@genspectrum/dashboard-components 0.6.1 → 0.6.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/custom-elements.json +228 -0
- package/dist/dashboard-components.js +778 -244
- package/dist/dashboard-components.js.map +1 -1
- package/dist/genspectrum-components.d.ts +119 -9
- package/dist/style.css +7 -4
- package/package.json +3 -1
- package/src/constants.ts +1 -1
- package/src/lapisApi/lapisTypes.ts +1 -0
- package/src/operator/FillMissingOperator.spec.ts +3 -1
- package/src/operator/FillMissingOperator.ts +4 -2
- package/src/preact/mutationComparison/queryMutationData.ts +12 -4
- package/src/preact/mutationsOverTime/__mockData__/aggregated_date.json +642 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_01.json +1747 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_02.json +1774 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_03.json +1819 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_04.json +1864 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_05.json +1927 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_06.json +1864 -0
- package/src/preact/mutationsOverTime/__mockData__/nucleotideMutations_2024_07.json +9 -0
- package/src/preact/mutationsOverTime/getFilteredMutationsOverTime.spec.ts +86 -0
- package/src/preact/mutationsOverTime/getFilteredMutationsOverTimeData.ts +62 -0
- package/src/preact/mutationsOverTime/mutations-over-time-grid.tsx +92 -0
- package/src/preact/mutationsOverTime/mutations-over-time.stories.tsx +206 -0
- package/src/preact/mutationsOverTime/mutations-over-time.tsx +170 -0
- package/src/preact/numberSequencesOverTime/getNumberOfSequencesOverTimeTableData.ts +1 -1
- package/src/preact/prevalenceOverTime/prevalence-over-time.stories.tsx +1 -0
- package/src/preact/shared/table/formatProportion.ts +2 -2
- package/src/query/queryAggregatedDataOverTime.ts +8 -33
- package/src/query/queryMutationsOverTime.spec.ts +352 -0
- package/src/query/queryMutationsOverTime.ts +164 -0
- package/src/query/queryNumberOfSequencesOverTime.ts +0 -1
- package/src/query/queryRelativeGrowthAdvantage.ts +3 -3
- package/src/utils/Map2d.ts +75 -0
- package/src/utils/map2d.spec.ts +94 -0
- package/src/utils/mutations.ts +5 -1
- package/src/utils/temporal.ts +64 -5
- package/src/web-components/input/index.ts +1 -0
- package/src/web-components/visualization/gs-mutations-over-time.stories.ts +225 -0
- package/src/web-components/visualization/gs-mutations-over-time.tsx +107 -0
- package/src/web-components/visualization/index.ts +1 -0
|
@@ -0,0 +1,1864 @@
|
|
|
1
|
+
{
|
|
2
|
+
"data": [
|
|
3
|
+
{
|
|
4
|
+
"mutation": "C21T",
|
|
5
|
+
"count": 120,
|
|
6
|
+
"proportion": 0.7741935483870968,
|
|
7
|
+
"sequenceName": null,
|
|
8
|
+
"mutationFrom": "C",
|
|
9
|
+
"mutationTo": "T",
|
|
10
|
+
"position": 21
|
|
11
|
+
},
|
|
12
|
+
{
|
|
13
|
+
"mutation": "C44T",
|
|
14
|
+
"count": 292,
|
|
15
|
+
"proportion": 0.5367647058823529,
|
|
16
|
+
"sequenceName": null,
|
|
17
|
+
"mutationFrom": "C",
|
|
18
|
+
"mutationTo": "T",
|
|
19
|
+
"position": 44
|
|
20
|
+
},
|
|
21
|
+
{
|
|
22
|
+
"mutation": "C241T",
|
|
23
|
+
"count": 2820,
|
|
24
|
+
"proportion": 0.9985835694050992,
|
|
25
|
+
"sequenceName": null,
|
|
26
|
+
"mutationFrom": "C",
|
|
27
|
+
"mutationTo": "T",
|
|
28
|
+
"position": 241
|
|
29
|
+
},
|
|
30
|
+
{
|
|
31
|
+
"mutation": "G515-",
|
|
32
|
+
"count": 157,
|
|
33
|
+
"proportion": 0.0599923576614444,
|
|
34
|
+
"sequenceName": null,
|
|
35
|
+
"mutationFrom": "G",
|
|
36
|
+
"mutationTo": "-",
|
|
37
|
+
"position": 515
|
|
38
|
+
},
|
|
39
|
+
{
|
|
40
|
+
"mutation": "T516-",
|
|
41
|
+
"count": 169,
|
|
42
|
+
"proportion": 0.06460244648318043,
|
|
43
|
+
"sequenceName": null,
|
|
44
|
+
"mutationFrom": "T",
|
|
45
|
+
"mutationTo": "-",
|
|
46
|
+
"position": 516
|
|
47
|
+
},
|
|
48
|
+
{
|
|
49
|
+
"mutation": "T517-",
|
|
50
|
+
"count": 169,
|
|
51
|
+
"proportion": 0.06462715105162524,
|
|
52
|
+
"sequenceName": null,
|
|
53
|
+
"mutationFrom": "T",
|
|
54
|
+
"mutationTo": "-",
|
|
55
|
+
"position": 517
|
|
56
|
+
},
|
|
57
|
+
{
|
|
58
|
+
"mutation": "A518-",
|
|
59
|
+
"count": 183,
|
|
60
|
+
"proportion": 0.07003444316877153,
|
|
61
|
+
"sequenceName": null,
|
|
62
|
+
"mutationFrom": "A",
|
|
63
|
+
"mutationTo": "-",
|
|
64
|
+
"position": 518
|
|
65
|
+
},
|
|
66
|
+
{
|
|
67
|
+
"mutation": "T670G",
|
|
68
|
+
"count": 2932,
|
|
69
|
+
"proportion": 0.9892037786774629,
|
|
70
|
+
"sequenceName": null,
|
|
71
|
+
"mutationFrom": "T",
|
|
72
|
+
"mutationTo": "G",
|
|
73
|
+
"position": 670
|
|
74
|
+
},
|
|
75
|
+
{
|
|
76
|
+
"mutation": "C774T",
|
|
77
|
+
"count": 558,
|
|
78
|
+
"proportion": 0.189280868385346,
|
|
79
|
+
"sequenceName": null,
|
|
80
|
+
"mutationFrom": "C",
|
|
81
|
+
"mutationTo": "T",
|
|
82
|
+
"position": 774
|
|
83
|
+
},
|
|
84
|
+
{
|
|
85
|
+
"mutation": "C897A",
|
|
86
|
+
"count": 2916,
|
|
87
|
+
"proportion": 0.9818181818181818,
|
|
88
|
+
"sequenceName": null,
|
|
89
|
+
"mutationFrom": "C",
|
|
90
|
+
"mutationTo": "A",
|
|
91
|
+
"position": 897
|
|
92
|
+
},
|
|
93
|
+
{
|
|
94
|
+
"mutation": "C2790T",
|
|
95
|
+
"count": 2901,
|
|
96
|
+
"proportion": 0.9993110575266965,
|
|
97
|
+
"sequenceName": null,
|
|
98
|
+
"mutationFrom": "C",
|
|
99
|
+
"mutationTo": "T",
|
|
100
|
+
"position": 2790
|
|
101
|
+
},
|
|
102
|
+
{
|
|
103
|
+
"mutation": "C3037T",
|
|
104
|
+
"count": 3029,
|
|
105
|
+
"proportion": 1.0,
|
|
106
|
+
"sequenceName": null,
|
|
107
|
+
"mutationFrom": "C",
|
|
108
|
+
"mutationTo": "T",
|
|
109
|
+
"position": 3037
|
|
110
|
+
},
|
|
111
|
+
{
|
|
112
|
+
"mutation": "G3431T",
|
|
113
|
+
"count": 2828,
|
|
114
|
+
"proportion": 0.9915848527349228,
|
|
115
|
+
"sequenceName": null,
|
|
116
|
+
"mutationFrom": "G",
|
|
117
|
+
"mutationTo": "T",
|
|
118
|
+
"position": 3431
|
|
119
|
+
},
|
|
120
|
+
{
|
|
121
|
+
"mutation": "T3565C",
|
|
122
|
+
"count": 2967,
|
|
123
|
+
"proportion": 0.9886704431856048,
|
|
124
|
+
"sequenceName": null,
|
|
125
|
+
"mutationFrom": "T",
|
|
126
|
+
"mutationTo": "C",
|
|
127
|
+
"position": 3565
|
|
128
|
+
},
|
|
129
|
+
{
|
|
130
|
+
"mutation": "G4184A",
|
|
131
|
+
"count": 3035,
|
|
132
|
+
"proportion": 1.0,
|
|
133
|
+
"sequenceName": null,
|
|
134
|
+
"mutationFrom": "G",
|
|
135
|
+
"mutationTo": "A",
|
|
136
|
+
"position": 4184
|
|
137
|
+
},
|
|
138
|
+
{
|
|
139
|
+
"mutation": "C4321T",
|
|
140
|
+
"count": 2960,
|
|
141
|
+
"proportion": 0.9830621056127532,
|
|
142
|
+
"sequenceName": null,
|
|
143
|
+
"mutationFrom": "C",
|
|
144
|
+
"mutationTo": "T",
|
|
145
|
+
"position": 4321
|
|
146
|
+
},
|
|
147
|
+
{
|
|
148
|
+
"mutation": "A6183G",
|
|
149
|
+
"count": 2974,
|
|
150
|
+
"proportion": 0.9890256069171932,
|
|
151
|
+
"sequenceName": null,
|
|
152
|
+
"mutationFrom": "A",
|
|
153
|
+
"mutationTo": "G",
|
|
154
|
+
"position": 6183
|
|
155
|
+
},
|
|
156
|
+
{
|
|
157
|
+
"mutation": "C7113T",
|
|
158
|
+
"count": 602,
|
|
159
|
+
"proportion": 0.2,
|
|
160
|
+
"sequenceName": null,
|
|
161
|
+
"mutationFrom": "C",
|
|
162
|
+
"mutationTo": "T",
|
|
163
|
+
"position": 7113
|
|
164
|
+
},
|
|
165
|
+
{
|
|
166
|
+
"mutation": "A7842G",
|
|
167
|
+
"count": 3013,
|
|
168
|
+
