@geotechcli/core 0.4.26 → 0.4.28

package/dist/tabular/schema-inference.js

@@ -0,0 +1,272 @@
+function normalizeHeader(value) {
+    return value.toLowerCase().replace(/[^a-z0-9]+/g, '');
+}
+function humanCell(value) {
+    if (value == null)
+        return '';
+    if (typeof value === 'number')
+        return String(value);
+    if (typeof value === 'boolean')
+        return value ? 'true' : 'false';
+    return value;
+}
+function isFiniteNumber(value) {
+    return typeof value === 'number' && Number.isFinite(value);
+}
+function inferColumnType(values) {
+    const present = values.filter((value) => value !== null && String(value).trim().length > 0);
+    if (present.length === 0)
+        return 'empty';
+    const numeric = present.filter(isFiniteNumber).length;
+    const boolean = present.filter((value) => typeof value === 'boolean').length;
+    const dates = present.filter((value) => typeof value === 'string' && !Number.isNaN(Date.parse(value))).length;
+    if (numeric === present.length)
+        return 'number';
+    if (boolean === present.length)
+        return 'boolean';
+    if (dates >= Math.max(2, Math.ceil(present.length * 0.8)))
+        return 'date';
+    if (numeric > 0 || boolean > 0)
+        return 'mixed';
+    return 'text';
+}
+function inferUnit(header) {
+    const explicit = header.match(/\(([^)]+)\)|\[([^\]]+)\]/);
+    if (explicit) {
+        return (explicit[1] ?? explicit[2]).trim();
+    }
+    const normalized = header
+        .toLowerCase()
+        .replace(/([a-z])([A-Z])/g, '$1_$2')
+        .replace(/[^a-z0-9]+/g, '_');
+    const units = [
+        'kn_m3',
+        'g_cm3',
+        'kpa',
+        'mpa',
+        'gpa',
+        'kn',
+        'mn',
+        'mm',
+        'cm',
+        'm',
+        'deg',
+        'degree',
+        'percent',
+        'pct',
+        'hz',
+        's',
+        'sec',
+        'min',
+        'hr',
+        'day',
+        'year',
+    ];
+    return units.find((unit) => new RegExp(`(?:^|_)${unit}(?:_|$)`).test(normalized));
+}
+function normalizeAlias(value) {
+    return value.toLowerCase().replace(/[^a-z0-9]+/g, '');
+}
+function hasAny(normalized, aliases) {
+    return aliases.some((rawAlias) => {
+        const alias = normalizeAlias(rawAlias);
+        if (alias.length <= 3) {
+            return normalized === alias || normalized.startsWith(alias);
+        }
+        return normalized.includes(alias);
+    });
+}
+function inferRoles(header, type) {
+    const normalized = normalizeHeader(header);
+    const roles = new Set();
+    if (hasAny(normalized, ['depth', 'belowground', 'bgl', 'elevationdepth', 'z']))
+        roles.add('depth');
+    if (hasAny(normalized, ['time', 'elapsed', 'duration']))
+        roles.add('time');
+    if (hasAny(normalized, ['date', 'timestamp', 'datetime']))
+        roles.add('date');
+    if (hasAny(normalized, ['easting', 'eastcoord', 'xcoord', 'gridx']))
+        roles.add('easting');
+    if (hasAny(normalized, ['northing', 'northcoord', 'ycoord', 'gridy']))
+        roles.add('northing');
+    if (hasAny(normalized, ['latitude', 'lat']))
+        roles.add('latitude');
+    if (hasAny(normalized, ['longitude', 'lon', 'lng']))
+        roles.add('longitude');
+    if (hasAny(normalized, ['borehole', 'holeid', 'bhid', 'bhno', 'locationid']))
+        roles.add('borehole_id');
+    if (hasAny(normalized, ['sampleid', 'sampleno', 'sample', 'specimen']))
+        roles.add('sample_id');
+    if (hasAny(normalized, ['testid', 'testno']))
+        roles.add('test_id');
+    if (hasAny(normalized, ['sptn', 'nvalue', 'blowcount', 'blows', 'n60']))
+        roles.add('spt_n');
+    if (hasAny(normalized, ['qc', 'coneresistance', 'tipresistance']))
+        roles.add('cpt_qc');
