@genspectrum/dashboard-components 0.6.18 → 0.7.0

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Files changed (118) hide show
  1. package/README.md +5 -12
  2. package/custom-elements.json +22 -22
  3. package/dist/assets/mutationOverTimeWorker-BOCXtKzd.js.map +1 -0
  4. package/dist/dashboard-components.js +301 -302
  5. package/dist/dashboard-components.js.map +1 -1
  6. package/dist/genspectrum-components.d.ts +60 -10
  7. package/dist/style.css +3 -2
  8. package/package.json +13 -4
  9. package/src/index.ts +1 -0
  10. package/src/operator/FetchInsertionsOperator.ts +2 -2
  11. package/src/operator/FetchSubstitutionsOrDeletionsOperator.ts +3 -3
  12. package/src/preact/dateRangeSelector/computeInitialValues.spec.ts +53 -38
  13. package/src/preact/dateRangeSelector/computeInitialValues.ts +17 -23
  14. package/src/preact/dateRangeSelector/date-range-selector.stories.tsx +46 -32
  15. package/src/preact/dateRangeSelector/date-range-selector.tsx +24 -26
  16. package/src/preact/dateRangeSelector/dateRangeOption.ts +65 -0
  17. package/src/preact/dateRangeSelector/selectableOptions.ts +17 -66
  18. package/src/preact/mutationComparison/fetchMutationData.spec.ts +3 -3
  19. package/src/preact/mutationComparison/getMutationComparisonTableData.spec.ts +11 -11
  20. package/src/preact/mutationComparison/getMutationComparisonTableData.ts +4 -4
  21. package/src/preact/mutationComparison/mutation-comparison-table.tsx +2 -2
  22. package/src/preact/mutationFilter/mutation-filter.tsx +27 -18
  23. package/src/preact/mutationFilter/parseAndValidateMutation.ts +4 -4
  24. package/src/preact/mutationFilter/parseMutation.spec.ts +17 -17
  25. package/src/preact/mutations/getInsertionsTableData.spec.ts +3 -3
  26. package/src/preact/mutations/getMutationsGridData.spec.ts +9 -9
  27. package/src/preact/mutations/getMutationsTableData.spec.ts +7 -7
  28. package/src/preact/mutations/mutations-insertions-table.tsx +3 -3
  29. package/src/preact/mutations/mutations-table.tsx +3 -3
  30. package/src/preact/mutationsOverTime/MutationOverTimeData.ts +20 -0
  31. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutationsByDay.ts +45686 -0
  32. package/src/preact/mutationsOverTime/__mockData__/byWeek.ts +58989 -0
  33. package/src/preact/mutationsOverTime/__mockData__/defaultMockData.ts +103991 -0
  34. package/src/preact/mutationsOverTime/__mockData__/mockConversion.ts +54 -0
  35. package/src/preact/mutationsOverTime/__mockData__/showsMessageWhenTooManyMutations.ts +63690 -0
  36. package/src/preact/mutationsOverTime/getFilteredMutationsOverTime.spec.ts +177 -161
  37. package/src/preact/mutationsOverTime/getFilteredMutationsOverTimeData.ts +17 -59
  38. package/src/preact/mutationsOverTime/mutationOverTimeWorker.mock.ts +27 -0
  39. package/src/preact/mutationsOverTime/mutationOverTimeWorker.ts +29 -0
  40. package/src/preact/mutationsOverTime/mutations-over-time-grid.tsx +13 -14
  41. package/src/preact/mutationsOverTime/mutations-over-time.stories.tsx +9 -334
  42. package/src/preact/mutationsOverTime/mutations-over-time.tsx +59 -54
  43. package/src/preact/numberSequencesOverTime/getNumberOfSequencesOverTimeTableData.ts +3 -3
  44. package/src/preact/prevalenceOverTime/getPrevalenceOverTimeTableData.spec.ts +5 -5
  45. package/src/preact/prevalenceOverTime/prevalence-over-time-bubble-chart.tsx +1 -1
  46. package/src/preact/relativeGrowthAdvantage/relative-growth-advantage-chart.tsx +2 -2
  47. package/src/preact/shared/sort/sortInsertions.spec.ts +11 -11
  48. package/src/preact/shared/sort/sortInsertions.ts +2 -2
  49. package/src/preact/shared/sort/sortSubstitutionsAndDeletions.spec.ts +13 -13
  50. package/src/preact/shared/sort/sortSubstitutionsAndDeletions.ts +7 -4
