@google/gemini-cli-core 0.24.0-preview.0 → 0.25.0-nightly.20260112.15891721a

package/dist/docs/cli/settings.md

@@ -18,45 +18,49 @@ Note: Workspace settings override user settings.
 Here is a list of all the available settings, grouped by category and ordered as
 they appear in the UI.
 
+<!-- SETTINGS-AUTOGEN:START -->
+
 ### General
 
-| UI Label                        | Setting                            | Description                                                                  | Default     |
-| ------------------------------- | ---------------------------------- | ---------------------------------------------------------------------------- | ----------- |
-| Preview Features (e.g., models) | `general.previewFeatures`          | Enable preview features (e.g., preview models).                              | `false`     |
-| Vim Mode                        | `general.vimMode`                  | Enable Vim keybindings.                                                      | `false`     |
-| Disable Auto Update             | `general.disableAutoUpdate`        | Disable automatic updates.                                                   | `false`     |
-| Enable Prompt Completion        | `general.enablePromptCompletion`   | Enable AI-powered prompt completion suggestions while typing.                | `false`     |
-| Debug Keystroke Logging         | `general.debugKeystrokeLogging`    | Enable debug logging of keystrokes to the console.                           | `false`     |
-| Session Retention               | `general.sessionRetention`         | Settings for automatic session cleanup. This feature is disabled by default. | `undefined` |
-| Enable Session Cleanup          | `general.sessionRetention.enabled` | Enable automatic session cleanup.                                            | `false`     |
+| UI Label                        | Setting                            | Description                                                   | Default |
+| ------------------------------- | ---------------------------------- | ------------------------------------------------------------- | ------- |
+| Preview Features (e.g., models) | `general.previewFeatures`          | Enable preview features (e.g., preview models).               | `false` |
+| Vim Mode                        | `general.vimMode`                  | Enable Vim keybindings                                        | `false` |
+| Disable Auto Update             | `general.disableAutoUpdate`        | Disable automatic updates                                     | `false` |
+| Enable Prompt Completion        | `general.enablePromptCompletion`   | Enable AI-powered prompt completion suggestions while typing. | `false` |
+| Debug Keystroke Logging         | `general.debugKeystrokeLogging`    | Enable debug logging of keystrokes to the console.            | `false` |
+| Enable Session Cleanup          | `general.sessionRetention.enabled` | Enable automatic session cleanup                              | `false` |
 
 ### Output
 
-| UI Label      | Setting         | Description                                            | Default |
-| ------------- | --------------- | ------------------------------------------------------ | ------- |
-| Output Format | `output.format` | The format of the CLI output. Can be `text` or `json`. | `text`  |
+| UI Label      | Setting         | Description                                            | Default  |
+| ------------- | --------------- | ------------------------------------------------------ | -------- |
+| Output Format | `output.format` | The format of the CLI output. Can be `text` or `json`. | `"text"` |
 
