@gmod/tabix 1.5.0 → 1.5.3

package/CHANGELOG.md

@@ -1,3 +1,23 @@
+## [1.5.3](https://github.com/GMOD/tabix-js/compare/v1.5.2...v1.5.3) (2022-04-25)
+
+
+
+- Fix esm module build to use ESM instead of CJS
+
+<a name="1.5.2"></a>
+## [1.5.2](https://github.com/GMOD/tabix-js/compare/v1.5.1...v1.5.2) (2021-12-15)
+
+
+
+- Change typescript signature of lineCallback from Promise<void> to void
+
+<a name="1.5.1"></a>
+## [1.5.1](https://github.com/GMOD/tabix-js/compare/v1.5.0...v1.5.1) (2021-12-15)
+
+
+
+- Add esm module with less babelification for smaller bundle size
+
 <a name="1.5.0"></a>
 # [1.5.0](https://github.com/GMOD/tabix-js/compare/v1.4.6...v1.5.0) (2020-12-11)
 

package/README.md

@@ -1,8 +1,9 @@
 # @gmod/tabix
 
 [![NPM version](https://img.shields.io/npm/v/@gmod/tabix.svg?style=flat-square)](https://npmjs.org/package/@gmod/tabix)
-[![Build Status](https://img.shields.io/travis/GMOD/tabix-js/master.svg?style=flat-square)](https://travis-ci.org/GMOD/tabix-js)
-[![codecov](https://codecov.io/gh/GMOD/tabix-js/branch/master/graph/badge.svg)](https://codecov.io/gh/GMOD/tabix-js)
+[![Coverage Status](https://img.shields.io/codecov/c/github/GMOD/tabix-js/master.svg?style=flat-square)](https://codecov.io/gh/GMOD/tabix-js/branch/master)
+[![Build Status](https://img.shields.io/github/workflow/status/GMOD/tabix-js/Push/master?logo=github&style=flat-query)](https://github.com/GMOD/tabix-js/actions?query=branch%3Amaster+workflow%3APush+)
+
 
 
 Read Tabix-indexed files using either .tbi or .csi indexes.

package/dist/chunk.js

@@ -1,66 +1,38 @@
 "use strict";
-
-var _interopRequireDefault = require("@babel/runtime-corejs2/helpers/interopRequireDefault");
-
-var _Object$defineProperty = require("@babel/runtime-corejs2/core-js/object/define-property");
-
-_Object$defineProperty(exports, "__esModule", {
-  value: true
-});
-
-exports.default = void 0;
-
-var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime-corejs2/helpers/classCallCheck"));
-
-var _createClass2 = _interopRequireDefault(require("@babel/runtime-corejs2/helpers/createClass"));
-
-var _defineProperty2 = _interopRequireDefault(require("@babel/runtime-corejs2/helpers/defineProperty"));
-
+Object.defineProperty(exports, "__esModule", { value: true });
 // little class representing a chunk in the index
-var Chunk = /*#__PURE__*/function () {
-  /**
-   * @param {VirtualOffset} minv
-   * @param {VirtualOffset} maxv
-   * @param {number} bin
-   * @param {number} [fetchedSize]
-   */
-  function Chunk(minv, maxv, bin) {
-    var fetchedSize = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : undefined;
-    (0, _classCallCheck2.default)(this, Chunk);
-    (0, _defineProperty2.default)(this, "minv", void 0);
-    (0, _defineProperty2.default)(this, "maxv", void 0);
-    (0, _defineProperty2.default)(this, "bin", void 0);
-    (0, _defineProperty2.default)(this, "_fetchedSize", void 0);
-    this.minv = minv;
-    this.maxv = maxv;
-    this.bin = bin;
-    this._fetchedSize = fetchedSize;
-  }
-
-  (0, _createClass2.default)(Chunk, [{
-    key: "toUniqueString",
-    value: function toUniqueString() {
-      return "".concat(this.minv, "..").concat(this.maxv, " (bin ").concat(this.bin, ", fetchedSize ").concat(this.fetchedSize(), ")");
+var Chunk = /** @class */ (function () {
+    /**
+     * @param {VirtualOffset} minv
+     * @param {VirtualOffset} maxv
+     * @param {number} bin
+     * @param {number} [fetchedSize]
+     */
+    function Chunk(minv, maxv, bin, fetchedSize) {
+        if (fetchedSize === void 0) { fetchedSize = undefined; }
+        this.minv = minv;
+        this.maxv = maxv;
+        this.bin = bin;
+        this._fetchedSize = fetchedSize;
     }
-  }, {
-    key: "toString",
-    value: function toString() {
-      return this.toUniqueString();
-    }
-  }, {
-    key: "compareTo",
-    value: function compareTo(b) {
-      return this.minv.compareTo(b.minv) || this.maxv.compareTo(b.maxv) || this.bin - b.bin;
-    }
-  }, {
-    key: "fetchedSize",
-    value: function fetchedSize() {
-      if (this._fetchedSize !== undefined) return this._fetchedSize;
-      return this.maxv.blockPosition + (1 << 16) - this.minv.blockPosition;
-    }
-  }]);
-  return Chunk;
-}();
-
+    Chunk.prototype.toUniqueString = function () {
+        return "".concat(this.minv, "..").concat(this.maxv, " (bin ").concat(this.bin, ", fetchedSize ").concat(this.fetchedSize(), ")");
+    };
+    Chunk.prototype.toString = function () {
+        return this.toUniqueString();
+    };
+    Chunk.prototype.compareTo = function (b) {
+        return (this.minv.compareTo(b.minv) ||
+            this.maxv.compareTo(b.maxv) ||
+            this.bin - b.bin);
+    };
+    Chunk.prototype.fetchedSize = function () {
+        if (this._fetchedSize !== undefined) {
+            return this._fetchedSize;
+        }
+        return this.maxv.blockPosition + (1 << 16) - this.minv.blockPosition;
+    };
+    return Chunk;
+}());
 exports.default = Chunk;
-//# sourceMappingURL=data:application/json;charset=utf-8;base64,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
+//# sourceMappingURL=chunk.js.map

