@ggterm/core 0.2.17 → 0.3.0

package/dist/geoms/biplot.d.ts

@@ -0,0 +1,35 @@
+/**
+ * PCA Biplot Geometry
+ *
+ * Visualizes PCA (Principal Component Analysis) results showing both samples
+ * (scores) and variables (loadings) in the same plot. Useful for understanding
+ * relationships between samples and which variables drive the separation.
+ */
+import type { Geom } from '../types';
+export interface BiplotOptions {
+    pc1_col?: string;
+    pc2_col?: string;
+    loadings?: Array<{
+        variable: string;
+        pc1: number;
+        pc2: number;
+    }>;
+    var_explained?: [number, number];
+    show_scores?: boolean;
+    score_color?: string;
+    score_size?: number;
+    score_alpha?: number;
+    score_char?: string;
+    show_score_labels?: boolean;
+    show_loadings?: boolean;
+    loading_color?: string;
+    loading_scale?: number;
+    arrow_char?: string;
+    show_loading_labels?: boolean;
+    show_origin?: boolean;
+    origin_color?: string;
+    show_circle?: boolean;
+    circle_color?: string;
+}
+export declare function geom_biplot(options?: BiplotOptions): Geom;
+//# sourceMappingURL=biplot.d.ts.map

package/dist/geoms/biplot.d.ts.map

@@ -0,0 +1 @@
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package/dist/geoms/bland-altman.d.ts

@@ -0,0 +1,50 @@
+/**
+ * Bland-Altman Plot Geom
+ *
+ * Creates Bland-Altman plots (difference plots) for method comparison.
+ * Used to assess agreement between two measurement methods.
+ *
+ * Plots the difference between methods against their mean.
+ * Shows mean difference (bias) and limits of agreement (±1.96 SD).
+ *
+ * Expected data format:
+ * - method1: Measurements from first method
+ * - method2: Measurements from second method
+ * OR pre-computed:
+ * - mean: Mean of two methods ((method1 + method2) / 2)
+ * - diff: Difference between methods (method1 - method2)
+ *
+ * @example
+ * ```typescript
+ * gg(comparisonData)
+ *   .aes({ x: 'method1', y: 'method2' })
+ *   .geom(geom_bland_altman({ show_limits: true, show_bias: true }))
+ * ```
+ */
+import type { Geom } from '../types';
+export interface BlandAltmanOptions {
+    /** Show limits of agreement lines (default: true) */
+    show_limits?: boolean;
+    /** Show mean bias line (default: true) */
+    show_bias?: boolean;
+    /** Multiplier for limits of agreement (default: 1.96 for 95% limits) */
+    limit_multiplier?: number;
+    /** Color for bias line (default: '#0000ff') */
+    bias_color?: string;
+    /** Color for limit lines (default: '#ff0000') */
+    limit_color?: string;
+    /** Line style for reference lines (default: 'dashed') */
+    linetype?: 'solid' | 'dashed' | 'dotted';
+    /** Show confidence intervals for limits (default: false) */
+    show_ci?: boolean;
+    /** Confidence level (default: 0.95) */
+    conf_level?: number;
+    /** Point character (default: '●') */
+    point_char?: string;
+    /** Show percentage difference instead of absolute (default: false) */
+    percent_diff?: boolean;
+    /** Data is pre-computed mean/diff format (default: false) */
+    precomputed?: boolean;
+}
+export declare function geom_bland_altman(options?: BlandAltmanOptions): Geom;
+//# sourceMappingURL=bland-altman.d.ts.map

package/dist/geoms/bland-altman.d.ts.map

@@ -0,0 +1 @@
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package/dist/geoms/control.d.ts

