWI.js";
 import "./chunk-E7NUADTQ.js";
@@ -32,4 +32,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=agent-run-S4MFWUSV.js.map
+//# sourceMappingURL=agent-run-MNU2QWHR.js.map

package/dist/{agent-tasks-JZ77AZSK.js → agent-tasks-NCRKUU6E.js}

@@ -1,13 +1,13 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   connectToDaemon
-} from "./chunk-OH334Y3J.js";
+} from "./chunk-BNAYBGPH.js";
 import "./chunk-SAKJMNSR.js";
 import "./chunk-TIAYBVSI.js";
 import "./chunk-VWXDSDJU.js";
 import "./chunk-MYX5NCRH.js";
-import "./chunk-G6LM45FD.js";
-import "./chunk-U255A3RE.js";
+import "./chunk-RJRRHTAA.js";
+import "./chunk-2E7YGLLN.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-34NHDRWI.js";
 import "./chunk-E7NUADTQ.js";
@@ -178,4 +178,4 @@ async function run(args, vaultDir) {
 export {
   run
 };
-//# sourceMappingURL=agent-tasks-JZ77AZSK.js.map
+//# sourceMappingURL=agent-tasks-NCRKUU6E.js.map

package/dist/{chunk-U255A3RE.js → chunk-2E7YGLLN.js}

@@ -11,7 +11,7 @@ var cached;
 function getPluginVersion() {
   if (cached) return cached;
   if (true) {
-    cached = "0.16.0";
+    cached = "0.16.2";
     return cached;
   }
   const root = findPackageRoot(path.dirname(fileURLToPath(import.meta.url)));
@@ -32,4 +32,4 @@ function getPluginVersion() {
 export {
   getPluginVersion
 };
-//# sourceMappingURL=chunk-U255A3RE.js.map
+//# sourceMappingURL=chunk-2E7YGLLN.js.map

package/dist/{chunk-VEQLNB7E.js → chunk-4U6X35TH.js}

@@ -11,7 +11,7 @@ import {
 } from "./chunk-5ZT2Q6P5.js";
 import {
   DaemonClient
-} from "./chunk-G6LM45FD.js";
+} from "./chunk-RJRRHTAA.js";
 
 // src/hooks/send-event.ts
 import fs from "fs";
@@ -39,4 +39,4 @@ async function sendEvent(hookName, buildEvent) {
 export {
   sendEvent
 };
-//# sourceMappingURL=chunk-VEQLNB7E.js.map
+//# sourceMappingURL=chunk-4U6X35TH.js.map

package/dist/{chunk-OH334Y3J.js → chunk-BNAYBGPH.js}

@@ -13,7 +13,7 @@ import {
 } from "./chunk-MYX5NCRH.js";
 import {
   DaemonClient
-} from "./chunk-G6LM45FD.js";
+} from "./chunk-RJRRHTAA.js";
 
 // src/cli/shared.ts
 import fs from "fs";
@@ -109,4 +109,4 @@ export {
   VAULT_GITIGNORE,
   registerSymbionts
 };
-//# sourceMappingURL=chunk-OH334Y3J.js.map
+//# sourceMappingURL=chunk-BNAYBGPH.js.map

package/dist/{chunk-KYSLNB3C.js → chunk-D63XTGBV.js}

@@ -5,7 +5,7 @@ import {
 } from "./chunk-IRSNOBGD.js";
 import {
   getSession
-} from "./chunk-WKAYMCPR.js";
+} from "./chunk-SGYYOTNM.js";
 import {
   getTeamMachineId,
   syncRow
@@ -1579,4 +1579,4 @@ export {
   insertReport,
   listReports
 };
-//# sourceMappingURL=chunk-KYSLNB3C.js.map
+//# sourceMappingURL=chunk-D63XTGBV.js.map

package/dist/{chunk-G6LM45FD.js → chunk-RJRRHTAA.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   getPluginVersion
-} from "./chunk-U255A3RE.js";
+} from "./chunk-2E7YGLLN.js";
 import {
   DAEMON_CLIENT_TIMEOUT_MS,
   DAEMON_HEALTH_CHECK_TIMEOUT_MS,
@@ -185,4 +185,4 @@ export {
   resolveCliEntryPath,
   DaemonClient
 };
-//# sourceMappingURL=chunk-G6LM45FD.js.map
+//# sourceMappingURL=chunk-RJRRHTAA.js.map

package/dist/{chunk-WKAYMCPR.js → chunk-SGYYOTNM.js}

@@ -262,10 +262,16 @@ function deleteSessionCascade(sessionId) {
   const result = db.transaction(() => {
     db.prepare(`DELETE FROM activities WHERE session_id = ?`).run(sessionId);
     const attachments = db.prepare(`DELETE FROM attachments WHERE session_id = ?`).run(sessionId);
-    const prompts = db.prepare(`DELETE FROM prompt_batches WHERE session_id = ?`).run(sessionId);
-    const resEvents = db.prepare(`DELETE FROM resolution_events WHERE session_id = ?`).run(sessionId);
+    db.prepare(`DELETE FROM plans WHERE session_id = ?`).run(sessionId);
+    db.prepare(`DELETE FROM skill_usage WHERE session_id = ?`).run(sessionId);
+    const resEvents = db.prepare(
+      `DELETE FROM resolution_events
+       WHERE session_id = ?
+          OR spore_id IN (SELECT id FROM spores WHERE session_id = ?)`
+    ).run(sessionId, sessionId);
     const edges = db.prepare(`DELETE FROM graph_edges WHERE session_id = ?`).run(sessionId);
     const spores = db.prepare(`DELETE FROM spores WHERE session_id = ?`).run(sessionId);
+    const prompts = db.prepare(`DELETE FROM prompt_batches WHERE session_id = ?`).run(sessionId);
     const session = db.prepare(`DELETE FROM sessions WHERE id = ?`).run(sessionId);
     return {
       deleted: session.changes > 0,
@@ -296,4 +302,4 @@ export {
   getSessionImpact,
   deleteSessionCascade
 };
-//# sourceMappingURL=chunk-WKAYMCPR.js.map
+//# sourceMappingURL=chunk-SGYYOTNM.js.map