package/dist/chunk.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"chunk.js","sourceRoot":"","sources":["../src/chunk.ts"],"names":[],"mappings":";;AAEA,iDAAiD;AACjD;IAME;;;;;OAKG;IACH,eACE,IAAmB,EACnB,IAAmB,EACnB,GAAW,EACX,WAAuB;QAAvB,4BAAA,EAAA,uBAAuB;QAEvB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;QAChB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;QAChB,IAAI,CAAC,GAAG,GAAG,GAAG,CAAA;QACd,IAAI,CAAC,YAAY,GAAG,WAAW,CAAA;IACjC,CAAC;IAED,8BAAc,GAAd;QACE,OAAO,UAAG,IAAI,CAAC,IAAI,eAAK,IAAI,CAAC,IAAI,mBAC/B,IAAI,CAAC,GAAG,2BACO,IAAI,CAAC,WAAW,EAAE,MAAG,CAAA;IACxC,CAAC;IAED,wBAAQ,GAAR;QACE,OAAO,IAAI,CAAC,cAAc,EAAE,CAAA;IAC9B,CAAC;IAED,yBAAS,GAAT,UAAU,CAAQ;QAChB,OAAO,CACL,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC;YAC3B,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC;YAC3B,IAAI,CAAC,GAAG,GAAG,CAAC,CAAC,GAAG,CACjB,CAAA;IACH,CAAC;IAED,2BAAW,GAAX;QACE,IAAI,IAAI,CAAC,YAAY,KAAK,SAAS,EAAE;YACnC,OAAO,IAAI,CAAC,YAAY,CAAA;SACzB;QACD,OAAO,IAAI,CAAC,IAAI,CAAC,aAAa,GAAG,CAAC,CAAC,IAAI,EAAE,CAAC,GAAG,IAAI,CAAC,IAAI,CAAC,aAAa,CAAA;IACtE,CAAC;IACH,YAAC;AAAD,CAAC,AAhDD,IAgDC"}

package/dist/csi.d.ts

@@ -66,7 +66,6 @@ export default class CSI extends IndexFile {
     blocksForRange(refName: string, min: number, max: number, opts?: Options): Promise<Chunk[]>;
     /**
      * calculate the list of bins that may overlap with region [beg,end) (zero-based half-open)
-     * @returns {Array[number]}
      */
     reg2bins(beg: number, end: number): number[][];
 }