+    if (hasAny(normalized, ['fs', 'sleevefriction', 'frictionsleeve']))
+        roles.add('cpt_fs');
+    if (hasAny(normalized, ['watercontent', 'moisturecontent', 'naturalmoisture', 'wpercent']))
+        roles.add('water_content');
+    if (hasAny(normalized, ['liquidlimit', 'll']))
+        roles.add('liquid_limit');
+    if (hasAny(normalized, ['plasticlimit', 'pl']))
+        roles.add('plastic_limit');
+    if (hasAny(normalized, ['plasticityindex', 'pi']))
+        roles.add('plasticity_index');
+    if (hasAny(normalized, ['particlesize', 'grainsize', 'sievemm', 'openingmm']))
+        roles.add('gradation_size');
+    if (hasAny(normalized, ['percentpassing', 'passingpercent', 'percentfiner', 'finerpercent']))
+        roles.add('percent_passing');
+    if (hasAny(normalized, ['unitweight', 'bulkunitweight', 'dryunitweight', 'drydensity', 'gammad']))
+        roles.add('unit_weight');
+    if (hasAny(normalized, ['settlement', 'heave', 'displacement']))
+        roles.add('settlement');
+    if (hasAny(normalized, ['porepressure', 'piezometer', 'waterpressure']))
+        roles.add('pore_pressure');
+    if (hasAny(normalized, ['inclinometer', 'inclination', 'tilt']))
+        roles.add('inclination');
+    if (hasAny(normalized, ['vibration', 'acceleration', 'velocity', 'frequency', 'fft', 'psd']))
+        roles.add('vibration');
+    if (roles.size === 0 && type === 'date')
+        roles.add('date');
+    return roles.size > 0 ? [...roles] : ['unknown'];
+}
+function namesByRole(columns, role) {
+    return columns.filter((column) => column.roles.includes(role)).map((column) => column.name);
+}
+function inferDatasetType(columns) {
+    const has = (role) => columns.some((column) => column.roles.includes(role));
+    const hasAnyRole = (roles) => roles.some(has);
+    if (has('cpt_qc') && has('depth'))
+        return 'cpt-profile';
+    if (has('spt_n') && has('depth'))
+        return 'spt-profile';
+    if (hasAnyRole(['liquid_limit', 'plastic_limit', 'plasticity_index', 'gradation_size', 'percent_passing', 'water_content', 'unit_weight']))
+        return 'lab-test-summary';
+    if ((has('easting') && has('northing')) || (has('latitude') && has('longitude')))
+        return 'coordinate-table';
+    if (hasAnyRole(['settlement', 'pore_pressure', 'inclination']) && hasAnyRole(['time', 'date']))
+        return 'monitoring-time-series';
+    if (has('vibration'))
+        return 'signal-record';
+    if (has('borehole_id') && has('depth'))
+        return 'borehole-table';
+    return 'generic-table';
+}
+function inferBranches(datasetType, columns) {
+    const branches = new Set();
+    const has = (role) => columns.some((column) => column.roles.includes(role));
+    switch (datasetType) {
+        case 'cpt-profile':
+        case 'spt-profile':
+        case 'borehole-table':
+        case 'lab-test-summary':
+            branches.add('site-investigation');
+            branches.add('foundation');
+            break;
+        case 'coordinate-table':
+            branches.add('site-investigation');
+            branches.add('mapping');
+            break;
+        case 'monitoring-time-series':
+            branches.add('monitoring');
+            branches.add('settlement');
+            break;
+        case 'signal-record':
+            branches.add('monitoring');
+            branches.add('signal-processing');
+            break;
+        default:
+            break;
+    }
+    if (has('spt_n'))
+        branches.add('liquefaction');
+    if (has('settlement'))
+        branches.add('settlement');
+    if (has('pore_pressure'))
+        branches.add('seepage');
+    return [...branches];
+}
+function inferConfidence(datasetType, columns, sampledRowCount) {