package/dist/{chunk-WKAYMCPR.js.map → chunk-SGYYOTNM.js.map}

@@ -1 +1 @@
-{"version":3,"sources":["../src/db/queries/sessions.ts"],"sourcesContent":["/**\n * Session CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\nimport { getTeamMachineId } from '@myco/daemon/team-context.js';\nimport { syncRow } from '@myco/db/queries/team-outbox.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of sessions returned by listSessions when no limit given. */\nconst DEFAULT_LIST_LIMIT = 100;\n\n/** Session status value when a session is closed normally. */\nconst STATUS_COMPLETED = 'completed';\n\n/** Default session status for new sessions. */\nconst DEFAULT_STATUS = 'active';\n\n/** Default prompt count for new sessions. */\nconst DEFAULT_PROMPT_COUNT = 0;\n\n/** Default tool count for new sessions. */\nconst DEFAULT_TOOL_COUNT = 0;\n\n/** Default processed flag for new sessions. */\nconst DEFAULT_PROCESSED = 0;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting/upserting a session. */\nexport interface SessionInsert {\n  id: string;\n  agent: string;\n  started_at: number;\n  created_at: number;\n  user?: string | null;\n  project_root?: string | null;\n  branch?: string | null;\n  ended_at?: number | null;\n  status?: string;\n  prompt_count?: number;\n  tool_count?: number;\n  title?: string | null;\n  summary?: string | null;\n  transcript_path?: string | null;\n  parent_session_id?: string | null;\n  parent_session_reason?: string | null;\n  processed?: number;\n  content_hash?: string | null;\n  machine_id?: string;\n}\n\n/** Row shape returned from session queries (all columns). */\nexport interface SessionRow {\n  id: string;\n  agent: string;\n  user: string | null;\n  project_root: string | null;\n  branch: string | null;\n  started_at: number;\n  ended_at: number | null;\n  status: string;\n  prompt_count: number;\n  tool_count: number;\n  title: string | null;\n  summary: string | null;\n  transcript_path: string | null;\n  parent_session_id: string | null;\n  parent_session_reason: string | null;\n  processed: number;\n  content_hash: string | null;\n  embedded: number;\n  created_at: number;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n/** Updatable fields for `updateSession`. */\nexport interface SessionUpdate {\n  agent?: string;\n  user?: string | null;\n  project_root?: string | null;\n  branch?: string | null;\n  ended_at?: number | null;\n  status?: string;\n  prompt_count?: number;\n  tool_count?: number;\n  title?: string | null;\n  summary?: string | null;\n  transcript_path?: string | null;\n  parent_session_id?: string | null;\n  parent_session_reason?: string | null;\n  processed?: number;\n  content_hash?: string | null;\n}\n\n/** Filter options for `listSessions`. */\nexport interface ListSessionsOptions {\n  limit?: number;\n  offset?: number;\n  status?: string;\n  agent?: string;\n  search?: string;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst SESSION_COLUMNS = [\n  'id',\n  'agent',\n  '\"user\"',\n  'project_root',\n  'branch',\n  'started_at',\n  'ended_at',\n  'status',\n  'prompt_count',\n  'tool_count',\n  'title',\n  'summary',\n  'transcript_path',\n  'parent_session_id',\n  'parent_session_reason',\n  'processed',\n  'content_hash',\n  'embedded',\n  'created_at',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = SESSION_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/**\n * Normalize a SQLite result row into a typed SessionRow.\n *\n * The quoted \"user\" column comes back as `user` in the result object.\n */\nfunction toSessionRow(row: Record<string, unknown>): SessionRow {\n  return {\n    id: row.id as string,\n    agent: row.agent as string,\n    user: (row.user as string) ?? null,\n    project_root: (row.project_root as string) ?? null,\n    branch: (row.branch as string) ?? null,\n    started_at: row.started_at as number,\n    ended_at: (row.ended_at as number) ?? null,\n    status: row.status as string,\n    prompt_count: row.prompt_count as number,\n    tool_count: row.tool_count as number,\n    title: (row.title as string) ?? null,\n    summary: (row.summary as string) ?? null,\n    transcript_path: (row.transcript_path as string) ?? null,\n    parent_session_id: (row.parent_session_id as string) ?? null,\n    parent_session_reason: (row.parent_session_reason as string) ?? null,\n    processed: row.processed as number,\n    content_hash: (row.content_hash as string) ?? null,\n    embedded: (row.embedded as number) ?? 0,\n    created_at: row.created_at as number,\n    machine_id: (row.machine_id as string) ?? 'local',\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a session or update it if the id already exists.\n *\n * On conflict the row is updated with the values from `data`, preserving\n * any columns not supplied via COALESCE with EXCLUDED values.\n */\nexport function upsertSession(data: SessionInsert): SessionRow {\n  const db = getDatabase();\n\n  db.prepare(\n    `INSERT INTO sessions (\n       id, agent, \"user\", project_root, branch,\n       started_at, ended_at, status, prompt_count, tool_count,\n       title, summary, transcript_path,\n       parent_session_id, parent_session_reason,\n       processed, content_hash, created_at, machine_id\n     ) VALUES (\n       ?, ?, ?, ?, ?,\n       ?, ?, ?, ?, ?,\n       ?, ?, ?,\n       ?, ?,\n       ?, ?, ?, ?\n     )\n     ON CONFLICT (id) DO UPDATE SET\n       agent                 = EXCLUDED.agent,\n       \"user\"                = EXCLUDED.