 ### UI
 
-| UI Label                       | Setting                                  | Description                                                          | Default |
-| ------------------------------ | ---------------------------------------- | -------------------------------------------------------------------- | ------- |
-| Hide Window Title              | `ui.hideWindowTitle`                     | Hide the window title bar.                                           | `false` |
-| Show Status in Title           | `ui.showStatusInTitle`                   | Show Gemini CLI status and thoughts in the terminal window title.    | `false` |
-| Hide Tips                      | `ui.hideTips`                            | Hide helpful tips in the UI.                                         | `false` |
-| Hide Banner                    | `ui.hideBanner`                          | Hide the application banner.                                         | `false` |
-| Hide Context Summary           | `ui.hideContextSummary`                  | Hide the context summary (GEMINI.md, MCP servers) above the input.   | `false` |
-| Hide CWD                       | `ui.footer.hideCWD`                      | Hide the current working directory path in the footer.               | `false` |
-| Hide Sandbox Status            | `ui.footer.hideSandboxStatus`            | Hide the sandbox status indicator in the footer.                     | `false` |
-| Hide Model Info                | `ui.footer.hideModelInfo`                | Hide the model name and context usage in the footer.                 | `false` |
-| Hide Context Window Percentage | `ui.footer.hideContextPercentage`        | Hides the context window remaining percentage.                       | `true`  |
-| Hide Footer                    | `ui.hideFooter`                          | Hide the footer from the UI.                                         | `false` |
-| Show Memory Usage              | `ui.showMemoryUsage`                     | Display memory usage information in the UI.                          | `false` |
-| Show Line Numbers              | `ui.showLineNumbers`                     | Show line numbers in the chat.                                       | `false` |
-| Show Citations                 | `ui.showCitations`                       | Show citations for generated text in the chat.                       | `false` |
-| Use Full Width                 | `ui.useFullWidth`                        | Use the entire width of the terminal for output.                     | `true`  |
-| Use Alternate Screen Buffer    | `ui.useAlternateBuffer`                  | Use an alternate screen buffer for the UI, preserving shell history. | `true`  |
-| Disable Loading Phrases        | `ui.accessibility.disableLoadingPhrases` | Disable loading phrases for accessibility.                           | `false` |
-| Screen Reader Mode             | `ui.accessibility.screenReader`          | Render output in plain-text to be more screen reader accessible.     | `false` |
+| UI Label                       | Setting                                  | Description                                                                                                                                                       | Default |
+| ------------------------------ | ---------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------- | ------- |
+| Hide Window Title              | `ui.hideWindowTitle`                     | Hide the window title bar                                                                                                                                         | `false` |
+| Show Status in Title           | `ui.showStatusInTitle`                   | Show Gemini CLI status and thoughts in the terminal window title                                                                                                  | `false` |
+| Show Home Directory Warning    | `ui.showHomeDirectoryWarning`            | Show a warning when running Gemini CLI in the home directory.                                                                                                     | `true`  |
+| Hide Tips                      | `ui.hideTips`                            | Hide helpful tips in the UI                                                                                                                                       | `false` |
+| Hide Banner                    | `ui.hideBanner`                          | Hide the application banner                                                                                                                                       | `false` |
+| Hide Context Summary           | `ui.hideContextSummary`                  | Hide the context summary (GEMINI.md, MCP servers) above the input.                                                                                                | `false` |
+| Hide CWD                       | `ui.footer.hideCWD`                      | Hide the current working directory path in the footer.                                                                                                            | `false` |
+| Hide Sandbox Status            | `ui.footer.hideSandboxStatus`            | Hide the sandbox status indicator in the footer.                                                                                                                  | `false` |
+| Hide Model Info                | `ui.footer.hideModelInfo`                | Hide the model name and context usage in the footer.                                                                                                              | `false` |
+| Hide Context Window Percentage | `ui.footer.hideContextPercentage`        | Hides the context window remaining percentage.                                                                                                                    | `true`  |
+| Hide Footer                    | `ui.hideFooter`                          | Hide the footer from the UI                                                                                                                                       | `false` |
+| Show Memory Usage              | `ui.showMemoryUsage`                     | Display memory usage information in the UI                                                                                                                        | `false` |
+| Show Line Numbers              | `ui.showLineNumbers`                     | Show line numbers in the chat.                                                                                                                                    | `true`  |
+| Show Citations                 | `ui.showCitations`                       | Show citations for generated text in the chat.                                                                                                                    | `false` |
+| Show Model Info In Chat        | `ui.showModelInfoInChat`                 | Show the model name in the chat for each model turn.                                                                                                              | `false` |
+| Use Full Width                 | `ui.useFullWidth`                        | Use the entire width of the terminal for output.                                                                                                                  | `true`  |
+| Use Alternate Screen Buffer    | `ui.useAlternateBuffer`                  | Use an alternate screen buffer for the UI, preserving shell history.                                                                                              | `false` |
+| Incremental Rendering          | `ui.incrementalRendering`                | Enable incremental rendering for the UI. This option will reduce flickering but may cause rendering artifacts. Only supported when useAlternateBuffer is enabled. | `true`  |
+| Disable Loading Phrases        | `ui.accessibility.disableLoadingPhrases` | Disable loading phrases for accessibility                                                                                                                         | `false` |
+| Screen Reader Mode             | `ui.accessibility.screenReader`          | Render output in plain-text to be more screen reader accessible                                                                                                   | `false` |
 