  51. package/src/preact/webWorkers/useWebWorker.ts +51 -0
  52. package/src/preact/webWorkers/workerFunction.ts +14 -0
  53. package/src/query/queryAggregatedDataOverTime.ts +3 -3
  54. package/src/query/queryMutationsOverTime.spec.ts +272 -51
  55. package/src/query/queryMutationsOverTime.ts +114 -47
  56. package/src/query/queryPrevalenceOverTime.ts +2 -2
  57. package/src/query/queryRelativeGrowthAdvantage.ts +3 -3
  58. package/src/types.ts +25 -5
  59. package/src/utils/map2d.spec.ts +79 -12
  60. package/src/utils/map2d.ts +25 -5
  61. package/src/utils/mutations.spec.ts +20 -20
  62. package/src/utils/mutations.ts +80 -17
  63. package/src/utils/sort.ts +5 -2
  64. package/src/utils/temporal.spec.ts +27 -24
  65. package/src/utils/{temporal.ts → temporalClass.ts} +170 -72
  66. package/src/utils/temporalTestHelpers.ts +3 -3
  67. package/src/web-components/input/gs-date-range-selector.stories.ts +16 -28
  68. package/src/web-components/input/gs-date-range-selector.tsx +17 -32
  69. package/src/web-components/introduction.mdx +46 -0
  70. package/src/web-components/visualization/gs-mutations-over-time.stories.ts +6 -699
  71. package/src/web-components/visualization/gs-mutations-over-time.tsx +2 -2
  72. package/standalone-bundle/dashboard-components.js +12011 -12778
  73. package/standalone-bundle/dashboard-components.js.map +1 -1
  74. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_01.json +0 -13
  75. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_02.json +0 -13
  76. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_03.json +0 -13
  77. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_04.json +0 -13
  78. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_05.json +0 -13
  79. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_06.json +0 -13
  80. package/src/preact/mutationsOverTime/__mockData__/aggregated_2024_07.json +0 -13
  81. package/src/preact/mutationsOverTime/__mockData__/aggregated_20_01_2024.json +0 -13
  82. package/src/preact/mutationsOverTime/__mockData__/aggregated_21_01_2024.json +0 -13
  83. package/src/preact/mutationsOverTime/__mockData__/aggregated_22_01_2024.json +0 -13
  84. package/src/preact/mutationsOverTime/__mockData__/aggregated_23_01_2024.json +0 -13
  85. package/src/preact/mutationsOverTime/__mockData__/aggregated_24_01_2024.json +0 -13
  86. package/src/preact/mutationsOverTime/__mockData__/aggregated_25_01_2024.json +0 -13
  87. package/src/preact/mutationsOverTime/__mockData__/aggregated_26_01_2024.json +0 -13
  88. package/src/preact/mutationsOverTime/__mockData__/aggregated_byDay.json +0 -38
  89. package/src/preact/mutationsOverTime/__mockData__/aggregated_byWeek.json +0 -122
  90. package/src/preact/mutationsOverTime/__mockData__/aggregated_date.json +0 -642
  91. package/src/preact/mutationsOverTime/__mockData__/aggregated_tooManyMutations.json +0 -1470
  92. package/src/preact/mutationsOverTime/__mockData__/aggregated_tooManyMutations_total.json +0 -13
  93. package/src/preact/mutationsOverTime/__mockData__/aggregated_week3_2024.json +0 -13
  94. package/src/preact/mutationsOverTime/__mockData__/aggregated_week4_2024.json +0 -13
  95. package/src/preact/mutationsOverTime/__mockData__/aggregated_week5_2024.json +0 -13
  96. package/src/preact/mutationsOverTime/__mockData__/aggregated_week6_2024.json +0 -13
  97. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_20_01_2024.json +0 -6778
  98. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_21_01_2024.json +0 -7129
  99. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_22_01_2024.json +0 -4681
  100. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_23_01_2024.json +0 -10738
