@geotechcli/core 0.4.27 → 0.4.28

package/dist/tabular/xlsx.js

@@ -0,0 +1,190 @@
+import { readFile } from 'node:fs/promises';
+import { strFromU8, unzipSync } from 'fflate';
+const DEFAULT_MAX_ROWS = 200;
+function decodeXml(value) {
+    return value
+        .replace(/&lt;/g, '<')
+        .replace(/&gt;/g, '>')
+        .replace(/&quot;/g, '"')
+        .replace(/&apos;/g, "'")
+        .replace(/&amp;/g, '&');
+}
+function stripTags(value) {
+    return decodeXml(value.replace(/<[^>]+>/g, ''));
+}
+function getZipText(entries, name) {
+    const normalized = name.replace(/^\/+/, '');
+    const entry = entries[normalized];
+    return entry ? strFromU8(entry) : undefined;
+}
+function parseAttributes(tag) {
+    const attrs = {};
+    const pattern = /([A-Za-z_:][A-Za-z0-9_:.-]*)="([^"]*)"/g;
+    let match;
+    while ((match = pattern.exec(tag)) !== null) {
+        attrs[match[1]] = decodeXml(match[2]);
+    }
+    return attrs;
+}
+function parseSharedStrings(xml) {
+    if (!xml)
+        return [];
+    const strings = [];
+    const siPattern = /<si\b[^>]*>([\s\S]*?)<\/si>/g;
+    let match;
+    while ((match = siPattern.exec(xml)) !== null) {
+        const segment = match[1];
+        const texts = [...segment.matchAll(/<t\b[^>]*>([\s\S]*?)<\/t>/g)].map((textMatch) => decodeXml(textMatch[1]));
+        strings.push(texts.length > 0 ? texts.join('') : stripTags(segment));
+    }
+    return strings;
+}
+function parseWorkbookSheets(workbookXml) {
+    if (!workbookXml)
+        return [];
+    const sheets = [];
+    const sheetPattern = /<sheet\b([^>]+?)\/?>/g;
+    let match;
+    while ((match = sheetPattern.exec(workbookXml)) !== null) {
+        const attrs = parseAttributes(match[1]);
+        const relId = attrs['r:id'];
+        if (attrs.name && relId) {
+            sheets.push({ name: attrs.name, relId });
+        }
+    }
+    return sheets;
+}
+function parseWorkbookRelationships(relsXml) {
+    const rels = new Map();
+    if (!relsXml)
+        return rels;
+    const relPattern = /<Relationship\b([^>]+?)\/?>/g;
+    let match;
+    while ((match = relPattern.exec(relsXml)) !== null) {
+        const attrs = parseAttributes(match[1]);
+        if (attrs.Id && attrs.Target) {
+            const target = attrs.Target.startsWith('/xl/') ? attrs.Target.slice(1) : `xl/${attrs.Target.replace(/^\/+/, '')}`;
+            rels.set(attrs.Id, target.replace(/\\/g, '/'));
+        }
+    }
+    return rels;
+}
+function columnIndexFromRef(cellRef) {
+    const letters = (cellRef.match(/^[A-Z]+/i)?.[0] ?? '').toUpperCase();
+    let index = 0;
+    for (const letter of letters) {
+        index = index * 26 + (letter.charCodeAt(0) - 64);
+    }
+    return Math.max(0, index - 1);
+}
+function coerceCell(value) {
+    const trimmed = value.trim();
+    if (!trimmed)
+        return null;
+    if (/^(true|false)$/i.test(trimmed))
+        return /^true$/i.test(trimmed);
+    const parsed = Number(trimmed.replace(/,/g, ''));
+    if (Number.isFinite(parsed) && /^[+-]?(?:\d+\.?\d*|\.\d+)(?:e[+-]?\d+)?$/i.test(trimmed.replace(/,/g, ''))) {
+        return parsed;
+    }
+    return trimmed;
+}
+function getCellValue(cellXml, sharedStrings) {
+    const openTag = cellXml.match(/^<c\b([^>]*)>/)?.[1] ?? '';
+    const attrs = parseAttributes(openTag);
+    const rawValue = cellXml.match(/<v\b[^>]*>([\s\S]*?)<\/v>/)?.[1];
+    if (attrs.t === 's' && rawValue != null) {
+        return sharedStrings[Number(rawValue)] ?? null;
+    }
+    if (attrs.t === 'inlineStr') {
+        const inlineText = [...cellXml.matchAll(/<t\b[^>]*>([\s\S]*?)<\/t>/g)]
+            .map((match) => decodeXml(match[1]))
+            .join('');
+        return inlineText.trim() ? inlineText : null;
+    }