@@ -0,0 +1,118 @@
+/**
+ * Control Chart (Shewhart Chart) Geometry
+ *
+ * Creates statistical process control charts showing data points
+ * with control limits (UCL, LCL) and center line.
+ *
+ * @example
+ * // Basic control chart
+ * gg(data)
+ *   .aes({ x: 'sample', y: 'measurement' })
+ *   .geom(geom_control())
+ *
+ * @example
+ * // Control chart with custom limits
+ * gg(data)
+ *   .aes({ x: 'sample', y: 'measurement' })
+ *   .geom(geom_control({ sigma: 2 }))
+ *
+ * @example
+ * // X-bar chart for subgroup means
+ * gg(data)
+ *   .aes({ x: 'sample', y: 'measurement' })
+ *   .geom(geom_control({ chart_type: 'xbar' }))
+ */
+import type { Geom } from '../types';
+export interface ControlOptions {
+    /**
+     * Type of control chart
+     * - 'i': Individual measurements (I-chart)
+     * - 'xbar': Subgroup means (X-bar chart)
+     * - 'r': Range chart
+     * - 's': Standard deviation chart
+     * - 'p': Proportion chart
+     * - 'c': Count chart
+     * @default 'i'
+     */
+    chart_type?: 'i' | 'xbar' | 'r' | 's' | 'p' | 'c';
+    /**
+     * Number of standard deviations for control limits
+     * @default 3
+     */
+    sigma?: number;
+    /**
+     * Show center line (mean/target)
+     * @default true
+     */
+    show_center?: boolean;
+    /**
+     * Show upper control limit
+     * @default true
+     */
+    show_ucl?: boolean;
+    /**
+     * Show lower control limit
+     * @default true
+     */
+    show_lcl?: boolean;
+    /**
+     * Show warning limits (typically at 2 sigma)
+     * @default false
+     */
+    show_warning?: boolean;
+    /**
+     * Custom center line value (if not computed from data)
+     * @default undefined
+     */
+    center?: number;
+    /**
+     * Custom UCL value
+     * @default undefined
+     */
+    ucl?: number;
+    /**
+     * Custom LCL value
+     * @default undefined
+     */
+    lcl?: number;
+    /**
+     * Color for center line
+     * @default '#0000ff'
+     */
+    center_color?: string;
+    /**
+     * Color for control limits
+     * @default '#ff0000'
+     */
+    limit_color?: string;
+    /**
+     * Color for warning limits
+     * @default '#ffa500'
+     */
+    warning_color?: string;
+    /**
+     * Connect points with lines
+     * @default true
+     */
+    connect_points?: boolean;
+    /**
+     * Highlight out-of-control points
+     * @default true
+     */
+    highlight_ooc?: boolean;
+    /**
+     * Character for out-of-control points
+     * @default '◆'
+     */
+    ooc_char?: string;
+    /**
+     * Point character
+     * @default '●'
+     */
+    point_char?: string;
+}
+/**
+ * Create a control chart geometry
+ */
+export declare function geom_control(options?: ControlOptions): Geom;
+//# sourceMappingURL=control.d.ts.map

package/dist/geoms/control.d.ts.map

@@ -0,0 +1 @@
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package/dist/geoms/dendrogram.d.ts