"proportion": 0.9920974646032269,
|
|
169
|
+
"sequenceName": null,
|
|
170
|
+
"mutationFrom": "A",
|
|
171
|
+
"mutationTo": "G",
|
|
172
|
+
"position": 7842
|
|
173
|
+
},
|
|
174
|
+
{
|
|
175
|
+
"mutation": "C8293T",
|
|
176
|
+
"count": 3007,
|
|
177
|
+
"proportion": 0.9907742998352553,
|
|
178
|
+
"sequenceName": null,
|
|
179
|
+
"mutationFrom": "C",
|
|
180
|
+
"mutationTo": "T",
|
|
181
|
+
"position": 8293
|
|
182
|
+
},
|
|
183
|
+
{
|
|
184
|
+
"mutation": "G8393A",
|
|
185
|
+
"count": 3011,
|
|
186
|
+
"proportion": 0.9920922570016475,
|
|
187
|
+
"sequenceName": null,
|
|
188
|
+
"mutationFrom": "G",
|
|
189
|
+
"mutationTo": "A",
|
|
190
|
+
"position": 8393
|
|
191
|
+
},
|
|
192
|
+
{
|
|
193
|
+
"mutation": "C9344T",
|
|
194
|
+
"count": 3037,
|
|
195
|
+
"proportion": 0.999670836076366,
|
|
196
|
+
"sequenceName": null,
|
|
197
|
+
"mutationFrom": "C",
|
|
198
|
+
"mutationTo": "T",
|
|
199
|
+
"position": 9344
|
|
200
|
+
},
|
|
201
|
+
{
|
|
202
|
+
"mutation": "A9424G",
|
|
203
|
+
"count": 2983,
|
|
204
|
+
"proportion": 0.9996648793565683,
|
|
205
|
+
"sequenceName": null,
|
|
206
|
+
"mutationFrom": "A",
|
|
207
|
+
"mutationTo": "G",
|
|
208
|
+
"position": 9424
|
|
209
|
+
},
|
|
210
|
+
{
|
|
211
|
+
"mutation": "C9534T",
|
|
212
|
+
"count": 3007,
|
|
213
|
+
"proportion": 1.0,
|
|
214
|
+
"sequenceName": null,
|
|
215
|
+
"mutationFrom": "C",
|
|
216
|
+
"mutationTo": "T",
|
|
217
|
+
"position": 9534
|
|
218
|
+
},
|
|
219
|
+
{
|
|
220
|
+
"mutation": "C10029T",
|
|
221
|
+
"count": 2990,
|
|
222
|
+
"proportion": 0.9993315508021391,
|
|
223
|
+
"sequenceName": null,
|
|
224
|
+
"mutationFrom": "C",
|
|
225
|
+
"mutationTo": "T",
|
|
226
|
+
"position": 10029
|
|
227
|
+
},
|
|
228
|
+
{
|
|
229
|
+
"mutation": "C10198T",
|
|
230
|
+
"count": 2964,
|
|
231
|
+
"proportion": 1.0,
|
|
232
|
+
"sequenceName": null,
|
|
233
|
+
"mutationFrom": "C",
|
|
234
|
+
"mutationTo": "T",
|
|
235
|
+
"position": 10198
|
|
236
|
+
},
|
|
237
|
+
{
|
|
238
|
+
"mutation": "G10447A",
|
|
239
|
+
"count": 3038,
|
|
240
|
+
"proportion": 1.0,
|
|
241
|
+
"sequenceName": null,
|
|
242
|
+
"mutationFrom": "G",
|
|
243
|
+
"mutationTo": "A",
|
|
244
|
+
"position": 10447
|
|
245
|
+
},
|
|
246
|
+
{
|
|
247
|
+
"mutation": "C10449A",
|
|
248
|
+
"count": 3038,
|
|
249
|
+
"proportion": 1.0,
|
|
250
|
+
"sequenceName": null,
|
|
251
|
+
"mutationFrom": "C",
|
|
252
|
+
"mutationTo": "A",
|
|
253
|
+
"position": 10449
|
|
254
|
+
},
|
|
255
|
+
{
|
|
256
|
+
"mutation": "G11042T",
|
|
257
|
+
"count": 3017,
|
|
258
|
+
"proportion": 0.9921078592568234,
|
|
259
|
+
"sequenceName": null,
|
|
260
|
+
"mutationFrom": "G",
|
|
261
|
+
"mutationTo": "T",
|
|
262
|
+
"position": 11042
|
|
263
|
+
},
|
|
264
|
+
{
|
|
265
|
+
"mutation": "T11288-",
|
|
266
|
+
"count": 3027,
|
|
267
|
+
"proportion": 0.9967072769180112,
|
|
268
|
+
"sequenceName": null,
|
|
269
|
+
"mutationFrom": "T",
|
|
270
|
+
"mutationTo": "-",
|
|
271
|
+
"position": 11288
|
|
272
|
+
},
|
|
273
|
+
{
|
|
274
|
+
"mutation": "C11289-",
|
|
275
|
+
"count": 3027,
|
|
276
|
+
"proportion": 0.9967072769180112,
|
|
277
|
+
"sequenceName": null,
|
|
278
|
+
"mutationFrom": "C",
|
|
279
|
+
"mutationTo": "-",
|
|
280
|
+
"position": 11289
|
|
281
|
+
},
|
|
282
|
+
{
|
|
283
|
+
"mutation": "T11290-",
|
|
284
|
+
"count": 3027,
|
|
285
|
+
"proportion": 0.9967072769180112,
|
|
286
|
+
"sequenceName": null,
|
|
287
|
+
"mutationFrom": "T",
|
|
288
|
+
"mutationTo": "-",
|
|
289
|
+
"position": 11290
|
|
290
|
+
},
|
|
291
|
+
{
|
|
292
|
+
"mutation": "G11291-",
|
|
293
|
+
"count": 3026,
|
|
294
|
+
"proportion": 0.9963780046098123,
|
|
295
|
+
"sequenceName": null,
|
|
296
|
+
"mutationFrom": "G",
|
|
297
|
+
"mutationTo": "-",
|
|
298
|
+
"position": 11291
|
|
299
|
+
},
|
|
300
|
+
{
|
|
301
|
+
"mutation": "G11292-",
|
|
302
|
+
"count": 3026,
|
|
303
|
+
"proportion": 0.9963780046098123,
|
|
304
|
+
"sequenceName": null,
|
|
305
|
+
"mutationFrom": "G",
|
|
306
|
+
"mutationTo": "-",
|
|
307
|
+
"position": 11292
|
|
308
|
+
},
|
|
309
|
+
{
|
|
310
|
+
"mutation": "T11293-",
|
|
311
|
+
"count": 3026,
|
|
312
|
+
"proportion": 0.9963780046098123,
|
|
313
|
+
"sequenceName": null,
|
|
314
|
+
"mutationFrom": "T",
|
|
315
|
+
"mutationTo": "-",
|
|
316
|
+
"position": 11293
|
|
317
|
+
},
|
|
318
|
+
{
|
|
319
|
+
"mutation": "T11294-",
|
|
320
|
+
"count": 3024,
|
|
321
|
+
"proportion": 0.9957194599934146,
|
|
322
|
+
"sequenceName": null,
|
|
323
|
+
"mutationFrom": "T",
|
|
324
|
+
"mutationTo": "-",
|
|
325
|
+
"position": 11294
|
|
326
|
+
},
|
|
327
|
+
{
|
|
328
|
+
"mutation": "T11295-",
|
|
329
|
+
"count": 3023,
|
|
330
|
+
"proportion": 0.9953901876852157,
|
|
331
|
+
"sequenceName": null,
|
|
332
|
+
"mutationFrom": "T",
|
|
333
|
+
"mutationTo": "-",
|
|
334
|
+
"position": 11295
|
|
335
|
+
},
|
|
336
|
+
{
|
|
337
|
+
"mutation": "T11296-",
|
|
338
|
+
"count": 3023,
|
|
339
|
+
"proportion": 0.9953901876852157,
|
|
340
|
+
"sequenceName": null,
|
|
341
|
+
"mutationFrom": "T",
|
|
342
|
+
"mutationTo": "-",
|
|
343
|
+
"position": 11296
|
|
344
|
+
},
|
|
345
|
+
{
|
|
346
|
+
"mutation": "G11727A",
|
|
347
|
+
"count": 2902,
|
|
348
|
+
"proportion": 0.9924760601915185,
|
|
349
|
+
"sequenceName": null,
|
|
350
|
+
"mutationFrom": "G",
|
|
351
|
+
"mutationTo": "A",
|
|
352
|
+
"position": 11727
|
|
353
|
+
},
|
|
354
|
+
{
|
|
355
|
+
"mutation": "C12789T",
|
|
356
|
+
"count": 3015,
|
|
357
|
+
"proportion": 0.9917763157894737,
|
|
358
|
+
"sequenceName": null,
|
|
359
|
+
"mutationFrom": "C",
|
|
360
|
+
"mutationTo": "T",
|
|
361
|
+
"position": 12789
|
|
362
|
+
},
|
|
363
|
+
{
|
|
364
|
+
"mutation": "C12815T",
|
|
365
|
+
"count": 3015,
|
|
366
|
+
"proportion": 0.9921026653504442,
|
|
367
|
+
"sequenceName": null,
|
|
368
|
+
"mutationFrom": "C",
|
|
369
|
+
"mutationTo": "T",
|
|
370
|
+
"position": 12815
|
|
371
|
+
},
|
|
372
|
+
{
|
|
373
|
+
"mutation": "C12880T",
|
|
374
|
+
"count": 3034,
|
|
375
|
+
"proportion": 1.0,
|
|
376
|
+
"sequenceName": null,
|
|
377
|
+
"mutationFrom": "C",
|
|
378
|
+
"mutationTo": "T",
|
|
379
|
+
"position": 12880
|
|
380
|
+
},
|
|
381
|
+
{
|
|
382
|
+
"mutation": "A12928G",
|
|
383
|
+
"count": 179,
|
|
384
|
+
"proportion": 0.059114927344782034,
|
|
385
|
+
"sequenceName": null,
|
|
386
|
+
"mutationFrom": "A",
|
|
387
|
+
"mutationTo": "G",
|
|
388
|
+
"position": 12928
|
|
389
|
+
},
|
|
390
|
+
{
|
|
391
|
+
"mutation": "T13339C",
|
|
392
|
+
"count": 2928,
|
|
393
|
+
"proportion": 0.9888551165146909,
|
|
394
|
+
"sequenceName": null,
|
|
395
|
+
"mutationFrom": "T",
|
|
396
|
+
"mutationTo": "C",
|
|
397
|
+
"position": 13339
|
|
398
|
+
},
|
|
399
|
+
{
|
|
400
|
+
"mutation": "C14408T",
|
|
401
|
+
"count": 3042,
|
|
402
|
+
"proportion": 1.0,
|
|
403
|
+
"sequenceName": null,
|
|
404
|
+
"mutationFrom": "C",
|
|
405
|
+
"mutationTo": "T",
|
|
406
|
+
"position": 14408
|
|
407
|
+
},
|
|
408
|
+
{
|
|
409
|
+
"mutation": "C15714T",
|
|
410
|
+
"count": 3037,
|
|
411
|
+
"proportion": 1.0,
|
|
412
|
+
"sequenceName": null,
|
|
413
|
+
"mutationFrom": "C",
|
|
414
|
+
"mutationTo": "T",
|
|
415
|
+
"position": 15714
|
|
416
|
+
},
|
|
417
|
+
{
|
|
418