+    if (attrs.t === 'str' && rawValue != null) {
+        return decodeXml(rawValue);
+    }
+    if (attrs.t === 'b' && rawValue != null) {
+        return rawValue.trim() === '1';
+    }
+    return rawValue == null ? null : coerceCell(decodeXml(rawValue));
+}
+function uniquifyHeaders(headers) {
+    const counts = new Map();
+    return headers.map((header, index) => {
+        const base = header.trim() || `Column ${index + 1}`;
+        const count = counts.get(base) ?? 0;
+        counts.set(base, count + 1);
+        return count === 0 ? base : `${base} ${count + 1}`;
+    });
+}
+function parseWorksheet(name, xml, sharedStrings, maxRows) {
+    const warnings = [];
+    const matrix = [];
+    const rowPattern = /<row\b[^>]*>([\s\S]*?)<\/row>/g;
+    let rowMatch;
+    while ((rowMatch = rowPattern.exec(xml)) !== null) {
+        if (matrix.length > maxRows + 1) {
+            warnings.push(`Sampled first ${maxRows} data rows from sheet "${name}".`);
+            break;
+        }
+        const rowCells = [];
+        const cellPattern = /<c\b[^>]*>[\s\S]*?<\/c>/g;
+        let cellMatch;
+        while ((cellMatch = cellPattern.exec(rowMatch[1])) !== null) {
+            const ref = cellMatch[0].match(/^<c\b[^>]*\br="([^"]+)"/)?.[1];
+            const columnIndex = ref ? columnIndexFromRef(ref) : rowCells.length;
+            rowCells[columnIndex] = getCellValue(cellMatch[0], sharedStrings);
+        }
+        if (rowCells.some((cell) => cell != null && String(cell).trim().length > 0)) {
+            matrix.push(rowCells);
+        }
+    }
+    if (matrix.length === 0) {
+        return { name, rows: [], totalRowsSampled: 0, warnings: [...warnings, `Sheet "${name}" has no readable rows.`] };
+    }
+    const headers = uniquifyHeaders(matrix[0].map((cell, index) => String(cell ?? `Column ${index + 1}`).trim()));
+    const rows = matrix.slice(1, maxRows + 1).map((cells) => {
+        const row = {};
+        headers.forEach((header, index) => {
+            row[header] = cells[index] ?? null;
+        });
+        return row;
+    }).filter((row) => Object.values(row).some((cell) => cell != null && String(cell).trim().length > 0));
+    return { name, rows, totalRowsSampled: rows.length, warnings };
+}
+export async function parseXlsxFile(filePath, options = {}) {
+    const warnings = [];
+    const bytes = await readFile(filePath);
+    const entries = unzipSync(new Uint8Array(bytes));
+    const workbookXml = getZipText(entries, 'xl/workbook.xml');
+    const relsXml = getZipText(entries, 'xl/_rels/workbook.xml.rels');
+    const sharedStrings = parseSharedStrings(getZipText(entries, 'xl/sharedStrings.xml'));
+    const sheetRefs = parseWorkbookSheets(workbookXml);
+    const rels = parseWorkbookRelationships(relsXml);
+    const maxRows = Math.max(1, options.maxRows ?? DEFAULT_MAX_ROWS);
+    if (sheetRefs.length === 0) {
+        warnings.push('Workbook sheet metadata was not found.');
+    }
+    const sheetPaths = sheetRefs.length > 0
+        ? sheetRefs.map((sheet, index) => ({
+            name: sheet.name,
+            path: rels.get(sheet.relId) ?? `xl/worksheets/sheet${index + 1}.xml`,
+        }))
+        : Object.keys(entries)
+            .filter((entry) => /^xl\/worksheets\/sheet\d+\.xml$/i.test(entry))
+            .sort()
+            .map((path, index) => ({ name: `Sheet ${index + 1}`, path }));
+    const sheets = [];
+    for (const sheet of sheetPaths) {
+        const xml = getZipText(entries, sheet.path);
+        if (!xml) {
+            warnings.push(`Worksheet XML missing for "${sheet.name}".`);
+            continue;
+        }
+        sheets.push(parseWorksheet(sheet.name, xml, sharedStrings, maxRows));
+    }
+    return { sheets, warnings };
+}
+//# sourceMappingURL=xlsx.js.map