 ### IDE
 
@@ -69,7 +73,7 @@ they appear in the UI.
 | UI Label                | Setting                      | Description                                                                            | Default |
 | ----------------------- | ---------------------------- | -------------------------------------------------------------------------------------- | ------- |
 | Max Session Turns       | `model.maxSessionTurns`      | Maximum number of user/model/tool turns to keep in a session. -1 means unlimited.      | `-1`    |
-| Compression Threshold   | `model.compressionThreshold` | The fraction of context usage at which to trigger context compression (e.g. 0.2, 0.3). | `0.2`   |
+| Compression Threshold   | `model.compressionThreshold` | The fraction of context usage at which to trigger context compression (e.g. 0.2, 0.3). | `0.5`   |
 | Skip Next Speaker Check | `model.skipNextSpeakerCheck` | Skip the next speaker check.                                                           | `true`  |
 
 ### Context
@@ -85,30 +89,40 @@ they appear in the UI.
 
 ### Tools
 
-| UI Label                         | Setting                              | Description                                                                                                     | Default |
-| -------------------------------- | ------------------------------------ | --------------------------------------------------------------------------------------------------------------- | ------- |
-| Enable Interactive Shell         | `tools.shell.enableInteractiveShell` | Use node-pty for an interactive shell experience. Fallback to child_process still applies.                      | `true`  |
-| Show Color                       | `tools.shell.showColor`              | Show color in shell output.                                                                                     | `false` |
-| Auto Accept                      | `tools.autoAccept`                   | Automatically accept and execute tool calls that are considered safe (e.g., read-only operations).              | `false` |
-| Use Ripgrep                      | `tools.useRipgrep`                   | Use ripgrep for file content search instead of the fallback implementation. Provides faster search performance. | `true`  |
-| Enable Tool Output Truncation    | `tools.enableToolOutputTruncation`   | Enable truncation of large tool outputs.                                                                        | `true`  |
-| Tool Output Truncation Threshold | `tools.truncateToolOutputThreshold`  | Truncate tool output if it is larger than this many characters. Set to -1 to disable.                           | `10000` |
-| Tool Output Truncation Lines     | `tools.truncateToolOutputLines`      | The number of lines to keep when truncating tool output.                                                        | `100`   |
+| UI Label                         | Setting                              | Description                                                                                                     | Default   |
+| -------------------------------- | ------------------------------------ | --------------------------------------------------------------------------------------------------------------- | --------- |
+| Enable Interactive Shell         | `tools.shell.enableInteractiveShell` | Use node-pty for an interactive shell experience. Fallback to child_process still applies.                      | `true`    |
+| Show Color                       | `tools.shell.showColor`              | Show color in shell output.                                                                                     | `false`   |
+| Auto Accept                      | `tools.autoAccept`                   | Automatically accept and execute tool calls that are considered safe (e.g., read-only operations).              | `false`   |
+| Use Ripgrep                      | `tools.useRipgrep`                   | Use ripgrep for file content search instead of the fallback implementation. Provides faster search performance. | `true`    |
+| Enable Tool Output Truncation    | `tools.enableToolOutputTruncation`   | Enable truncation of large tool outputs.                                                                        | `true`    |
+| Tool Output Truncation Threshold | `tools.truncateToolOutputThreshold`  | Truncate tool output if it is larger than this many characters. Set to -1 to disable.                           | `4000000` |
+| Tool Output Truncation Lines     | `tools.truncateToolOutputLines`      | The number of lines to keep when truncating tool output.                                                        | `1000`    |
 
 ### Security
 
-| UI Label                      | Setting                                         | Description                                               | Default |
-| ----------------------------- | ----------------------------------------------- | --------------------------------------------------------- | ------- |
-| Disable YOLO Mode             | `security.disableYoloMode`                      | Disable YOLO mode, even if enabled by a flag.             | `false` |
-| Blocks extensions from Git    | `security.blockGitExtensions`                   | Blocks installing and loading extensions from Git.        | `false` |
-| Folder Trust                  | `security.folderTrust.enabled`                  | Setting to track whether Folder trust is enabled.         | `false` |
-| Allowed Environment Variables | `security.environmentVariableRedaction.allowed` | Environment variables to always allow (bypass redaction). | `[]`    |
-| Blocked Environment Variables | `security.environmentVariableRedaction.blocked` | Environment variables to always redact.                   | `[]`    |
+| UI Label                              | Setting                                         | Description                                                                     | Default |
+| ------------------------------------- | ----------------------------------------------- | ------------------------------------------------------------------------------- | ------- |
+| Disable YOLO Mode                     | `security.disableYoloMode`                      | Disable YOLO mode, even if enabled by a flag.                                   | `false` |
+| Allow Permanent Tool Approval         | `security.enablePermanentToolApproval`          | Enable the "Allow for all future sessions" option in tool confirmation dialogs. | `false` |
+| Blocks extensions from Git            | `security.blockGitExtensions`                   | Blocks installing and loading extensions from Git.                              | `false` |
+| Folder Trust                          | `security.folderTrust.enabled`                  | Setting to track whether Folder trust is enabled.                               | `false` |
+| Enable Environment Variable Redaction | `security.environmentVariableRedaction.enabled` | Enable redaction of environment variables that may contain secrets.             | `false` |
 