|
+
"mutation": "T15756A",
|
|
419
|
+
"count": 3008,
|
|
420
|
+
"proportion": 0.9920844327176781,
|
|
421
|
+
"sequenceName": null,
|
|
422
|
+
"mutationFrom": "T",
|
|
423
|
+
"mutationTo": "A",
|
|
424
|
+
"position": 15756
|
|
425
|
+
},
|
|
426
|
+
{
|
|
427
|
+
"mutation": "G17334T",
|
|
428
|
+
"count": 559,
|
|
429
|
+
"proportion": 0.18522200132538105,
|
|
430
|
+
"sequenceName": null,
|
|
431
|
+
"mutationFrom": "G",
|
|
432
|
+
"mutationTo": "T",
|
|
433
|
+
"position": 17334
|
|
434
|
+
},
|
|
435
|
+
{
|
|
436
|
+
"mutation": "C17410T",
|
|
437
|
+
"count": 3030,
|
|
438
|
+
"proportion": 1.0,
|
|
439
|
+
"sequenceName": null,
|
|
440
|
+
"mutationFrom": "C",
|
|
441
|
+
"mutationTo": "T",
|
|
442
|
+
"position": 17410
|
|
443
|
+
},
|
|
444
|
+
{
|
|
445
|
+
"mutation": "A18163G",
|
|
446
|
+
"count": 3027,
|
|
447
|
+
"proportion": 1.0,
|
|
448
|
+
"sequenceName": null,
|
|
449
|
+
"mutationFrom": "A",
|
|
450
|
+
"mutationTo": "G",
|
|
451
|
+
"position": 18163
|
|
452
|
+
},
|
|
453
|
+
{
|
|
454
|
+
"mutation": "T18453C",
|
|
455
|
+
"count": 368,
|
|
456
|
+
"proportion": 0.12189466710831401,
|
|
457
|
+
"sequenceName": null,
|
|
458
|
+
"mutationFrom": "T",
|
|
459
|
+
"mutationTo": "C",
|
|
460
|
+
"position": 18453
|
|
461
|
+
},
|
|
462
|
+
{
|
|
463
|
+
"mutation": "A18492G",
|
|
464
|
+
"count": 3017,
|
|
465
|
+
"proportion": 0.9924342105263158,
|
|
466
|
+
"sequenceName": null,
|
|
467
|
+
"mutationFrom": "A",
|
|
468
|
+
"mutationTo": "G",
|
|
469
|
+
"position": 18492
|
|
470
|
+
},
|
|
471
|
+
{
|
|
472
|
+
"mutation": "C18894T",
|
|
473
|
+
"count": 2971,
|
|
474
|
+
"proportion": 0.99298128342246,
|
|
475
|
+
"sequenceName": null,
|
|
476
|
+
"mutationFrom": "C",
|
|
477
|
+
"mutationTo": "T",
|
|
478
|
+
"position": 18894
|
|
479
|
+
},
|
|
480
|
+
{
|
|
481
|
+
"mutation": "C19955T",
|
|
482
|
+
"count": 2971,
|
|
483
|
+
"proportion": 0.9996635262449529,
|
|
484
|
+
"sequenceName": null,
|
|
485
|
+
"mutationFrom": "C",
|
|
486
|
+
"mutationTo": "T",
|
|
487
|
+
"position": 19955
|
|
488
|
+
},
|
|
489
|
+
{
|
|
490
|
+
"mutation": "A20055G",
|
|
491
|
+
"count": 2972,
|
|
492
|
+
"proportion": 0.9966465459423206,
|
|
493
|
+
"sequenceName": null,
|
|
494
|
+
"mutationFrom": "A",
|
|
495
|
+
"mutationTo": "G",
|
|
496
|
+
"position": 20055
|
|
497
|
+
},
|
|
498
|
+
{
|
|
499
|
+
"mutation": "C21618T",
|
|
500
|
+
"count": 2906,
|
|
501
|
+
"proportion": 0.998282377189969,
|
|
502
|
+
"sequenceName": null,
|
|
503
|
+
"mutationFrom": "C",
|
|
504
|
+
"mutationTo": "T",
|
|
505
|
+
"position": 21618
|
|
506
|
+
},
|
|
507
|
+
{
|
|
508
|
+
"mutation": "C21622T",
|
|
509
|
+
"count": 2903,
|
|
510
|
+
"proportion": 0.9979374355448608,
|
|
511
|
+
"sequenceName": null,
|
|
512
|
+
"mutationFrom": "C",
|
|
513
|
+
"mutationTo": "T",
|
|
514
|
+
"position": 21622
|
|
515
|
+
},
|
|
516
|
+
{
|
|
517
|
+
"mutation": "G21624C",
|
|
518
|
+
"count": 2905,
|
|
519
|
+
"proportion": 0.9979388526279629,
|
|
520
|
+
"sequenceName": null,
|
|
521
|
+
"mutationFrom": "G",
|
|
522
|
+
"mutationTo": "C",
|
|
523
|
+
"position": 21624
|
|
524
|
+
},
|
|
525
|
+
{
|
|
526
|
+
"mutation": "T21633-",
|
|
527
|
+
"count": 2838,
|
|
528
|
+
"proportion": 0.9854166666666667,
|
|
529
|
+
"sequenceName": null,
|
|
530
|
+
"mutationFrom": "T",
|
|
531
|
+
"mutationTo": "-",
|
|
532
|
+
"position": 21633
|
|
533
|
+
},
|
|
534
|
+
{
|
|
535
|
+
"mutation": "A21634-",
|
|
536
|
+
"count": 2838,
|
|
537
|
+
"proportion": 0.9968387776606955,
|
|
538
|
+
"sequenceName": null,
|
|
539
|
+
"mutationFrom": "A",
|
|
540
|
+
"mutationTo": "-",
|
|
541
|
+
"position": 21634
|
|
542
|
+
},
|
|
543
|
+
{
|
|
544
|
+
"mutation": "C21635-",
|
|
545
|
+
"count": 2847,
|
|
546
|
+
"proportion": 1.0,
|
|
547
|
+
"sequenceName": null,
|
|
548
|
+
"mutationFrom": "C",
|
|
549
|
+
"mutationTo": "-",
|
|
550
|
+
"position": 21635
|
|
551
|
+
},
|
|
552
|
+
{
|
|
553
|
+
"mutation": "C21636-",
|
|
554
|
+
"count": 2847,
|
|
555
|
+
"proportion": 1.0,
|
|
556
|
+
"sequenceName": null,
|
|
557
|
+
"mutationFrom": "C",
|
|
558
|
+
"mutationTo": "-",
|
|
559
|
+
"position": 21636
|
|
560
|
+
},
|
|
561
|
+
{
|
|
562
|
+
"mutation": "C21637-",
|
|
563
|
+
"count": 2847,
|
|
564
|
+
"proportion": 1.0,
|
|
565
|
+
"sequenceName": null,
|
|
566
|
+
"mutationFrom": "C",
|
|
567
|
+
"mutationTo": "-",
|
|
568
|
+
"position": 21637
|
|
569
|
+
},
|
|
570
|
+
{
|
|
571
|
+
"mutation": "C21638-",
|
|
572
|
+
"count": 2846,
|
|
573
|
+
"proportion": 0.9992977528089888,
|
|
574
|
+
"sequenceName": null,
|
|
575
|
+
"mutationFrom": "C",
|
|
576
|
+
"mutationTo": "-",
|
|
577
|
+
"position": 21638
|
|
578
|
+
},
|
|
579
|
+
{
|
|
580
|
+
"mutation": "C21639-",
|
|
581
|
+
"count": 2846,
|
|
582
|
+
"proportion": 0.9989469989469989,
|
|
583
|
+
"sequenceName": null,
|
|
584
|
+
"mutationFrom": "C",
|
|
585
|
+
"mutationTo": "-",
|
|
586
|
+
"position": 21639
|
|
587
|
+
},
|
|
588
|
+
{
|
|
589
|
+
"mutation": "T21640-",
|
|
590
|
+
"count": 2846,
|
|
591
|
+
"proportion": 0.9944095038434662,
|
|
592
|
+
"sequenceName": null,
|
|
593
|
+
"mutationFrom": "T",
|
|
594
|
+
"mutationTo": "-",
|
|
595
|
+
"position": 21640
|
|
596
|
+
},
|
|
597
|
+
{
|
|
598
|
+
"mutation": "G21641-",
|
|
599
|
+
"count": 2846,
|
|
600
|
+
"proportion": 0.9888811674774148,
|
|
601
|
+
"sequenceName": null,
|
|
602
|
+
"mutationFrom": "G",
|
|
603
|
+
"mutationTo": "-",
|
|
604
|
+
"position": 21641
|
|
605
|
+
},
|
|
606
|
+
{
|
|
607
|
+
"mutation": "C21711T",
|
|
608
|
+
"count": 2930,
|
|
609
|
+
"proportion": 0.9996588195155237,
|
|
610
|
+
"sequenceName": null,
|
|
611
|
+
"mutationFrom": "C",
|
|
612
|
+
"mutationTo": "T",
|
|
613
|
+
"position": 21711
|
|
614
|
+
},
|
|
615
|
+
{
|
|
616
|
+
"mutation": "T21738C",
|
|
617
|
+
"count": 232,
|
|
618
|
+
"proportion": 0.07856417202844565,
|
|
619
|
+
"sequenceName": null,
|
|
620
|
+
"mutationFrom": "T",
|
|
621
|
+
"mutationTo": "C",
|
|
622
|
+
"position": 21738
|
|
623
|
+
},
|
|
624
|
+
{
|
|
625
|
+
"mutation": "T21765-",
|
|
626
|
+
"count": 2926,
|
|
627
|
+
"proportion": 0.9911924119241192,
|
|
628
|
+
"sequenceName": null,
|
|
629
|
+
"mutationFrom": "T",
|
|
630
|
+
"mutationTo": "-",
|
|
631
|
+
"position": 21765
|
|
632
|
+
},
|
|
633
|
+
{
|
|
634
|
+
"mutation": "A21766-",
|
|
635
|
+
"count": 2926,
|
|
636
|
+
"proportion": 0.9986348122866894,
|
|
637
|
+
"sequenceName": null,
|
|
638
|
+
"mutationFrom": "A",
|
|
639
|
+
"mutationTo": "-",
|
|
640
|
+
"position": 21766
|
|
641
|
+
},
|
|
642
|
+
{
|
|
643
|
+
"mutation": "C21767-",
|
|
644
|
+
"count": 2930,
|
|
645
|
+
"proportion": 1.0,
|
|
646
|
+
"sequenceName": null,
|
|
647
|
+
"mutationFrom": "C",
|
|
648
|
+
"mutationTo": "-",
|
|
649
|
+
"position": 21767
|
|
650
|
+
},
|
|
651
|
+
{
|
|
652
|
+
"mutation": "A21768-",
|
|
653
|
+
"count": 2930,
|
|
654
|
+
"proportion": 1.0,
|
|
655
|
+
"sequenceName": null,
|
|
656
|
+
"mutationFrom": "A",
|
|
657
|
+
"mutationTo": "-",
|
|
658
|
+
"position": 21768
|
|
659
|
+
},
|
|
660
|
+
{
|
|
661
|
+
"mutation": "T21769-",
|
|
662
|
+
"count": 2930,
|
|
663
|
+
"proportion": 0.9955827387020048,
|
|
664
|
+
"sequenceName": null,
|
|
665
|
+
"mutationFrom": "T",
|
|
