@gmod/bbi 9.0.6 → 9.0.8

package/dist/array-feature-view.d.ts

@@ -1,4 +1,26 @@
 import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';
+export declare class BigWigFeature {
+    private view;
+    private i;
+    constructor(view: ArrayFeatureView, i: number);
+    get(key: 'refName' | 'source'): string;
+    get(key: 'start' | 'end' | 'score'): number;
+    get(key: 'minScore' | 'maxScore'): number | undefined;
+    get(key: 'summary'): boolean;
+    get(key: string): unknown;
+    id(): string;
+    toJSON(): {
+        start: number;
+        end: number;
+        score: number;
+        refName: string;
+        source: string;
+        uniqueId: string;
+        summary: boolean;
+        minScore: number | undefined;
+        maxScore: number | undefined;
+    };
+}
 export declare class ArrayFeatureView {
     readonly starts: Int32Array;
     readonly ends: Int32Array;

package/dist/array-feature-view.js

@@ -1,6 +1,35 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.ArrayFeatureView = void 0;
+exports.ArrayFeatureView = exports.BigWigFeature = void 0;
+class BigWigFeature {
+    view;
+    i;
+    constructor(view, i) {
+        this.view = view;
+        this.i = i;
+    }
+    get(key) {
+        return this.view.get(this.i, key);
+    }
+    id() {
+        return this.view.id(this.i);
+    }
+    toJSON() {
+        const { view, i } = this;
+        return {
+            start: view.start(i),
+            end: view.end(i),
+            score: view.score(i),
+            refName: view.refName,
+            source: view.source,
+            uniqueId: view.id(i),
+            summary: view.isSummary,
+            minScore: view.minScore(i),
+            maxScore: view.maxScore(i),
+        };
+    }
+}
+exports.BigWigFeature = BigWigFeature;
 class ArrayFeatureView {
     starts;
     ends;

package/dist/array-feature-view.js.map

@@ -1 +1 @@
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+{"version":3,"file":"array-feature-view.js","sourceRoot":"","sources":["../src/array-feature-view.ts"],"names":[],"mappings":";;;AAEA,MAAa,aAAa;IAEd;IACA;IAFV,YACU,IAAsB,EACtB,CAAS;QADT,SAAI,GAAJ,IAAI,CAAkB;QACtB,MAAC,GAAD,CAAC,CAAQ;IAChB,CAAC;IAOJ,GAAG,CAAC,GAAW;QACb,OAAO,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,EAAE,GAAG,CAAC,CAAA;IACnC,CAAC;IAED,EAAE;QACA,OAAO,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;IAC7B,CAAC;IAED,MAAM;QACJ,MAAM,EAAE,IAAI,EAAE,CAAC,EAAE,GAAG,IAAI,CAAA;QACxB,OAAO;YACL,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,GAAG,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;YAChB,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,QAAQ,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,SAAS;YACvB,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;YAC1B,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;SAC3B,CAAA;IACH,CAAC;CACF;AAjCD,sCAiCC;AAED,MAAa,gBAAgB;IACX,MAAM,CAAY;IAClB,IAAI,CAAY;IAChB,MAAM,CAAc;IACpB,SAAS,CAA0B;IACnC,SAAS,CAA0B;IACnC,SAAS,CAAS;IAC1B,OAAO,CAAQ;IACf,QAAQ,CAAQ;IAExB,YACE,MAAkD,EAClD,MAAc,EACd,OAAe;QAEf,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAA;QACvB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAA;QACjC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,OAAO,GAAG,MAAM,CAAA;QACrB,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAA;IACzB,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,MAAM,CAAC,MAAM,CAAA;IAC3B,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,OAAO,CAAA;IACrB,CAAC;IAED,IAAI,OAAO;QACT,OAAO,IAAI,CAAC,QAAQ,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,GAAG,CAAC,CAAS;QACX,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAE,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,EAAE,CAAC,CAAS;QACV,OAAO,GAAG,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAA;IAC7E,CAAC;IAUD,GAAG,CAAC,CAAS,EAAE,GAAW;QACxB,QAAQ,GAAG,EAAE,CAAC;YACZ,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,KAAK;gBACR,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACrB,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,QAAQ,CAAA;YACtB,KAAK,QAAQ;gBACX,OAAO,IAAI,CAAC,OAAO,CAAA;YACrB,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,SAAS,CAAA;YACvB;gBACE,OAAO,SAAS,CAAA;QACpB,CAAC;IACH,CAAC;CACF;AA3FD,4CA2FC"}