  101. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_24_01_2024.json +0 -11710
  102. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_25_01_2024.json +0 -11557
  103. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_26_01_2024.json +0 -8596
  104. package/src/preact/mutationsOverTime/__mockData__/aminoAcidMutations_byDayOverall.json +0 -4726
  105. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_01.json +0 -1747
  106. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_02.json +0 -1774
  107. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_03.json +0 -1819
  108. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_04.json +0 -1864
  109. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_05.json +0 -1927
  110. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_06.json +0 -1864
  111. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_07.json +0 -9
  112. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_byMonthOverall.json +0 -11143
  113. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_byWeekOverall.json +0 -9154
  114. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_tooManyMutations.json +0 -16453
  115. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_week3_2024.json +0 -8812
  116. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_week4_2024.json +0 -9730
  117. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_week5_2024.json +0 -9865
  118. package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_week6_2024.json +0 -11314
@@ -4,54 +4,7 @@ import { html } from 'lit';
4
4
  import './gs-mutations-over-time';
5
5
  import '../app';
6
6
  import { withComponentDocs } from '../../../.storybook/ComponentDocsBlock';
7
- import {
8
- AGGREGATED_ENDPOINT,
9
- AMINO_ACID_MUTATIONS_ENDPOINT,
10
- LAPIS_URL,
11
- NUCLEOTIDE_MUTATIONS_ENDPOINT,
12
- } from '../../constants';
13
- import aggregated_01 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_01.json';
14
- import aggregated_02 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_02.json';
15
- import aggregated_03 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_03.json';
16
- import aggregated_04 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_04.json';
17
- import aggregated_05 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_05.json';
18
- import aggregated_06 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_06.json';
19
- import aggregated_07 from '../../preact/mutationsOverTime/__mockData__/aggregated_2024_07.json';
20
- import aggregated_20_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_20_01_2024.json';
21
- import aggregated_21_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_21_01_2024.json';
22
- import aggregated_22_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_22_01_2024.json';
23
- import aggregated_23_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_23_01_2024.json';
24
- import aggregated_24_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_24_01_2024.json';
25
- import aggregated_25_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_25_01_2024.json';
26
- import aggregated_26_01_2024 from '../../preact/mutationsOverTime/__mockData__/aggregated_26_01_2024.json';
27
- import aggregated_byDay from '../../preact/mutationsOverTime/__mockData__/aggregated_byDay.json';
28
- import aggregated_byWeek from '../../preact/mutationsOverTime/__mockData__/aggregated_byWeek.json';
29
- import aggregated_date from '../../preact/mutationsOverTime/__mockData__/aggregated_date.json';
30
- import aggregated_week3 from '../../preact/mutationsOverTime/__mockData__/aggregated_week3_2024.json';
31
- import aggregated_week4 from '../../preact/mutationsOverTime/__mockData__/aggregated_week4_2024.json';
32