666
|
+
"mutationTo": "-",
|
|
667
|
+
"position": 21769
|
|
668
|
+
},
|
|
669
|
+
{
|
|
670
|
+
"mutation": "G21770-",
|
|
671
|
+
"count": 2927,
|
|
672
|
+
"proportion": 0.995578231292517,
|
|
673
|
+
"sequenceName": null,
|
|
674
|
+
"mutationFrom": "G",
|
|
675
|
+
"mutationTo": "-",
|
|
676
|
+
"position": 21770
|
|
677
|
+
},
|
|
678
|
+
{
|
|
679
|
+
"mutation": "G21941T",
|
|
680
|
+
"count": 3023,
|
|
681
|
+
"proportion": 0.9990085922009253,
|
|
682
|
+
"sequenceName": null,
|
|
683
|
+
"mutationFrom": "G",
|
|
684
|
+
"mutationTo": "T",
|
|
685
|
+
"position": 21941
|
|
686
|
+
},
|
|
687
|
+
{
|
|
688
|
+
"mutation": "G21987A",
|
|
689
|
+
"count": 3004,
|
|
690
|
+
"proportion": 0.9990023279015631,
|
|
691
|
+
"sequenceName": null,
|
|
692
|
+
"mutationFrom": "G",
|
|
693
|
+
"mutationTo": "A",
|
|
694
|
+
"position": 21987
|
|
695
|
+
},
|
|
696
|
+
{
|
|
697
|
+
"mutation": "T21992-",
|
|
698
|
+
"count": 3014,
|
|
699
|
+
"proportion": 0.9960343688037012,
|
|
700
|
+
"sequenceName": null,
|
|
701
|
+
"mutationFrom": "T",
|
|
702
|
+
"mutationTo": "-",
|
|
703
|
+
"position": 21992
|
|
704
|
+
},
|
|
705
|
+
{
|
|
706
|
+
"mutation": "A21993-",
|
|
707
|
+
"count": 3014,
|
|
708
|
+
"proportion": 0.9973527465254798,
|
|
709
|
+
"sequenceName": null,
|
|
710
|
+
"mutationFrom": "A",
|
|
711
|
+
"mutationTo": "-",
|
|
712
|
+
"position": 21993
|
|
713
|
+
},
|
|
714
|
+
{
|
|
715
|
+
"mutation": "T21994-",
|
|
716
|
+
"count": 3014,
|
|
717
|
+
"proportion": 0.9960343688037012,
|
|
718
|
+
"sequenceName": null,
|
|
719
|
+
"mutationFrom": "T",
|
|
720
|
+
"mutationTo": "-",
|
|
721
|
+
"position": 21994
|
|
722
|
+
},
|
|
723
|
+
{
|
|
724
|
+
"mutation": "T22032C",
|
|
725
|
+
"count": 3014,
|
|
726
|
+
"proportion": 0.9993368700265252,
|
|
727
|
+
"sequenceName": null,
|
|
728
|
+
"mutationFrom": "T",
|
|
729
|
+
"mutationTo": "C",
|
|
730
|
+
"position": 22032
|
|
731
|
+
},
|
|
732
|
+
{
|
|
733
|
+
"mutation": "C22033A",
|
|
734
|
+
"count": 3016,
|
|
735
|
+
"proportion": 1.0,
|
|
736
|
+
"sequenceName": null,
|
|
737
|
+
"mutationFrom": "C",
|
|
738
|
+
"mutationTo": "A",
|
|
739
|
+
"position": 22033
|
|
740
|
+
},
|
|
741
|
+
{
|
|
742
|
+
"mutation": "A22034G",
|
|
743
|
+
"count": 3017,
|
|
744
|
+
"proportion": 1.0,
|
|
745
|
+
"sequenceName": null,
|
|
746
|
+
"mutationFrom": "A",
|
|
747
|
+
"mutationTo": "G",
|
|
748
|
+
"position": 22034
|
|
749
|
+
},
|
|
750
|
+
{
|
|
751
|
+
"mutation": "A22194-",
|
|
752
|
+
"count": 2994,
|
|
753
|
+
"proportion": 0.9986657771847899,
|
|
754
|
+
"sequenceName": null,
|
|
755
|
+
"mutationFrom": "A",
|
|
756
|
+
"mutationTo": "-",
|
|
757
|
+
"position": 22194
|
|
758
|
+
},
|
|
759
|
+
{
|
|
760
|
+
"mutation": "T22195-",
|
|
761
|
+
"count": 2994,
|
|
762
|
+
"proportion": 0.9986657771847899,
|
|
763
|
+
"sequenceName": null,
|
|
764
|
+
"mutationFrom": "T",
|
|
765
|
+
"mutationTo": "-",
|
|
766
|
+
"position": 22195
|
|
767
|
+
},
|
|
768
|
+
{
|
|
769
|
+
"mutation": "T22196-",
|
|
770
|
+
"count": 2994,
|
|
771
|
+
"proportion": 0.9986657771847899,
|
|
772
|
+
"sequenceName": null,
|
|
773
|
+
"mutationFrom": "T",
|
|
774
|
+
"mutationTo": "-",
|
|
775
|
+
"position": 22196
|
|
776
|
+
},
|
|
777
|
+
{
|
|
778
|
+
"mutation": "T22200G",
|
|
779
|
+
"count": 2994,
|
|
780
|
+
"proportion": 0.9986657771847899,
|
|
781
|
+
"sequenceName": null,
|
|
782
|
+
"mutationFrom": "T",
|
|
783
|
+
"mutationTo": "G",
|
|
784
|
+
"position": 22200
|
|
785
|
+
},
|
|
786
|
+
{
|
|
787
|
+
"mutation": "C22208T",
|
|
788
|
+
"count": 3001,
|
|
789
|
+
"proportion": 1.0,
|
|
790
|
+
"sequenceName": null,
|
|
791
|
+
"mutationFrom": "C",
|
|
792
|
+
"mutationTo": "T",
|
|
793
|
+
"position": 22208
|
|
794
|
+
},
|
|
795
|
+
{
|
|
796
|
+
"mutation": "C22295A",
|
|
797
|
+
"count": 2955,
|
|
798
|
+
"proportion": 1.0,
|
|
799
|
+
"sequenceName": null,
|
|
800
|
+
"mutationFrom": "C",
|
|
801
|
+
"mutationTo": "A",
|
|
802
|
+
"position": 22295
|
|
803
|
+
},
|
|
804
|
+
{
|
|
805
|
+
"mutation": "C22353A",
|
|
806
|
+
"count": 2947,
|
|
807
|
+
"proportion": 0.9859484777517564,
|
|
808
|
+
"sequenceName": null,
|
|
809
|
+
"mutationFrom": "C",
|
|
810
|
+
"mutationTo": "A",
|
|
811
|
+
"position": 22353
|
|
812
|
+
},
|
|
813
|
+
{
|
|
814
|
+
"mutation": "A22556G",
|
|
815
|
+
"count": 2991,
|
|
816
|
+
"proportion": 0.9986644407345576,
|
|
817
|
+
"sequenceName": null,
|
|
818
|
+
"mutationFrom": "A",
|
|
819
|
+
"mutationTo": "G",
|
|
820
|
+
"position": 22556
|
|
821
|
+
},
|
|
822
|
+
{
|
|
823
|
+
"mutation": "G22577C",
|
|
824
|
+
"count": 2984,
|
|
825
|
+
"proportion": 0.9996649916247906,
|
|
826
|
+
"sequenceName": null,
|
|
827
|
+
"mutationFrom": "G",
|
|
828
|
+
"mutationTo": "C",
|
|
829
|
+
"position": 22577
|
|
830
|
+
},
|
|
831
|
+
{
|
|
832
|
+
"mutation": "G22578A",
|
|
833
|
+
"count": 2985,
|
|
834
|
+
"proportion": 1.0,
|
|
835
|
+
"sequenceName": null,
|
|
836
|
+
"mutationFrom": "G",
|
|
837
|
+
"mutationTo": "A",
|
|
838
|
+
"position": 22578
|
|
839
|
+
},
|
|
840
|
+
{
|
|
841
|
+
"mutation": "G22599C",
|
|
842
|
+
"count": 1064,
|
|
843
|
+
"proportion": 0.35764705882352943,
|
|
844
|
+
"sequenceName": null,
|
|
845
|
+
"mutationFrom": "G",
|
|
846
|
+
"mutationTo": "C",
|
|
847
|
+
"position": 22599
|
|
848
|
+
},
|
|
849
|
+
{
|
|
850
|
+
"mutation": "A22629C",
|
|
851
|
+
"count": 2900,
|
|
852
|
+
"proportion": 0.9993108201240524,
|
|
853
|
+
"sequenceName": null,
|
|
854
|
+
"mutationFrom": "A",
|
|
855
|
+
"mutationTo": "C",
|
|
856
|
+
"position": 22629
|
|
857
|
+
},
|
|
858
|
+
{
|
|
859
|
+
"mutation": "C22674T",
|
|
860
|
+
"count": 2995,
|
|
861
|
+
"proportion": 0.9996662216288384,
|
|
862
|
+
"sequenceName": null,
|
|
863
|
+
"mutationFrom": "C",
|
|
864
|
+
"mutationTo": "T",
|
|
865
|
+
"position": 22674
|
|
866
|
+
},
|
|
867
|
+
{
|
|
868
|
+
"mutation": "T22679C",
|
|
869
|
+
"count": 2995,
|
|
870
|
+
"proportion": 0.9996662216288384,
|
|
871
|
+
"sequenceName": null,
|
|
872
|
+
"mutationFrom": "T",
|
|
873
|
+
"mutationTo": "C",
|
|
874
|
+
"position": 22679
|
|
875
|
+
},
|
|
876
|
+
{
|
|
877
|
+
"mutation": "C22686T",
|
|
878
|
+
"count": 2993,
|
|
879
|
+
"proportion": 1.0,
|
|
880
|
+
"sequenceName": null,
|
|
881
|
+
"mutationFrom": "C",
|
|
882
|
+
"mutationTo": "T",
|
|
883
|
+
"position": 22686
|
|
884
|
+
},
|
|
885
|
+
{
|
|
886
|
+
"mutation": "A22688G",
|
|
887
|
+
"count": 2979,
|
|
888
|
+
"proportion": 0.9983243967828418,
|
|
889
|
+
"sequenceName": null,
|
|
890
|
+
"mutationFrom": "A",
|
|
891
|
+
"mutationTo": "G",
|
|
892
|
+
"position": 22688
|
|
893
|
+
},
|
|
894
|
+
{
|
|
895
|
+
"mutation": "G22770A",
|
|
896
|
+
"count": 2939,
|
|
897
|
+
"proportion": 0.996609020006782,
|
|
898
|
+
"sequenceName": null,
|
|
899
|
+
"mutationFrom": "G",
|
|
900
|
+
"mutationTo": "A",
|
|
901
|
+
"position": 22770
|
|
902
|
+
},
|
|
903
|
+
{
|
|
904
|
+
"mutation": "G22775A",
|
|
905
|
+
"count": 3001,
|
|
906
|
+
"proportion": 0.9993339993339994,
|
|
907
|
+
"sequenceName": null,
|
|
908
|
+
"mutationFrom": "G",
|
|
909
|
+
"mutationTo": "A",
|
|
910
|
+
"position": 22775
|
|
911
|
+
},
|
|
912
|
+
{
|
|
913
|
+
"mutation": "A22786C",
|
|
914
|
+
"count": 2996,
|
|
915
|