\"user\",\n       project_root          = EXCLUDED.project_root,\n       branch                = EXCLUDED.branch,\n       started_at            = EXCLUDED.started_at,\n       ended_at              = COALESCE(EXCLUDED.ended_at, sessions.ended_at),\n       status                = COALESCE(EXCLUDED.status, sessions.status),\n       prompt_count          = CASE WHEN ? THEN EXCLUDED.prompt_count ELSE sessions.prompt_count END,\n       tool_count            = CASE WHEN ? THEN EXCLUDED.tool_count ELSE sessions.tool_count END,\n       title                 = COALESCE(EXCLUDED.title, sessions.title),\n       summary               = COALESCE(EXCLUDED.summary, sessions.summary),\n       transcript_path       = COALESCE(EXCLUDED.transcript_path, sessions.transcript_path),\n       parent_session_id     = EXCLUDED.parent_session_id,\n       parent_session_reason = EXCLUDED.parent_session_reason,\n       processed             = COALESCE(EXCLUDED.processed, sessions.processed),\n       content_hash          = EXCLUDED.content_hash`,\n  ).run(\n    data.id,\n    data.agent,\n    data.user ?? null,\n    data.project_root ?? null,\n    data.branch ?? null,\n    data.started_at,\n    data.ended_at ?? null,\n    data.status ?? DEFAULT_STATUS,\n    data.prompt_count ?? DEFAULT_PROMPT_COUNT,\n    data.tool_count ?? DEFAULT_TOOL_COUNT,\n    data.title ?? null,\n    data.summary ?? null,\n    data.transcript_path ?? null,\n    data.parent_session_id ?? null,\n    data.parent_session_reason ?? null,\n    data.processed ?? DEFAULT_PROCESSED,\n    data.content_hash ?? null,\n    data.created_at,\n    data.machine_id ?? getTeamMachineId(),\n    data.prompt_count !== undefined ? 1 : 0,\n    data.tool_count !== undefined ? 1 : 0,\n  );\n\n  const row = toSessionRow(\n    db.prepare(`SELECT ${SELECT_COLUMNS} FROM sessions WHERE id = ?`).get(data.id) as Record<string, unknown>,\n  );\n\n  syncRow('sessions', row);\n\n  return row;\n}\n\n/**\n * Retrieve a single session by id.\n *\n * @returns the session row, or null if not found.\n */\nexport function getSession(id: string): SessionRow | null {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT ${SELECT_COLUMNS} FROM sessions WHERE id = ?`,\n  ).get(id) as Record<string, unknown> | undefined;\n\n  if (!row) return null;\n  return toSessionRow(row);\n}\n\n/** Build WHERE clause and bound params from session filter options. */\nfunction buildSessionsWhere(\n  options: Omit<ListSessionsOptions, 'limit' | 'offset'>,\n): { where: string; params: unknown[] } {\n  const conditions: string[] = [];\n  const params: unknown[] = [];\n\n  if (options.status !== undefined) {\n    conditions.push(`status = ?`);\n    params.push(options.status);\n  }\n\n  if (options.agent !== undefined) {\n    conditions.push(`agent = ?`);\n    params.push(options.agent);\n  }\n\n  if (options.search !== undefined && options.search.length > 0) {\n    conditions.push(`(title LIKE ? OR id LIKE ?)`);\n    const pattern = `%${options.search}%`;\n    params.push(pattern, pattern);\n  }\n\n  return {\n    where: conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '',\n    params,\n  };\n}\n\n/**\n * List sessions with optional filters, ordered by created_at DESC.\n */\nexport function listSessions(\n  options: ListSessionsOptions = {},\n): SessionRow[] {\n  const db = getDatabase();\n  const { where, params } = buildSessionsWhere(options);\n  const limit = options.limit ?? DEFAULT_LIST_LIMIT;\n  const offset = options.offset ?? 0;\n\n  const rows = db.prepare(\n    `SELECT ${SELECT_COLUMNS}\n     FROM sessions\n     ${where}\n     ORDER BY created_at DESC\n     LIMIT ?\n     OFFSET ?`,\n  ).all(...params, limit, offset) as Record<string, unknown>[];\n\n  return rows.map(toSessionRow);\n}\n\n/**\n * Count sessions matching optional filters (for pagination totals).\n */\nexport function countSessions(\n  options: Omit<ListSessionsOptions, 'limit' | 'offset'> = {},\n): number {\n  const db = getDatabase();\n  const { where, params } = buildSessionsWhere(options);\n\n  const row = db.prepare(\n    `SELECT COUNT(*) as count FROM sessions ${where}`,\n  ).get(...params) as { count: number };\n\n  return row.count;\n}\n\n/**\n * Update specific fields on an existing session.\n *\n * @returns the updated row, or null if the session does not exist.\n */\nexport function updateSession(\n  id: string,\n  updates: SessionUpdate,\n): SessionRow | null {\n  const db = getDatabase();\n\n  const setClauses: string[] = [];\n  const params: unknown[] = [];\n\n  const fieldMap: Record<string, string> = {\n    agent: 'agent',\n    user: '\"user\"',\n    project_root: 'project_root',\n    branch: 'branch',\n    ended_at: 'ended_at',\n    status: 'status',\n    prompt_count: 'prompt_count',\n    tool_count: 'tool_count',\n    title: 'title',\n    summary: 'summary',\n    transcript_path: 'transcript_path',\n    parent_session_id: 'parent_session_id',\n    parent_session_reason: 'parent_session_reason',\n    processed: 'processed',\n    content_hash: 'content_hash',\n  };\n\n  for (const [key, column] of Object.entries(fieldMap)) {\n    if (key in updates) {\n      setClauses.push(`${column} = ?`);\n      params.push((updates as Record<string, unknown>)[key] ?? null);\n    }\n  }\n\n  if (setClauses.length === 0) return getSession(id);\n\n  params.push(id);\n\n  db.prepare(\n    `UPDATE sessions\n     SET ${setClauses.join(', ')}\n     WHERE id = ?`,\n  ).run(...params);\n\n  const updated = getSession(id);\n\n  if (updated) syncRow('sessions', updated);\n\n  return updated;\n}\n\n/**\n * Atomically increment tool_count for a session.