package/dist/tabular/xlsx.js.map

@@ -0,0 +1 @@
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package/dist/workspace/classifier.d.ts

@@ -0,0 +1,7 @@
+import type { WorkspaceFileClassification } from './manifest.js';
+import type { TabularSchemaInference } from '../tabular/index.js';
+export declare function classifyWorkspaceFile(fileName: string, options?: {
+    schemas?: TabularSchemaInference[];
+    agsSignature?: boolean;
+}): WorkspaceFileClassification;
+//# sourceMappingURL=classifier.d.ts.map

package/dist/workspace/classifier.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"classifier.d.ts","sourceRoot":"","sources":["../../src/workspace/classifier.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAEV,2BAA2B,EAE5B,MAAM,eAAe,CAAC;AACvB,OAAO,KAAK,EAAE,sBAAsB,EAAE,MAAM,qBAAqB,CAAC;AAoGlE,wBAAgB,qBAAqB,CACnC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE;IACP,OAAO,CAAC,EAAE,sBAAsB,EAAE,CAAC;IACnC,YAAY,CAAC,EAAE,OAAO,CAAC;CACnB,GACL,2BAA2B,CA8F7B"}

package/dist/workspace/classifier.js

@@ -0,0 +1,186 @@
+import { extname } from 'node:path';
+const IMAGE_EXTENSIONS = new Set(['.jpg', '.jpeg', '.png', '.tif', '.tiff', '.webp', '.bmp']);
+const GIS_EXTENSIONS = new Set(['.geojson', '.jsonl', '.shp', '.kml', '.kmz', '.gpkg']);
+const CAD_EXTENSIONS = new Set(['.dxf', '.dwg']);
+const OFFICE_EXTENSIONS = new Set(['.docx', '.doc', '.pptx']);
+const TEXT_EXTENSIONS = new Set(['.txt', '.md', '.dat', '.tsv']);
+function addBranch(branches, branch) {
+    branches.add(branch);
+}
+function filenameSignals(fileName) {
+    const lower = fileName.toLowerCase();
+    const branches = [];
+    const signals = [];
+    const hit = (pattern, signal) => {
+        if (!pattern.test(lower))
+            return false;
+        signals.push(signal);
+        return true;
+    };
+    if (hit(/\b(cpt|cone[-_\s]?penetration)\b/, 'filename:CPT')) {
+        branches.push('site-investigation', 'foundation');
+        return { datasetType: 'cpt-profile', branches, signals };
+    }
+    if (hit(/\b(spt|standard[-_\s]?penetration|n[-_\s]?value)\b/, 'filename:SPT')) {
+        branches.push('site-investigation', 'foundation', 'liquefaction');
+        return { datasetType: 'spt-profile', branches, signals };
+    }
+    if (hit(/\b(borehole|boring|bh[-_\s]?\d+|drill[-_\s]?log)\b/, 'filename:borehole')) {
+        branches.push('site-investigation', 'foundation');
+        return { datasetType: 'borehole-log', branches, signals };
+    }
+    if (hit(/\b(geotechnical|geotech[-_\s]?document|soil[-_\s]?investigation|ground[-_\s]?investigation|site[-_\s]?investigation)\b/, 'filename:geotechnical-report')) {
+        branches.push('site-investigation', 'foundation');
+        return { datasetType: 'geotechnical-report', branches, signals };
+    }
+    if (hit(/\b(atterberg|gradation|sieve|triaxial|consolidation|moisture|density|lab)\b/, 'filename:lab-test')) {
+        branches.push('foundation', 'classification');
+        return { datasetType: 'lab-test-summary', branches, signals };
+    }
+    if (hit(/\b(settlement|piezometer|inclinometer|monitoring|instrumentation)\b/, 'filename:monitoring')) {
+        branches.push('monitoring');
+        return { datasetType: 'monitoring-time-series', branches, signals };
+    }
+    if (hit(/\b(vibration|accelerometer|seismic[-_\s]?signal|fft|psd)\b/, 'filename:signal')) {
+        branches.push('monitoring', 'signal-processing');
+        return { datasetType: 'signal-record', branches, signals };
+    }
+    if (hit(/\b(load[-_\s]?test|pile[-_\s]?load)\b/, 'filename:pile-load-test')) {
+        branches.push('foundation', 'pile');
+        return { datasetType: 'pile-load-test', branches, signals };
+    }
+    if (hit(/\b(coordinate|location|easting|northing|survey)\b/, 'filename:coordinates')) {
+        branches.push('mapping', 'site-investigation');
+        return { datasetType: 'coordinate-table', branches, signals };
+    }
+    return { branches, signals };
+}
+function kindFromExtension(extension) {
+    if (extension === '.pdf')
+        return 'pdf';
+    if (extension === '.csv' || extension === '.tsv')
+        return 'csv';
+    if (extension === '.xlsx')
+        return 'xlsx';
+    if (extension === '.ags')
+        return 'ags';
+    if (extension === '.json')
+        return 'json';
+    if (IMAGE_EXTENSIONS.has(extension))
+        return 'image';
+    if (GIS_EXTENSIONS.has(extension))
+        return 'gis';
+    if (CAD_EXTENSIONS.has(extension))
+        return 'cad';
+    if (OFFICE_EXTENSIONS.has(extension))
+        return 'office';
+    if (TEXT_EXTENSIONS.has(extension))
+        return 'text';
+    return 'unknown';
+}