- import aggregated_week5 from '../../preact/mutationsOverTime/__mockData__/aggregated_week5_2024.json';
33
- import aggregated_week6 from '../../preact/mutationsOverTime/__mockData__/aggregated_week6_2024.json';
34
- import aminoAcidMutations_20_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_20_01_2024.json';
35
- import aminoAcidMutations_21_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_21_01_2024.json';
36
- import aminoAcidMutations_22_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_22_01_2024.json';
37
- import aminoAcidMutations_23_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_23_01_2024.json';
38
- import aminoAcidMutations_24_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_24_01_2024.json';
39
- import aminoAcidMutations_25_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_25_01_2024.json';
40
- import aminoAcidMutations_26_01_2024 from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_26_01_2024.json';
41
- import aminoAcidMutations_byDayOverall from '../../preact/mutationsOverTime/__mockData__/aminoAcidMutations_byDayOverall.json';
42
- import nucleotideMutation_01 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_01.json';
43
- import nucleotideMutation_02 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_02.json';
44
- import nucleotideMutation_03 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_03.json';
45
- import nucleotideMutation_04 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_04.json';
46
- import nucleotideMutation_05 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_05.json';
47
- import nucleotideMutation_06 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_06.json';
48
- import nucleotideMutation_07 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_07.json';
49
- import nucleotideMutations_byMonthOverall from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_byMonthOverall.json';
50
- import nucleotideMutations_byWeekOverall from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_byWeekOverall.json';
51
- import nucleotideMutation_week3 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_week3_2024.json';
52
- import nucleotideMutation_week4 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_week4_2024.json';
53
- import nucleotideMutation_week5 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_week5_2024.json';
54
- import nucleotideMutation_week6 from '../../preact/mutationsOverTime/__mockData__/nucleotideMutations_week6_2024.json';
7
+ import { LAPIS_URL } from '../../constants';
55
8
  import { type MutationsOverTimeProps } from '../../preact/mutationsOverTime/mutations-over-time';
56
9
 
57
10
  const codeExample = String.raw`
@@ -101,6 +54,7 @@ const meta: Meta<Required<MutationsOverTimeProps>> = {
101
54
  expectsChildren: false,
102
55
  codeExample,
103
56
  },
57
+ fetchMock: {},
104
58
  }),
105
59
  tags: ['autodocs'],
106
60
  };
@@ -123,273 +77,12 @@ const Template: StoryObj<Required<MutationsOverTimeProps>> = {
123
77
  `,
124
78
  };
125
79
 
80
+ // This test uses mock data: defaultMockData.ts (through mutationOverTimeWorker.mock.ts)
126
81
  export const ByMonth: StoryObj<Required<MutationsOverTimeProps>> = {
127
82
  ...Template,
128
- parameters: {
129
- fetchMock: {
130
- mocks: [
131
- {
132
- matcher: {
133
- name: 'aggregated_dates',
134
- url: AGGREGATED_ENDPOINT,
135
- body: {
136
- dateFrom: '2024-01-15',
137
- dateTo: '2024-07-10',
138
- fields: ['date'],
139
- pangoLineage: 'JN.1*',
140
- },
141
- },
142
- response: {
143
- status: 200,
144
- body: aggregated_date,
145
- },
146
- },
147
- {
148
- matcher: {
149
- name: 'aggregated_01',
150
- url: AGGREGATED_ENDPOINT,
151
- body: {
152
- dateFrom: '2024-01-01',
153