 ### Experimental
 
-| UI Label                            | Setting                                                 | Description                                                  | Default |
-| ----------------------------------- | ------------------------------------------------------- | ------------------------------------------------------------ | ------- |
-| Enable Codebase Investigator        | `experimental.codebaseInvestigatorSettings.enabled`     | Enable the Codebase Investigator agent.                      | `true`  |
-| Codebase Investigator Max Num Turns | `experimental.codebaseInvestigatorSettings.maxNumTurns` | Maximum number of turns for the Codebase Investigator agent. | `10`    |
-| Agent Skills                        | `experimental.skills`                                   | Enable Agent Skills (experimental).                          | `false` |
+| UI Label                            | Setting                                                 | Description                                                                         | Default |
+| ----------------------------------- | ------------------------------------------------------- | ----------------------------------------------------------------------------------- | ------- |
+| Agent Skills                        | `experimental.skills`                                   | Enable Agent Skills (experimental).                                                 | `false` |
+| Enable Codebase Investigator        | `experimental.codebaseInvestigatorSettings.enabled`     | Enable the Codebase Investigator agent.                                             | `true`  |
+| Codebase Investigator Max Num Turns | `experimental.codebaseInvestigatorSettings.maxNumTurns` | Maximum number of turns for the Codebase Investigator agent.                        | `10`    |
+| Use OSC 52 Paste                    | `experimental.useOSC52Paste`                            | Use OSC 52 sequence for pasting instead of clipboardy (useful for remote sessions). | `false` |
+| Enable CLI Help Agent               | `experimental.cliHelpAgentSettings.enabled`             | Enable the CLI Help Agent.                                                          | `true`  |
+
+### Hooks
+
+| UI Label           | Setting               | Description                                      | Default |
+| ------------------ | --------------------- | ------------------------------------------------ | ------- |
+| Hook Notifications | `hooks.notifications` | Show visual indicators when hooks are executing. | `true`  |
+
+<!-- SETTINGS-AUTOGEN:END -->

package/dist/docs/core/policy-engine.md

@@ -258,8 +258,9 @@ The Gemini CLI ships with a set of default policies to provide a safe
 out-of-the-box experience.
 
 - **Read-only tools** (like `read_file`, `glob`) are generally **allowed**.
-- **Agent delegation** (like `delegate_to_agent`) is **allowed** (sub-agent
-  actions are checked individually).
+- **Agent delegation** (like `delegate_to_agent`) defaults to **`ask_user`** to
+  ensure remote agents can prompt for confirmation, but local sub-agent actions
+  are executed silently and checked individually.
 - **Write tools** (like `write_file`, `run_shell_command`) default to
   **`ask_user`**.
 - In **`yolo`** mode, a high-priority rule allows all tools.

package/dist/docs/extensions/index.md

@@ -165,7 +165,7 @@ The file has the following structure:
 - `version`: The version of the extension.
 - `mcpServers`: A map of MCP servers to settings. The key is the name of the
   server, and the value is the server configuration. These servers will be
-  loaded on startup just like MCP servers settingsd in a
+  loaded on startup just like MCP servers settings in a
   [`settings.json` file](../get-started/configuration.md). If both an extension
   and a `settings.json` file settings an MCP server with the same name, the
   server defined in the `settings.json` file takes precedence.
@@ -226,13 +226,13 @@ key. The value will be saved to a `.env` file in the extension's directory
 You can view a list of an extension's settings by running:
 
 ```
-gemini extensions settings list <extension name>
+gemini extensions list
 ```
 
 and you can update a given setting using:
 
 ```
-gemini extensions settings set <extension name> <setting name> [--scope <scope>]
+gemini extensions config <extension name> [setting name] [--scope <scope>]
 ```
 
