@gmod/bbi 8.1.2 → 9.0.3

package/CHANGELOG.md

@@ -1,350 +0,0 @@
-## [8.1.2](https://github.com/GMOD/bbi-js/compare/v8.1.1...v8.1.2) (2026-03-20)
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-## [8.1.1](https://github.com/GMOD/bbi-js/compare/v8.1.0...v8.1.1) (2026-01-06)
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-# [8.1.0](https://github.com/GMOD/bbi-js/compare/v8.0.4...v8.1.0) (2025-12-25)
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-## [8.0.4](https://github.com/GMOD/bbi-js/compare/v8.0.3...v8.0.4) (2025-12-17)
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-## [8.0.3](https://github.com/GMOD/bbi-js/compare/v8.0.2...v8.0.3) (2025-12-16)
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-## [8.0.2](https://github.com/GMOD/bbi-js/compare/v8.0.1...v8.0.2) (2025-12-16)
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-## [8.0.1](https://github.com/GMOD/bbi-js/compare/v8.0.0...v8.0.1) (2025-12-16)
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-# [8.0.0](https://github.com/GMOD/bbi-js/compare/v7.1.0...v8.0.0) (2025-12-11)
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-# [7.1.0](https://github.com/GMOD/bbi-js/compare/v7.0.5...v7.1.0) (2025-11-09)
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-## [7.0.5](https://github.com/GMOD/bbi-js/compare/v7.0.4...v7.0.5) (2025-06-10)
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-## [7.0.4](https://github.com/GMOD/bbi-js/compare/v7.0.3...v7.0.4) (2025-06-07)
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-## [7.0.3](https://github.com/GMOD/bbi-js/compare/v7.0.2...v7.0.3) (2025-05-16)
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-## [7.0.2](https://github.com/GMOD/bbi-js/compare/v7.0.1...v7.0.2) (2025-05-13)
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-## [7.0.2](https://github.com/GMOD/bbi-js/compare/v7.0.1...v7.0.2) (2025-05-13)
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-## [7.0.1](https://github.com/GMOD/bbi-js/compare/v7.0.0...v7.0.1) (2025-04-30)
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-# [7.0.0](https://github.com/GMOD/bbi-js/compare/v6.0.3...v7.0.0) (2025-04-30)
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-## [6.0.3](https://github.com/GMOD/bbi-js/compare/v6.0.2...v6.0.3) (2025-04-11)
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-## [6.0.2](https://github.com/GMOD/bbi-js/compare/v6.0.1...v6.0.2) (2025-03-18)
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-## [6.0.1](https://github.com/GMOD/bbi-js/compare/v6.0.0...v6.0.1) (2024-12-12)
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-# [6.0.0](https://github.com/GMOD/bbi-js/compare/v5.0.2...v6.0.0) (2024-12-12)
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-## [5.0.2](https://github.com/GMOD/bbi-js/compare/v5.0.1...v5.0.2) (2024-09-03)
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-## [5.0.1](https://github.com/GMOD/bbi-js/compare/v5.0.0...v5.0.1) (2024-08-09)
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-# [5.0.0](https://github.com/GMOD/bbi-js/compare/v4.0.6...v5.0.0) (2024-08-09)
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-## [4.0.6](https://github.com/GMOD/bbi-js/compare/v4.0.5...v4.0.6) (2024-07-23)
-
-- Use renamed abortable-promise-cache -> @gmod/abortable-promise-cache
-
-## [4.0.5](https://github.com/GMOD/bbi-js/compare/v4.0.4...v4.0.5) (2024-06-19)
-
-- Improved linting
-
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-## [4.0.4](https://github.com/GMOD/bbi-js/compare/v4.0.3...v4.0.4) (2024-3-5)
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-
-
-- Fix issue fetching data from file where refNames are not sorted (#59)
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-## [4.0.3](https://github.com/GMOD/bbi-js/compare/v4.0.2...v4.0.3) (2024-01-16)
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-### Performance Improvements
-
-- optimize `parseBigBedBlock` ([#58](https://github.com/GMOD/bbi-js/issues/58))
-  ([eb3f7a4](https://github.com/GMOD/bbi-js/commit/eb3f7a4885c4e8262c6e3e63696b533e53072463))
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-* Small perf improvement (#58)
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-## [4.0.2](https://github.com/GMOD/bbi-js/compare/v4.0.1...v4.0.2) (2023-07-30)
-
-- Fix issue with fetching headers that are large in certain cases
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-## [4.0.1](https://github.com/GMOD/bbi-js/compare/v4.0.0...v4.0.1) (2023-07-13)
-
-- Fix eslint plugin being in dependencies Accidentally
-
-# [4.0.0](https://github.com/GMOD/bbi-js/compare/v3.0.1...v4.0.0) (2023-05-05)
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-- Improve typescripting, refactoring
-- Options argument only accepts {signal}, not just signal now
-
-## [3.0.1](https://github.com/GMOD/bbi-js/compare/v3.0.0...v3.0.1) (2023-04-21)
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-### Features
-
-- explicit buffer import ([#53](https://github.com/GMOD/bbi-js/issues/53))
-  ([2699c98](https://github.com/GMOD/bbi-js/commit/2699c983dea380bbb56773058ba3f233c833d9c8))
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-* Add explicit Buffer import
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-# [3.0.0](https://github.com/GMOD/bbi-js/compare/v2.0.5...v3.0.0) (2023-01-11)
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-- Update to rxjs 7
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-## [2.0.5](https://github.com/GMOD/bbi-js/compare/v2.0.4...v2.0.5) (2022-12-17)
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-- Cleanup package.json and README
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-## [2.0.4](https://github.com/GMOD/bbi-js/compare/v2.0.3...v2.0.4) (2022-10-15)
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-- Use plain TextDecoder for decoding autoSql
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-## [2.0.3](https://github.com/GMOD/bbi-js/compare/v2.0.2...v2.0.3) (2022-10-10)
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-- Add BigInt64 polyfill for older safari
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-## [2.0.2](https://github.com/GMOD/bbi-js/compare/v2.0.1...v2.0.2) (2022-07-18)
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-- Make basesCovered a number instead of BigInt
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-## [2.0.1](https://github.com/GMOD/bbi-js/compare/v2.0.0...v2.0.1) (2022-07-18)
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-- Bump generic-filehandle 2->3
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-# [2.0.0](https://github.com/GMOD/bbi-js/compare/v1.0.35...v2.0.0) (2022-07-18)
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-- Use binary-parser instead of @gmod/binary-parser, with some optimizations.