- dateTo: '2024-01-31',
154
- fields: [],
155
- pangoLineage: 'JN.1*',
156
- },
157
- },
158
- response: {
159
- status: 200,
160
- body: aggregated_01,
161
- },
162
- },
163
- {
164
- matcher: {
165
- name: 'aggregated_02',
166
- url: AGGREGATED_ENDPOINT,
167
- body: {
168
- dateFrom: '2024-02-01',
169
- dateTo: '2024-02-29',
170
- fields: [],
171
- pangoLineage: 'JN.1*',
172
- },
173
- },
174
- response: {
175
- status: 200,
176
- body: aggregated_02,
177
- },
178
- },
179
- {
180
- matcher: {
181
- name: 'aggregated_03',
182
- url: AGGREGATED_ENDPOINT,
183
- body: {
184
- dateFrom: '2024-03-01',
185
- dateTo: '2024-03-31',
186
- fields: [],
187
- pangoLineage: 'JN.1*',
188
- },
189
- },
190
- response: {
191
- status: 200,
192
- body: aggregated_03,
193
- },
194
- },
195
- {
196
- matcher: {
197
- name: 'aggregated_04',
198
- url: AGGREGATED_ENDPOINT,
199
- body: {
200
- dateFrom: '2024-04-01',
201
- dateTo: '2024-04-30',
202
- fields: [],
203
- pangoLineage: 'JN.1*',
204
- },
205
- },
206
- response: {
207
- status: 200,
208
- body: aggregated_04,
209
- },
210
- },
211
- {
212
- matcher: {
213
- name: 'aggregated_05',
214
- url: AGGREGATED_ENDPOINT,
215
- body: {
216
- dateFrom: '2024-05-01',
217
- dateTo: '2024-05-31',
218
- fields: [],
219
- pangoLineage: 'JN.1*',
220
- },
221
- },
222
- response: {
223
- status: 200,
224
- body: aggregated_05,
225
- },
226
- },
227
- {
228
- matcher: {
229
- name: 'aggregated_06',
230
- url: AGGREGATED_ENDPOINT,
231
- body: {
232
- dateFrom: '2024-06-01',
233
- dateTo: '2024-06-30',
234
- fields: [],
235
- pangoLineage: 'JN.1*',
236
- },
237
- },
238
- response: {
239
- status: 200,
240
- body: aggregated_06,
241
- },
242
- },
243
- {
244
- matcher: {
245
- name: 'aggregated_07',
246
- url: AGGREGATED_ENDPOINT,
247
- body: {
248
- dateFrom: '2024-07-01',
249
- dateTo: '2024-07-31',
250
- fields: [],
251
- pangoLineage: 'JN.1*',
252
- },
253
- },
254
- response: {
255
- status: 200,
256
- body: aggregated_07,
257
- },
258
- },
259
- {
260
- matcher: {
261
- name: 'nucleotideMutations_overall',
262
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
263
- body: {
264
- pangoLineage: 'JN.1*',
265
- dateFrom: '2024-01-15',
266
- dateTo: '2024-07-10',
267
- minProportion: 0.001,
268
- },
269
- },
270
- response: {
271
- status: 200,
272
- body: nucleotideMutations_byMonthOverall,
273
- },
274
- },
275
- {
276
- matcher: {
277
- name: 'nucleotideMutations_01',
278
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
279
- body: {
280
- pangoLineage: 'JN.1*',
281
- dateFrom: '2024-01-01',
282
- dateTo: '2024-01-31',
283
- minProportion: 0.001,
284
- },
285
- },
286
- response: {
287
- status: 200,
288
- body: nucleotideMutation_01,
289
- },
290
- },
291
- {
292
- matcher: {
293
- name: 'nucleotideMutations_02',
294
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
295
- body: {
296
- pangoLineage: 'JN.1*',
297
- dateFrom: '2024-02-01',
298
- dateTo: '2024-02-29',
299
- minProportion: 0.001,
300
- },
301
- },
302
- response: {
303
- status: 200,
304
- body: nucleotideMutation_02,
305
- },
306
- },
307
- {
308
- matcher: {
309
- name: 'nucleotideMutations_03',
310
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
311
- body: {
312
- pangoLineage: 'JN.1*',
313
- dateFrom: '2024-03-01',
314
- dateTo: '2024-03-31',
315
- minProportion: 0.001,
316
- },
317
- response: {
318
- status: 200,
319
- body: nucleotideMutation_03,
320
- },
321
- },
322
- },
323
- {
324
- matcher: {
325
- name: 'nucleotideMutations_04',
326
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
327
- body: {
328
- pangoLineage: 'JN.1*',
329
- dateFrom: '2024-04-01',
330
- dateTo: '2024-04-30',
331
- minProportion: 0.001,
332
- },
333
- response: {
334