+
"proportion": 0.9946879150066401,
|
|
916
|
+
"sequenceName": null,
|
|
917
|
+
"mutationFrom": "A",
|
|
918
|
+
"mutationTo": "C",
|
|
919
|
+
"position": 22786
|
|
920
|
+
},
|
|
921
|
+
{
|
|
922
|
+
"mutation": "G22813T",
|
|
923
|
+
"count": 2962,
|
|
924
|
+
"proportion": 0.9986513823331086,
|
|
925
|
+
"sequenceName": null,
|
|
926
|
+
"mutationFrom": "G",
|
|
927
|
+
"mutationTo": "T",
|
|
928
|
+
"position": 22813
|
|
929
|
+
},
|
|
930
|
+
{
|
|
931
|
+
"mutation": "T22882G",
|
|
932
|
+
"count": 2935,
|
|
933
|
+
"proportion": 0.9993190330268982,
|
|
934
|
+
"sequenceName": null,
|
|
935
|
+
"mutationFrom": "T",
|
|
936
|
+
"mutationTo": "G",
|
|
937
|
+
"position": 22882
|
|
938
|
+
},
|
|
939
|
+
{
|
|
940
|
+
"mutation": "G22895C",
|
|
941
|
+
"count": 2932,
|
|
942
|
+
"proportion": 0.9986376021798365,
|
|
943
|
+
"sequenceName": null,
|
|
944
|
+
"mutationFrom": "G",
|
|
945
|
+
"mutationTo": "C",
|
|
946
|
+
"position": 22895
|
|
947
|
+
},
|
|
948
|
+
{
|
|
949
|
+
"mutation": "T22896A",
|
|
950
|
+
"count": 2918,
|
|
951
|
+
"proportion": 0.9948857824752813,
|
|
952
|
+
"sequenceName": null,
|
|
953
|
+
"mutationFrom": "T",
|
|
954
|
+
"mutationTo": "A",
|
|
955
|
+
"position": 22896
|
|
956
|
+
},
|
|
957
|
+
{
|
|
958
|
+
"mutation": "G22898A",
|
|
959
|
+
"count": 2932,
|
|
960
|
+
"proportion": 0.9996590521650187,
|
|
961
|
+
"sequenceName": null,
|
|
962
|
+
"mutationFrom": "G",
|
|
963
|
+
"mutationTo": "A",
|
|
964
|
+
"position": 22898
|
|
965
|
+
},
|
|
966
|
+
{
|
|
967
|
+
"mutation": "A22910G",
|
|
968
|
+
"count": 2941,
|
|
969
|
+
"proportion": 0.99932042133877,
|
|
970
|
+
"sequenceName": null,
|
|
971
|
+
"mutationFrom": "A",
|
|
972
|
+
"mutationTo": "G",
|
|
973
|
+
"position": 22910
|
|
974
|
+
},
|
|
975
|
+
{
|
|
976
|
+
"mutation": "C22916T",
|
|
977
|
+
"count": 2936,
|
|
978
|
+
"proportion": 0.998639455782313,
|
|
979
|
+
"sequenceName": null,
|
|
980
|
+
"mutationFrom": "C",
|
|
981
|
+
"mutationTo": "T",
|
|
982
|
+
"position": 22916
|
|
983
|
+
},
|
|
984
|
+
{
|
|
985
|
+
"mutation": "T22917G",
|
|
986
|
+
"count": 2939,
|
|
987
|
+
"proportion": 0.9993199591975519,
|
|
988
|
+
"sequenceName": null,
|
|
989
|
+
"mutationFrom": "T",
|
|
990
|
+
"mutationTo": "G",
|
|
991
|
+
"position": 22917
|
|
992
|
+
},
|
|
993
|
+
{
|
|
994
|
+
"mutation": "T22926C",
|
|
995
|
+
"count": 2941,
|
|
996
|
+
"proportion": 0.9989809782608695,
|
|
997
|
+
"sequenceName": null,
|
|
998
|
+
"mutationFrom": "T",
|
|
999
|
+
"mutationTo": "C",
|
|
1000
|
+
"position": 22926
|
|
1001
|
+
},
|
|
1002
|
+
{
|
|
1003
|
+
"mutation": "T22928C",
|
|
1004
|
+
"count": 875,
|
|
1005
|
+
"proportion": 0.29883879781420764,
|
|
1006
|
+
"sequenceName": null,
|
|
1007
|
+
"mutationFrom": "T",
|
|
1008
|
+
"mutationTo": "C",
|
|
1009
|
+
"position": 22928
|
|
1010
|
+
},
|
|
1011
|
+
{
|
|
1012
|
+
"mutation": "T22942A",
|
|
1013
|
+
"count": 2946,
|
|
1014
|
+
"proportion": 0.999660671869698,
|
|
1015
|
+
"sequenceName": null,
|
|
1016
|
+
"mutationFrom": "T",
|
|
1017
|
+
"mutationTo": "A",
|
|
1018
|
+
"position": 22942
|
|
1019
|
+
},
|
|
1020
|
+
{
|
|
1021
|
+
"mutation": "G22992A",
|
|
1022
|
+
"count": 2965,
|
|
1023
|
+
"proportion": 0.998989218328841,
|
|
1024
|
+
"sequenceName": null,
|
|
1025
|
+
"mutationFrom": "G",
|
|
1026
|
+
"mutationTo": "A",
|
|
1027
|
+
"position": 22992
|
|
1028
|
+
},
|
|
1029
|
+
{
|
|
1030
|
+
"mutation": "C22995A",
|
|
1031
|
+
"count": 2962,
|
|
1032
|
+
"proportion": 0.9979784366576819,
|
|
1033
|
+
"sequenceName": null,
|
|
1034
|
+
"mutationFrom": "C",
|
|
1035
|
+
"mutationTo": "A",
|
|
1036
|
+
"position": 22995
|
|
1037
|
+
},
|
|
1038
|
+
{
|
|
1039
|
+
"mutation": "T23005A",
|
|
1040
|
+
"count": 2933,
|
|
1041
|
+
"proportion": 0.9986380660537963,
|
|
1042
|
+
"sequenceName": null,
|
|
1043
|
+
"mutationFrom": "T",
|
|
1044
|
+
"mutationTo": "A",
|
|
1045
|
+
"position": 23005
|
|
1046
|
+
},
|
|
1047
|
+
{
|
|
1048
|
+
"mutation": "G23009-",
|
|
1049
|
+
"count": 2888,
|
|
1050
|
+
"proportion": 0.9951757408683667,
|
|
1051
|
+
"sequenceName": null,
|
|
1052
|
+
"mutationFrom": "G",
|
|
1053
|
+
"mutationTo": "-",
|
|
1054
|
+
"position": 23009
|
|
1055
|
+
},
|
|
1056
|
+
{
|
|
1057
|
+
"mutation": "T23010-",
|
|
1058
|
+
"count": 2888,
|
|
1059
|
+
"proportion": 0.9951757408683667,
|
|
1060
|
+
"sequenceName": null,
|
|
1061
|
+
"mutationFrom": "T",
|
|
1062
|
+
"mutationTo": "-",
|
|
1063
|
+
"position": 23010
|
|
1064
|
+
},
|
|
1065
|
+
{
|
|
1066
|
+
"mutation": "T23011-",
|
|
1067
|
+
"count": 2888,
|
|
1068
|
+
"proportion": 0.9803122878479293,
|
|
1069
|
+
"sequenceName": null,
|
|
1070
|
+
"mutationFrom": "T",
|
|
1071
|
+
"mutationTo": "-",
|
|
1072
|
+
"position": 23011
|
|
1073
|
+
},
|
|
1074
|
+
{
|
|
1075
|
+
"mutation": "G23012A",
|
|
1076
|
+
"count": 2954,
|
|
1077
|
+
"proportion": 0.9983102399459277,
|
|
1078
|
+
"sequenceName": null,
|
|
1079
|
+
"mutationFrom": "G",
|
|
1080
|
+
"mutationTo": "A",
|
|
1081
|
+
"position": 23012
|
|
1082
|
+
},
|
|
1083
|
+
{
|
|
1084
|
+
"mutation": "T23018C",
|
|
1085
|
+
"count": 2954,
|
|
1086
|
+
"proportion": 0.9983102399459277,
|
|
1087
|
+
"sequenceName": null,
|
|
1088
|
+
"mutationFrom": "T",
|
|
1089
|
+
"mutationTo": "C",
|
|
1090
|
+
"position": 23018
|
|
1091
|
+
},
|
|
1092
|
+
{
|
|
1093
|
+
"mutation": "T23019C",
|
|
1094
|
+
"count": 2961,
|
|
1095
|
+
"proportion": 0.9983142279163857,
|
|
1096
|
+
"sequenceName": null,
|
|
1097
|
+
"mutationFrom": "T",
|
|
1098
|
+
"mutationTo": "C",
|
|
1099
|
+
"position": 23019
|
|
1100
|
+
},
|
|
1101
|
+
{
|
|
1102
|
+
"mutation": "A23055G",
|
|
1103
|
+
"count": 2965,
|
|
1104
|
+
"proportion": 0.998989218328841,
|
|
1105
|
+
"sequenceName": null,
|
|
1106
|
+
"mutationFrom": "A",
|
|
1107
|
+
"mutationTo": "G",
|
|
1108
|
+
"position": 23055
|
|
1109
|
+
},
|
|
1110
|
+
{
|
|
1111
|
+
"mutation": "A23063T",
|
|
1112
|
+
"count": 2970,
|
|
1113
|
+
"proportion": 1.0,
|
|
1114
|
+
"sequenceName": null,
|
|
1115
|
+
"mutationFrom": "A",
|
|
1116
|
+
"mutationTo": "T",
|
|
1117
|
+
"position": 23063
|
|
1118
|
+
},
|
|
1119
|
+
{
|
|
1120
|
+
"mutation": "T23075C",
|
|
1121
|
+
"count": 2962,
|
|
1122
|
+
"proportion": 0.995965030262273,
|
|
1123
|
+
"sequenceName": null,
|
|
1124
|
+
"mutationFrom": "T",
|
|
1125
|
+
"mutationTo": "C",
|
|
1126
|
+
"position": 23075
|
|
1127
|
+
},
|
|
1128
|
+
{
|
|
1129
|
+
"mutation": "G23222A",
|
|
1130
|
+
"count": 3035,
|
|
1131
|
+
"proportion": 0.9996706192358367,
|
|
1132
|
+
"sequenceName": null,
|
|
1133
|
+
"mutationFrom": "G",
|
|
1134
|
+
"mutationTo": "A",
|
|
1135
|
+
"position": 23222
|
|
1136
|
+
},
|
|
1137
|
+
{
|
|
1138
|
+
"mutation": "C23271T",
|
|
1139
|
+
"count": 3037,
|
|
1140
|
+
"proportion": 0.999670836076366,
|
|
1141
|
+
"sequenceName": null,
|
|
1142
|
+
"mutationFrom": "C",
|
|
1143
|
+
"mutationTo": "T",
|
|
1144
|
+
"position": 23271
|
|
1145
|
+
},
|
|
1146
|
+
{
|
|
1147
|
+
"mutation": "C23277T",
|
|
1148
|
+
"count": 944,
|
|
1149
|
+
"proportion": 0.31185992732077966,
|
|
1150
|
+
"sequenceName": null,
|
|
1151
|
+
"mutationFrom": "C",
|
|
1152
|
+
"mutationTo": "T",
|
|
1153
|
+
"position": 23277
|
|
1154
|
+
},
|
|
1155
|
+
{
|
|
1156
|
+
"mutation": "A23403G",
|
|
1157
|
+
"count": 3037,
|
|
1158
|
+
"proportion": 1.0,
|
|
1159
|
+
"sequenceName": null,
|
|
1160
|
+
"mutationFrom": "A",
|
|
1161
|
+
"mutationTo": "G",
|
|
1162
|
+
"position": 23403
|
|
1163
|
+
},
|
|
1164
|
+
{
|
|
1165
|
+
"mutation": "C23423T",
|
|
1166
|
+
"count": 3036,
|
|
1167
|
+
"proportion": 0.9996707276918011,
|
|
1168
|
+
"sequenceName": null,
|
|
1169
|
+
"mutationFrom": "C",
|
|
1170
|
+
"mutationTo": "T",
|
|
1171
|
+
"position": 23423
|
|
1172
|
+
},
|
|
1173
|
+
{
|
|
1174
|
+
"mutation": "C23525T",
|
|
1175
|
+
"count": 2853,
|
|
1176
|
+
"proportion": 0.9992994746059545,
|
|
1177
|
+
"sequenceName": null,
|
|
1178
|
+
"mutationFrom": "C",
|
|
1179
|
+
"mutationTo": "T",
|
|
1180
|
+
"position": 23525
|
|
1181
|
+
},
|
|
1182
|
+
{
|
|
1183
|
+
"mutation": "T23599G",
|
|
1184
|
+
"count": 2987,
|
|
1185
|
+
"proportion": 0.9903846153846154,
|
|
1186
|
+
"sequenceName": null,
|
|
1187
|
+
"mutationFrom": "T",
|
|
1188
|
+
"mutationTo": "G",
|
|
1189
|
+
"position": 23599
|
|
1190
|
+
},
|
|
1191
|
+
{
|
|
1192
|
+
"mutation": "C23604G",
|
|
1193
|
+
"count": 3005,
|
|
1194
|
+
"proportion": 0.9943745863666446,
|
|
1195
|
+
"sequenceName": null,
|
|
1196
|
+
"mutationFrom": "C",
|
|
1197
|
+
"mutationTo": "G",
|
|
1198
|
+
"position": 23604
|
|
1199
|
+
},
|
|
1200
|
+
{
|
|
1201
|
+
"mutation": "C23854A",
|
|
1202
|
+
"count": 3022,
|
|
1203
|
+
"proportion": 0.9996692027786966,
|
|
1204
|
+
"sequenceName": null,
|
|
1205
|
+
"mutationFrom": "C",
|
|
1206
|
+
"mutationTo": "A",
|
|
1207
|
+
"position": 23854
|
|
1208
|
+
},
|
|
1209
|
+
{
|
|
1210
|
+
"mutation": "G23948T",
|
|
1211
|
+
"count": 3006,
|
|
1212
|
+
"proportion": 0.9996674426338543,
|
|
1213
|
+
"sequenceName": null,
|
|
1214
|
+
"mutationFrom": "G",
|
|
1215
|
+
"mutationTo": "T",
|
|
1216
|
+
"position": 23948
|
|
1217
|
+
},
|
|
1218
|
+
{
|
|
1219
|
+
"mutation": "C24378T",
|
|
1220
|
+
"count": 2843,
|
|
1221
|
+
"proportion": 0.9874956582146579,
|
|
1222
|
+
"sequenceName": null,
|
|
1223
|
+
"mutationFrom": "C",
|
|
1224
|
+
"mutationTo": "T",
|
|
1225
|
+
"position": 24378
|
|
1226
|
+
},
|
|
1227
|
+
{
|
|
1228
|
+
"mutation": "A24424T",
|
|
1229
|
+
"count": 2874,
|
|
1230
|
+
"proportion": 0.9996521739130435,
|
|
1231
|
+
"sequenceName": null,
|
|
1232
|
+
"mutationFrom": "A",
|
|
1233
|
+
"mutationTo": "T",
|
|
1234
|
+
"position": 24424
|
|
1235
|
+
},
|
|
1236
|
+
{
|
|
1237
|
+
"mutation": "T24469A",
|
|
1238
|
+
"count": 2903,
|
|
1239
|
+
"proportion": 0.9969093406593407,
|
|
1240
|
+
"sequenceName": null,
|
|
1241
|
+
"mutationFrom": "T",
|
|
1242
|
+
"mutationTo": "A",
|
|
1243
|
+
"position": 24469
|
|
1244
|
+
},
|
|
1245
|
+
{
|
|
1246
|
+
"mutation": "G24821T",
|
|
1247
|
+
"count": 220,
|
|
1248
|
+
"proportion": 0.07275132275132275,
|
|
1249
|
+
"sequenceName": null,
|
|
1250
|
+
"mutationFrom": "G",
|
|
1251
|
+
"mutationTo": "T",
|
|
1252
|
+
"position": 24821
|
|
1253
|
+
},
|
|
1254
|
+
{
|
|
1255
|
+
"mutation": "G24872T",
|
|
1256
|
+
"count": 560,
|
|
1257
|
+
"proportion": 0.18543046357615894,
|
|
1258
|
+
"sequenceName": null,
|
|
1259
|
+
"mutationFrom": "G",
|
|
1260
|
+
"mutationTo": "T",
|
|
1261
|
+
"position": 24872
|
|
1262
|
+
},
|
|
1263
|
+
{
|
|
1264
|
+
"mutation": "C24990T",
|
|
1265
|
+
"count": 3028,
|
|
1266
|
+
"proportion": 0.9993399339933994,
|
|
1267
|
+
"sequenceName": null,
|
|
1268
|
+
"mutationFrom": "C",
|
|
1269
|
+
"mutationTo": "T",
|
|
1270
|
+
"position": 24990
|
|
1271
|
+
},
|
|
1272
|
+
{
|
|
1273
|
+
"mutation": "C25000T",
|
|
1274
|
+
"count": 3028,
|
|
1275
|
+
"proportion": 0.9993399339933994,
|
|
1276
|
+
"sequenceName": null,
|
|
1277
|
+
"mutationFrom": "C",
|
|
1278
|
+
"mutationTo": "T",
|
|
1279
|
+
"position": 25000
|
|
1280
|
+
},
|
|
1281
|
+
{
|
|
1282
|
+
"mutation": "G25012T",
|
|
1283
|
+
"count": 428,
|
|
1284
|
+
"proportion": 0.1418157720344599,
|
|
1285
|
+
"sequenceName": null,
|
|
1286
|
+
"mutationFrom": "G",
|
|
1287
|
+
"mutationTo": "T",
|
|
1288
|
+
"position": 25012
|
|
1289
|
+
},
|
|
1290
|
+
{
|
|
1291
|
+
"mutation": "C25207T",
|
|
1292
|
+
"count": 2980,
|
|
1293
|
+
"proportion": 0.9979906229068989,
|
|
1294
|
+
"sequenceName": null,
|
|
1295
|
+
"mutationFrom": "C",
|
|
1296
|
+
"mutationTo": "T",
|
|
1297
|
+
"position": 25207
|
|
1298
|
+
},
|
|
1299
|
+
{
|
|
1300
|
+
"mutation": "C25566T",
|
|
1301
|
+
"count": 431,
|
|
1302
|
+
"proportion": 0.14224422442244225,
|
|
1303
|
+
"sequenceName": null,
|
|
1304
|
+
"mutationFrom": "C",
|
|
1305
|
+
"mutationTo": "T",
|
|
1306
|
+
"position": 25566
|
|
1307
|
+
},
|
|
1308
|
+
{
|
|
1309
|
+
"mutation": "C25584T",
|
|
1310
|
+
"count": 3041,
|
|
1311
|
+
"proportion": 1.0,
|
|
1312
|
+
"sequenceName": null,
|
|
1313
|
+
"mutationFrom": "C",
|
|
1314
|
+
"mutationTo": "T",
|
|
1315
|
+
"position": 25584
|
|
1316
|
+
},
|
|
1317
|
+
{
|
|
1318
|
+
"mutation": "C25680T",
|
|
1319
|
+
"count": 232,
|
|
1320
|
+
"proportion": 0.07649192218925156,
|
|
1321
|
+
"sequenceName": null,
|
|
1322
|
+
"mutationFrom": "C",
|
|
1323
|
+
"mutationTo": "T",
|
|
1324
|
+
"position": 25680
|
|
1325
|
+
},
|
|
1326
|
+
{
|
|
1327
|
+
"mutation": "C26060T",
|
|
1328
|
+
"count": 3010,
|
|
1329
|
+
"proportion": 1.0,
|
|
1330
|
+
"sequenceName": null,
|
|
1331
|
+
"mutationFrom": "C",
|
|
1332
|
+
"mutationTo": "T",
|
|
1333
|
+
"position": 26060
|
|
1334
|
+
},
|
|
1335
|
+
{
|
|
1336
|
+
"mutation": "C26270T",
|
|
1337
|
+
"count": 3006,
|
|
1338
|
+
"proportion": 1.0,
|
|
1339
|
+
"sequenceName": null,
|
|
1340
|
+
"mutationFrom": "C",
|
|
1341
|
+
"mutationTo": "T",
|
|
1342
|
+
"position": 26270
|
|
1343
|
+
},
|
|
1344
|
+
{
|
|
1345
|
+
"mutation": "G26529C",
|
|
1346
|
+
"count": 3024,
|
|
1347
|
+
"proportion": 1.0,
|
|
1348
|
+
"sequenceName": null,
|
|
1349
|
+
"mutationFrom": "G",
|
|
1350
|
+
"mutationTo": "C",
|
|
1351
|
+
"position": 26529
|
|
1352
|
+
},
|
|
1353
|
+
{
|
|
1354
|
+
"mutation": "C26577G",
|
|
1355
|
+
"count": 2992,
|
|
1356
|
+
"proportion": 0.9993319973279893,
|
|
1357
|
+
"sequenceName": null,
|
|
1358
|
+
"mutationFrom": "C",
|
|
1359
|
+
"mutationTo": "G",
|
|
1360
|
+
"position": 26577
|
|
1361
|
+
},
|
|
1362
|
+
{
|
|
1363
|
+
"mutation": "A26610G",
|
|
1364
|
+
"count": 2865,
|
|
1365
|
+
"proportion": 0.9899792674498963,
|
|
1366
|
+
"sequenceName": null,
|
|
1367
|
+
"mutationFrom": "A",
|
|
1368
|
+
"mutationTo": "G",
|
|
1369
|
+
"position": 26610
|
|
1370
|
+
},
|
|
1371
|
+
{
|
|
1372
|
+
"mutation": "C26681T",
|
|
1373
|
+
"count": 3023,
|
|
1374
|
+
"proportion": 1.0,
|
|
1375
|
+
"sequenceName": null,
|
|
1376
|
+
"mutationFrom": "C",
|
|
1377
|
+
"mutationTo": "T",
|
|
1378
|
+
"position": 26681
|
|
1379
|
+
},
|
|
1380
|
+
{
|
|
1381
|
+
"mutation": "G26709A",
|
|
1382
|
+
"count": 3007,
|
|
1383
|
+
"proportion": 1.0,
|
|
1384
|
+
"sequenceName": null,
|
|
1385
|
+
"mutationFrom": "G",
|
|
1386
|
+
"mutationTo": "A",
|
|
1387
|
+
"position": 26709
|
|
1388
|
+
},
|
|
1389
|
+
{
|
|
1390
|
+
"mutation": "C26833T",
|
|
1391
|
+
"count": 3034,
|
|
1392
|
+
"proportion": 1.0,
|
|
1393
|
+
"sequenceName": null,
|
|
1394
|
+
"mutationFrom": "C",
|
|
1395
|
+
"mutationTo": "T",
|
|
1396
|
