@gmod/bbi 9.0.7 → 9.0.9
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/array-feature-view.d.ts +22 -0
- package/dist/array-feature-view.js +30 -1
- package/dist/array-feature-view.js.map +1 -1
- package/dist/index.d.ts +1 -1
- package/dist/index.js +2 -1
- package/dist/index.js.map +1 -1
- package/esm/array-feature-view.d.ts +22 -0
- package/esm/array-feature-view.js +28 -0
- package/esm/array-feature-view.js.map +1 -1
- package/esm/index.d.ts +1 -1
- package/esm/index.js +1 -1
- package/esm/index.js.map +1 -1
- package/package.json +1 -1
- package/src/array-feature-view.ts +36 -0
- package/src/index.ts +1 -1
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@@ -1,4 +1,26 @@
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import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';
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export declare class BigWigFeature {
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private view;
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private i;
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constructor(view: ArrayFeatureView, i: number);
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get(key: 'refName' | 'source'): string;
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get(key: 'start' | 'end' | 'score'): number;
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get(key: 'minScore' | 'maxScore'): number | undefined;
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get(key: 'summary'): boolean;
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get(key: string): any;
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id(): string;
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toJSON(): {
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start: number;
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end: number;
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score: number;
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refName: string;
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source: string;
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uniqueId: string;
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summary: boolean;
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minScore: number | undefined;
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maxScore: number | undefined;
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};
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}
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export declare class ArrayFeatureView {
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readonly starts: Int32Array;
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readonly ends: Int32Array;
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@@ -1,6 +1,35 @@
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"use strict";
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.ArrayFeatureView = void 0;
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exports.ArrayFeatureView = exports.BigWigFeature = void 0;
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class BigWigFeature {
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view;
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i;
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constructor(view, i) {
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this.view = view;
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this.i = i;
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}
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get(key) {
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return this.view.get(this.i, key);
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}
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id() {
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return this.view.id(this.i);
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}
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toJSON() {
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const { view, i } = this;
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return {
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start: view.start(i),
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end: view.end(i),
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score: view.score(i),
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refName: view.refName,
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source: view.source,
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uniqueId: view.id(i),
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summary: view.isSummary,
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minScore: view.minScore(i),
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maxScore: view.maxScore(i),
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};
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}
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}
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exports.BigWigFeature = BigWigFeature;
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class ArrayFeatureView {
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starts;
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ends;
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@@ -1 +1 @@