- status: 200,
335
- body: nucleotideMutation_04,
336
- },
337
- },
338
- },
339
- {
340
- matcher: {
341
- name: 'nucleotideMutations_05',
342
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
343
- body: {
344
- pangoLineage: 'JN.1*',
345
- dateFrom: '2024-05-01',
346
- dateTo: '2024-05-31',
347
- minProportion: 0.001,
348
- },
349
- response: {
350
- status: 200,
351
- body: nucleotideMutation_05,
352
- },
353
- },
354
- },
355
- {
356
- matcher: {
357
- name: 'nucleotideMutations_06',
358
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
359
- body: {
360
- pangoLineage: 'JN.1*',
361
- dateFrom: '2024-06-01',
362
- dateTo: '2024-06-30',
363
- minProportion: 0.001,
364
- },
365
- response: {
366
- status: 200,
367
- body: nucleotideMutation_06,
368
- },
369
- },
370
- },
371
-
372
- {
373
- matcher: {
374
- name: 'nucleotideMutations_07',
375
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
376
- body: {
377
- pangoLineage: 'JN.1*',
378
- dateFrom: '2024-07-01',
379
- dateTo: '2024-07-31',
380
- minProportion: 0.001,
381
- },
382
- response: {
383
- status: 200,
384
- body: nucleotideMutation_07,
385
- },
386
- },
387
- },
388
- ],
389
- },
390
- },
391
83
  };
392
84
 
85
+ // This test uses mock data: byWeek.ts (through mutationOverTimeWorker.mock.ts)
393
86
  export const ByWeek: StoryObj<Required<MutationsOverTimeProps>> = {
394
87
  ...Template,
395
88
  args: {
@@ -397,174 +90,9 @@ export const ByWeek: StoryObj<Required<MutationsOverTimeProps>> = {
397
90
  lapisFilter: { pangoLineage: 'JN.1*', dateFrom: '2024-01-15', dateTo: '2024-02-11' },
398
91
  granularity: 'week',
399
92
  },
400
- parameters: {
401
- fetchMock: {
402
- mocks: [
403
- {
404
- matcher: {
405
- name: 'aggregated_dates',
406
- url: AGGREGATED_ENDPOINT,
407
- body: {
408
- dateFrom: '2024-01-15',
409
- dateTo: '2024-02-11',
410
- fields: ['date'],
411
- pangoLineage: 'JN.1*',
412
- },
413
- },
414
- response: {
415
- status: 200,
416
- body: aggregated_byWeek,
417
- },
418
- },
419
- {
420
- matcher: {
421
- name: 'aggregated_week3',
422
- url: AGGREGATED_ENDPOINT,
423
- body: {
424
- dateFrom: '2024-01-15',
425
- dateTo: '2024-01-21',
426
- fields: [],
427
- pangoLineage: 'JN.1*',
428
- },
429
- },
430
- response: {
431
- status: 200,
432
- body: aggregated_week3,
433
- },
434
- },
435
- {
436
- matcher: {
437
- name: 'aggregated_week4',
438
- url: AGGREGATED_ENDPOINT,
439
- body: {
440
- dateFrom: '2024-01-22',
441
- dateTo: '2024-01-28',
442
- fields: [],
443
- pangoLineage: 'JN.1*',
444
- },
445
- },
446
- response: {
447
- status: 200,
448
- body: aggregated_week4,
449
- },
450
- },
451
- {
452
- matcher: {
453
- name: 'aggregated_week5',
454
- url: AGGREGATED_ENDPOINT,
455
- body: {
456
- dateFrom: '2024-01-29',
457
- dateTo: '2024-02-04',
458
- fields: [],
459
- pangoLineage: 'JN.1*',
460
- },
461
- },
462
- response: {
463
- status: 200,
464
- body: aggregated_week5,
465
- },
466
- },
467
- {
468
- matcher: {
469
- name: 'aggregated_week6',
470
- url: AGGREGATED_ENDPOINT,
471
- body: {
472
- dateFrom: '2024-02-05',
473
- dateTo: '2024-02-11',
474
- fields: [],
475
- pangoLineage: 'JN.1*',
476
- },
477
- },
478
- response: {
479
- status: 200,
480
- body: aggregated_week6,
481
- },
482
- },
483
- {
484
- matcher: {
485
- name: 'nucleotideMutation_overall',
486
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
487
- body: {
488
- pangoLineage: 'JN.1*',
489
- dateFrom: '2024-01-15',
490
- dateTo: '2024-02-11',
491
- minProportion: 0.001,
492
- },
493
- },
494
- response: {
495
- status: 200,
496
- body: nucleotideMutations_byWeekOverall,
497
- },
498
- },
499
- {
500
- matcher: {
501
- name: 'nucleotideMutation_week3',
502
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