@@ -0,0 +1,74 @@
+/**
+ * Dendrogram Geom
+ *
+ * Hierarchical tree visualization for clustering results, phylogenetics, etc.
+ * Supports both pre-computed dendrograms and automatic hierarchical clustering.
+ *
+ * Data format options:
+ * 1. Linkage matrix: Standard hierarchical clustering output
+ *    [{ merge1: idx1, merge2: idx2, height: h, size: n }, ...]
+ * 2. Newick format: Phylogenetic tree string in 'newick' column
+ * 3. Parent-child: { id, parent, height? } format
+ *
+ * @example
+ * // Linkage matrix format
+ * const linkage = [
+ *   { merge1: 0, merge2: 1, height: 0.5, size: 2 },
+ *   { merge1: 2, merge2: 3, height: 1.0, size: 2 },
+ *   { merge1: 4, merge2: 5, height: 2.0, size: 4 },
+ * ]
+ * gg(linkage).geom(geom_dendrogram({ labels: ['A', 'B', 'C', 'D'] }))
+ *
+ * @example
+ * // Parent-child format
+ * const tree = [
+ *   { id: 'root', parent: null, height: 3 },
+ *   { id: 'A', parent: 'node1', height: 0 },
+ *   { id: 'B', parent: 'node1', height: 0 },
+ *   { id: 'node1', parent: 'root', height: 1 },
+ * ]
+ * gg(tree).aes({ x: 'id', y: 'height' }).geom(geom_dendrogram())
+ */
+import type { Geom } from '../types';
+export interface DendrogramOptions {
+    /** Orientation: 'vertical' (root at top) or 'horizontal' (root at left) */
+    orientation?: 'vertical' | 'horizontal';
+    /** Leaf labels (for linkage matrix format) */
+    labels?: string[];
+    /** Show leaf labels */
+    show_labels?: boolean;
+    /** Hang leaves at same level (vs proportional to height) */
+    hang?: boolean;
+    /** Cut height for coloring clusters */
+    cut_height?: number;
+    /** Number of clusters to highlight (alternative to cut_height) */
+    k?: number;
+    /** Branch line character */
+    branch_char?: string;
+    /** Horizontal connector character */
+    h_connector?: string;
+    /** Vertical connector character */
+    v_connector?: string;
+    /** Corner characters */
+    corner_tl?: string;
+    corner_tr?: string;
+    corner_bl?: string;
+    corner_br?: string;
+    /** Leaf character */
+    leaf_char?: string;
+    /** Colors for different clusters */
+    cluster_colors?: string[];
+    /** Line style: 'square' (default) or 'diagonal' */
+    line_style?: 'square' | 'diagonal';
+    /** Column containing parent references */
+    parent_col?: string;
+    /** Column containing node heights */
+    height_col?: string;
+    /** Column containing node IDs */
+    id_col?: string;
+}
+/**
+ * Create a dendrogram geom for hierarchical tree visualization
+ */
+export declare function geom_dendrogram(options?: DendrogramOptions): Geom;
+//# sourceMappingURL=dendrogram.d.ts.map

package/dist/geoms/dendrogram.d.ts.map

@@ -0,0 +1 @@
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package/dist/geoms/ecdf.d.ts

@@ -0,0 +1,66 @@
+/**
+ * Empirical Cumulative Distribution Function Geometry
+ *
+ * Creates ECDF plots showing the proportion of data at or below each value.
+ *
+ * @example
+ * // Basic ECDF
+ * gg(data)
+ *   .aes({ x: 'values' })
+ *   .geom(geom_ecdf())
+ *
+ * @example
+ * // ECDF with confidence band
+ * gg(data)
+ *   .aes({ x: 'values' })
+ *   .geom(geom_ecdf({ show_ci: true }))
+ *
+ * @example
+ * // Multiple ECDFs by group
+ * gg(data)
+ *   .aes({ x: 'values', color: 'group' })
+ *   .geom(geom_ecdf())
+ */
+import type { Geom } from '../types';
+export interface ECDFOptions {
+    /**
+     * Pad the ECDF to [0, 1] range on y-axis
+     * @default true
+     */
+    pad?: boolean;
+    /**
+     * Show confidence band (Dvoretzky-Kiefer-Wolfowitz inequality)
+     * @default false
+     */
+    show_ci?: boolean;
+    /**
+     * Confidence level for CI band
+     * @default 0.95
+     */
+    conf_level?: number;
+    /**
+     * Step type for the ECDF
+     * @default 'post'
+     */
+    step_type?: 'pre' | 'post' | 'mid';
+    /**
+     * Show points at each step
+     * @default false
+     */
+    show_points?: boolean;
+    /**
+     * Line character for steps
+     * @default '─'
+     */
+    line_char?: string;
+    /**
+     * Complement (1 - ECDF) for survival-style plot
+     * @default false
+     */
+    complement?: boolean;
+}
+/**
+ * Create an ECDF geometry
+ */
+export declare function geom_ecdf(options?: ECDFOptions): Geom;
+//# sourceMappingURL=ecdf.d.ts.map

package/dist/geoms/ecdf.d.ts.map

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package/dist/geoms/forest.d.ts