\n *\n * Uses SQL `tool_count + 1` to avoid read-modify-write races.\n */\nexport function incrementSessionToolCount(id: string): void {\n  const db = getDatabase();\n  db.prepare(\n    `UPDATE sessions SET tool_count = COALESCE(tool_count, 0) + 1 WHERE id = ?`,\n  ).run(id);\n}\n\n/**\n * Close a session — set status to 'completed' and record the end time.\n *\n * @returns the updated row, or null if the session does not exist.\n */\nexport function closeSession(\n  id: string,\n  endedAt: number,\n): SessionRow | null {\n  const db = getDatabase();\n\n  db.prepare(\n    `UPDATE sessions\n     SET status = ?, ended_at = ?\n     WHERE id = ?`,\n  ).run(STATUS_COMPLETED, endedAt, id);\n\n  const closed = getSession(id);\n\n  if (closed) syncRow('sessions', closed);\n\n  return closed;\n}\n\n/**\n * Delete a session and all its child rows (batches, activities, attachments).\n *\n * No ON DELETE CASCADE in the schema, so we delete children first.\n * Returns true if the session existed and was deleted.\n */\nexport function deleteSession(id: string): boolean {\n  const db = getDatabase();\n\n  db.prepare(`DELETE FROM activities WHERE session_id = ?`).run(id);\n  db.prepare(`DELETE FROM attachments WHERE session_id = ?`).run(id);\n  db.prepare(`DELETE FROM prompt_batches WHERE session_id = ?`).run(id);\n  const info = db.prepare(`DELETE FROM sessions WHERE id = ?`).run(id);\n\n  return info.changes > 0;\n}\n\n// ---------------------------------------------------------------------------\n// Cascade delete + impact query\n// ---------------------------------------------------------------------------\n\n/** Counts of related data that would be affected by a session delete. */\nexport interface SessionImpact {\n  promptCount: number;\n  sporeCount: number;\n  attachmentCount: number;\n  graphEdgeCount: number;\n}\n\n/** Result of a cascade delete operation. */\nexport interface DeleteCascadeResult {\n  deleted: boolean;\n  counts: {\n    prompts: number;\n    spores: number;\n    attachments: number;\n    graphEdges: number;\n    resolutionEvents: number;\n  };\n  /** Spore IDs that were deleted (needed for vault file + vector cleanup). */\n  deletedSporeIds: string[];\n  /** Attachment file paths that were deleted from DB (needed for disk cleanup). */\n  deletedAttachmentPaths: string[];\n}\n\n/**\n * Get counts of all data related to a session, for pre-delete impact display.\n */\nexport function getSessionImpact(sessionId: string): SessionImpact {\n  const db = getDatabase();\n\n  const row = db.prepare(\n    `SELECT\n       (SELECT COUNT(*) FROM prompt_batches WHERE session_id = ?) AS promptCount,\n       (SELECT COUNT(*) FROM spores WHERE session_id = ?) AS sporeCount,\n       (SELECT COUNT(*) FROM attachments WHERE session_id = ?) AS attachmentCount,\n       (SELECT COUNT(*) FROM graph_edges WHERE session_id = ?) AS graphEdgeCount`,\n  ).get(sessionId, sessionId, sessionId, sessionId) as SessionImpact;\n\n  return row;\n}\n\n/**\n * Delete a session and ALL related data in a single transaction.\n *\n * Returns counts of deleted rows and IDs needed for post-transaction\n * cleanup (vault files, embedding vectors).\n */\nexport function deleteSessionCascade(sessionId: string): DeleteCascadeResult {\n  const db = getDatabase();\n\n  const zeroCounts: DeleteCascadeResult = {\n    deleted: false,\n    counts: { prompts: 0, spores: 0, attachments: 0, graphEdges: 0, resolutionEvents: 0 },\n    deletedSporeIds: [],\n    deletedAttachmentPaths: [],\n  };\n\n  // Check session exists first\n  const exists = db.prepare(`SELECT id FROM sessions WHERE id = ?`).get(sessionId);\n  if (!exists) return zeroCounts;\n\n  // Collect IDs/paths needed for post-transaction cleanup before deleting\n  const sporeIds = (db.prepare(\n    `SELECT id FROM spores WHERE session_id = ?`,\n  ).all(sessionId) as { id: string }[]).map((r) => r.id);\n\n  const attachmentPaths = (db.prepare(\n    `SELECT file_path FROM attachments WHERE session_id = ?`,\n  ).all(sessionId) as { file_path: string }[]).map((r) => r.file_path);\n\n  // Run all deletes in a single transaction\n  const result = db.transaction(() => {\n    db.prepare(`DELETE FROM activities WHERE session_id = ?`).run(sessionId);\n    const attachments = db.prepare(`DELETE FROM attachments WHERE session_id = ?`).run(sessionId);\n    const prompts = db.prepare(`DELETE FROM prompt_batches WHERE session_id = ?`).run(sessionId);\n    const resEvents = db.prepare(`DELETE FROM resolution_events WHERE session_id = ?`).run(sessionId);\n    const edges = db.prepare(`DELETE FROM graph_edges WHERE session_id = ?`).run(sessionId);\n    const spores = db.prepare(`DELETE FROM spores WHERE session_id = ?`).run(sessionId);\n    const session = db.prepare(`DELETE FROM sessions WHERE id = ?`).run(sessionId);\n\n    return {\n      deleted: session.changes > 0,\n      counts: {\n        prompts: prompts.changes,\n        spores: spores.changes,\n        attachments: attachments.changes,\n        graphEdges: edges.changes,\n        resolutionEvents: resEvents.changes,\n      },\n    };\n  })();\n\n  return {\n    ...result,\n    deletedSporeIds: sporeIds,\n    deletedAttachmentPaths: attachmentPaths,\n  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+{"version":3,"sources":["../src/db/queries/sessions.ts"],"sourcesContent":["/**\n * Session CRUD query helpers.\n *\n * All functions obtain the SQLite instance internally via `getDatabase()`.\n * Queries use positional `?` placeholders throughout (better-sqlite3).