+function datasetTypeFromSchema(schema) {
+    switch (schema.datasetType) {
+        case 'borehole-table':
+            return 'borehole-table';
+        case 'cpt-profile':
+            return 'cpt-profile';
+        case 'spt-profile':
+            return 'spt-profile';
+        case 'lab-test-summary':
+            return 'lab-test-summary';
+        case 'coordinate-table':
+            return 'coordinate-table';
+        case 'monitoring-time-series':
+            return 'monitoring-time-series';
+        case 'pile-load-test':
+            return 'pile-load-test';
+        case 'signal-record':
+            return 'signal-record';
+        default:
+            return 'unknown';
+    }
+}
+export function classifyWorkspaceFile(fileName, options = {}) {
+    const extension = extname(fileName).toLowerCase();
+    const kind = kindFromExtension(extension);
+    const branches = new Set();
+    const warnings = [];
+    const signals = [];
+    let datasetType = 'unknown';
+    let confidence = 0.35;
+    const nameSignal = filenameSignals(fileName);
+    nameSignal.branches.forEach((branch) => addBranch(branches, branch));
+    signals.push(...nameSignal.signals);
+    if (nameSignal.datasetType) {
+        datasetType = nameSignal.datasetType;
+        confidence = 0.64;
+    }
+    if (kind === 'ags') {
+        datasetType = 'ags-ground-investigation';
+        addBranch(branches, 'site-investigation');
+        addBranch(branches, 'foundation');
+        signals.push(options.agsSignature ? 'ags:GROUP/HEADING signature' : 'extension:.ags');
+        confidence = options.agsSignature ? 0.92 : 0.76;
+    }
+    if (kind === 'gis') {
+        datasetType = 'map-or-gis';
+        addBranch(branches, 'mapping');
+        signals.push('extension:GIS');
+        confidence = Math.max(confidence, 0.74);
+    }
+    if (kind === 'cad') {
+        addBranch(branches, 'mapping');
+        signals.push('extension:CAD');
+        confidence = Math.max(confidence, 0.55);
+    }
+    if (kind === 'image') {
+        datasetType = datasetType === 'unknown' ? 'image-evidence' : datasetType;
+        signals.push('extension:image');
+        confidence = Math.max(confidence, 0.48);
+    }
+    if (kind === 'json' && datasetType === 'unknown') {
+        datasetType = 'calculation-result';
+        signals.push('extension:json');
+        confidence = 0.45;
+    }
+    const schemas = options.schemas ?? [];
+    const strongestSchema = schemas
+        .filter((schema) => schema.datasetType !== 'generic-table')
+        .sort((left, right) => right.confidence - left.confidence)[0];
+    if (strongestSchema) {
+        const schemaDatasetType = datasetTypeFromSchema(strongestSchema);
+        if (schemaDatasetType !== 'unknown') {
+            datasetType = schemaDatasetType;
+            confidence = Math.max(confidence, strongestSchema.confidence);
+            strongestSchema.branches.forEach((branch) => addBranch(branches, branch));
+            signals.push(`schema:${strongestSchema.datasetType}`);
+        }
+    }
+    if (!strongestSchema && schemas.length > 0) {
+        const schemaWithBranches = schemas.find((schema) => schema.branches.length > 0);
+        if (schemaWithBranches) {
+            schemaWithBranches.branches.forEach((branch) => addBranch(branches, branch));
+            confidence = Math.max(confidence, schemaWithBranches.confidence);
+            signals.push(`schema:${schemaWithBranches.datasetType}`);
+        }
+    }
+    if ((kind === 'csv' || kind === 'xlsx') && schemas.length === 0) {
+        signals.push(`extension:${extension.slice(1)}`);
+        warnings.push('Tabular schema was not sampled.');
+    }
+    if (kind === 'pdf' && datasetType === 'unknown') {
+        datasetType = 'geotechnical-report';
+        addBranch(branches, 'site-investigation');
+        signals.push('extension:pdf');
+        confidence = 0.42;
+    }
+    return {
+        kind,
+        datasetType,
+        branches: [...branches],
+        confidence: Math.round(confidence * 100) / 100,
+        signals: signals.length > 0 ? [...new Set(signals)] : ['extension-only'],
+        warnings,
+    };
+}
+//# sourceMappingURL=classifier.js.map

package/dist/workspace/classifier.js.map

@@ -0,0 +1 @@
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package/dist/workspace/dossier.d.ts

@@ -0,0 +1,3 @@
+import type { ProjectManifest } from './manifest.js';
+export declare function renderWorkspaceManifestAsHtml(manifest: ProjectManifest): string;
+//# sourceMappingURL=dossier.d.ts.map

package/dist/workspace/dossier.d.ts.map

@@ -0,0 +1 @@
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