@@ -0,0 +1,45 @@
+/**
+ * Forest Plot Geom
+ *
+ * Creates forest plots for meta-analysis visualization.
+ * Shows effect sizes with confidence intervals across multiple studies.
+ *
+ * Expected data format:
+ * - study: Study identifier/name
+ * - estimate: Point estimate (e.g., odds ratio, hazard ratio, mean difference)
+ * - ci_lower: Lower confidence interval bound
+ * - ci_upper: Upper confidence interval bound
+ * - weight (optional): Study weight for point size
+ *
+ * @example
+ * ```typescript
+ * gg(metaData)
+ *   .aes({ y: 'study', x: 'estimate', xmin: 'ci_lower', xmax: 'ci_upper', size: 'weight' })
+ *   .geom(geom_forest({ null_line: 1, log_scale: true }))
+ * ```
+ */
+import type { Geom } from '../types';
+export interface ForestOptions {
+    /** Value for null effect line (default: 1 for ratios, 0 for differences) */
+    null_line?: number;
+    /** Use log scale for x-axis (default: false, set true for ratios) */
+    log_scale?: boolean;
+    /** Show diamond for summary/pooled estimate (default: false) */
+    show_summary?: boolean;
+    /** Row index for summary diamond (default: last row) */
+    summary_row?: number;
+    /** Color for null line (default: '#888888') */
+    null_line_color?: string;
+    /** Line style for null line (default: 'dashed') */
+    null_line_type?: 'solid' | 'dashed' | 'dotted';
+    /** Point character (default: '■') */
+    point_char?: string;
+    /** Show study weights as percentages (default: false) */
+    show_weights?: boolean;
+    /** Minimum point size (default: 1) */
+    min_size?: number;
+    /** Maximum point size (default: 3) */
+    max_size?: number;
+}
+export declare function geom_forest(options?: ForestOptions): Geom;
+//# sourceMappingURL=forest.d.ts.map

package/dist/geoms/forest.d.ts.map

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package/dist/geoms/funnel.d.ts

@@ -0,0 +1,78 @@
+/**
+ * Funnel Plot Geometry
+ *
+ * Creates funnel plots for detecting publication bias in meta-analyses.
+ * Plots effect size against precision (1/SE or sample size).
+ *
+ * @example
+ * // Basic funnel plot
+ * gg(data)
+ *   .aes({ x: 'effect_size', y: 'se' })
+ *   .geom(geom_funnel())
+ *
+ * @example
+ * // Funnel plot with contour lines
+ * gg(data)
+ *   .aes({ x: 'effect_size', y: 'se' })
+ *   .geom(geom_funnel({ show_contours: true }))
+ *
+ * @example
+ * // Funnel plot with significance regions
+ * gg(data)
+ *   .aes({ x: 'effect_size', y: 'se' })
+ *   .geom(geom_funnel({ show_significance: true }))
+ */
+import type { Geom } from '../types';
+export interface FunnelOptions {
+    /**
+     * Show pseudo-confidence interval contours
+     * @default true
+     */
+    show_contours?: boolean;
+    /**
+     * Contour levels (e.g., [0.90, 0.95, 0.99])
+     * @default [0.95]
+     */
+    contour_levels?: number[];
+    /**
+     * Show significance regions
+     * @default false
+     */
+    show_significance?: boolean;
+    /**
+     * Summary effect estimate (vertical line)
+     * If not provided, uses mean of effect sizes
+     * @default undefined
+     */
+    summary_effect?: number;
+    /**
+     * Show vertical line at summary effect
+     * @default true
+     */
+    show_summary_line?: boolean;
+    /**
+     * Y-axis is SE (true) or precision 1/SE (false)
+     * @default true
+     */
+    y_is_se?: boolean;
+    /**
+     * Invert y-axis (SE plots typically have 0 at top)
+     * @default true
+     */
+    invert_y?: boolean;
+    /**
+     * Point character
+     * @default '●'
+     */
+    point_char?: string;
+    /**
+     * Contour color
+     * @default '#888888'
+     */
+    contour_color?: string;
+}
+/**
+ * Create a funnel plot geometry
+ */
+export declare function geom_funnel(options?: FunnelOptions): Geom;
+//# sourceMappingURL=funnel.d.ts.map