package/dist/index.d.ts

@@ -2,5 +2,5 @@ import './bigint-polyfill/polyfill.ts';
 export { BigWig } from './bigwig.ts';
 export { BigBed } from './bigbed.ts';
 export { parseBigWig } from './parse-bigwig.ts';
-export { ArrayFeatureView } from './array-feature-view.ts';
+export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts';
 export type { BigWigFeatureArrays, BigWigHeader, BigWigHeaderWithRefNames, Feature, RequestOptions, SummaryFeatureArrays, } from './types.ts';

package/dist/index.js

@@ -1,6 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.ArrayFeatureView = exports.parseBigWig = exports.BigBed = exports.BigWig = void 0;
+exports.BigWigFeature = exports.ArrayFeatureView = exports.parseBigWig = exports.BigBed = exports.BigWig = void 0;
 require("./bigint-polyfill/polyfill.js");
 var bigwig_ts_1 = require("./bigwig.js");
 Object.defineProperty(exports, "BigWig", { enumerable: true, get: function () { return bigwig_ts_1.BigWig; } });
@@ -10,4 +10,5 @@ var parse_bigwig_ts_1 = require("./parse-bigwig.js");
 Object.defineProperty(exports, "parseBigWig", { enumerable: true, get: function () { return parse_bigwig_ts_1.parseBigWig; } });
 var array_feature_view_ts_1 = require("./array-feature-view.js");
 Object.defineProperty(exports, "ArrayFeatureView", { enumerable: true, get: function () { return array_feature_view_ts_1.ArrayFeatureView; } });
+Object.defineProperty(exports, "BigWigFeature", { enumerable: true, get: function () { return array_feature_view_ts_1.BigWigFeature; } });
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;AAAA,yCAAsC;AACtC,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,qDAA+C;AAAtC,8GAAA,WAAW,OAAA;AACpB,iEAA0D;AAAjD,yHAAA,gBAAgB,OAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;AAAA,yCAAsC;AACtC,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,yCAAoC;AAA3B,mGAAA,MAAM,OAAA;AACf,qDAA+C;AAAtC,8GAAA,WAAW,OAAA;AACpB,iEAAyE;AAAhE,yHAAA,gBAAgB,OAAA;AAAE,sHAAA,aAAa,OAAA"}

package/dist/unzip.d.ts

@@ -9,9 +9,19 @@ export declare function unzipBatch(data: Uint8Array, blocks: {
 export declare function decompressAndParseBigWigBlocks(data: Uint8Array, blocks: {
     offset: number;
     length: number;
-}[], maxOutputSize: number, reqStart: number, reqEnd: number): Promise<import("./wasm/inflate-wasm-inlined.js").BigWigFeatureArrays>;
+}[], maxOutputSize: number, reqStart: number, reqEnd: number): Promise<{
+    starts: Int32Array<any>;
+    ends: Int32Array<any>;
+    scores: Float32Array<any>;
+}>;
 export declare function decompressAndParseSummaryBlocks(data: Uint8Array, blocks: {
     offset: number;
     length: number;
-}[], maxOutputSize: number, reqChrId: number, reqStart: number, reqEnd: number): Promise<import("./wasm/inflate-wasm-inlined.js").SummaryFeatureArrays>;
+}[], maxOutputSize: number, reqChrId: number, reqStart: number, reqEnd: number): Promise<{
+    starts: Int32Array<any>;
+    ends: Int32Array<any>;
+    scores: Float32Array<any>;
+    minScores: Float32Array<any>;
+    maxScores: Float32Array<any>;
+}>;
 export type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';

package/esm/array-feature-view.d.ts

@@ -1,4 +1,26 @@
 import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';
+export declare class BigWigFeature {
+    private view;
+    private i;
+    constructor(view: ArrayFeatureView, i: number);
+    get(key: 'refName' | 'source'): string;
+    get(key: 'start' | 'end' | 'score'): number;
+    get(key: 'minScore' | 'maxScore'): number | undefined;
+    get(key: 'summary'): boolean;
+    get(key: string): unknown;
+    id(): string;
+    toJSON(): {
+        start: number;
+        end: number;
+        score: number;
+        refName: string;
+        source: string;
+        uniqueId: string;
+        summary: boolean;
+        minScore: number | undefined;
+        maxScore: number | undefined;
+    };
+}
 export declare class ArrayFeatureView {
     readonly starts: Int32Array;
     readonly ends: Int32Array;

package/esm/array-feature-view.js

@@ -1,3 +1,31 @@
+export class BigWigFeature {
+    view;
+    i;
+    constructor(view, i) {
+        this.view = view;
+        this.i = i;
+    }
+    get(key) {
+        return this.view.get(this.i, key);
+    }
+    id() {
+        return this.view.id(this.i);
+    }
+    toJSON() {
+        const { view, i } = this;
+        return {
+            start: view.start(i),
+            end: view.end(i),
+            score: view.score(i),
+            refName: view.refName,
+            source: view.source,
+            uniqueId: view.id(i),
+            summary: view.isSummary,
+            minScore: view.minScore(i),
+            maxScore: view.maxScore(i),
+        };
+    }
+}
 export class ArrayFeatureView {
     starts;
     ends;