+    if (sampledRowCount === 0 || columns.length === 0)
+        return 0.2;
+    let score = datasetType === 'generic-table' ? 0.45 : 0.68;
+    const recognizedColumns = columns.filter((column) => !column.roles.includes('unknown')).length;
+    score += Math.min(0.22, recognizedColumns / Math.max(1, columns.length) * 0.22);
+    if (sampledRowCount >= 5)
+        score += 0.08;
+    if (sampledRowCount >= 20)
+        score += 0.04;
+    return Math.round(Math.min(score, 0.96) * 100) / 100;
+}
+export function inferTabularSchema(options) {
+    const headers = options.rows.length > 0 ? Object.keys(options.rows[0]) : [];
+    const columns = headers.map((header) => {
+        const values = options.rows.map((row) => row[header]);
+        const type = inferColumnType(values);
+        const examples = values
+            .map(humanCell)
+            .filter((value) => value.length > 0)
+            .slice(0, 3);
+        const nonEmptyCount = values.filter((value) => value !== null && String(value).trim().length > 0).length;
+        const numericCount = values.filter(isFiniteNumber).length;
+        return {
+            name: header,
+            normalizedName: normalizeHeader(header),
+            type,
+            unit: inferUnit(header),
+            roles: inferRoles(header, type),
+            nonEmptyCount,
+            numericCount,
+            examples,
+        };
+    });
+    const datasetType = inferDatasetType(columns);
+    const branches = inferBranches(datasetType, columns);
+    const warnings = [...(options.warnings ?? [])];
+    if (datasetType === 'generic-table') {
+        warnings.push('No geotechnical schema pattern was detected from sampled headers.');
+    }
+    return {
+        sourceName: options.sourceName,
+        sheetName: options.sheetName,
+        rowCount: options.rowCount ?? options.rows.length,
+        sampledRowCount: options.rows.length,
+        columnCount: columns.length,
+        columns,
+        datasetType,
+        branches,
+        detected: {
+            depthColumns: namesByRole(columns, 'depth'),
+            timeColumns: [...new Set([...namesByRole(columns, 'time'), ...namesByRole(columns, 'date')])],
+            coordinateColumns: [...new Set([
+                    ...namesByRole(columns, 'easting'),
+                    ...namesByRole(columns, 'northing'),
+                    ...namesByRole(columns, 'latitude'),
+                    ...namesByRole(columns, 'longitude'),
+                ])],
+            boreholeIdColumns: namesByRole(columns, 'borehole_id'),
+            sampleIdColumns: namesByRole(columns, 'sample_id'),
+            sptColumns: namesByRole(columns, 'spt_n'),
+            cptColumns: [...new Set([...namesByRole(columns, 'cpt_qc'), ...namesByRole(columns, 'cpt_fs')])],
+            labColumns: [...new Set([
+                    ...namesByRole(columns, 'water_content'),
+                    ...namesByRole(columns, 'liquid_limit'),
+                    ...namesByRole(columns, 'plastic_limit'),
+                    ...namesByRole(columns, 'plasticity_index'),
+                    ...namesByRole(columns, 'gradation_size'),
+                    ...namesByRole(columns, 'percent_passing'),
+                    ...namesByRole(columns, 'unit_weight'),
+                ])],
+            monitoringColumns: [...new Set([
+                    ...namesByRole(columns, 'settlement'),
+                    ...namesByRole(columns, 'pore_pressure'),
+                    ...namesByRole(columns, 'inclination'),
+                    ...namesByRole(columns, 'vibration'),
+                ])],
+        },
+        confidence: inferConfidence(datasetType, columns, options.rows.length),
+        warnings,
+    };
+}
+//# sourceMappingURL=schema-inference.js.map

