@genspectrum/dashboard-components 1.10.2 → 1.11.0

package/custom-elements.json

@@ -628,7 +628,7 @@
           "type": {
             "text": "StoryObj<Required<LineageFilterProps>>"
           },
-          "default": "{ render: (args) => { return html` <gs-app lapis=\"${LAPIS_URL}\"> <div class=\"max-w-(--breakpoint-lg)\"> <gs-lineage-filter lapisField=\"pangoLineage\" placeholderText=\"Enter a lineage\" value=\"B.1.1.7\" .multiSelect=${args.multiSelect} ></gs-lineage-filter> </div> </gs-app>`; }, args: { multiSelect: false, }, play: async ({ canvasElement }) => { const canvas = await withinShadowRoot(canvasElement, 'gs-lineage-filter'); await waitFor(() => { return expect(canvas.getByPlaceholderText('Enter a lineage')).toBeVisible(); }); }, }"
+          "default": "{ render: (args) => { return html` <gs-app lapis=\"${LAPIS_URL}\"> <div class=\"max-w-(--breakpoint-lg)\"> <gs-lineage-filter lapisField=\"pangoLineage\" placeholderText=\"Enter a lineage\" value=\"B.1.1.7\" .lapisFilter=${args.lapisFilter} .multiSelect=${args.multiSelect} ></gs-lineage-filter> </div> </gs-app>`; }, args: { multiSelect: false, lapisFilter: { country: 'Germany', }, }, play: async ({ canvasElement }) => { const canvas = await withinShadowRoot(canvasElement, 'gs-lineage-filter'); await waitFor(() => { return expect(canvas.getByPlaceholderText('Enter a lineage')).toBeVisible(); }); }, }"
         },
         {
           "kind": "variable",
@@ -636,7 +636,7 @@
           "type": {
             "text": "StoryObj<Required<LineageFilterProps>>"
           },
-          "default": "{ render: (args) => { return html` <gs-app lapis=\"${LAPIS_URL}\"> <div class=\"max-w-(--breakpoint-lg)\"> <gs-lineage-filter lapisField=\"pangoLineage\" placeholderText=\"Enter a lineage\" value='[\"B.1.1.7\", \"B.1.1.10\"]' .multiSelect=${args.multiSelect} ></gs-lineage-filter> </div> </gs-app>`; }, args: { multiSelect: true, }, play: async ({ canvasElement }) => { const canvas = await withinShadowRoot(canvasElement, 'gs-lineage-filter'); await waitFor(() => { return expect(canvas.getByPlaceholderText('Enter a lineage')).toBeVisible(); }); }, }"
+          "default": "{ render: (args) => { return html` <gs-app lapis=\"${LAPIS_URL}\"> <div class=\"max-w-(--breakpoint-lg)\"> <gs-lineage-filter lapisField=\"pangoLineage\" placeholderText=\"Enter a lineage\" value='[\"B.1.1.7\", \"B.1.1.10\"]' .lapisFilter=${args.lapisFilter} .multiSelect=${args.multiSelect} ></gs-lineage-filter> </div> </gs-app>`; }, args: { multiSelect: true, lapisFilter: { country: 'Germany', }, }, play: async ({ canvasElement }) => { const canvas = await withinShadowRoot(canvasElement, 'gs-lineage-filter'); await waitFor(() => { return expect(canvas.getByPlaceholderText('Enter a lineage')).toBeVisible(); }); }, }"
         },
         {
           "kind": "variable",
@@ -2717,7 +2717,7 @@
           "type": {
             "text": "Meta<Required<MutationsOverTimeProps>>"
           },
-          "default": "{ title: 'Visualization/Mutations over time', component: 'gs-mutations-over-time', argTypes: { lapisFilter: { control: 'object' }, sequenceType: { options: ['nucleotide', 'amino acid'], control: { type: 'radio' }, }, views: { options: ['grid'], control: { type: 'check' }, }, width: { control: 'text' }, height: { control: 'text' }, granularity: { options: ['day', 'week', 'month', 'year'], control: { type: 'radio' }, }, lapisDateField: { control: 'text' }, displayMutations: { control: 'object' }, initialMeanProportionInterval: { control: 'object' }, hideGaps: { control: 'boolean' }, useNewEndpoint: { control: 'boolean' }, pageSizes: { control: 'object' }, }, args: { lapisFilter: { pangoLineage: 'JN.1*', dateFrom: '2024-01-15', dateTo: '2024-07-10' }, sequenceType: 'nucleotide', views: ['grid'], width: '100%', granularity: 'month', lapisDateField: 'date', initialMeanProportionInterval: { min: 0.05, max: 0.9 }, hideGaps: false, useNewEndpoint: false, pageSizes: [10, 20, 30, 40, 50], }, parameters: withComponentDocs({ componentDocs: { opensShadowDom: true, expectsChildren: false, codeExample, }, fetchMock: {}, }), tags: ['autodocs'], }"
