@gmod/tabix 1.5.15 → 1.6.1

package/dist/indexFile.js

@@ -1,35 +1,13 @@
 "use strict";
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-var __rest = (this && this.__rest) || function (s, e) {
-    var t = {};
-    for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p) && e.indexOf(p) < 0)
-        t[p] = s[p];
-    if (s != null && typeof Object.getOwnPropertySymbols === "function")
-        for (var i = 0, p = Object.getOwnPropertySymbols(s); i < p.length; i++) {
-            if (e.indexOf(p[i]) < 0 && Object.prototype.propertyIsEnumerable.call(s, p[i]))
-                t[p[i]] = s[p[i]];
-        }
-    return t;
-};
 Object.defineProperty(exports, "__esModule", { value: true });
 class IndexFile {
     constructor({ filehandle, renameRefSeqs = (n) => n, }) {
         this.filehandle = filehandle;
         this.renameRefSeq = renameRefSeqs;
     }
-    getMetadata() {
-        return __awaiter(this, arguments, void 0, function* (opts = {}) {
-            const _a = yield this.parse(opts), { indices: _indices } = _a, rest = __rest(_a, ["indices"]);
-            return rest;
-        });
+    async getMetadata(opts = {}) {
+        const { indices: _indices, ...rest } = await this.parse(opts);
+        return rest;
     }
     _findFirstData(currentFdl, virtualOffset) {
         if (currentFdl) {
@@ -41,23 +19,19 @@ class IndexFile {
             return virtualOffset;
         }
     }
-    parse() {
-        return __awaiter(this, arguments, void 0, function* (opts = {}) {
-            if (!this.parseP) {
-                this.parseP = this._parse(opts).catch((e) => {
-                    this.parseP = undefined;
-                    throw e;
-                });
-            }
-            return this.parseP;
-        });
+    async parse(opts = {}) {
+        if (!this.parseP) {
+            this.parseP = this._parse(opts).catch((e) => {
+                this.parseP = undefined;
+                throw e;
+            });
+        }
+        return this.parseP;
     }
-    hasRefSeq(seqId_1) {
-        return __awaiter(this, arguments, void 0, function* (seqId, opts = {}) {
-            var _a;
-            const idx = yield this.parse(opts);
-            return !!((_a = idx.indices[seqId]) === null || _a === void 0 ? void 0 : _a.binIndex);
-        });
+    async hasRefSeq(seqId, opts = {}) {
+        var _a;
+        const idx = await this.parse(opts);
+        return !!((_a = idx.indices[seqId]) === null || _a === void 0 ? void 0 : _a.binIndex);
     }
 }
 exports.default = IndexFile;

package/dist/indexFile.js.map

@@ -1 +1 @@
-{"version":3,"file":"indexFile.js","sourceRoot":"","sources":["../src/indexFile.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;AAoBA,MAA8B,SAAS;IAKrC,YAAY,EACV,UAAU,EACV,aAAa,GAAG,CAAC,CAAS,EAAE,EAAE,CAAC,CAAC,GAIjC;QACC,IAAI,CAAC,UAAU,GAAG,UAAU,CAAA;QAC5B,IAAI,CAAC,YAAY,GAAG,aAAa,CAAA;IACnC,CAAC;IAMY,WAAW;6DAAC,OAAgB,EAAE;YACzC,MAAM,KAAiC,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,EAAvD,EAAE,OAAO,EAAE,QAAQ,OAAoC,EAA/B,IAAI,cAA5B,WAA8B,CAAyB,CAAA;YAC7D,OAAO,IAAI,CAAA;QACb,CAAC;KAAA;IASD,cAAc,CACZ,UAAqC,EACrC,aAA4B;QAE5B,IAAI,UAAU,EAAE,CAAC;YACf,OAAO,UAAU,CAAC,SAAS,CAAC,aAAa,CAAC,GAAG,CAAC;gBAC5C,CAAC,CAAC,aAAa;gBACf,CAAC,CAAC,UAAU,CAAA;QAChB,CAAC;aAAM,CAAC;YACN,OAAO,aAAa,CAAA;QACtB,CAAC;IACH,CAAC;IAEK,KAAK;6DAAC,OAAgB,EAAE;YAC5B,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,CAAC;gBACjB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAU,EAAE,EAAE;oBACnD,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;oBACvB,MAAM,CAAC,CAAA;gBACT,CAAC,CAAC,CAAA;YACJ,CAAC;YACD,OAAO,IAAI,CAAC,MAAM,CAAA;QACpB,CAAC;KAAA;IAEK,SAAS;6DAAC,KAAa,EAAE,OAAgB,EAAE;;YAC/C,MAAM,GAAG,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;YAClC,OAAO,CAAC,CAAC,CAAA,MAAA,GAAG,CAAC,OAAO,CAAC,KAAK,CAAC,0CAAE,QAAQ,CAAA,CAAA;QACvC,CAAC;KAAA;CACF;AA3DD,4BA2DC"}
+{"version":3,"file":"indexFile.js","sourceRoot":"","sources":["../src/indexFile.ts"],"names":[],"mappings":";;AAoBA,MAA8B,SAAS;IAKrC,YAAY,EACV,UAAU,EACV,aAAa,GAAG,CAAC,CAAS,EAAE,EAAE,CAAC,CAAC,GAIjC;QACC,IAAI,CAAC,UAAU,GAAG,UAAU,CAAA;QAC5B,IAAI,CAAC,YAAY,GAAG,aAAa,CAAA;IACnC,CAAC;IAMM,KAAK,CAAC,WAAW,CAAC,OAAgB,EAAE;QACzC,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QAC7D,OAAO,IAAI,CAAA;IACb,CAAC;IASD,cAAc,CACZ,UAAqC,EACrC,aAA4B;QAE5B,IAAI,UAAU,EAAE,CAAC;YACf,OAAO,UAAU,CAAC,SAAS,CAAC,aAAa,CAAC,GAAG,CAAC;gBAC5C,CAAC,CAAC,aAAa;gBACf,CAAC,CAAC,UAAU,CAAA;QAChB,CAAC;aAAM,CAAC;YACN,OAAO,aAAa,CAAA;QACtB,CAAC;IACH,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,OAAgB,EAAE;QAC5B,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,CAAC;YACjB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAU,EAAE,EAAE;gBACnD,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;gBACvB,MAAM,CAAC,CAAA;YACT,CAAC,CAAC,CAAA;QACJ,CAAC;QACD,OAAO,IAAI,CAAC,MAAM,CAAA;IACpB,CAAC;IAED,KAAK,CAAC,SAAS,CAAC,KAAa,EAAE,OAAgB,EAAE;;QAC/C,MAAM,GAAG,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QAClC,OAAO,CAAC,CAAC,CAAA,MAAA,GAAG,CAAC,OAAO,CAAC,KAAK,CAAC,0CAAE,QAAQ,CAAA,CAAA;IACvC,CAAC;CACF;AA3DD,4BA2DC"}