package/dist/geoms/funnel.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"funnel.d.ts","sourceRoot":"","sources":["../../src/geoms/funnel.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;GAuBG;AAEH,OAAO,KAAK,EAAE,IAAI,EAAE,MAAM,UAAU,CAAC;AAErC,MAAM,WAAW,aAAa;IAC5B;;;OAGG;IACH,aAAa,CAAC,EAAE,OAAO,CAAC;IAExB;;;OAGG;IACH,cAAc,CAAC,EAAE,MAAM,EAAE,CAAC;IAE1B;;;OAGG;IACH,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAE5B;;;;OAIG;IACH,cAAc,CAAC,EAAE,MAAM,CAAC;IAExB;;;OAGG;IACH,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAE5B;;;OAGG;IACH,OAAO,CAAC,EAAE,OAAO,CAAC;IAElB;;;OAGG;IACH,QAAQ,CAAC,EAAE,OAAO,CAAC;IAEnB;;;OAGG;IACH,UAAU,CAAC,EAAE,MAAM,CAAC;IAEpB;;;OAGG;IACH,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,OAAO,GAAE,aAAkB,GAAG,IAAI,CAiB7D"}

package/dist/geoms/heatmap.d.ts

@@ -0,0 +1,34 @@
+/**
+ * Heatmap Geometry with Optional Clustering
+ *
+ * Visualizes matrix data as a colored grid with optional hierarchical clustering
+ * dendrograms. Commonly used for gene expression matrices, correlation matrices,
+ * and other 2D data.
+ */
+import type { Geom } from '../types';
+export interface HeatmapOptions {
+    x_col?: string;
+    y_col?: string;
+    value_col?: string;
+    low_color?: string;
+    mid_color?: string;
+    high_color?: string;
+    na_color?: string;
+    midpoint?: number;
+    cluster_rows?: boolean;
+    cluster_cols?: boolean;
+    clustering_method?: 'complete' | 'single' | 'average';
+    clustering_distance?: 'euclidean' | 'correlation' | 'manhattan';
+    show_row_dendrogram?: boolean;
+    show_col_dendrogram?: boolean;
+    dendrogram_ratio?: number;
+    show_row_labels?: boolean;
+    show_col_labels?: boolean;
+    show_values?: boolean;
+    value_format?: string;
+    cell_char?: string;
+    border?: boolean;
+    scale?: 'none' | 'row' | 'column';
+}
+export declare function geom_heatmap(options?: HeatmapOptions): Geom;
+//# sourceMappingURL=heatmap.d.ts.map

package/dist/geoms/heatmap.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"heatmap.d.ts","sourceRoot":"","sources":["../../src/geoms/heatmap.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,KAAK,EAAE,IAAI,EAAE,MAAM,UAAU,CAAA;AAEpC,MAAM,WAAW,cAAc;IAE7B,KAAK,CAAC,EAAE,MAAM,CAAA;IACd,KAAK,CAAC,EAAE,MAAM,CAAA;IACd,SAAS,CAAC,EAAE,MAAM,CAAA;IAGlB,SAAS,CAAC,EAAE,MAAM,CAAA;IAClB,SAAS,CAAC,EAAE,MAAM,CAAA;IAClB,UAAU,CAAC,EAAE,MAAM,CAAA;IACnB,QAAQ,CAAC,EAAE,MAAM,CAAA;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAA;IAGjB,YAAY,CAAC,EAAE,OAAO,CAAA;IACtB,YAAY,CAAC,EAAE,OAAO,CAAA;IACtB,iBAAiB,CAAC,EAAE,UAAU,GAAG,QAAQ,GAAG,SAAS,CAAA;IACrD,mBAAmB,CAAC,EAAE,WAAW,GAAG,aAAa,GAAG,WAAW,CAAA;IAG/D,mBAAmB,CAAC,EAAE,OAAO,CAAA;IAC7B,mBAAmB,CAAC,EAAE,OAAO,CAAA;IAC7B,gBAAgB,CAAC,EAAE,MAAM,CAAA;IAGzB,eAAe,CAAC,EAAE,OAAO,CAAA;IACzB,eAAe,CAAC,EAAE,OAAO,CAAA;IACzB,WAAW,CAAC,EAAE,OAAO,CAAA;IACrB,YAAY,CAAC,EAAE,MAAM,CAAA;IAGrB,SAAS,CAAC,EAAE,MAAM,CAAA;IAClB,MAAM,CAAC,EAAE,OAAO,CAAA;IAGhB,KAAK,CAAC,EAAE,MAAM,GAAG,KAAK,GAAG,QAAQ,CAAA;CAClC;AAED,wBAAgB,YAAY,CAAC,OAAO,GAAE,cAAmB,GAAG,IAAI,CA8B/D"}