package/dist/tabular/schema-inference.js.map

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package/dist/tabular/xlsx.d.ts

@@ -0,0 +1,15 @@
+import type { TabularRow } from './csv.js';
+export interface ParsedWorkbookSheet {
+    name: string;
+    rows: TabularRow[];
+    totalRowsSampled: number;
+    warnings: string[];
+}
+export interface ParsedWorkbook {
+    sheets: ParsedWorkbookSheet[];
+    warnings: string[];
+}
+export declare function parseXlsxFile(filePath: string, options?: {
+    maxRows?: number;
+}): Promise<ParsedWorkbook>;
+//# sourceMappingURL=xlsx.d.ts.map

package/dist/tabular/xlsx.d.ts.map

@@ -0,0 +1 @@
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package/dist/tabular/xlsx.js

@@ -0,0 +1,190 @@
+import { readFile } from 'node:fs/promises';
+import { strFromU8, unzipSync } from 'fflate';
+const DEFAULT_MAX_ROWS = 200;
+function decodeXml(value) {
+    return value
+        .replace(/&lt;/g, '<')
+        .replace(/&gt;/g, '>')
+        .replace(/&quot;/g, '"')
+        .replace(/&apos;/g, "'")
+        .replace(/&amp;/g, '&');
+}
+function stripTags(value) {
+    return decodeXml(value.replace(/<[^>]+>/g, ''));
+}
+function getZipText(entries, name) {
+    const normalized = name.replace(/^\/+/, '');
+    const entry = entries[normalized];
+    return entry ? strFromU8(entry) : undefined;
+}
+function parseAttributes(tag) {
+    const attrs = {};
+    const pattern = /([A-Za-z_:][A-Za-z0-9_:.-]*)="([^"]*)"/g;
+    let match;
+    while ((match = pattern.exec(tag)) !== null) {
+        attrs[match[1]] = decodeXml(match[2]);
+    }
+    return attrs;
+}
+function parseSharedStrings(xml) {
+    if (!xml)
+        return [];
+    const strings = [];
+    const siPattern = /<si\b[^>]*>([\s\S]*?)<\/si>/g;
+    let match;
+    while ((match = siPattern.exec(xml)) !== null) {
+        const segment = match[1];
+        const texts = [...segment.matchAll(/<t\b[^>]*>([\s\S]*?)<\/t>/g)].map((textMatch) => decodeXml(textMatch[1]));
+        strings.push(texts.length > 0 ? texts.join('') : stripTags(segment));
+    }
+    return strings;
+}
+function parseWorkbookSheets(workbookXml) {
+    if (!workbookXml)
+        return [];
+    const sheets = [];
+    const sheetPattern = /<sheet\b([^>]+?)\/?>/g;
+    let match;
+    while ((match = sheetPattern.exec(workbookXml)) !== null) {
+        const attrs = parseAttributes(match[1]);
+        const relId = attrs['r:id'];
+        if (attrs.name && relId) {
+            sheets.push({ name: attrs.name, relId });
+        }
+    }
+    return sheets;
+}
+function parseWorkbookRelationships(relsXml) {
+    const rels = new Map();
+    if (!relsXml)
+        return rels;
+    const relPattern = /<Relationship\b([^>]+?)\/?>/g;
+    let match;
+    while ((match = relPattern.exec(relsXml)) !== null) {
+        const attrs = parseAttributes(match[1]);
+        if (attrs.Id && attrs.Target) {
+            const target = attrs.Target.startsWith('/xl/') ? attrs.Target.slice(1) : `xl/${attrs.Target.replace(/^\/+/, '')}`;
+            rels.set(attrs.Id, target.replace(/\\/g, '/'));
+        }
+    }
+    return rels;
+}
+function columnIndexFromRef(cellRef) {
+    const letters = (cellRef.match(/^[A-Z]+/i)?.[0] ?? '').toUpperCase();
+    let index = 0;
+    for (const letter of letters) {
+        index = index * 26 + (letter.charCodeAt(0) - 64);
+    }
+    return Math.max(0, index - 1);
+}
+function coerceCell(value) {
+    const trimmed = value.trim();
+    if (!trimmed)
+        return null;
+    if (/^(true|false)$/i.test(trimmed))
+        return /^true$/i.test(trimmed);
+    const parsed = Number(trimmed.replace(/,/g, ''));
+    if (Number.isFinite(parsed) && /^[+-]?(?:\d+\.?\d*|\.\d+)(?:e[+-]?\d+)?$/i.test(trimmed.replace(/,/g, ''))) {
+        return parsed;
+    }
+    return trimmed;
+}
+function getCellValue(cellXml, sharedStrings) {
+    const openTag = cellXml.match(/^<c\b([^>]*)>/)?.[1] ?? '';
+    const attrs = parseAttributes(openTag);
+    const rawValue = cellXml.match(/<v\b[^>]*>([\s\S]*?)<\/v>/)?.[1];
+    if (attrs.t === 's' && rawValue != null) {