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-
{"version":3,"file":"array-feature-view.js","sourceRoot":"","sources":["../src/array-feature-view.ts"],"names":[],"mappings":";;;AAEA,MAAa,gBAAgB;IACX,MAAM,CAAY;IAClB,IAAI,CAAY;IAChB,MAAM,CAAc;IACpB,SAAS,CAA0B;IACnC,SAAS,CAA0B;IACnC,SAAS,CAAS;IAC1B,OAAO,CAAQ;IACf,QAAQ,CAAQ;IAExB,YACE,MAAkD,EAClD,MAAc,EACd,OAAe;QAEf,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAA;QACvB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAA;QACjC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,OAAO,GAAG,MAAM,CAAA;QACrB,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAA;IACzB,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,MAAM,CAAC,MAAM,CAAA;IAC3B,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,OAAO,CAAA;IACrB,CAAC;IAED,IAAI,OAAO;QACT,OAAO,IAAI,CAAC,QAAQ,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,GAAG,CAAC,CAAS;QACX,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAE,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,EAAE,CAAC,CAAS;QACV,OAAO,GAAG,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAA;IAC7E,CAAC;IAUD,GAAG,CAAC,CAAS,EAAE,GAAW;QACxB,QAAQ,GAAG,EAAE,CAAC;YACZ,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,KAAK;gBACR,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACrB,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,QAAQ,CAAA;YACtB,KAAK,QAAQ;gBACX,OAAO,IAAI,CAAC,OAAO,CAAA;YACrB,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,SAAS,CAAA;YACvB;gBACE,OAAO,SAAS,CAAA;QACpB,CAAC;IACH,CAAC;CACF;AA3FD,4CA2FC"}
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{"version":3,"file":"array-feature-view.js","sourceRoot":"","sources":["../src/array-feature-view.ts"],"names":[],"mappings":";;;AAEA,MAAa,aAAa;IAEd;IACA;IAFV,YACU,IAAsB,EACtB,CAAS;QADT,SAAI,GAAJ,IAAI,CAAkB;QACtB,MAAC,GAAD,CAAC,CAAQ;IAChB,CAAC;IAQJ,GAAG,CAAC,GAAW;QACb,OAAO,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,EAAE,GAAG,CAAC,CAAA;IACnC,CAAC;IAED,EAAE;QACA,OAAO,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;IAC7B,CAAC;IAED,MAAM;QACJ,MAAM,EAAE,IAAI,EAAE,CAAC,EAAE,GAAG,IAAI,CAAA;QACxB,OAAO;YACL,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,GAAG,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;YAChB,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,QAAQ,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,SAAS;YACvB,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;YAC1B,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;SAC3B,CAAA;IACH,CAAC;CACF;AAlCD,sCAkCC;AAED,MAAa,gBAAgB;IACX,MAAM,CAAY;IAClB,IAAI,CAAY;IAChB,MAAM,CAAc;IACpB,SAAS,CAA0B;IACnC,SAAS,CAA0B;IACnC,SAAS,CAAS;IAC1B,OAAO,CAAQ;IACf,QAAQ,CAAQ;IAExB,YACE,MAAkD,EAClD,MAAc,EACd,OAAe;QAEf,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAA;QACvB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAA;QACjC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,OAAO,GAAG,MAAM,CAAA;QACrB,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAA;IACzB,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,MAAM,CAAC,MAAM,CAAA;IAC3B,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,OAAO,CAAA;IACrB,CAAC;IAED,IAAI,OAAO;QACT,OAAO,IAAI,CAAC,QAAQ,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,GAAG,CAAC,CAAS;QACX,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAE,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,EAAE,CAAC,CAAS;QACV,OAAO,GAAG,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAA;IAC7E,CAAC;IAUD,GAAG,CAAC,CAAS,EAAE,GAAW;QACxB,QAAQ,GAAG,EAAE,CAAC;YACZ,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,KAAK;gBACR,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACrB,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,QAAQ,CAAA;YACtB,KAAK,QAAQ;gBACX,OAAO,IAAI,CAAC,OAAO,CAAA;YACrB,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,SAAS,CAAA;YACvB;gBACE,OAAO,SAAS,CAAA;QACpB,CAAC;IACH,CAAC;CACF;AA3FD,4CA2FC"}
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package/dist/index.d.ts
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export { BigWig } from './bigwig.ts';
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export { BigBed } from './bigbed.ts';
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export { parseBigWig } from './parse-bigwig.ts';
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export { ArrayFeatureView } from './array-feature-view.ts';
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export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts';
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export type { BigWigFeatureArrays, BigWigHeader, BigWigHeaderWithRefNames, Feature, RequestOptions, SummaryFeatureArrays, } from './types.ts';
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package/dist/index.js
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exports.ArrayFeatureView = exports.parseBigWig = exports.BigBed = exports.BigWig = void 0;
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exports.BigWigFeature = exports.ArrayFeatureView = exports.parseBigWig = exports.BigBed = exports.BigWig = void 0;
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var bigwig_ts_1 = require("./bigwig.js");
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Object.defineProperty(exports, "BigWig", { enumerable: true, get: function () { return bigwig_ts_1.BigWig; } });