\n */\n\nimport { getDatabase } from '@myco/db/client.js';\nimport { getTeamMachineId } from '@myco/daemon/team-context.js';\nimport { syncRow } from '@myco/db/queries/team-outbox.js';\n\n// ---------------------------------------------------------------------------\n// Constants\n// ---------------------------------------------------------------------------\n\n/** Default number of sessions returned by listSessions when no limit given. */\nconst DEFAULT_LIST_LIMIT = 100;\n\n/** Session status value when a session is closed normally. */\nconst STATUS_COMPLETED = 'completed';\n\n/** Default session status for new sessions. */\nconst DEFAULT_STATUS = 'active';\n\n/** Default prompt count for new sessions. */\nconst DEFAULT_PROMPT_COUNT = 0;\n\n/** Default tool count for new sessions. */\nconst DEFAULT_TOOL_COUNT = 0;\n\n/** Default processed flag for new sessions. */\nconst DEFAULT_PROCESSED = 0;\n\n// ---------------------------------------------------------------------------\n// Types\n// ---------------------------------------------------------------------------\n\n/** Fields required (or optional) when inserting/upserting a session. */\nexport interface SessionInsert {\n  id: string;\n  agent: string;\n  started_at: number;\n  created_at: number;\n  user?: string | null;\n  project_root?: string | null;\n  branch?: string | null;\n  ended_at?: number | null;\n  status?: string;\n  prompt_count?: number;\n  tool_count?: number;\n  title?: string | null;\n  summary?: string | null;\n  transcript_path?: string | null;\n  parent_session_id?: string | null;\n  parent_session_reason?: string | null;\n  processed?: number;\n  content_hash?: string | null;\n  machine_id?: string;\n}\n\n/** Row shape returned from session queries (all columns). */\nexport interface SessionRow {\n  id: string;\n  agent: string;\n  user: string | null;\n  project_root: string | null;\n  branch: string | null;\n  started_at: number;\n  ended_at: number | null;\n  status: string;\n  prompt_count: number;\n  tool_count: number;\n  title: string | null;\n  summary: string | null;\n  transcript_path: string | null;\n  parent_session_id: string | null;\n  parent_session_reason: string | null;\n  processed: number;\n  content_hash: string | null;\n  embedded: number;\n  created_at: number;\n  machine_id: string;\n  synced_at: number | null;\n}\n\n/** Updatable fields for `updateSession`. */\nexport interface SessionUpdate {\n  agent?: string;\n  user?: string | null;\n  project_root?: string | null;\n  branch?: string | null;\n  ended_at?: number | null;\n  status?: string;\n  prompt_count?: number;\n  tool_count?: number;\n  title?: string | null;\n  summary?: string | null;\n  transcript_path?: string | null;\n  parent_session_id?: string | null;\n  parent_session_reason?: string | null;\n  processed?: number;\n  content_hash?: string | null;\n}\n\n/** Filter options for `listSessions`. */\nexport interface ListSessionsOptions {\n  limit?: number;\n  offset?: number;\n  status?: string;\n  agent?: string;\n  search?: string;\n}\n\n// ---------------------------------------------------------------------------\n// Column list\n// ---------------------------------------------------------------------------\n\nconst SESSION_COLUMNS = [\n  'id',\n  'agent',\n  '\"user\"',\n  'project_root',\n  'branch',\n  'started_at',\n  'ended_at',\n  'status',\n  'prompt_count',\n  'tool_count',\n  'title',\n  'summary',\n  'transcript_path',\n  'parent_session_id',\n  'parent_session_reason',\n  'processed',\n  'content_hash',\n  'embedded',\n  'created_at',\n  'machine_id',\n  'synced_at',\n] as const;\n\nconst SELECT_COLUMNS = SESSION_COLUMNS.join(', ');\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\n/**\n * Normalize a SQLite result row into a typed SessionRow.\n *\n * The quoted \"user\" column comes back as `user` in the result object.\n */\nfunction toSessionRow(row: Record<string, unknown>): SessionRow {\n  return {\n    id: row.id as string,\n    agent: row.agent as string,\n    user: (row.user as string) ?? null,\n    project_root: (row.project_root as string) ?? null,\n    branch: (row.branch as string) ?? null,\n    started_at: row.started_at as number,\n    ended_at: (row.ended_at as number) ?? null,\n    status: row.status as string,\n    prompt_count: row.prompt_count as number,\n    tool_count: row.tool_count as number,\n    title: (row.title as string) ?? null,\n    summary: (row.summary as string) ?? null,\n    transcript_path: (row.transcript_path as string) ?? null,\n    parent_session_id: (row.parent_session_id as string) ?? null,\n    parent_session_reason: (row.parent_session_reason as string) ?? null,\n    processed: row.processed as number,\n    content_hash: (row.content_hash as string) ?? null,\n    embedded: (row.embedded as number) ?? 0,\n    created_at: row.created_at as number,\n    machine_id: (row.machine_id as string) ?? 'local',\n    synced_at: (row.synced_at as number) ?? null,\n  };\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Insert a session or update it if the id already exists.\n *\n * On conflict the row is updated with the values from `data`, preserving\n * any columns not supplied via COALESCE with EXCLUDED values.\n */\nexport function upsertSession(data: SessionInsert): SessionRow {\n  const db = getDatabase();\n\n  db.prepare(\n    `INSERT INTO sessions (\n       id, agent, \"user\", project_root, branch,\n       started_at, ended_at, status, prompt_count, tool_count,\n       title, summary, transcript_path,\n       parent_session_id, parent_session_reason,\n       processed, content_hash, created_at, machine_id\n     ) VALUES (\n       ?, ?, ?, ?, ?,\n       ?, ?, ?, ?, ?,\n       ?, ?, ?,\n       ?, ?,\n       ?, ?, ?, ?