 - `--scope`: The scope to set the setting in (`user` or `workspace`). This is
@@ -263,6 +263,54 @@ Would provide these commands:
 - `/deploy` - Shows as `[gcp] Custom command from deploy.toml` in help
 - `/gcs:sync` - Shows as `[gcp] Custom command from sync.toml` in help
 
+### Hooks
+
+Extensions can provide [hooks](../hooks/index.md) to intercept and customize
+Gemini CLI behavior at specific lifecycle events. Hooks provided by an extension
+must be defined in a `hooks/hooks.json` file within the extension directory.
+
+> [!IMPORTANT] Hooks are not defined directly in `gemini-extension.json`. The
+> CLI specifically looks for the `hooks/hooks.json` file.
+
+#### Directory structure
+
+```
+.gemini/extensions/my-extension/
+├── gemini-extension.json
+└── hooks/
+    └── hooks.json
+```
+
+#### `hooks/hooks.json` format
+
+The `hooks.json` file contains a `hooks` object where keys are
+[event names](../hooks/reference.md#supported-events) and values are arrays of
+[hook definitions](../hooks/reference.md#hook-definition).
+
+```json
+{
+  "hooks": {
+    "before_agent": [
+      {
+        "hooks": [
+          {
+            "type": "command",
+            "command": "node ${extensionPath}/scripts/setup.js",
+            "name": "Extension Setup"
+          }
+        ]
+      }
+    ]
+  }
+}
+```
+
+#### Supported variables
+
+Just like `gemini-extension.json`, the `hooks/hooks.json` file supports
+[variable substitution](#variables). This is particularly useful for referencing
+scripts within the extension directory using `${extensionPath}`.
+
 ### Conflict resolution
 
 Extension commands have the lowest precedence. When a conflict occurs with user
@@ -278,11 +326,12 @@ For example, if both a user and the `gcp` extension define a `deploy` command:
 - `/gcp.deploy` - Executes the extension's deploy command (marked with `[gcp]`
   tag)
 
-## Variables
+### Variables
 
-Gemini CLI extensions allow variable substitution in `gemini-extension.json`.
-This can be useful if e.g., you need the current directory to run an MCP server
-using `"cwd": "${extensionPath}${/}run.ts"`.
+Gemini CLI extensions allow variable substitution in both
+`gemini-extension.json` and `hooks/hooks.json`. This can be useful if e.g., you
+need the current directory to run an MCP server or hook script using
+`"cwd": "${extensionPath}${/}run.ts"`.
 
 **Supported variables:**
 
@@ -291,3 +340,4 @@ using `"cwd": "${extensionPath}${/}run.ts"`.
 | `${extensionPath}`         | The fully-qualified path of the extension in the user's filesystem e.g., '/Users/username/.gemini/extensions/example-extension'. This will not unwrap symlinks. |
 | `${workspacePath}`         | The fully-qualified path of the current workspace.                                                                                                              |
 | `${/} or ${pathSeparator}` | The path separator (differs per OS).                                                                                                                            |
+| `${process.execPath}`      | The path to the Node.js binary executing the CLI.                                                                                                               |

package/dist/docs/get-started/configuration.md

@@ -159,7 +159,7 @@ their corresponding top-level category object in your `settings.json` file.
 #### `output`
 
 - **`output.format`** (enum):
-  - **Description:** The format of the CLI output.
+  - **Description:** The format of the CLI output. Can be `text` or `json`.
   - **Default:** `"text"`
   - **Values:** `"text"`, `"json"`
 
@@ -184,6 +184,12 @@ their corresponding top-level category object in your `settings.json` file.
     title
   - **Default:** `false`
 
+- **`ui.showHomeDirectoryWarning`** (boolean):
+  - **Description:** Show a warning when running Gemini CLI in the home
+    directory.
+  - **Default:** `true`
+  - **Requires restart:** Yes
+
 - **`ui.hideTips`** (boolean):
   - **Description:** Hide helpful tips in the UI
   - **Default:** `false`
@@ -269,7 +275,7 @@ their corresponding top-level category object in your `settings.json` file.
 #### `ide`
 
 - **`ide.enabled`** (boolean):
-  - **Description:** Enable IDE integration mode
+  - **Description:** Enable IDE integration mode.
   - **Default:** `false`
   - **Requires restart:** Yes
 
@@ -573,12 +579,12 @@ their corresponding top-level category object in your `settings.json` file.
   - **Default:** `false`
 