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Object.defineProperty(exports, "parseBigWig", { enumerable: true, get: function () { return parse_bigwig_ts_1.parseBigWig; } });
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var array_feature_view_ts_1 = require("./array-feature-view.js");
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Object.defineProperty(exports, "ArrayFeatureView", { enumerable: true, get: function () { return array_feature_view_ts_1.ArrayFeatureView; } });
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Object.defineProperty(exports, "BigWigFeature", { enumerable: true, get: function () { return array_feature_view_ts_1.BigWigFeature; } });
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package/dist/index.js.map
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;AAAA,yCAAsC;AACtC,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,qDAA+C;AAAtC,8GAAA,WAAW,OAAA;AACpB,
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;AAAA,yCAAsC;AACtC,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,qDAA+C;AAAtC,8GAAA,WAAW,OAAA;AACpB,iEAAyE;AAAhE,yHAAA,gBAAgB,OAAA;AAAE,sHAAA,aAAa,OAAA"}
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import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';
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export declare class BigWigFeature {
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private view;
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private i;
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constructor(view: ArrayFeatureView, i: number);
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get(key: 'refName' | 'source'): string;
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get(key: 'start' | 'end' | 'score'): number;
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get(key: 'minScore' | 'maxScore'): number | undefined;
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get(key: 'summary'): boolean;
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get(key: string): any;
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id(): string;
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toJSON(): {
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start: number;
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end: number;
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score: number;
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refName: string;
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source: string;
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uniqueId: string;
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summary: boolean;
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minScore: number | undefined;
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maxScore: number | undefined;
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};
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}
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export declare class ArrayFeatureView {
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readonly starts: Int32Array;
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readonly ends: Int32Array;
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export class BigWigFeature {
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view;
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i;
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constructor(view, i) {
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this.i = i;
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}
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get(key) {
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return this.view.get(this.i, key);
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}
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id() {
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return this.view.id(this.i);
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}
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toJSON() {
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const { view, i } = this;
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return {
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start: view.start(i),
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end: view.end(i),
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score: view.score(i),
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refName: view.refName,
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source: view.source,
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uniqueId: view.id(i),
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summary: view.isSummary,
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minScore: view.minScore(i),
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maxScore: view.maxScore(i),
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};
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}
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}
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export class ArrayFeatureView {
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starts;
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-
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|
|
1
|
+