+        return sharedStrings[Number(rawValue)] ?? null;
+    }
+    if (attrs.t === 'inlineStr') {
+        const inlineText = [...cellXml.matchAll(/<t\b[^>]*>([\s\S]*?)<\/t>/g)]
+            .map((match) => decodeXml(match[1]))
+            .join('');
+        return inlineText.trim() ? inlineText : null;
+    }
+    if (attrs.t === 'str' && rawValue != null) {
+        return decodeXml(rawValue);
+    }
+    if (attrs.t === 'b' && rawValue != null) {
+        return rawValue.trim() === '1';
+    }
+    return rawValue == null ? null : coerceCell(decodeXml(rawValue));
+}
+function uniquifyHeaders(headers) {
+    const counts = new Map();
+    return headers.map((header, index) => {
+        const base = header.trim() || `Column ${index + 1}`;
+        const count = counts.get(base) ?? 0;
+        counts.set(base, count + 1);
+        return count === 0 ? base : `${base} ${count + 1}`;
+    });
+}
+function parseWorksheet(name, xml, sharedStrings, maxRows) {
+    const warnings = [];
+    const matrix = [];
+    const rowPattern = /<row\b[^>]*>([\s\S]*?)<\/row>/g;
+    let rowMatch;
+    while ((rowMatch = rowPattern.exec(xml)) !== null) {
+        if (matrix.length > maxRows + 1) {
+            warnings.push(`Sampled first ${maxRows} data rows from sheet "${name}".`);
+            break;
+        }
+        const rowCells = [];
+        const cellPattern = /<c\b[^>]*>[\s\S]*?<\/c>/g;
+        let cellMatch;
+        while ((cellMatch = cellPattern.exec(rowMatch[1])) !== null) {
+            const ref = cellMatch[0].match(/^<c\b[^>]*\br="([^"]+)"/)?.[1];
+            const columnIndex = ref ? columnIndexFromRef(ref) : rowCells.length;
+            rowCells[columnIndex] = getCellValue(cellMatch[0], sharedStrings);
+        }
+        if (rowCells.some((cell) => cell != null && String(cell).trim().length > 0)) {
+            matrix.push(rowCells);
+        }
+    }
+    if (matrix.length === 0) {
+        return { name, rows: [], totalRowsSampled: 0, warnings: [...warnings, `Sheet "${name}" has no readable rows.`] };
+    }
+    const headers = uniquifyHeaders(matrix[0].map((cell, index) => String(cell ?? `Column ${index + 1}`).trim()));
+    const rows = matrix.slice(1, maxRows + 1).map((cells) => {
+        const row = {};
+        headers.forEach((header, index) => {
+            row[header] = cells[index] ?? null;
+        });
+        return row;
+    }).filter((row) => Object.values(row).some((cell) => cell != null && String(cell).trim().length > 0));
+    return { name, rows, totalRowsSampled: rows.length, warnings };
+}
+export async function parseXlsxFile(filePath, options = {}) {
+    const warnings = [];
+    const bytes = await readFile(filePath);
+    const entries = unzipSync(new Uint8Array(bytes));
+    const workbookXml = getZipText(entries, 'xl/workbook.xml');
+    const relsXml = getZipText(entries, 'xl/_rels/workbook.xml.rels');
+    const sharedStrings = parseSharedStrings(getZipText(entries, 'xl/sharedStrings.xml'));
+    const sheetRefs = parseWorkbookSheets(workbookXml);
+    const rels = parseWorkbookRelationships(relsXml);
+    const maxRows = Math.max(1, options.maxRows ?? DEFAULT_MAX_ROWS);
+    if (sheetRefs.length === 0) {
+        warnings.push('Workbook sheet metadata was not found.');
+    }
+    const sheetPaths = sheetRefs.length > 0
+        ? sheetRefs.map((sheet, index) => ({
+            name: sheet.name,
+            path: rels.get(sheet.relId) ?? `xl/worksheets/sheet${index + 1}.xml`,
+        }))
+        : Object.keys(entries)
+            .filter((entry) => /^xl\/worksheets\/sheet\d+\.xml$/i.test(entry))
+            .sort()
+            .map((path, index) => ({ name: `Sheet ${index + 1}`, path }));
+    const sheets = [];
+    for (const sheet of sheetPaths) {
+        const xml = getZipText(entries, sheet.path);
+        if (!xml) {
+            warnings.push(`Worksheet XML missing for "${sheet.name}".`);
+            continue;
+        }
+        sheets.push(parseWorksheet(sheet.name, xml, sharedStrings, maxRows));
+    }
+    return { sheets, warnings };
+}
+//# sourceMappingURL=xlsx.js.map