 - **`context.fileFiltering.respectGitIgnore`** (boolean):
-  - **Description:** Respect .gitignore files when searching
+  - **Description:** Respect .gitignore files when searching.
   - **Default:** `true`
   - **Requires restart:** Yes
 
 - **`context.fileFiltering.respectGeminiIgnore`** (boolean):
-  - **Description:** Respect .geminiignore files when searching
+  - **Description:** Respect .geminiignore files when searching.
   - **Default:** `true`
   - **Requires restart:** Yes
 
@@ -851,9 +857,9 @@ their corresponding top-level category object in your `settings.json` file.
     (useful for remote sessions).
   - **Default:** `false`
 
-- **`experimental.introspectionAgentSettings.enabled`** (boolean):
-  - **Description:** Enable the Introspection Agent.
-  - **Default:** `false`
+- **`experimental.cliHelpAgentSettings.enabled`** (boolean):
+  - **Description:** Enable the CLI Help Agent.
+  - **Default:** `true`
   - **Requires restart:** Yes
 
 #### `skills`

package/dist/docs/get-started/gemini-3.md

@@ -1,25 +1,10 @@
 # Gemini 3 Pro and Gemini 3 Flash on Gemini CLI
 
-Gemini 3 Pro and Gemini 3 Flash are now available on Gemini CLI! Currently, most
-paid customers of Gemini CLI will have access to both Gemini 3 Pro and Gemini 3
-Flash, including the following subscribers:
-
-- Google AI Pro and Google AI Ultra (excluding business customers).
-- Gemini Code Assist Standard and Enterprise (requires
-  [administrative enablement](#administrator-instructions)).
-- Paid Gemini API and Vertex API key holders.
-
-For free tier users:
-
-- If you signed up for the waitlist, please check your email for details. We’ve
-  onboarded everyone who signed up to the previously available waitlist.
-- If you were not on our waitlist, we’re rolling out additional access gradually
-  to ensure the experience remains fast and reliable. Stay tuned for more
-  details.
+Gemini 3 Pro and Gemini 3 Flash are available on Gemini CLI for all users!
 
 ## How to get started with Gemini 3 on Gemini CLI
 
-Get started by upgrading Gemini CLI to the latest version (0.21.1):
+Get started by upgrading Gemini CLI to the latest version:
 
 ```bash
 npm install -g @google/gemini-cli@latest

package/dist/docs/hooks/best-practices.md

@@ -852,5 +852,5 @@ console.log(JSON.stringify(sanitizeOutput(hookOutput)));
 
 - [Hooks Reference](index.md) - Complete API reference
 - [Writing Hooks](writing-hooks.md) - Tutorial and examples
-- [Configuration](../cli/configuration.md) - Gemini CLI settings
+- [Configuration](../get-started/configuration.md) - Gemini CLI settings
 - [Hooks Design Document](../hooks-design.md) - Technical architecture

package/dist/docs/hooks/index.md

@@ -4,6 +4,19 @@ Hooks are scripts or programs that Gemini CLI executes at specific points in the
 agentic loop, allowing you to intercept and customize behavior without modifying
 the CLI's source code.
 
+> **Note: Hooks are currently an experimental feature.**
+>
+> To use hooks, you must explicitly enable them in your `settings.json`:
+>
+> ```json
+> {
+>   "tools": { "enableHooks": true },
+>   "hooks": { "enabled": true }
+> }
+> ```
+>
+> Both of these are needed in this experimental phase.
+
 See [writing hooks guide](writing-hooks.md) for a tutorial on creating your
 first hook and a comprehensive example.
 
@@ -29,10 +42,10 @@ Gemini CLI waits for all matching hooks to complete before continuing.
 
 ## Security and Risks
 
-> [!WARNING] **Hooks execute arbitrary code with your user privileges.**
-
-By configuring hooks, you are explicitly allowing Gemini CLI to run shell
-commands on your machine. Malicious or poorly configured hooks can:
+> **Warning: Hooks execute arbitrary code with your user privileges.**
+>
+> By configuring hooks, you are explicitly allowing Gemini CLI to run shell
+> commands on your machine. Malicious or poorly configured hooks can:
 
 - **Exfiltrate data**: Read sensitive files (`.env`, ssh keys) and send them to
   remote servers.
@@ -46,6 +59,11 @@ project hook (identified by its name and command), but it is **your
 responsibility** to review these hooks (and any installed extensions) before
 trusting them.
 
+> **Note:** Extension hooks are subject to a mandatory security warning and
+> consent flow during extension installation or update if hooks are detected.
+> You must explicitly approve the installation or update of any extension that
+> contains hooks.
+
 See [Security Considerations](best-practices.md#using-hooks-securely) for a
 detailed threat model and mitigation strategies.
 
@@ -444,7 +462,8 @@ numbers run first):
 2.  **User settings:** `~/.gemini/settings.json`
 3.  **System settings:** `/etc/gemini-cli/settings.json`
 4.  **Extensions:** Internal hooks defined by installed extensions (lowest
-    priority)
+    priority). See [Extensions documentation](../extensions/index.md#hooks) for
+    details on how extensions define and configure hooks.
 
 #### Deduplication and shadowing
 
@@ -514,14 +533,29 @@ Use the `/hooks panel` command to view all registered hooks:
 
 This command displays:
 
-- All active hooks organized by event
+- All configured hooks organized by event
 - Hook source (user, project, system)
 - Hook type (command or plugin)
-- Execution status and recent output
+- Individual hook status (enabled/disabled)
+
+### Enable and disable all hooks at once
+
+You can enable or disable all hooks at once using commands:
+
+```bash
+/hooks enable-all
+/hooks disable-all
+```
+
+These commands provide a shortcut to enable or disable all configured hooks
+without managing them individually. The `enable-all` command removes all hooks
+from the `hooks.disabled` array, while `disable-all` adds all configured hooks
+to the disabled list. Changes take effect immediately without requiring a
+restart.
 
-### Enable and disable hooks
+### Enable and disable individual hooks
 
-You can temporarily enable or disable individual hooks using commands:
+You can enable or disable individual hooks using commands:
 