package/dist/geoms/index.d.ts

@@ -20,7 +20,7 @@ export { geom_bin2d, type Bin2dOptions } from './bin2d';
 export { geom_contour, geom_contour_filled, geom_density_2d, type ContourOptions } from './contour';
 export { geom_errorbar, geom_errorbarh, geom_crossbar, geom_linerange, geom_pointrange, type ErrorbarOptions, } from './errorbar';
 export { geom_rect, geom_abline, type RectOptions, type AblineOptions } from './rect';
-export { geom_qq, geom_qq_line, type QQOptions, type QQLineOptions } from './qq';
+export { geom_qq, type QQOptions } from './qq';
 export { geom_ridgeline, geom_joy, type RidgelineOptions } from './ridgeline';
 export { geom_beeswarm, geom_quasirandom, type BeeswarmOptions } from './beeswarm';
 export { geom_dumbbell, type DumbbellOptions } from './dumbbell';
@@ -35,4 +35,18 @@ export { geom_corrmat, type CorrmatOptions } from './corrmat';
 export { geom_sankey, type SankeyOptions } from './sankey';
 export { geom_treemap, type TreemapOptions } from './treemap';
 export { geom_volcano, type VolcanoOptions } from './volcano';
+export { geom_ma, type MAOptions } from './ma';
+export { geom_manhattan, type ManhattanOptions } from './manhattan';
+export { geom_heatmap, type HeatmapOptions } from './heatmap';
+export { geom_biplot, type BiplotOptions } from './biplot';
+export { geom_kaplan_meier, type KaplanMeierOptions } from './kaplan-meier';
+export { geom_forest, type ForestOptions } from './forest';
+export { geom_roc, type RocOptions } from './roc';
+export { geom_bland_altman, type BlandAltmanOptions } from './bland-altman';
+export { geom_ecdf, type ECDFOptions } from './ecdf';
+export { geom_funnel, type FunnelOptions } from './funnel';
+export { geom_control, type ControlOptions } from './control';
+export { geom_scree, type ScreeOptions } from './scree';
+export { geom_upset, type UpsetOptions } from './upset';
+export { geom_dendrogram, type DendrogramOptions } from './dendrogram';
 //# sourceMappingURL=index.d.ts.map