503
- body: {
504
- pangoLineage: 'JN.1*',
505
- dateFrom: '2024-01-15',
506
- dateTo: '2024-01-21',
507
- minProportion: 0.001,
508
- },
509
- },
510
- response: {
511
- status: 200,
512
- body: nucleotideMutation_week3,
513
- },
514
- },
515
- {
516
- matcher: {
517
- name: 'nucleotideMutation_week4',
518
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
519
- body: {
520
- pangoLineage: 'JN.1*',
521
- dateFrom: '2024-01-22',
522
- dateTo: '2024-01-28',
523
- minProportion: 0.001,
524
- },
525
- },
526
- response: {
527
- status: 200,
528
- body: nucleotideMutation_week4,
529
- },
530
- },
531
- {
532
- matcher: {
533
- name: 'nucleotideMutation_week5',
534
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
535
- body: {
536
- pangoLineage: 'JN.1*',
537
- dateFrom: '2024-01-29',
538
- dateTo: '2024-02-04',
539
- minProportion: 0.001,
540
- },
541
- },
542
- response: {
543
- status: 200,
544
- body: nucleotideMutation_week5,
545
- },
546
- },
547
- {
548
- matcher: {
549
- name: 'nucleotideMutation_week6',
550
- url: NUCLEOTIDE_MUTATIONS_ENDPOINT,
551
- body: {
552
- pangoLineage: 'JN.1*',
553
- dateFrom: '2024-02-05',
554
- dateTo: '2024-02-11',
555
- minProportion: 0.001,
556
- },
557
- },
558
- response: {
559
- status: 200,
560
- body: nucleotideMutation_week6,
561
- },
562
- },
563
- ],
564
- },
565
- },
566
93
  };
567
94
 
95
+ // This test uses mock data: aminoAcidMutationsByDay.ts (through mutationOverTimeWorker.mock.ts)
568
96
  export const AminoAcidMutationsByDay: StoryObj<Required<MutationsOverTimeProps>> = {
569
97
  ...Template,
570
98
  args: {
@@ -573,230 +101,9 @@ export const AminoAcidMutationsByDay: StoryObj<Required<MutationsOverTimeProps>>
573
101
  granularity: 'day',
574
102
  sequenceType: 'amino acid',
575
103
  },
576
- parameters: {
577
- fetchMock: {
578
- mocks: [
579
- {
580
- matcher: {
581
- name: 'aggregated_byDay',
582
- url: AGGREGATED_ENDPOINT,
583
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-20', dateTo: '2024-01-26', fields: ['date'] },
584
- },
585
- response: {
586
- status: 200,
587
- body: aggregated_byDay,
588
- },
589
- },
590
- {
591
- matcher: {
592
- name: 'aggregated_20_01_2024',
593
- url: AGGREGATED_ENDPOINT,
594
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-20', dateTo: '2024-01-20', fields: [] },
595
- },
596
- response: {
597
- status: 200,
598
- body: aggregated_20_01_2024,
599
- },
600
- },
601
- {
602
- matcher: {
603
- name: 'aggregated_21_01_2024',
604
- url: AGGREGATED_ENDPOINT,
605
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-21', dateTo: '2024-01-21', fields: [] },
606
- },
607
- response: {
608
- status: 200,
609
- body: aggregated_21_01_2024,
610
- },
611
- },
612
- {
613
- matcher: {
614
- name: 'aggregated_22_01_2024',
615
- url: AGGREGATED_ENDPOINT,
616
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-22', dateTo: '2024-01-22', fields: [] },
617
- },
618
- response: {
619
- status: 200,
620
- body: aggregated_22_01_2024,
621
- },
622
- },
623
- {
624
- matcher: {
625
- name: 'aggregated_23_01_2024',
626
- url: AGGREGATED_ENDPOINT,
627
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-23', dateTo: '2024-01-23', fields: [] },
628
- },
629
- response: {
630
- status: 200,
631
- body: aggregated_23_01_2024,
632
- },
633
- },
634
- {
635
- matcher: {
636
- name: 'aggregated_24_01_2024',
637
- url: AGGREGATED_ENDPOINT,
638
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-24', dateTo: '2024-01-24', fields: [] },
639
- },
640
- response: {
641
- status: 200,
642
- body: aggregated_24_01_2024,
643
- },
644
- },
645
- {
646
- matcher: {
647
- name: 'aggregated_25_01_2024',
648
- url: AGGREGATED_ENDPOINT,
649