 ```bash
 /hooks enable hook-name
@@ -530,7 +564,8 @@ You can temporarily enable or disable individual hooks using commands:
 
 These commands allow you to control hook execution without editing configuration
 files. The hook name should match the `name` field in your hook configuration.
-Changes made via these commands are persisted to your global User settings
+Changes made via these commands are persisted to your settings. The settings are
+saved to workspace scope if available, otherwise to your global user settings
 (`~/.gemini/settings.json`).
 
 ### Disabled hooks configuration
@@ -683,5 +718,6 @@ matchers:
 - [Best Practices](best-practices.md) - Security, performance, and debugging
 - [Custom Commands](../cli/custom-commands.md) - Create reusable prompt
   shortcuts
-- [Configuration](../cli/configuration.md) - Gemini CLI configuration options
+- [Configuration](../get-started/configuration.md) - Gemini CLI configuration
+  options
 - [Hooks Design Document](../hooks-design.md) - Technical architecture details

package/dist/docs/hooks/reference.md

@@ -46,6 +46,16 @@ specific event.
 - `tool_input`: (`object`) The arguments passed to the tool.
 - `tool_response`: (`object`, **AfterTool only**) The raw output from the tool
   execution.
+- `mcp_context`: (`object`, **optional**) Present only for MCP tool invocations.
+  Contains server identity information:
+  - `server_name`: (`string`) The configured name of the MCP server.
+  - `tool_name`: (`string`) The original tool name from the MCP server.
+  - `command`: (`string`, optional) For stdio transport, the command used to
+    start the server.
+  - `args`: (`string[]`, optional) For stdio transport, the command arguments.
+  - `cwd`: (`string`, optional) For stdio transport, the working directory.
+  - `url`: (`string`, optional) For SSE/HTTP transport, the server URL.
+  - `tcp`: (`string`, optional) For WebSocket transport, the TCP address.
 
 #### Agent Events (`BeforeAgent`, `AfterAgent`)
 
@@ -84,15 +94,15 @@ If the hook exits with `0`, the CLI attempts to parse `stdout` as JSON.
 