package/esm/array-feature-view.js.map

@@ -1 +1 @@
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+{"version":3,"file":"array-feature-view.js","sourceRoot":"","sources":["../src/array-feature-view.ts"],"names":[],"mappings":"AAEA,MAAM,OAAO,aAAa;IAEd;IACA;IAFV,YACU,IAAsB,EACtB,CAAS;QADT,SAAI,GAAJ,IAAI,CAAkB;QACtB,MAAC,GAAD,CAAC,CAAQ;IAChB,CAAC;IAOJ,GAAG,CAAC,GAAW;QACb,OAAO,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,EAAE,GAAG,CAAC,CAAA;IACnC,CAAC;IAED,EAAE;QACA,OAAO,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;IAC7B,CAAC;IAED,MAAM;QACJ,MAAM,EAAE,IAAI,EAAE,CAAC,EAAE,GAAG,IAAI,CAAA;QACxB,OAAO;YACL,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,GAAG,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;YAChB,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,QAAQ,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;YACpB,OAAO,EAAE,IAAI,CAAC,SAAS;YACvB,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;YAC1B,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;SAC3B,CAAA;IACH,CAAC;CACF;AAED,MAAM,OAAO,gBAAgB;IACX,MAAM,CAAY;IAClB,IAAI,CAAY;IAChB,MAAM,CAAc;IACpB,SAAS,CAA0B;IACnC,SAAS,CAA0B;IACnC,SAAS,CAAS;IAC1B,OAAO,CAAQ;IACf,QAAQ,CAAQ;IAExB,YACE,MAAkD,EAClD,MAAc,EACd,OAAe;QAEf,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAA;QACvB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAA;QAC3B,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAA;QACjC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;QAChE,IAAI,CAAC,OAAO,GAAG,MAAM,CAAA;QACrB,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAA;IACzB,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,MAAM,CAAC,MAAM,CAAA;IAC3B,CAAC;IAED,IAAI,MAAM;QACR,OAAO,IAAI,CAAC,OAAO,CAAA;IACrB,CAAC;IAED,IAAI,OAAO;QACT,OAAO,IAAI,CAAC,QAAQ,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,GAAG,CAAC,CAAS;QACX,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAE,CAAA;IACtB,CAAC;IAED,KAAK,CAAC,CAAS;QACb,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAE,CAAA;IACxB,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,QAAQ,CAAC,CAAS;QAChB,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;IAC5B,CAAC;IAED,EAAE,CAAC,CAAS;QACV,OAAO,GAAG,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAA;IAC7E,CAAC;IAUD,GAAG,CAAC,CAAS,EAAE,GAAW;QACxB,QAAQ,GAAG,EAAE,CAAC;YACZ,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,KAAK;gBACR,OAAO,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACrB,KAAK,OAAO;gBACV,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;YACvB,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,QAAQ,CAAA;YACtB,KAAK,QAAQ;gBACX,OAAO,IAAI,CAAC,OAAO,CAAA;YACrB,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,UAAU;gBACb,OAAO,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAA;YAC5B,KAAK,SAAS;gBACZ,OAAO,IAAI,CAAC,SAAS,CAAA;YACvB;gBACE,OAAO,SAAS,CAAA;QACpB,CAAC;IACH,CAAC;CACF"}

package/esm/index.d.ts

@@ -2,5 +2,5 @@ import './bigint-polyfill/polyfill.ts';
 export { BigWig } from './bigwig.ts';
 export { BigBed } from './bigbed.ts';
 export { parseBigWig } from './parse-bigwig.ts';
-export { ArrayFeatureView } from './array-feature-view.ts';
+export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts';
 export type { BigWigFeatureArrays, BigWigHeader, BigWigHeaderWithRefNames, Feature, RequestOptions, SummaryFeatureArrays, } from './types.ts';

package/esm/index.js

@@ -2,5 +2,5 @@ import "./bigint-polyfill/polyfill.js";
 export { BigWig } from "./bigwig.js";
 export { BigBed } from "./bigbed.js";
 export { parseBigWig } from "./parse-bigwig.js";
-export { ArrayFeatureView } from "./array-feature-view.js";
+export { ArrayFeatureView, BigWigFeature } from "./array-feature-view.js";
 //# sourceMappingURL=index.js.map

package/esm/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,+BAA+B,CAAA;AACtC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,+BAA+B,CAAA;AACtC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAA;AACpC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAA"}