+          "default": "{ title: 'Visualization/Mutations over time', component: 'gs-mutations-over-time', argTypes: { lapisFilter: { control: 'object' }, sequenceType: { options: ['nucleotide', 'amino acid'], control: { type: 'radio' }, }, views: { options: ['grid'], control: { type: 'check' }, }, width: { control: 'text' }, height: { control: 'text' }, granularity: { options: ['day', 'week', 'month', 'year'], control: { type: 'radio' }, }, lapisDateField: { control: 'text' }, displayMutations: { control: 'object' }, initialMeanProportionInterval: { control: 'object' }, hideGaps: { control: 'boolean' }, useNewEndpoint: { control: 'boolean' }, pageSizes: { control: 'object' }, customColumns: { control: 'object' }, }, args: { lapisFilter: { pangoLineage: 'JN.1*', dateFrom: '2024-01-15', dateTo: '2024-07-10' }, sequenceType: 'nucleotide', views: ['grid'], width: '100%', granularity: 'month', lapisDateField: 'date', initialMeanProportionInterval: { min: 0.05, max: 0.9 }, hideGaps: false, useNewEndpoint: false, pageSizes: [10, 20, 30, 40, 50], }, parameters: withComponentDocs({ componentDocs: { opensShadowDom: true, expectsChildren: false, codeExample, }, fetchMock: {}, }), tags: ['autodocs'], }"
         },
         {
           "kind": "variable",
@@ -2774,6 +2774,14 @@
             "text": "StoryObj<Required<MutationsOverTimeProps>>"
           },
           "default": "{ ...Template, args: { ...Template, height: '700px', }, }"
+        },
+        {
+          "kind": "variable",
+          "name": "WithCustomColumns",
+          "type": {
+            "text": "StoryObj<Required<MutationsOverTimeProps>>"
+          },
+          "default": "{ ...Template, args: { ...Template.args, displayMutations: ['A19722G', 'G21641T', 'T21653-'], customColumns: [ { header: 'Jaccard Index', values: { A19722G: 0.75, G21641T: 0.92, 'T21653-': 0.58, }, }, ], }, }"
         }
       ],
       "exports": [
@@ -2840,6 +2848,14 @@
             "name": "WithFixedHeight",
             "module": "src/web-components/visualization/gs-mutations-over-time.stories.ts"
           }
+        },
+        {
+          "kind": "js",
+          "name": "WithCustomColumns",
+          "declaration": {
+            "name": "WithCustomColumns",
+            "module": "src/web-components/visualization/gs-mutations-over-time.stories.ts"
+          }
         }
       ]
     },
@@ -2971,6 +2987,16 @@
               "default": "[10, 20, 30, 40, 50]",
               "description": "The number of rows per page, which can be selected by the user.",
               "attribute": "pageSizes"
+            },
+            {
+              "kind": "field",
+              "name": "customColumns",
+              "type": {
+                "text": "{ header: string; values: Record<string, string | number> }[] | undefined"
+              },
+              "default": "undefined",
+              "description": "Custom columns to add to the grid.\nEach column has a header and a map of mutation codes to values.",
+              "attribute": "customColumns"
             }
           ],
           "events": [
@@ -3090,6 +3116,15 @@
               "default": "[10, 20, 30, 40, 50]",
               "description": "The number of rows per page, which can be selected by the user.",
               "fieldName": "pageSizes"
+            },
+            {
+              "name": "customColumns",
+              "type": {
+                "text": "{ header: string; values: Record<string, string | number> }[] | undefined"
+              },
+              "default": "undefined",
+              "description": "Custom columns to add to the grid.\nEach column has a header and a map of mutation codes to values.",
+              "fieldName": "customColumns"
             }
           ],
           "superclass": {