package/dist/geoms/index.d.ts.map

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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/geoms/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,UAAU,EAAE,KAAK,YAAY,EAAE,MAAM,SAAS,CAAA;AACvD,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,UAAU,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AAC5E,OAAO,EAAE,SAAS,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AACpD,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,KAAK,UAAU,EAAE,MAAM,OAAO,CAAA;AAC3D,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AAChE,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AACjE,OAAO,EAAE,cAAc,EAAE,aAAa,EAAE,KAAK,gBAAgB,EAAE,KAAK,eAAe,EAAE,MAAM,aAAa,CAAA;AACxG,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,YAAY,EAAE,UAAU,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AACzE,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,SAAS,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AACpD,OAAO,EAAE,QAAQ,EAAE,KAAK,UAAU,EAAE,MAAM,OAAO,CAAA;AAGjD,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AACjE,OAAO,EAAE,UAAU,EAAE,KAAK,YAAY,EAAE,MAAM,SAAS,CAAA;AACvD,OAAO,EAAE,YAAY,EAAE,mBAAmB,EAAE,eAAe,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AACnG,OAAO,EACL,aAAa,EACb,cAAc,EACd,aAAa,EACb,cAAc,EACd,eAAe,EACf,KAAK,eAAe,GACrB,MAAM,YAAY,CAAA;AACnB,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,KAAK,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,QAAQ,CAAA;AACrF,OAAO,EAAE,OAAO,EAAE,KAAK,SAAS,EAAE,MAAM,MAAM,CAAA;AAC9C,OAAO,EAAE,cAAc,EAAE,QAAQ,EAAE,KAAK,gBAAgB,EAAE,MAAM,aAAa,CAAA;AAC7E,OAAO,EAAE,aAAa,EAAE,gBAAgB,EAAE,KAAK,eAAe,EAAE,MAAM,YAAY,CAAA;AAClF,OAAO,EAAE,aAAa,EAAE,KAAK,eAAe,EAAE,MAAM,YAAY,CAAA;AAChE,OAAO,EAAE,aAAa,EAAE,KAAK,eAAe,EAAE,MAAM,YAAY,CAAA;AAChE,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,cAAc,EAAE,KAAK,gBAAgB,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,aAAa,CAAA;AAC3F,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,YAAY,EAAE,YAAY,EAAE,MAAM,WAAW,CAAA;AAGzF,OAAO,EAAE,aAAa,EAAE,KAAK,eAAe,EAAE,MAAM,YAAY,CAAA;AAChE,OAAO,EAAE,UAAU,EAAE,WAAW,EAAE,KAAK,YAAY,EAAE,MAAM,SAAS,CAAA;AACpE,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,OAAO,EAAE,KAAK,SAAS,EAAE,MAAM,MAAM,CAAA;AAC9C,OAAO,EAAE,cAAc,EAAE,KAAK,gBAAgB,EAAE,MAAM,aAAa,CAAA;AACnE,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAG1D,OAAO,EAAE,iBAAiB,EAAE,KAAK,kBAAkB,EAAE,MAAM,gBAAgB,CAAA;AAC3E,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,QAAQ,EAAE,KAAK,UAAU,EAAE,MAAM,OAAO,CAAA;AACjD,OAAO,EAAE,iBAAiB,EAAE,KAAK,kBAAkB,EAAE,MAAM,gBAAgB,CAAA;AAG3E,OAAO,EAAE,SAAS,EAAE,KAAK,WAAW,EAAE,MAAM,QAAQ,CAAA;AACpD,OAAO,EAAE,WAAW,EAAE,KAAK,aAAa,EAAE,MAAM,UAAU,CAAA;AAC1D,OAAO,EAAE,YAAY,EAAE,KAAK,cAAc,EAAE,MAAM,WAAW,CAAA;AAC7D,OAAO,EAAE,UAAU,EAAE,KAAK,YAAY,EAAE,MAAM,SAAS,CAAA;AAGvD,OAAO,EAAE,UAAU,EAAE,KAAK,YAAY,EAAE,MAAM,SAAS,CAAA;AACvD,OAAO,EAAE,eAAe,EAAE,KAAK,iBAAiB,EAAE,MAAM,cAAc,CAAA"}

package/dist/geoms/kaplan-meier.d.ts

@@ -0,0 +1,39 @@
+/**
+ * Kaplan-Meier Survival Curve Geom
+ *
+ * Creates survival curves for time-to-event analysis.
+ * Commonly used in clinical trials and epidemiological studies.
+ *
+ * Expected data format:
+ * - time: Time to event or censoring
+ * - status: Event indicator (1 = event, 0 = censored)
+ * - group (optional): Stratification variable for multiple curves
+ *
+ * @example
+ * ```typescript
+ * gg(survivalData)
+ *   .aes({ x: 'time', y: 'status', color: 'treatment' })
+ *   .geom(geom_kaplan_meier({ show_ci: true, show_censored: true }))
+ * ```
+ */
+import type { Geom } from '../types';
+export interface KaplanMeierOptions {
+    /** Show confidence intervals (default: false) */
+    show_ci?: boolean;
+    /** Confidence level for CI (default: 0.95) */
+    conf_level?: number;
+    /** Show censored observations as tick marks (default: true) */
+    show_censored?: boolean;
+    /** Character for censored marks (default: '+') */
+    censor_char?: string;
+    /** Show number at risk table (default: false) */
+    show_risk_table?: boolean;
+    /** Line style for survival curve (default: 'solid') */
+    linetype?: 'solid' | 'dashed' | 'dotted';
+    /** Show median survival line (default: false) */
+    show_median?: boolean;
+    /** Step style: 'post' keeps value until next event (default: 'post') */
+    step_type?: 'post' | 'pre';
+}
+export declare function geom_kaplan_meier(options?: KaplanMeierOptions): Geom;
+//# sourceMappingURL=kaplan-meier.d.ts.map

package/dist/geoms/kaplan-meier.d.ts.map

@@ -0,0 +1 @@
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