\n     )\n     ON CONFLICT (id) DO UPDATE SET\n       agent                 = EXCLUDED.agent,\n       \"user\"                = EXCLUDED.\"user\",\n       project_root          = EXCLUDED.project_root,\n       branch                = EXCLUDED.branch,\n       started_at            = EXCLUDED.started_at,\n       ended_at              = COALESCE(EXCLUDED.ended_at, sessions.ended_at),\n       status                = COALESCE(EXCLUDED.status, sessions.status),\n       prompt_count          = CASE WHEN ? THEN EXCLUDED.prompt_count ELSE sessions.prompt_count END,\n       tool_count            = CASE WHEN ? THEN EXCLUDED.tool_count ELSE sessions.tool_count END,\n       title                 = COALESCE(EXCLUDED.title, sessions.title),\n       summary               = COALESCE(EXCLUDED.summary, sessions.summary),\n       transcript_path       = COALESCE(EXCLUDED.transcript_path, sessions.transcript_path),\n       parent_session_id     = EXCLUDED.parent_session_id,\n       parent_session_reason = EXCLUDED.parent_session_reason,\n       processed             = COALESCE(EXCLUDED.processed, sessions.processed),\n       content_hash          = EXCLUDED.content_hash`,\n  ).run(\n    data.id,\n    data.agent,\n    data.user ?? null,\n    data.project_root ?? null,\n    data.branch ?? null,\n    data.started_at,\n    data.ended_at ?? null,\n    data.status ?? DEFAULT_STATUS,\n    data.prompt_count ?? DEFAULT_PROMPT_COUNT,\n    data.tool_count ?? DEFAULT_TOOL_COUNT,\n    data.title ?? null,\n    data.summary ?? null,\n    data.transcript_path ?? null,\n    data.parent_session_id ?? null,\n    data.parent_session_reason ?? null,\n    data.processed ?? 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AS promptCount,\n       (SELECT COUNT(*) FROM spores WHERE session_id = ?) AS sporeCount,\n       (SELECT COUNT(*) FROM attachments WHERE session_id = ?) AS attachmentCount,\n       (SELECT COUNT(*) FROM graph_edges WHERE session_id = ?) AS graphEdgeCount`,\n  ).get(sessionId, sessionId, sessionId, sessionId) as SessionImpact;\n\n  return row;\n}\n\n/**\n * Delete a session and ALL related data in a single transaction.\n *\n * Returns counts of deleted rows and IDs needed for post-transaction\n * cleanup (vault files, embedding vectors).\n */\nexport function deleteSessionCascade(sessionId: string): DeleteCascadeResult {\n  const db = getDatabase();\n\n  const zeroCounts: DeleteCascadeResult = {\n    deleted: false,\n    counts: { prompts: 0, spores: 0, attachments: 0, graphEdges: 0, resolutionEvents: 0 },\n    deletedSporeIds: [],\n    deletedAttachmentPaths: [],\n  };\n\n  // Check session exists first\n  const exists = db.prepare(`SELECT id FROM sessions WHERE id = ?`).get(sessionId);\n  if (!exists) return zeroCounts;\n\n  // Collect IDs/paths needed for post-transaction cleanup before deleting\n  const sporeIds = (db.prepare(\n    `SELECT id FROM spores WHERE session_id = ?`,\n  ).all(sessionId) as { id: string }[]).map((r) => r.id);\n\n  const attachmentPaths = (db.prepare(\n    `SELECT file_path FROM attachments WHERE session_id = ?`,\n  ).all(sessionId) as { file_path: string }[]).map((r) => r.file_path);\n\n  // Run all deletes in a single transaction.\n  //\n  // Order matters — foreign_keys = ON is set in client.ts, so every DELETE\n  // is checked immediately. Child rows must be removed before their parents:\n  //   - spores.prompt_batch_id     → prompt_batches(id)   [spores BEFORE prompt_batches]\n  //   - plans.prompt_batch_id      → prompt_batches(id)   [plans BEFORE prompt_batches]\n  //   - resolution_events.spore_id → spores(id)           [resolution_events BEFORE spores]\n  //   - skill_usage.session_id     → sessions(id) NOT NULL\n  //   - plans.session_id           → sessions(id)\n  // resolution_events can reference spores across sessions (e.g. a later\n  // session supersedes an earlier session's spore), so we match by either\n  // session_id OR spore_id-in-this-session to catch cross-session references.\n  const result = db.transaction(() => {\n    db.prepare(`DELETE FROM activities WHERE session_id = ?`).run(sessionId);\n    const attachments = db.prepare(`DELETE FROM attachments WHERE session_id = ?`).run(sessionId);\n    db.prepare(`DELETE FROM plans WHERE session_id = ?`).run(sessionId);\n    db.prepare(`DELETE FROM skill_usage WHERE session_id = ?`).run(sessionId);\n    const resEvents = db.prepare(\n      `DELETE FROM resolution_events\n       WHERE session_id = ?\n          OR spore_id IN (SELECT id FROM spores WHERE session_id = ?)`,\n    ).run(sessionId, sessionId);\n    const edges = db.prepare(`DELETE FROM graph_edges WHERE session_id = ?`).run(sessionId);\n    const spores = db.prepare(`DELETE FROM spores WHERE session_id = ?`).run(sessionId);\n    const prompts = db.prepare(`DELETE FROM prompt_batches WHERE session_id = ?`).run(sessionId);\n    const session = db.prepare(`DELETE FROM sessions WHERE id = ?`).run(sessionId);\n\n    return {\n      deleted: session.changes > 0,\n      counts: {\n        prompts: prompts.changes,\n        spores: spores.changes,\n        attachments: attachments.changes,\n        graphEdges: edges.changes,\n        resolutionEvents: resEvents.changes,\n      },\n    };\n  })();\n\n  return {\n    ...result,\n    deletedSporeIds: sporeIds,\n    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package/dist/{chunk-VQZPWCBH.js → chunk-ZMODJWI5.js}