-  This uses BigInt and TextDecoder, so requires a major version bump
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-## [1.0.35](https://github.com/GMOD/bbi-js/compare/v1.0.34...v1.0.35) (2022-04-22)
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-- Produce actual ESM module for the "module" field in package.json, was commonJS
-- Add sourceMap:true to tsconfig
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-## [1.0.34](https://github.com/GMOD/bbi-js/compare/v1.0.33...v1.0.34) (2022-03-11)
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-### Reverts
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-- Revert "Use subarray instead of slice since slice is deprecated under node
-  xref 'https://nodejs.org/api/buffer.html#bufslicestart-end'"
-  ([44116cc](https://github.com/GMOD/bbi-js/commit/44116cce54601727d37f1c449bfcc60c1b4e602d))
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-* Back to slice instead of subarray, as subarray returned a UInt8Array instead
-  of a true Buffer
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-## [1.0.33](https://github.com/GMOD/bbi-js/compare/v1.0.32...v1.0.33) (2022-02-25)
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-- Use subarray instead of slice since slice is deprecated under node xref
-  'https://nodejs.org/api/buffer.html#bufslicestart-end'"
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-## [1.0.32](https://github.com/GMOD/bbi-js/compare/v1.0.31...v1.0.32) (2022-02-16)
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-- Use pako to decode on command line instead of using zlib to avoid need to
-  manually polyfill zlib
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-## [1.0.31](https://github.com/GMOD/bbi-js/compare/v1.0.30...v1.0.31) (2021-12-14)
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-- Add esm module builds with less babelification for smaller bundle sizes
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-## [1.0.30](https://github.com/GMOD/bbi-js/compare/v1.0.29...v1.0.30) (2020-06-25)
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-- Use abortable-promise-cache instead of abortable-memoize
-- Allow opts parameter to getHeader instead of just abortsignal
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-## [1.0.29](https://github.com/GMOD/bbi-js/compare/v1.0.28...v1.0.29) (2020-01-28)
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-- Accidentally made the package include itself as dependency in 1.0.28,
-  republish
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-## [1.0.28](https://github.com/GMOD/bbi-js/compare/v1.0.27...v1.0.28) (2020-01-28)
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-- Change typescript interface to use object keys instead of Map type for
-  refsByName, refsById
-- Typescript only release change
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-## [1.0.27](https://github.com/GMOD/bbi-js/compare/v1.0.26...v1.0.27) (2020-01-10)
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-- Reduce number of requests needed on initial header
-- Add definedFieldCount to the returned Header
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-Thanks to @skinner for both of these contributions!
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-## [1.0.26](https://github.com/GMOD/bbi-js/compare/v1.0.25...v1.0.26) (2019-11-10)
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-- Fix important bug with fixed step bigwig files not using the proper start
-  coordinate
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-## [1.0.25](https://github.com/GMOD/bbi-js/compare/v1.0.24...v1.0.25) (2019-11-03)
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-- Add fix for files with a large header, if autoSql is large in a bigbed file
-  would be likely scenario
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-## [1.0.24](https://github.com/GMOD/bbi-js/compare/v1.0.23...v1.0.24) (2019-10-29)
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-- Fix the uniqueIds generated via the bigbed features
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-## [1.0.23](https://github.com/GMOD/bbi-js/compare/v1.0.22...v1.0.23) (2019-10-06)
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-- Small refactor of `filehandle.read()` to make it more robust
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-## [1.0.22](https://github.com/GMOD/bbi-js/compare/v1.0.21...v1.0.22) (2019-06-13)
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-- Bump generic-filehandle
-- Add more checks for abort signal to allow early bailing
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-## [1.0.21](https://github.com/GMOD/bbi-js/compare/v1.0.20...v1.0.21) (2019-05-09)
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-- Add fix for reading files with greater than 256 contigs
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-## [1.0.20](https://github.com/GMOD/bbi-js/compare/v1.0.19...v1.0.20) (2019-05-06)
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-- Add fix that prevented accessing the lowest zoom/reduction level
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-## [1.0.19](https://github.com/GMOD/bbi-js/compare/v1.0.18...v1.0.19) (2019-05-02)
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-- Add regression fix since 1.0.16 for uncompressed files. Thanks to @lidaof for
-  reporting!