+
"position": 26833
|
|
1397
|
+
},
|
|
1398
|
+
{
|
|
1399
|
+
"mutation": "C26858T",
|
|
1400
|
+
"count": 3027,
|
|
1401
|
+
"proportion": 0.9986803035301881,
|
|
1402
|
+
"sequenceName": null,
|
|
1403
|
+
"mutationFrom": "C",
|
|
1404
|
+
"mutationTo": "T",
|
|
1405
|
+
"position": 26858
|
|
1406
|
+
},
|
|
1407
|
+
{
|
|
1408
|
+
"mutation": "C26894T",
|
|
1409
|
+
"count": 260,
|
|
1410
|
+
"proportion": 0.08583690987124463,
|
|
1411
|
+
"sequenceName": null,
|
|
1412
|
+
"mutationFrom": "C",
|
|
1413
|
+
"mutationTo": "T",
|
|
1414
|
+
"position": 26894
|
|
1415
|
+
},
|
|
1416
|
+
{
|
|
1417
|
+
"mutation": "A27259C",
|
|
1418
|
+
"count": 3040,
|
|
1419
|
+
"proportion": 1.0,
|
|
1420
|
+
"sequenceName": null,
|
|
1421
|
+
"mutationFrom": "A",
|
|
1422
|
+
"mutationTo": "C",
|
|
1423
|
+
"position": 27259
|
|
1424
|
+
},
|
|
1425
|
+
{
|
|
1426
|
+
"mutation": "G27382C",
|
|
1427
|
+
"count": 3035,
|
|
1428
|
+
"proportion": 0.999012508229098,
|
|
1429
|
+
"sequenceName": null,
|
|
1430
|
+
"mutationFrom": "G",
|
|
1431
|
+
"mutationTo": "C",
|
|
1432
|
+
"position": 27382
|
|
1433
|
+
},
|
|
1434
|
+
{
|
|
1435
|
+
"mutation": "A27383T",
|
|
1436
|
+
"count": 3035,
|
|
1437
|
+
"proportion": 0.999012508229098,
|
|
1438
|
+
"sequenceName": null,
|
|
1439
|
+
"mutationFrom": "A",
|
|
1440
|
+
"mutationTo": "T",
|
|
1441
|
+
"position": 27383
|
|
1442
|
+
},
|
|
1443
|
+
{
|
|
1444
|
+
"mutation": "T27384C",
|
|
1445
|
+
"count": 3029,
|
|
1446
|
+
"proportion": 0.9970375246872942,
|
|
1447
|
+
"sequenceName": null,
|
|
1448
|
+
"mutationFrom": "T",
|
|
1449
|
+
"mutationTo": "C",
|
|
1450
|
+
"position": 27384
|
|
1451
|
+
},
|
|
1452
|
+
{
|
|
1453
|
+
"mutation": "C27476T",
|
|
1454
|
+
"count": 208,
|
|
1455
|
+
"proportion": 0.06855636123928807,
|
|
1456
|
+
"sequenceName": null,
|
|
1457
|
+
"mutationFrom": "C",
|
|
1458
|
+
"mutationTo": "T",
|
|
1459
|
+
"position": 27476
|
|
1460
|
+
},
|
|
1461
|
+
{
|
|
1462
|
+
"mutation": "C27807T",
|
|
1463
|
+
"count": 3020,
|
|
1464
|
+
"proportion": 1.0,
|
|
1465
|
+
"sequenceName": null,
|
|
1466
|
+
"mutationFrom": "C",
|
|
1467
|
+
"mutationTo": "T",
|
|
1468
|
+
"position": 27807
|
|
1469
|
+
},
|
|
1470
|
+
{
|
|
1471
|
+
"mutation": "T27810C",
|
|
1472
|
+
"count": 3022,
|
|
1473
|
+
"proportion": 1.0,
|
|
1474
|
+
"sequenceName": null,
|
|
1475
|
+
"mutationFrom": "T",
|
|
1476
|
+
"mutationTo": "C",
|
|
1477
|
+
"position": 27810
|
|
1478
|
+
},
|
|
1479
|
+
{
|
|
1480
|
+
"mutation": "A28271T",
|
|
1481
|
+
"count": 3021,
|
|
1482
|
+
"proportion": 0.9990079365079365,
|
|
1483
|
+
"sequenceName": null,
|
|
1484
|
+
"mutationFrom": "A",
|
|
1485
|
+
"mutationTo": "T",
|
|
1486
|
+
"position": 28271
|
|
1487
|
+
},
|
|
1488
|
+
{
|
|
1489
|
+
"mutation": "C28311T",
|
|
1490
|
+
"count": 3021,
|
|
1491
|
+
"proportion": 0.9986776859504132,
|
|
1492
|
+
"sequenceName": null,
|
|
1493
|
+
"mutationFrom": "C",
|
|
1494
|
+
"mutationTo": "T",
|
|
1495
|
+
"position": 28311
|
|
1496
|
+
},
|
|
1497
|
+
{
|
|
1498
|
+
"mutation": "G28362-",
|
|
1499
|
+
"count": 3004,
|
|
1500
|
+
"proportion": 0.9937148527952365,
|
|
1501
|
+
"sequenceName": null,
|
|
1502
|
+
"mutationFrom": "G",
|
|
1503
|
+
"mutationTo": "-",
|
|
1504
|
+
"position": 28362
|
|
1505
|
+
},
|
|
1506
|
+
{
|
|
1507
|
+
"mutation": "A28363-",
|
|
1508
|
+
"count": 3004,
|
|
1509
|
+
"proportion": 0.9943727242634889,
|
|
1510
|
+
"sequenceName": null,
|
|
1511
|
+
"mutationFrom": "A",
|
|
1512
|
+
"mutationTo": "-",
|
|
1513
|
+
"position": 28363
|
|
1514
|
+
},
|
|
1515
|
+
{
|
|
1516
|
+
"mutation": "G28364-",
|
|
1517
|
+
"count": 3004,
|
|
1518
|
+
"proportion": 0.9943727242634889,
|
|
1519
|
+
"sequenceName": null,
|
|
1520
|
+
"mutationFrom": "G",
|
|
1521
|
+
"mutationTo": "-",
|
|
1522
|
+
"position": 28364
|
|
1523
|
+
},
|
|
1524
|
+
{
|
|
1525
|
+
"mutation": "A28365-",
|
|
1526
|
+
"count": 3004,
|
|
1527
|
+
"proportion": 0.9943727242634889,
|
|
1528
|
+
"sequenceName": null,
|
|
1529
|
+
"mutationFrom": "A",
|
|
1530
|
+
"mutationTo": "-",
|
|
1531
|
+
"position": 28365
|
|
1532
|
+
},
|
|
1533
|
+
{
|
|
1534
|
+
"mutation": "A28366-",
|
|
1535
|
+
"count": 3004,
|
|
1536
|
+
"proportion": 0.9943727242634889,
|
|
1537
|
+
"sequenceName": null,
|
|
1538
|
+
"mutationFrom": "A",
|
|
1539
|
+
"mutationTo": "-",
|
|
1540
|
+
"position": 28366
|
|
1541
|
+
},
|
|
1542
|
+
{
|
|
1543
|
+
"mutation": "C28367-",
|
|
1544
|
+
"count": 3004,
|
|
1545
|
+
"proportion": 0.9943727242634889,
|
|
1546
|
+
"sequenceName": null,
|
|
1547
|
+
"mutationFrom": "C",
|
|
1548
|
+
"mutationTo": "-",
|
|
1549
|
+
"position": 28367
|
|
1550
|
+
},
|
|
1551
|
+
{
|
|
1552
|
+
"mutation": "G28368-",
|
|
1553
|
+
"count": 3004,
|
|
1554
|
+
"proportion": 0.9943727242634889,
|
|
1555
|
+
"sequenceName": null,
|
|
1556
|
+
"mutationFrom": "G",
|
|
1557
|
+
"mutationTo": "-",
|
|
1558
|
+
"position": 28368
|
|
1559
|
+
},
|
|
1560
|
+
{
|
|
1561
|
+
"mutation": "C28369-",
|
|
1562
|
+
"count": 3004,
|
|
1563
|
+
"proportion": 0.9943727242634889,
|
|
1564
|
+
"sequenceName": null,
|
|
1565
|
+
"mutationFrom": "C",
|
|
1566
|
+
"mutationTo": "-",
|
|
1567
|
+
"position": 28369
|
|
1568
|
+
},
|
|
1569
|
+
{
|
|
1570
|
+
"mutation": "A28370-",
|
|
1571
|
+
"count": 3003,
|
|
1572
|
+
"proportion": 0.9940417080436942,
|
|
1573
|
+
"sequenceName": null,
|
|
1574
|
+
"mutationFrom": "A",
|
|
1575
|
+
"mutationTo": "-",
|
|
1576
|
+
"position": 28370
|
|
1577
|
+
},
|
|
1578
|
+
{
|
|
1579
|
+
"mutation": "G28881A",
|
|
1580
|
+
"count": 3034,
|
|
1581
|
+
"proportion": 0.9993412384716732,
|
|
1582
|
+
"sequenceName": null,
|
|
1583
|
+
"mutationFrom": "G",
|
|
1584
|
+
"mutationTo": "A",
|
|
1585
|
+
"position": 28881
|
|
1586
|
+
},
|
|
1587
|
+
{
|
|
1588
|
+
"mutation": "G28882A",
|
|
1589
|
+
"count": 3034,
|
|
1590
|
+
"proportion": 0.9993412384716732,
|
|
1591
|
+
"sequenceName": null,
|
|
1592
|
+
"mutationFrom": "G",
|
|
1593
|
+
"mutationTo": "A",
|
|
1594
|
+
"position": 28882
|
|
1595
|
+
},
|
|
1596
|
+
{
|
|
1597
|
+
"mutation": "G28883C",
|
|
1598
|
+
"count": 3034,
|
|
1599
|
+
"proportion": 0.9993412384716732,
|
|
1600
|
+
"sequenceName": null,
|
|
1601
|
+
"mutationFrom": "G",
|
|
1602
|
+
"mutationTo": "C",
|
|
1603
|
+
"position": 28883
|
|
1604
|
+
},
|
|
1605
|
+
{
|
|
1606
|
+
"mutation": "C28958A",
|
|
1607
|
+
"count": 3010,
|
|
1608
|
+
"proportion": 0.9914361001317523,
|
|
1609
|
+
"sequenceName": null,
|
|
1610
|
+
"mutationFrom": "C",
|
|
1611
|
+
"mutationTo": "A",
|
|
1612
|
+
"position": 28958
|
|
1613
|
+
},
|
|
1614
|
+
{
|
|
1615
|
+
"mutation": "A29510C",
|
|
1616
|
+
"count": 3014,
|
|
1617
|
+
"proportion": 1.0,
|
|
1618
|
+
"sequenceName": null,
|
|
1619
|
+
"mutationFrom": "A",
|
|
1620
|
+
"mutationTo": "C",
|
|
1621
|
+
"position": 29510
|
|
1622
|
+
},
|
|
1623
|
+
{
|
|
1624
|
+
"mutation": "G29734-",
|
|
1625
|
+
"count": 1898,
|
|
1626
|
+
"proportion": 0.9663951120162932,
|
|
1627
|
+
"sequenceName": null,
|
|
1628
|
+
"mutationFrom": "G",
|
|
1629
|
+
"mutationTo": "-",
|
|
1630
|
+
"position": 29734
|
|
1631
|
+
},
|
|
1632
|
+
{
|
|
1633
|
+
"mutation": "A29735-",
|
|
1634
|
+
"count": 1897,
|
|
1635
|
+
"proportion": 0.9683511995916284,