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-25', dateTo: '2024-01-25', fields: [] },
650
- },
651
- response: {
652
- status: 200,
653
- body: aggregated_25_01_2024,
654
- },
655
- },
656
- {
657
- matcher: {
658
- name: 'aggregated_26_01_2024',
659
- url: AGGREGATED_ENDPOINT,
660
- body: { pangoLineage: 'JN.1*', dateFrom: '2024-01-26', dateTo: '2024-01-26', fields: [] },
661
- },
662
- response: {
663
- status: 200,
664
- body: aggregated_26_01_2024,
665
- },
666
- },
667
- {
668
- matcher: {
669
- name: 'aminoAcidMutations_overall',
670
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
671
- body: {
672
- pangoLineage: 'JN.1*',
673
- dateFrom: '2024-01-20',
674
- dateTo: '2024-01-26',
675
- minProportion: 0.001,
676
- },
677
- },
678
- response: {
679
- status: 200,
680
- body: aminoAcidMutations_byDayOverall,
681
- },
682
- },
683
- {
684
- matcher: {
685
- name: 'aminoAcidMutations_20_01_2024',
686
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
687
- body: {
688
- pangoLineage: 'JN.1*',
689
- dateFrom: '2024-01-20',
690
- dateTo: '2024-01-20',
691
- minProportion: 0.001,
692
- },
693
- },
694
- response: {
695
- status: 200,
696
- body: aminoAcidMutations_20_01_2024,
697
- },
698
- },
699
- {
700
- matcher: {
701
- name: 'aminoAcidMutations_21_01_2024',
702
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
703
- body: {
704
- pangoLineage: 'JN.1*',
705
- dateFrom: '2024-01-21',
706
- dateTo: '2024-01-21',
707
- minProportion: 0.001,
708
- },
709
- },
710
- response: {
711
- status: 200,
712
- body: aminoAcidMutations_21_01_2024,
713
- },
714
- },
715
- {
716
- matcher: {
717
- name: 'aminoAcidMutations_22_01_2024',
718
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
719
- body: {
720
- pangoLineage: 'JN.1*',
721
- dateFrom: '2024-01-22',
722
- dateTo: '2024-01-22',
723
- minProportion: 0.001,
724
- },
725
- },
726
- response: {
727
- status: 200,
728
- body: aminoAcidMutations_22_01_2024,
729
- },
730
- },
731
- {
732
- matcher: {
733
- name: 'aminoAcidMutations_23_01_2024',
734
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
735
- body: {
736
- pangoLineage: 'JN.1*',
737
- dateFrom: '2024-01-23',
738
- dateTo: '2024-01-23',
739
- minProportion: 0.001,
740
- },
741
- },
742
- response: {
743
- status: 200,
744
- body: aminoAcidMutations_23_01_2024,
745
- },
746
- },
747
- {
748
- matcher: {
749
- name: 'aminoAcidMutations_24_01_2024',
750
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
751
- body: {
752
- pangoLineage: 'JN.1*',
753
- dateFrom: '2024-01-24',
754
- dateTo: '2024-01-24',
755
- minProportion: 0.001,
756
- },
757
- },
758
- response: {
759
- status: 200,
760
- body: aminoAcidMutations_24_01_2024,
761
- },
762
- },
763
- {
764
- matcher: {
765
- name: 'aminoAcidMutations_25_01_2024',
766
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
767
- body: {
768
- pangoLineage: 'JN.1*',
769
- dateFrom: '2024-01-25',
770
- dateTo: '2024-01-25',
771
- minProportion: 0.001,
772
- },
773
- },
774
- response: {
775
- status: 200,
776
- body: aminoAcidMutations_25_01_2024,
777
- },
778
- },
779
- {
780
- matcher: {
781
- name: 'aminoAcidMutations_26_01_2024',
782
- url: AMINO_ACID_MUTATIONS_ENDPOINT,
783
- body: {
784
- pangoLineage: 'JN.1*',
785
- dateFrom: '2024-01-26',
786
- dateTo: '2024-01-26',
787
- minProportion: 0.001,
788
- },
789
- },
790
- response: {
791
- status: 200,
792
- body: aminoAcidMutations_26_01_2024,
793
- },
794
- },
795
- ],
796
- },
797
- },
798
104
  };
799
105
 
106
+ // This test uses mock data: defaultMockData.ts (through mutationOverTimeWorker.mock.ts)
800
107
  export const HideProportionOnSmallScreen: StoryObj<Required<MutationsOverTimeProps>> = {
801
108
  ...ByMonth,
802
109
  args: {