 ### Common Output Fields
 
-| Field                | Type      | Description                                                              |
-| :------------------- | :-------- | :----------------------------------------------------------------------- |
-| `decision`           | `string`  | One of: `allow`, `deny`, `block`, `ask`, `approve`.                      |
-| `reason`             | `string`  | Explanation shown to the **agent** when a decision is `deny` or `block`. |
-| `systemMessage`      | `string`  | Message displayed to the **user** in the CLI terminal.                   |
-| `continue`           | `boolean` | If `false`, immediately terminates the agent loop for this turn.         |
-| `stopReason`         | `string`  | Message shown to the user when `continue` is `false`.                    |
-| `suppressOutput`     | `boolean` | If `true`, the hook execution is hidden from the CLI transcript.         |
-| `hookSpecificOutput` | `object`  | Container for event-specific data (see below).                           |
+| Field                | Type      | Description                                                                            |
+| :------------------- | :-------- | :------------------------------------------------------------------------------------- |
+| `decision`           | `string`  | One of: `allow`, `deny`, `block`, `ask`, `approve`.                                    |
+| `reason`             | `string`  | Explanation shown to the **agent** when a decision is `deny` or `block`.               |
+| `systemMessage`      | `string`  | Message displayed in Gemini CLI terminal to provide warning or context to the **user** |
+| `continue`           | `boolean` | If `false`, immediately terminates the agent loop for this turn.                       |
+| `stopReason`         | `string`  | Message shown to the user when `continue` is `false`.                                  |
+| `suppressOutput`     | `boolean` | If `true`, the hook execution is hidden from the CLI transcript.                       |
+| `hookSpecificOutput` | `object`  | Container for event-specific data (see below).                                         |
 
 ### `hookSpecificOutput` Reference
 

package/dist/docs/hooks/writing-hooks.md

@@ -1018,9 +1018,27 @@ const SECRET_PATTERNS = [
 ];
 ```
 
+## Packaging as an extension
+
+While project-level hooks are great for specific repositories, you might want to
+share your hooks across multiple projects or with other users. You can do this
+by packaging your hooks as a [Gemini CLI extension](../extensions/index.md).
+
+Packaging as an extension provides:
+
+- **Easy distribution:** Share hooks via a git repository or GitHub release.
+- **Centralized management:** Install, update, and disable hooks using
+  `gemini extensions` commands.
+- **Version control:** Manage hook versions separately from your project code.
+- **Variable substitution:** Use `${extensionPath}` and `${process.execPath}`
+  for portable, cross-platform scripts.
+
+To package hooks as an extension, follow the
+[extensions hook documentation](../extensions/index.md#hooks).
+
 ## Learn more
 
 - [Hooks Reference](index.md) - Complete API reference and configuration
 - [Best Practices](best-practices.md) - Security, performance, and debugging
-- [Configuration](../cli/configuration.md) - Gemini CLI settings
+- [Configuration](../get-started/configuration.md) - Gemini CLI settings
 - [Custom Commands](../cli/custom-commands.md) - Create custom commands

package/dist/docs/troubleshooting.md

@@ -43,9 +43,15 @@ topics on:
   - **Cause:** You may be on a corporate network with a firewall that intercepts
     and inspects SSL/TLS traffic. This often requires a custom root CA
     certificate to be trusted by Node.js.
-  - **Solution:** Set the `NODE_EXTRA_CA_CERTS` environment variable to the
-    absolute path of your corporate root CA certificate file.
-    - Example: `export NODE_EXTRA_CA_CERTS=/path/to/your/corporate-ca.crt`
+  - **Solution:** First try setting `NODE_USE_SYSTEM_CA`; if that does not
+    resolve the issue, set `NODE_EXTRA_CA_CERTS`.
+    - Set the `NODE_USE_SYSTEM_CA=1` environment variable to tell Node.js to use
+      the operating system's native certificate store (where corporate
+      certificates are typically already installed).
+      - Example: `export NODE_USE_SYSTEM_CA=1`
+    - Set the `NODE_EXTRA_CA_CERTS` environment variable to the absolute path of
+      your corporate root CA certificate file.
+      - Example: `export NODE_EXTRA_CA_CERTS=/path/to/your/corporate-ca.crt`
 
 ## Common error messages and solutions
 

package/dist/src/agents/a2a-client-manager.d.ts

@@ -32,6 +32,10 @@ export declare class A2AClientManager {
      * @returns The loaded AgentCard.
      */
     loadAgent(name: string, agentCardUrl: string, authHandler?: AuthenticationHandler): Promise<AgentCard>;
+    /**
+     * Invalidates all cached clients and agent cards.
+     */
+    clearCache(): void;
     /**
      * Sends a message to a loaded agent.
      * @param agentName The name of the agent to send the message to.