package/dist/tabular/xlsx.js.map

@@ -0,0 +1 @@
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package/dist/vision/geotech-document.d.ts

@@ -42,6 +42,10 @@ export interface GeotechDocumentInsight extends ParseSafety {
     rawLLMText: string;
     latencyMs: number;
 }
+export declare function extractGeotechDocumentDeterministicFactsFromText(pageText: string, context?: GeotechDocumentContext, options?: {
+    warning?: string;
+    forcePartial?: boolean;
+}): GeotechDocumentInsight | null;
 export declare function extractGeotechDocumentFactsFromText(pageText: string, config: LLMConfig, context?: GeotechDocumentContext): Promise<GeotechDocumentInsight>;
 export declare function interpretGeotechDocumentPage(imageBase64: string, mimeType: string, config: LLMConfig, context?: GeotechDocumentContext): Promise<GeotechDocumentInsight>;
 //# sourceMappingURL=geotech-document.d.ts.map

package/dist/vision/geotech-document.d.ts.map

@@ -1 +1 @@
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package/dist/vision/geotech-document.js

@@ -487,6 +487,43 @@ function shouldShortCircuitToDeterministicFallback(insight) {
     }
     return false;
 }
+function buildDeterministicGeotechDocumentInsight(normalizedPageText, context) {
+    const fallback = extractGeotechDocumentFallback(normalizedPageText);
+    if (!fallback.value) {
+        return null;
+    }
+    return buildGeotechDocumentInsightFromValue({
+        mergedValue: fallback.value,
+        baseStatus: fallback.baseStatus,
+        warnings: fallback.warnings,
+        normalizedPageText,
+        context,
+        rawLLMText: '',
+        latencyMs: 0,
+    });
+}
+export function extractGeotechDocumentDeterministicFactsFromText(pageText, context = {}, options = {}) {
+    const normalizedPageText = pageText.replace(/\s+/g, ' ').trim();
+    if (!normalizedPageText) {
+        return null;
+    }
+    const insight = buildDeterministicGeotechDocumentInsight(normalizedPageText, context);
+    if (!insight) {
+        return null;
+    }
+    const parseStatus = options.forcePartial && insight.parseStatus !== 'failed'
+        ? 'partial'
+        : insight.parseStatus;
+    return {
+        ...insight,
+        parseStatus,
+        confidence: options.forcePartial ? Math.min(insight.confidence, 68) : insight.confidence,
+        canAutoProceed: options.forcePartial ? false : insight.canAutoProceed,
+        warnings: options.warning
+            ? combineWarnings(insight.warnings, [options.warning])
+            : insight.warnings,
+    };
+}
 export async function extractGeotechDocumentFactsFromText(pageText, config, context = {}) {
     const normalizedPageText = pageText.replace(/\s+/g, ' ').trim();
     if (!normalizedPageText) {
@@ -514,17 +551,7 @@ export async function extractGeotechDocumentFactsFromText(pageText, config, cont
     ].filter((value) => Boolean(value));
     const sharedContext = contextParts.join('\n');
     const fallback = extractGeotechDocumentFallback(normalizedPageText);
-    const deterministicFallbackInsight = fallback.value
-        ? buildGeotechDocumentInsightFromValue({
-            mergedValue: fallback.value,
-            baseStatus: fallback.baseStatus,
-            warnings: fallback.warnings,
-            normalizedPageText,
-            context,
-            rawLLMText: '',
-            latencyMs: 0,
-        })
-        : null;
+    const deterministicFallbackInsight = buildDeterministicGeotechDocumentInsight(normalizedPageText, context);
     if (deterministicFallbackInsight && shouldShortCircuitToDeterministicFallback(deterministicFallbackInsight)) {
         const deterministicConfidence = Math.max(deterministicFallbackInsight.confidence, 72);
         return {