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-## [1.0.18](https://github.com/GMOD/bbi-js/compare/v1.0.17...v1.0.18) (2019-05-02)
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-- Improve error handling of the observables (issue #20, pull #21)
-- Bump generic-filehandle to 1.0.9 to fix compatibility with native browser
-  fetch
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-## [1.0.17](https://github.com/GMOD/bbi-js/compare/v1.0.16...v1.0.17) (2019-04-30)
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-- Use some standard rxjs notions for combining operator results
-- Add parsing of the extraIndex data in BigBed, allowing you to call
-  bigbed.searchExtraIndex(name[,opts])
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-## [1.0.16](https://github.com/GMOD/bbi-js/compare/v1.0.15...v1.0.16) (2019-04-23)
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-- Pre-compile binary-parser instances for faster
-- Important: fixed bug that caused bigwig summary blocks to not be returned in
-  output
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-## [1.0.15](https://github.com/GMOD/bbi-js/compare/v1.0.14...v1.0.15) (2019-04-18)
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-- Make important performance improvement for BigWig data
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-## [1.0.14](https://github.com/GMOD/bbi-js/compare/v1.0.12...v1.0.14) (2019-04-17)
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-- Improve documentation for integration with @gmod/bed@2
-- Fix some cases where abortSignal was passed incorrectly to filehandle
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-## [1.0.13](https://github.com/GMOD/bbi-js/compare/v1.0.12...v1.0.13) (2019-04-14)
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-- Added uniqueId to objects returned from BigBed to avoid issue with duplicates
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-## [1.0.12](https://github.com/GMOD/bbi-js/compare/v1.0.11...v1.0.12) (2019-04-12)
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-- Fix returning bigbed objects on empty regions
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-## [1.0.11](https://github.com/GMOD/bbi-js/compare/v1.0.10...v1.0.11) (2019-04-10)
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-- Removed polyfill of Array.prototype.flat which modifies global scope
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-## [1.0.10](https://github.com/GMOD/bbi-js/compare/v1.0.9...v1.0.10) (2019-04-09)
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-- Fix misinterpretation of variable step wig files in this module (the span is
-  not variable in variable step files, only the step, use bedGraphToBigWig for
-  variable span)
-- Improved docs
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-## [1.0.9](https://github.com/GMOD/bbi-js/compare/v1.0.8...v1.0.9) (2019-04-05)
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-- Added caching of networking requests (thanks @rbuels for the
-  abortable-promise-cache module!)
-- Fix some type errors on the range class
-- Correct using span on fixed size wiggle types
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-## [1.0.8](https://github.com/GMOD/bbi-js/compare/v1.0.7...v1.0.8) (2019-04-01)
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-- Fix @babel/runtime in deployed package
-- Bugfix to the url argument to the BigWig/BigBed
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-## [1.0.7](https://github.com/GMOD/bbi-js/compare/v1.0.6...v1.0.7) (2019-04-01)
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-- Added getFeatureStream which returns an Observable from rxjs
-- Added url option to BigWig and BigBed constructors to allow usage of
-  RemoteFile filehandle
-- Added typescript backend for better processing
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-## [1.0.6](https://github.com/GMOD/bbi-js/compare/v1.0.5...v1.0.6) (2019-03-15)
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-- Fix issue with fixed step and variable step bigwig files not working at all
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-## [1.0.5](https://github.com/GMOD/bbi-js/compare/v1.0.4...v1.0.5) (2019-03-07)
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-- Fix issue with jest being in deps instead of devDeps
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-## [1.0.4](https://github.com/GMOD/bbi-js/compare/v1.0.3...v1.0.4) (2019-01-28)
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-- Add renameRefSeqs functionality where you can apply a callback to the refseq
-  names
-- Consistently apply start/end coordinate filters at different zoom levels
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-## [1.0.3](https://github.com/GMOD/bbi-js/compare/v1.0.2...v1.0.3) (2019-01-27)
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-- Fix issue with properly inflating chunks (issue #1)
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-## [1.0.2](https://github.com/GMOD/bbi-js/compare/v1.0.1...v1.0.2) (2019-01-24)
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-- Added regenerator-runtime to babel dist compilation
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-## [1.0.1](https://github.com/GMOD/bbi-js/compare/v1.0.0...v1.0.1) (2019-01-24)
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-- Added exports for BigWig and BigBed. const {BigWig, BigBed} =
-  require('@gmod/bbi')
-
-# 1.0.0 (2019-01-23)
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-- Initial version
-- Has support for bigwig and bigbed files