{"version":3,"file":"array-feature-view.js","sourceRoot":"","sources":["../src/array-feature-view.ts"],"names":[],"mappings":"AAEA,MAAM,OAAO,aAAa;IAEd;IACA;IAFV,YACU,IAAsB,EACtB,CAAS;QADT,SAAI,GAAJ,IAAI,CAAkB;QACtB,MAAC,GAAD,CAAC,CAAQ;IAChB,CAAC;IAQJ,GAAG,CAAC,GAAW;QACb,OAAO,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,EAAE,GAAG,CAAC,CAAA;IACnC,CAAC;IAED,EAAE;QACA,OAAO,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;IAC7B,CAAC;IAED,MAAM;QACJ,MAAM,EAAE,IAAI,EAAE,CAAC,EAAE,GAAG,IAAI,CAAA;QACxB,OAAO;YACL,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,GAAG,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;YAChB,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,QAAQ,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,SAAS;YACvB,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;YAC1B,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;SAC3B,CAAA;IACH,CAAC;CACF;AAED,MAAM,OAAO,gBAAgB;IACX,MAAM,CAAY;IAClB,IAAI,CAAY;IAChB,MAAM,CAAc;IACpB,SAAS,CAA0B;IACnC,SAAS,CAA0B;IACnC,SAAS,CAAS;IAC1B,OAAO,CAAQ;IACf,QAAQ,CAAQ;IAExB,YACE,MAAkD,EAClD,MAAc,EACd,OAAe;QAEf,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAA;QACvB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAA;QACjC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,OAAO,GAAG,MAAM,CAAA;QACrB,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAA;IACzB,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,MAAM,CAAC,MAAM,CAAA;IAC3B,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,OAAO,CAAA;IACrB,CAAC;IAED,IAAI,OAAO;QACT,OAAO,IAAI,CAAC,QAAQ,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,GAAG,CAAC,CAAS;QACX,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAE,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,EAAE,CAAC,CAAS;QACV,OAAO,GAAG,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAA;IAC7E,CAAC;IAUD,GAAG,CAAC,CAAS,EAAE,GAAW;QACxB,QAAQ,GAAG,EAAE,CAAC;YACZ,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,KAAK;gBACR,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACrB,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,QAAQ,CAAA;YACtB,KAAK,QAAQ;gBACX,OAAO,IAAI,CAAC,OAAO,CAAA;YACrB,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,SAAS,CAAA;YACvB;gBACE,OAAO,SAAS,CAAA;QACpB,CAAC;IACH,CAAC;CACF"}
|
package/esm/index.d.ts
CHANGED
|
@@ -2,5 +2,5 @@ import './bigint-polyfill/polyfill.ts';
|
|
|
2
2
|
export { BigWig } from './bigwig.ts';
|
|
3
3
|
export { BigBed } from './bigbed.ts';
|
|
4
4
|
export { parseBigWig } from './parse-bigwig.ts';
|
|
5
|
-
export { ArrayFeatureView } from './array-feature-view.ts';
|
|
5
|
+
export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts';
|
|
6
6
|
export type { BigWigFeatureArrays, BigWigHeader, BigWigHeaderWithRefNames, Feature, RequestOptions, SummaryFeatureArrays, } from './types.ts';
|
package/esm/index.js
CHANGED
|
@@ -2,5 +2,5 @@ import "./bigint-polyfill/polyfill.js";
|
|
|
2
2
|
export { BigWig } from "./bigwig.js";
|
|
3
3
|
export { BigBed } from "./bigbed.js";
|
|
4
4
|
export { parseBigWig } from "./parse-bigwig.js";
|
|
5
|
-
export { ArrayFeatureView } from "./array-feature-view.js";
|
|
5
|
+
export { ArrayFeatureView, BigWigFeature } from "./array-feature-view.js";
|
|
6
6
|
//# sourceMappingURL=index.js.map
|
package/esm/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,+BAA+B,CAAA;AACtC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA"}
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,+BAA+B,CAAA;AACtC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAA"}
|
package/package.json
CHANGED
|
@@ -1,5 +1,41 @@
|
|
|
1
1
|
import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts'
|
|
2
2
|
|
|
3
|
+
export class BigWigFeature {
|
|
4
|
+
constructor(
|
|
5
|
+
private view: ArrayFeatureView,
|
|
6
|
+
private i: number,
|
|
7
|
+
) {}
|
|
8
|
+
|
|
9
|
+
get(key: 'refName' | 'source'): string
|
|
10
|
+
get(key: 'start' | 'end' | 'score'): number
|
|
11
|
+
get(key: 'minScore' | 'maxScore'): number | undefined
|
|
12
|
+
get(key: 'summary'): boolean
|
|
13
|
+
// eslint-disable-next-line @typescript-eslint/no-explicit-any
|
|
14
|
+
get(key: string): any
|
|
15
|
+
get(key: string) {
|
|
16
|
+
return this.view.get(this.i, key)
|
|
17
|
+
}
|
|
18
|
+
|
|
19
|
+
id() {
|
|
20
|
+
return this.view.id(this.i)
|
|
21
|
+
}
|
|
22
|
+
|
|
23
|
+
toJSON() {
|
|
24
|
+
const { view, i } = this
|
|
25
|
+
return {
|
|
26
|
+
start: view.start(i),
|
|
27
|
+
end: view.end(i),
|
|
28
|
+
score: view.score(i),
|
|
29
|
+
refName: view.refName,
|
|
30
|
+
source: view.source,
|
|
31
|
+
uniqueId: view.id(i),
|
|
32
|
+
summary: view.isSummary,
|
|
33
|
+
minScore: view.minScore(i),
|
|
34
|
+
maxScore: view.maxScore(i),
|
|
35
|
+
}
|
|
36
|
+
}
|
|
37
|
+
}
|
|
38
|
+
|
|
3
39
|
export class ArrayFeatureView {
|
|
4
40
|
public readonly starts: Int32Array
|
|
5
41
|
public readonly ends: Int32Array
|
package/src/index.ts
CHANGED
|
@@ -2,7 +2,7 @@ import './bigint-polyfill/polyfill.ts'
|
|
|
2
2
|
export { BigWig } from './bigwig.ts'
|
|
3
3
|
export { BigBed } from './bigbed.ts'
|
|
4
4
|
export { parseBigWig } from './parse-bigwig.ts'
|
|
5
|
-
export { ArrayFeatureView } from './array-feature-view.ts'
|
|
5
|
+
export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts'
|
|
6
6
|
export type {
|
|
7
7
|
BigWigFeatureArrays,
|
|
8
8
|
BigWigHeader,
|