package/dist/components.d.ts

@@ -839,6 +839,14 @@ export declare class MutationsOverTimeComponent extends PreactLitAdapterWithGrid
      * The number of rows per page, which can be selected by the user.
      */
     pageSizes: number[] | number;
+    /**
+     * Custom columns to add to the grid.
+     * Each column has a header and a map of mutation codes to values.
+     */
+    customColumns?: {
+        header: string;
+        values: Record<string, string | number>;
+    }[];
     /* Excluded from this release type: mutationAnnotations */
     /* Excluded from this release type: mutationLinkTemplate */
     render(): JSX_2.Element;
@@ -1672,7 +1680,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutation-comparison-component': MutationComparisonComponent;
+        'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
     }
 }
 
@@ -1680,7 +1688,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutation-comparison-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1688,7 +1696,11 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-genome-data-viewer': GenomeDataViewerComponent;
+        'gs-date-range-filter': DateRangeFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.dateRangeFilterChanged]: CustomEvent<Record<string, string>>;
+        [gsEventNames.dateRangeOptionChanged]: DateRangeOptionChangedEvent;
     }
 }
 
@@ -1696,7 +1708,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-genome-data-viewer': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-date-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1704,7 +1716,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutations': MutationsComponent;
+        'gs-location-filter': LocationFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.locationChanged]: LocationChangedEvent;
     }
 }
 
@@ -1712,7 +1727,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutations': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1720,7 +1735,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
+        'gs-text-filter': TextFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.textFilterChanged]: TextFilterChangedEvent;
     }
 }
 
@@ -1728,7 +1746,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-text-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1736,7 +1754,11 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
+        'gs-lineage-filter': LineageFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.lineageFilterChanged]: LineageFilterChangedEvent;
+        [gsEventNames.lineageFilterMultiChanged]: LineageMultiFilterChangedEvent;
     }
 }
 
@@ -1744,7 +1766,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1752,7 +1774,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-aggregate': AggregateComponent;
+        'gs-mutation-filter': MutationFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.mutationFilterChanged]: CustomEvent<MutationsFilter>;
     }
 }
 
@@ -1760,7 +1785,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1768,7 +1793,11 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
+        'gs-number-range-filter': NumberRangeFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        [gsEventNames.numberRangeFilterChanged]: NumberRangeFilterChangedEvent;
+        [gsEventNames.numberRangeValueChanged]: NumberRangeValueChangedEvent;
     }
 }
 
@@ -1776,7 +1805,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-number-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1784,7 +1813,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-sequences-by-location': SequencesByLocationComponent;
+        'gs-genome-data-viewer': GenomeDataViewerComponent;
     }
 }
 
@@ -1792,7 +1821,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-genome-data-viewer': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1800,7 +1829,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutations-over-time': MutationsOverTimeComponent;
+        'gs-mutation-comparison-component': MutationComparisonComponent;
     }
 }
 
@@ -1808,7 +1837,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutation-comparison-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1816,7 +1845,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-statistics': StatisticsComponent;
+        'gs-mutations': MutationsComponent;
     }
 }
 
@@ -1824,7 +1853,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutations': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1832,7 +1861,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
+        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
     }
 }
 
@@ -1840,7 +1869,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1848,11 +1877,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-date-range-filter': DateRangeFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.dateRangeFilterChanged]: CustomEvent<Record<string, string>>;
-        [gsEventNames.dateRangeOptionChanged]: DateRangeOptionChangedEvent;
+        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
     }
 }
 
@@ -1860,7 +1885,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-date-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1868,10 +1893,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-location-filter': LocationFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.locationChanged]: LocationChangedEvent;
+        'gs-aggregate': AggregateComponent;
     }
 }
 
@@ -1879,7 +1901,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1887,10 +1909,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-text-filter': TextFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.textFilterChanged]: TextFilterChangedEvent;
+        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
     }
 }
 
@@ -1898,7 +1917,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-text-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1906,10 +1925,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutation-filter': MutationFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.mutationFilterChanged]: CustomEvent<MutationsFilter>;
+        'gs-mutations-over-time': MutationsOverTimeComponent;
     }
 }
 
@@ -1917,7 +1933,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1925,11 +1941,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-lineage-filter': LineageFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.lineageFilterChanged]: LineageFilterChangedEvent;
-        [gsEventNames.lineageFilterMultiChanged]: LineageMultiFilterChangedEvent;
+        'gs-sequences-by-location': SequencesByLocationComponent;
     }
 }
 
@@ -1937,7 +1949,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1945,11 +1957,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-number-range-filter': NumberRangeFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        [gsEventNames.numberRangeFilterChanged]: NumberRangeFilterChangedEvent;
-        [gsEventNames.numberRangeValueChanged]: NumberRangeValueChangedEvent;
+        'gs-statistics': StatisticsComponent;
     }
 }
 
@@ -1957,7 +1965,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-number-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }