@gmod/bam 5.0.6 → 6.0.0

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Files changed (74) hide show
  1. package/CHANGELOG.md +5 -1
  2. package/dist/bai.d.ts +4 -4
  3. package/dist/bai.js +16 -17
  4. package/dist/bai.js.map +1 -1
  5. package/dist/bamFile.d.ts +6 -7
  6. package/dist/bamFile.js +27 -46
  7. package/dist/bamFile.js.map +1 -1
  8. package/dist/chunk.d.ts +1 -1
  9. package/dist/chunk.js +0 -5
  10. package/dist/chunk.js.map +1 -1
  11. package/dist/csi.d.ts +4 -4
  12. package/dist/csi.js +22 -19
  13. package/dist/csi.js.map +1 -1
  14. package/dist/htsget.d.ts +4 -4
  15. package/dist/htsget.js +7 -9
  16. package/dist/htsget.js.map +1 -1
  17. package/dist/index.d.ts +5 -5
  18. package/dist/index.js +10 -10
  19. package/dist/index.js.map +1 -1
  20. package/dist/indexFile.d.ts +2 -6
  21. package/dist/indexFile.js +0 -6
  22. package/dist/indexFile.js.map +1 -1
  23. package/dist/nullIndex.d.ts +1 -1
  24. package/dist/nullIndex.js +2 -2
  25. package/dist/nullIndex.js.map +1 -1
  26. package/dist/record.js +57 -46
  27. package/dist/record.js.map +1 -1
  28. package/dist/util.d.ts +2 -2
  29. package/dist/util.js +2 -2
  30. package/dist/util.js.map +1 -1
  31. package/dist/virtualOffset.js +0 -2
  32. package/dist/virtualOffset.js.map +1 -1
  33. package/esm/bai.d.ts +4 -4
  34. package/esm/bai.js +4 -5
  35. package/esm/bai.js.map +1 -1
  36. package/esm/bamFile.d.ts +6 -7
  37. package/esm/bamFile.js +12 -31
  38. package/esm/bamFile.js.map +1 -1
  39. package/esm/chunk.d.ts +1 -1
  40. package/esm/chunk.js +0 -5
  41. package/esm/chunk.js.map +1 -1
  42. package/esm/csi.d.ts +4 -4
  43. package/esm/csi.js +15 -12
  44. package/esm/csi.js.map +1 -1
  45. package/esm/htsget.d.ts +4 -4
  46. package/esm/htsget.js +3 -5
  47. package/esm/htsget.js.map +1 -1
  48. package/esm/index.d.ts +5 -5
  49. package/esm/index.js +5 -5
  50. package/esm/index.js.map +1 -1
  51. package/esm/indexFile.d.ts +2 -6
  52. package/esm/indexFile.js +0 -6
  53. package/esm/indexFile.js.map +1 -1
  54. package/esm/nullIndex.d.ts +1 -1
  55. package/esm/nullIndex.js +1 -1
  56. package/esm/nullIndex.js.map +1 -1
  57. package/esm/record.js +47 -35
  58. package/esm/record.js.map +1 -1
  59. package/esm/util.d.ts +2 -2
  60. package/esm/util.js +1 -1
  61. package/esm/util.js.map +1 -1
  62. package/esm/virtualOffset.js +0 -2
  63. package/esm/virtualOffset.js.map +1 -1
  64. package/package.json +17 -11
  65. package/src/bai.ts +9 -4
  66. package/src/bamFile.ts +18 -39
  67. package/src/chunk.ts +1 -1
  68. package/src/csi.ts +11 -9
  69. package/src/htsget.ts +7 -4
  70. package/src/index.ts +5 -5
  71. package/src/indexFile.ts +2 -6
  72. package/src/nullIndex.ts +1 -1
  73. package/src/record.ts +1 -1
  74. package/src/util.ts +3 -3
package/src/record.ts CHANGED
@@ -1,4 +1,4 @@
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- import Constants from './constants'
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+ import Constants from './constants.ts'
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2
 
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  const SEQRET_DECODER = '=ACMGRSVTWYHKDBN'.split('')
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  const CIGAR_DECODER = 'MIDNSHP=X???????'.split('')
package/src/util.ts CHANGED
@@ -1,6 +1,6 @@
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- import Chunk from './chunk'
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- import { longFromBytesToUnsigned } from './long'
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- import { Offset, VirtualOffset } from './virtualOffset'
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+ import Chunk from './chunk.ts'
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+ import { longFromBytesToUnsigned } from './long.ts'
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+ import { Offset, VirtualOffset } from './virtualOffset.ts'
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  export function timeout(ms: number) {
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  return new Promise(resolve => setTimeout(resolve, ms))