@@ -1,7 +1,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   isProcessAlive
-} from "./chunk-OH334Y3J.js";
+} from "./chunk-BNAYBGPH.js";
 import {
   loadConfig
 } from "./chunk-XAXQ72L3.js";
@@ -184,4 +184,4 @@ export {
   getEmbeddingQueueDepth,
   gatherStats
 };
-//# sourceMappingURL=chunk-VQZPWCBH.js.map
+//# sourceMappingURL=chunk-ZMODJWI5.js.map

package/dist/{cli-U2FZT4GP.js → cli-RYYABF2X.js}

@@ -2,7 +2,7 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   loadEnv
-} from "./chunk-OH334Y3J.js";
+} from "./chunk-BNAYBGPH.js";
 import "./chunk-SAKJMNSR.js";
 import "./chunk-TIAYBVSI.js";
 import "./chunk-VWXDSDJU.js";
@@ -10,8 +10,8 @@ import "./chunk-MYX5NCRH.js";
 import {
   resolveVaultDir
 } from "./chunk-5ZT2Q6P5.js";
-import "./chunk-G6LM45FD.js";
-import "./chunk-U255A3RE.js";
+import "./chunk-RJRRHTAA.js";
+import "./chunk-2E7YGLLN.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-34NHDRWI.js";
 import "./chunk-E7NUADTQ.js";
@@ -55,29 +55,29 @@ async function main() {
     process.stdout.write(USAGE);
     return;
   }
-  if (cmd === "init") return (await import("./init-XVAONLZ7.js")).run(args);
+  if (cmd === "init") return (await import("./init-AEHAQFPK.js")).run(args);
   if (cmd === "detect-providers") return (await import("./detect-providers-R7QOB3H6.js")).run(args);
   if (cmd === "version" || cmd === "--version" || cmd === "-v") {
-    const { getPluginVersion } = await import("./version-2NJN3WW6.js");
+    const { getPluginVersion } = await import("./version-VS2EDHBG.js");
     console.log(getPluginVersion());
     return;
   }
-  if (cmd === "mcp") return (await import("./server-4MUFDPDP.js")).main();
+  if (cmd === "mcp") return (await import("./server-OFRKA6N7.js")).main();
   if (cmd === "hook") {
     const hookName = args[0];
     const HOOK_DISPATCH = {
-      "session-start": () => import("./session-start-UXLG36AZ.js"),
-      "session-end": () => import("./session-end-UJM3UODF.js"),
-      "stop": () => import("./stop-5WD22XAH.js"),
-      "user-prompt-submit": () => import("./user-prompt-submit-UOAIU3JW.js"),
-      "post-tool-use": () => import("./post-tool-use-5UIVOE7I.js"),
-      "post-tool-use-failure": () => import("./post-tool-use-failure-SR2523FX.js"),
-      "subagent-start": () => import("./subagent-start-AMCPECUD.js"),
-      "subagent-stop": () => import("./subagent-stop-4M4BUENR.js"),
-      "stop-failure": () => import("./stop-failure-FLFIOPJY.js"),
-      "task-completed": () => import("./task-completed-QJOEVDXZ.js"),
-      "pre-compact": () => import("./pre-compact-2G2UWGDZ.js"),
-      "post-compact": () => import("./post-compact-CCSP4ZRC.js")
+      "session-start": () => import("./session-start-OL2ICLED.js"),
+      "session-end": () => import("./session-end-5EIVRCPS.js"),
+      "stop": () => import("./stop-YUZNQBRQ.js"),
+      "user-prompt-submit": () => import("./user-prompt-submit-FSYEPW7W.js"),
+      "post-tool-use": () => import("./post-tool-use-B3KOEOIM.js"),
+      "post-tool-use-failure": () => import("./post-tool-use-failure-2I5ELTTN.js"),
+      "subagent-start": () => import("./subagent-start-GWJXAAH3.js"),
+      "subagent-stop": () => import("./subagent-stop-B44SMV2R.js"),
+      "stop-failure": () => import("./stop-failure-6WFAKH2U.js"),
+      "task-completed": () => import("./task-completed-GIUFSRTP.js"),
+      "pre-compact": () => import("./pre-compact-NOXNJ5EV.js"),
+      "post-compact": () => import("./post-compact-OAWEBEDK.js")
     };
     const loader = HOOK_DISPATCH[hookName];
     if (!loader) {
@@ -86,13 +86,13 @@ async function main() {
     }
     return (await loader()).main();
   }
-  if (cmd === "daemon") return (await import("./main-VAU5UPY7.js")).main();
+  if (cmd === "daemon") return (await import("./main-GAGOE6XB.js")).main();
   if (cmd === "doctor") {
     const vaultDir2 = resolveVaultDir();
-    return (await import("./doctor-OJW7SCDQ.js")).run(args, vaultDir2);
+    return (await import("./doctor-M4Q7VCDO.js")).run(args, vaultDir2);
   }
-  if (cmd === "update") return (await import("./update-F2LPJMUE.js")).run(args);
-  if (cmd === "remove") return (await import("./remove-L4HNBCSZ.js")).run(args);
+  if (cmd === "update") return (await import("./update-QPRTLGYU.js")).run(args);
+  if (cmd === "remove") return (await import("./remove-LX4G6KP7.js")).run(args);
   const vaultDir = resolveVaultDir();
   if (!fs.existsSync(path.join(vaultDir, "myco.yaml"))) {
     console.error(`No myco.yaml found in ${vaultDir}. Run 'myco init' first.`);
@@ -104,33 +104,33 @@ async function main() {
     case "verify":
       return (await import("./verify-ITBMLK67.js")).run(args, vaultDir);
     case "stats":
-      return (await import("./stats-AYRSUFHR.js")).run(args, vaultDir);
+      return (await import("./stats-U5FHDIR7.js")).run(args, vaultDir);
     case "search":
-      return (await import("./search-ECJ76TU3.js")).run(args, vaultDir);
+      return (await import("./search-Q6N3SHKP.js")).run(args, vaultDir);
     case "vectors":
-      return (await import("./search-ECJ76TU3.js")).runVectors(args, vaultDir);
+      return (await import("./search-Q6N3SHKP.js")).runVectors(args, vaultDir);
     case "session":
-      return (await import("./session-ZHYO3BBY.js")).run(args, vaultDir);
+      return (await import("./session-SKXJLJYH.js")).run(args, vaultDir);
     case "setup-llm":
-      return (await import("./setup-llm-NEN5XPNY.js")).run(args, vaultDir);
+      return (await import("./setup-llm-BRNQW7K2.js")).run(args, vaultDir);
     case "setup-digest":
       return (await import("./setup-digest-4KDSXAIV.js")).run(args, vaultDir);
     case "agent":
-      return (await import("./agent-run-S4MFWUSV.js")).run(args, vaultDir);
+      return (await import("./agent-run-MNU2QWHR.js")).run(args, vaultDir);
     case "task":
-      return (await import("./agent-tasks-JZ77AZSK.js")).run(args, vaultDir);
+      return (await import("./agent-tasks-NCRKUU6E.js")).run(args, vaultDir);
     case "team": {
       const sub = args[0];
-      if (sub === "init") return (await import("./team-FWEVWYIY.js")).teamInit(vaultDir);
-      if (sub === "upgrade") return (await import("./team-FWEVWYIY.js")).teamUpgrade(vaultDir);
+      if (sub === "init") return (await import("./team-3YI3UWB3.js")).teamInit(vaultDir);
+      if (sub === "upgrade") return (await import("./team-3YI3UWB3.js")).teamUpgrade(vaultDir);
       console.error("Usage: myco team <init|upgrade>");
       process.exit(1);
       break;
     }
     case "open":
-      return (await import("./open-ES2AOXL5.js")).run(args, vaultDir);
+      return (await import("./open-4QMAL32X.js")).run(args, vaultDir);
     case "restart":
-      return (await import("./restart-ZQ3QNRF4.js")).run(args, vaultDir);
+      return (await import("./restart-WSNBSALP.js")).run(args, vaultDir);
     case "logs":
       return (await import("./logs-TMKNLSJY.js")).run(args, vaultDir);
     default:
@@ -143,4 +143,4 @@ main().catch((err) => {
   console.error(`myco: ${err.message}`);
   process.exit(1);
 });
-//# sourceMappingURL=cli-U2FZT4GP.js.map
+//# sourceMappingURL=cli-RYYABF2X.js.map