|
|
1636
|
+
"sequenceName": null,
|
|
1637
|
+
"mutationFrom": "A",
|
|
1638
|
+
"mutationTo": "-",
|
|
1639
|
+
"position": 29735
|
|
1640
|
+
},
|
|
1641
|
+
{
|
|
1642
|
+
"mutation": "G29736-",
|
|
1643
|
+
"count": 1897,
|
|
1644
|
+
"proportion": 0.9683511995916284,
|
|
1645
|
+
"sequenceName": null,
|
|
1646
|
+
"mutationFrom": "G",
|
|
1647
|
+
"mutationTo": "-",
|
|
1648
|
+
"position": 29736
|
|
1649
|
+
},
|
|
1650
|
+
{
|
|
1651
|
+
"mutation": "G29737-",
|
|
1652
|
+
"count": 1897,
|
|
1653
|
+
"proportion": 0.9683511995916284,
|
|
1654
|
+
"sequenceName": null,
|
|
1655
|
+
"mutationFrom": "G",
|
|
1656
|
+
"mutationTo": "-",
|
|
1657
|
+
"position": 29737
|
|
1658
|
+
},
|
|
1659
|
+
{
|
|
1660
|
+
"mutation": "C29738-",
|
|
1661
|
+
"count": 1897,
|
|
1662
|
+
"proportion": 0.9683511995916284,
|
|
1663
|
+
"sequenceName": null,
|
|
1664
|
+
"mutationFrom": "C",
|
|
1665
|
+
"mutationTo": "-",
|
|
1666
|
+
"position": 29738
|
|
1667
|
+
},
|
|
1668
|
+
{
|
|
1669
|
+
"mutation": "C29739-",
|
|
1670
|
+
"count": 1897,
|
|
1671
|
+
"proportion": 0.9683511995916284,
|
|
1672
|
+
"sequenceName": null,
|
|
1673
|
+
"mutationFrom": "C",
|
|
1674
|
+
"mutationTo": "-",
|
|
1675
|
+
"position": 29739
|
|
1676
|
+
},
|
|
1677
|
+
{
|
|
1678
|
+
"mutation": "A29740-",
|
|
1679
|
+
"count": 1897,
|
|
1680
|
+
"proportion": 0.9688457609805925,
|
|
1681
|
+
"sequenceName": null,
|
|
1682
|
+
"mutationFrom": "A",
|
|
1683
|
+
"mutationTo": "-",
|
|
1684
|
+
"position": 29740
|
|
1685
|
+
},
|
|
1686
|
+
{
|
|
1687
|
+
"mutation": "C29741-",
|
|
1688
|
+
"count": 1897,
|
|
1689
|
+
"proportion": 0.9688457609805925,
|
|
1690
|
+
"sequenceName": null,
|
|
1691
|
+
"mutationFrom": "C",
|
|
1692
|
+
"mutationTo": "-",
|
|
1693
|
+
"position": 29741
|
|
1694
|
+
},
|
|
1695
|
+
{
|
|
1696
|
+
"mutation": "G29742-",
|
|
1697
|
+
"count": 1897,
|
|
1698
|
+
"proportion": 0.9688457609805925,
|
|
1699
|
+
"sequenceName": null,
|
|
1700
|
+
"mutationFrom": "G",
|
|
1701
|
+
"mutationTo": "-",
|
|
1702
|
+
"position": 29742
|
|
1703
|
+
},
|
|
1704
|
+
{
|
|
1705
|
+
"mutation": "C29743-",
|
|
1706
|
+
"count": 1897,
|
|
1707
|
+
"proportion": 0.9688457609805925,
|
|
1708
|
+
"sequenceName": null,
|
|
1709
|
+
"mutationFrom": "C",
|
|
1710
|
+
"mutationTo": "-",
|
|
1711
|
+
"position": 29743
|
|
1712
|
+
},
|
|
1713
|
+
{
|
|
1714
|
+
"mutation": "G29744-",
|
|
1715
|
+
"count": 1897,
|
|
1716
|
+
"proportion": 0.9688457609805925,
|
|
1717
|
+
"sequenceName": null,
|
|
1718
|
+
"mutationFrom": "G",
|
|
1719
|
+
"mutationTo": "-",
|
|
1720
|
+
"position": 29744
|
|
1721
|
+
},
|
|
1722
|
+
{
|
|
1723
|
+
"mutation": "G29745-",
|
|
1724
|
+
"count": 1897,
|
|
1725
|
+
"proportion": 0.9688457609805925,
|
|
1726
|
+
"sequenceName": null,
|
|
1727
|
+
"mutationFrom": "G",
|
|
1728
|
+
"mutationTo": "-",
|
|
1729
|
+
"position": 29745
|
|
1730
|
+
},
|
|
1731
|
+
{
|
|
1732
|
+
"mutation": "A29746-",
|
|
1733
|
+
"count": 1897,
|
|
1734
|
+
"proportion": 0.9688457609805925,
|
|
1735
|
+
"sequenceName": null,
|
|
1736
|
+
"mutationFrom": "A",
|
|
1737
|
+
"mutationTo": "-",
|
|
1738
|
+
"position": 29746
|
|
1739
|
+
},
|
|
1740
|
+
{
|
|
1741
|
+
"mutation": "G29747-",
|
|
1742
|
+
"count": 1897,
|
|
1743
|
+
"proportion": 0.9688457609805925,
|
|
1744
|
+
"sequenceName": null,
|
|
1745
|
+
"mutationFrom": "G",
|
|
1746
|
+
"mutationTo": "-",
|
|
1747
|
+
"position": 29747
|
|
1748
|
+
},
|
|
1749
|
+
{
|
|
1750
|
+
"mutation": "T29748-",
|
|
1751
|
+
"count": 1896,
|
|
1752
|
+
"proportion": 0.9683350357507661,
|
|
1753
|
+
"sequenceName": null,
|
|
1754
|
+
"mutationFrom": "T",
|
|
1755
|
+
"mutationTo": "-",
|
|
1756
|
+
"position": 29748
|
|
1757
|
+
},
|
|
1758
|
+
{
|
|
1759
|
+
"mutation": "A29749-",
|
|
1760
|
+
"count": 1896,
|
|
1761
|
+
"proportion": 0.9683350357507661,
|
|
1762
|
+
"sequenceName": null,
|
|
1763
|
+
"mutationFrom": "A",
|
|
1764
|
+
"mutationTo": "-",
|
|
1765
|
+
"position": 29749
|
|
1766
|
+
},
|
|
1767
|
+
{
|
|
1768
|
+
"mutation": "C29750-",
|
|
1769
|
+
"count": 1896,
|
|
1770
|
+
"proportion": 0.9683350357507661,
|
|
1771
|
+
"sequenceName": null,
|
|
1772
|
+
"mutationFrom": "C",
|
|
1773
|
+
"mutationTo": "-",
|
|
1774
|
+
"position": 29750
|
|
1775
|
+
},
|
|
1776
|
+
{
|
|
1777
|
+
"mutation": "G29751-",
|
|
1778
|
+
"count": 1897,
|
|
1779
|
+
"proportion": 0.9688457609805925,
|
|
1780
|
+
"sequenceName": null,
|
|
1781
|
+
"mutationFrom": "G",
|
|
1782
|
+
"mutationTo": "-",
|
|
1783
|
+
"position": 29751
|
|
1784
|
+
},
|
|
1785
|
+
{
|
|
1786
|
+
"mutation": "A29752-",
|
|
1787
|
+
"count": 1897,
|
|
1788
|
+
"proportion": 0.9688457609805925,
|
|
1789
|
+
"sequenceName": null,
|
|
1790
|
+
"mutationFrom": "A",
|
|
1791
|
+
"mutationTo": "-",
|
|
1792
|
+
"position": 29752
|
|
1793
|
+
},
|
|
1794
|
+
{
|
|
1795
|
+
"mutation": "T29753-",
|
|
1796
|
+
"count": 1897,
|
|
1797
|
+
"proportion": 0.9688457609805925,
|
|
1798
|
+
"sequenceName": null,
|
|
1799
|
+
"mutationFrom": "T",
|
|
1800
|
+
"mutationTo": "-",
|
|
1801
|
+
"position": 29753
|
|
1802
|
+
},
|
|
1803
|
+
{
|
|
1804
|
+
"mutation": "C29754-",
|
|
1805
|
+
"count": 1897,
|
|
1806
|
+
"proportion": 0.9688457609805925,
|
|
1807
|
+
"sequenceName": null,
|
|
1808
|
+
"mutationFrom": "C",
|
|
1809
|
+
"mutationTo": "-",
|
|
1810
|
+
"position": 29754
|
|
1811
|
+
},
|
|
1812
|
+
{
|
|
1813
|
+
"mutation": "G29755-",
|
|
1814
|
+
"count": 1897,
|
|
1815
|
+
"proportion": 0.9688457609805925,
|
|
1816
|
+
"sequenceName": null,
|
|
1817
|
+
"mutationFrom": "G",
|
|
1818
|
+
"mutationTo": "-",
|
|
1819
|
+
"position": 29755
|
|
1820
|
+
},
|
|
1821
|
+
{
|
|
1822
|
+
"mutation": "A29756-",
|
|
1823
|
+
"count": 1897,
|
|
1824
|
+
"proportion": 0.9688457609805925,
|
|
1825
|
+
"sequenceName": null,
|
|
1826
|
+
"mutationFrom": "A",
|
|
1827
|
+
"mutationTo": "-",
|
|
1828
|
+
"position": 29756
|
|
1829
|
+
},
|
|
1830
|
+
{
|
|
1831
|
+
"mutation": "G29757-",
|
|
1832
|
+
"count": 1897,
|
|
1833
|
+
"proportion": 0.9688457609805925,
|
|
1834
|
+
"sequenceName": null,
|
|
1835
|
+
"mutationFrom": "G",
|
|
1836
|
+
"mutationTo": "-",
|
|
1837
|
+
"position": 29757
|
|
1838
|
+
},
|
|
1839
|
+
{
|
|
1840
|
+
"mutation": "T29758-",
|
|
1841
|
+
"count": 1897,
|
|
1842
|
+
"proportion": 0.9688457609805925,
|
|
1843
|
+
"sequenceName": null,
|
|
1844
|
+
"mutationFrom": "T",
|
|
1845
|
+
"mutationTo": "-",
|
|
1846
|
+
"position": 29758
|
|
1847
|
+
},
|
|
1848
|
+
{
|
|
1849
|
+
"mutation": "G29759-",
|
|
1850
|
+
"count": 1896,
|
|
1851
|
+
"proportion": 0.9683350357507661,
|
|
1852
|
+
"sequenceName": null,
|
|
1853
|
+
"mutationFrom": "G",
|
|
1854
|
+
"mutationTo": "-",
|
|
1855
|
+
"position": 29759
|
|
1856
|
+
}
|
|
1857
|
+
],
|
|
1858
|
+
"info": {
|
|
1859
|
+
"dataVersion": "1720033519",
|
|
1860
|
+
"requestId": "3f36cdd2-49ba-41ce-92ec-43dfa1c30e1e",
|
|
1861
|
+
"requestInfo": "sars_cov-2_nextstrain_open on lapis.cov-spectrum.org at 2024-07-17T14:53:28.677114291",
|
|
1862
|
+
"reportTo": "Please report to https://github.com/GenSpectrum/LAPIS/issues in case you encounter any unexpected issues. Please include the request ID and the requestInfo in your report."
|
|
1863
|
+
}
|
|
1864
|
+
}
|