package/esm/unzip.d.ts

@@ -9,9 +9,19 @@ export declare function unzipBatch(data: Uint8Array, blocks: {
 export declare function decompressAndParseBigWigBlocks(data: Uint8Array, blocks: {
     offset: number;
     length: number;
-}[], maxOutputSize: number, reqStart: number, reqEnd: number): Promise<import("./wasm/inflate-wasm-inlined.js").BigWigFeatureArrays>;
+}[], maxOutputSize: number, reqStart: number, reqEnd: number): Promise<{
+    starts: Int32Array<any>;
+    ends: Int32Array<any>;
+    scores: Float32Array<any>;
+}>;
 export declare function decompressAndParseSummaryBlocks(data: Uint8Array, blocks: {
     offset: number;
     length: number;
-}[], maxOutputSize: number, reqChrId: number, reqStart: number, reqEnd: number): Promise<import("./wasm/inflate-wasm-inlined.js").SummaryFeatureArrays>;
+}[], maxOutputSize: number, reqChrId: number, reqStart: number, reqEnd: number): Promise<{
+    starts: Int32Array<any>;
+    ends: Int32Array<any>;
+    scores: Float32Array<any>;
+    minScores: Float32Array<any>;
+    maxScores: Float32Array<any>;
+}>;
 export type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts';

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@gmod/bbi",
-  "version": "9.0.6",
+  "version": "9.0.8",
   "description": "Parser for BigWig/BigBed files",
   "license": "MIT",
   "repository": {

package/src/array-feature-view.ts

@@ -1,5 +1,40 @@
 import type { BigWigFeatureArrays, SummaryFeatureArrays } from './types.ts'
 
+export class BigWigFeature {
+  constructor(
+    private view: ArrayFeatureView,
+    private i: number,
+  ) {}
+
+  get(key: 'refName' | 'source'): string
+  get(key: 'start' | 'end' | 'score'): number
+  get(key: 'minScore' | 'maxScore'): number | undefined
+  get(key: 'summary'): boolean
+  get(key: string): unknown
+  get(key: string) {
+    return this.view.get(this.i, key)
+  }
+
+  id() {
+    return this.view.id(this.i)
+  }
+
+  toJSON() {
+    const { view, i } = this
+    return {
+      start: view.start(i),
+      end: view.end(i),
+      score: view.score(i),
+      refName: view.refName,
+      source: view.source,
+      uniqueId: view.id(i),
+      summary: view.isSummary,
+      minScore: view.minScore(i),
+      maxScore: view.maxScore(i),
+    }
+  }
+}
+
 export class ArrayFeatureView {
   public readonly starts: Int32Array
   public readonly ends: Int32Array

package/src/index.ts

@@ -2,7 +2,7 @@ import './bigint-polyfill/polyfill.ts'
 export { BigWig } from './bigwig.ts'
 export { BigBed } from './bigbed.ts'
 export { parseBigWig } from './parse-bigwig.ts'
-export { ArrayFeatureView } from './array-feature-view.ts'
+export { ArrayFeatureView, BigWigFeature } from './array-feature-view.ts'
 export type {
   BigWigFeatureArrays,
   BigWigHeader,

package/src/wasm/inflate-wasm-inlined.d.ts

@@ -1,49 +0,0 @@
-export function inflateRaw(
-  input: Uint8Array,
-  outputSize: number,
-): Promise<Uint8Array>
-export function inflateRawUnknownSize(input: Uint8Array): Promise<Uint8Array>
-
-export interface BatchResult {
-  data: Uint8Array
-  offsets: number[]
-}
-export function inflateRawBatch(
-  inputs: Uint8Array,
-  inputOffsets: Uint32Array,
-  inputLengths: Uint32Array,
-  maxOutputSize: number,
-): Promise<BatchResult>
-
-export interface BigWigFeatureArrays {
-  starts: Int32Array
-  ends: Int32Array
-  scores: Float32Array
-}
-
-export interface SummaryFeatureArrays {
-  starts: Int32Array
-  ends: Int32Array
-  scores: Float32Array
-  minScores: Float32Array
-  maxScores: Float32Array
-}
-
-export function decompressAndParseBigWig(
-  inputs: Uint8Array,
-  inputOffsets: Uint32Array,
-  inputLengths: Uint32Array,
-  maxBlockSize: number,
-  reqStart: number,
-  reqEnd: number,
-): Promise<BigWigFeatureArrays>
-
-export function decompressAndParseSummary(
-  inputs: Uint8Array,
-  inputOffsets: Uint32Array,
-  inputLengths: Uint32Array,
-  maxBlockSize: number,
-  reqChrId: number,
-  reqStart: number,
-  reqEnd: number,
-): Promise<SummaryFeatureArrays>