package/dist/{client-MZL5SFQI.js → client-5VXKGNN2.js}

@@ -2,8 +2,8 @@ import { createRequire as __cr } from 'node:module'; const require = __cr(import
 import {
   DaemonClient,
   resolveCliEntryPath
-} from "./chunk-G6LM45FD.js";
-import "./chunk-U255A3RE.js";
+} from "./chunk-RJRRHTAA.js";
+import "./chunk-2E7YGLLN.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-34NHDRWI.js";
 import "./chunk-E7NUADTQ.js";
@@ -12,4 +12,4 @@ export {
   DaemonClient,
   resolveCliEntryPath
 };
-//# sourceMappingURL=client-MZL5SFQI.js.map
+//# sourceMappingURL=client-5VXKGNN2.js.map

package/dist/{doctor-OJW7SCDQ.js → doctor-M4Q7VCDO.js}

@@ -1,15 +1,15 @@
 import { createRequire as __cr } from 'node:module'; const require = __cr(import.meta.url);
 import {
   isProcessAlive
-} from "./chunk-OH334Y3J.js";
+} from "./chunk-BNAYBGPH.js";
 import "./chunk-SAKJMNSR.js";
 import {
   MYCO_MCP_SERVER_NAME
 } from "./chunk-TIAYBVSI.js";
 import "./chunk-VWXDSDJU.js";
 import "./chunk-MYX5NCRH.js";
-import "./chunk-G6LM45FD.js";
-import "./chunk-U255A3RE.js";
+import "./chunk-RJRRHTAA.js";
+import "./chunk-2E7YGLLN.js";
 import "./chunk-LPUQPDC2.js";
 import "./chunk-34NHDRWI.js";
 import "./chunk-E7NUADTQ.js";
@@ -270,4 +270,4 @@ export {
   run,
   runChecks
 };
-//# sourceMappingURL=doctor-OJW7SCDQ.js.map
+//# sourceMappingURL=doctor-M4Q7VCDO.js.map

package/dist/{executor-HP3Y64PD.js → executor-ULRFWJCH.js}

@@ -31,7 +31,7 @@ import {
   updateRunStatus,
   updateSkillRecord,
   upsertDigestExtract
-} from "./chunk-KYSLNB3C.js";
+} from "./chunk-D63XTGBV.js";
 import {
   fullTextSearch
 } from "./chunk-UILSK6DK.js";
@@ -70,7 +70,7 @@ import {
 import {
   listSessions,
   updateSession
-} from "./chunk-WKAYMCPR.js";
+} from "./chunk-SGYYOTNM.js";
 import "./chunk-4JVHWBZF.js";
 import {
   AGENT_SETTABLE_STATUSES,
@@ -87,7 +87,7 @@ import {
 } from "./chunk-MYX5NCRH.js";
 import {
   getPluginVersion
-} from "./chunk-U255A3RE.js";
+} from "./chunk-2E7YGLLN.js";
 import {
   findPackageRoot
 } from "./chunk-LPUQPDC2.js";
@@ -694,6 +694,14 @@ function parseAllowedTools(rawValue) {
   if (parts.some((p) => sentinels.has(p))) return null;
   return parts;
 }
+function stemToken(word) {
+  let w = word;
+  if (w.length > 5 && w.endsWith("ing")) w = w.slice(0, -3);
+  else if (w.length > 5 && w.endsWith("ed")) w = w.slice(0, -2);
+  if (w.length > 4 && w.endsWith("s")) w = w.slice(0, -1);
+  if (w.length > 4 && w.endsWith("e")) w = w.slice(0, -1);
+  return w;
+}
 function tokenSet(text) {
   const stopwords = /* @__PURE__ */ new Set([
     "the",
@@ -753,21 +761,34 @@ function tokenSet(text) {
     "makes"
   ]);
   return new Set(
-    text.toLowerCase().replace(/[^a-z0-9_\s]/g, " ").split(/\s+/).filter((w) => w.length >= 4 && !stopwords.has(w))
+    text.toLowerCase().replace(/[^a-z0-9_\s]/g, " ").split(/\s+/).filter((w) => w.length >= 4 && !stopwords.has(w)).map(stemToken)
   );
 }
+function intersectionSize(a, b) {
+  let count = 0;
+  for (const token of a) {
+    if (b.has(token)) count++;
+  }
+  return count;
+}
 function descriptionSimilarity(a, b) {
   const aTokens = tokenSet(a);
   const bTokens = tokenSet(b);
   if (aTokens.size === 0 || bTokens.size === 0) return 0;
-  let intersection = 0;
-  for (const token of aTokens) {
-    if (bTokens.has(token)) intersection++;
-  }
+  const intersection = intersectionSize(aTokens, bTokens);
   const union = aTokens.size + bTokens.size - intersection;
   return union === 0 ? 0 : intersection / union;
 }
+function topicOverlapSimilarity(a, b, minTokens = 3) {
+  const aTokens = tokenSet(a);
+  const bTokens = tokenSet(b);
+  if (aTokens.size < minTokens || bTokens.size < minTokens) return 0;
+  const intersection = intersectionSize(aTokens, bTokens);
+  const smaller = Math.min(aTokens.size, bTokens.size);
+  return smaller === 0 ? 0 : intersection / smaller;
+}
 var DESCRIPTION_DUPLICATE_THRESHOLD = 0.4;
+var TOPIC_OVERLAP_THRESHOLD = 0.6;
 function checkFrontmatterPreservation(existing, incoming) {
   const violations = [];
   for (const field of PROTECTED_FRONTMATTER_FIELDS) {
@@ -849,8 +870,13 @@ function createSkillTools(deps) {
   function findOverlappingCandidate(newTopic, existing) {
     let best = null;
     for (const candidate of existing) {
-      const score = descriptionSimilarity(newTopic, candidate.topic);
-      if (score >= DESCRIPTION_DUPLICATE_THRESHOLD && (!best || score > best.score)) {
+      const jaccard = descriptionSimilarity(newTopic, candidate.topic);
+      const overlap = topicOverlapSimilarity(newTopic, candidate.topic);
+      const hitsJaccard = jaccard >= DESCRIPTION_DUPLICATE_THRESHOLD;
+      const hitsOverlap = overlap >= TOPIC_OVERLAP_THRESHOLD;
+      if (!hitsJaccard && !hitsOverlap) continue;
+      const score = Math.max(jaccard, overlap);
+      if (!best || score > best.score) {
         best = { candidate, score };
       }
     }
@@ -2650,4 +2676,4 @@ export {
   computeWaves,
   runAgent
 };
-//# sourceMappingURL=executor-HP3Y64PD.js.map
+//# sourceMappingURL=executor-ULRFWJCH.js.map