@genspectrum/dashboard-components 0.4.4 → 0.4.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/custom-elements.json +107 -12
- package/dist/dashboard-components.js +186 -145
- package/dist/dashboard-components.js.map +1 -1
- package/dist/genspectrum-components.d.ts +24 -0
- package/package.json +1 -1
- package/src/preact/aggregatedData/aggregate-table.tsx +3 -2
- package/src/preact/aggregatedData/aggregate.stories.tsx +2 -0
- package/src/preact/aggregatedData/aggregate.tsx +8 -3
- package/src/preact/components/table.stories.tsx +51 -1
- package/src/preact/components/table.tsx +4 -3
- package/src/preact/locationFilter/location-filter.stories.tsx +12 -1
- package/src/preact/locationFilter/location-filter.tsx +10 -3
- package/src/preact/mutationComparison/mutation-comparison-table.tsx +7 -2
- package/src/preact/mutationComparison/mutation-comparison.stories.tsx +3 -0
- package/src/preact/mutationComparison/mutation-comparison.tsx +25 -3
- package/src/preact/mutations/mutations-grid.tsx +8 -2
- package/src/preact/mutations/mutations-insertions-table.tsx +3 -2
- package/src/preact/mutations/mutations-table.tsx +3 -2
- package/src/preact/mutations/mutations.stories.tsx +3 -0
- package/src/preact/mutations/mutations.tsx +16 -6
- package/src/preact/prevalenceOverTime/prevalence-over-time-table.tsx +3 -2
- package/src/preact/prevalenceOverTime/prevalence-over-time.stories.tsx +4 -0
- package/src/preact/prevalenceOverTime/prevalence-over-time.tsx +8 -1
- package/src/web-components/input/gs-location-filter.stories.ts +11 -0
- package/src/web-components/input/gs-location-filter.tsx +14 -1
- package/src/web-components/visualization/gs-aggregate.stories.ts +4 -0
- package/src/web-components/visualization/gs-aggregate.tsx +8 -0
- package/src/web-components/visualization/gs-mutation-comparison.stories.ts +4 -0
- package/src/web-components/visualization/gs-mutation-comparison.tsx +8 -0
- package/src/web-components/visualization/gs-mutations.stories.ts +4 -0
- package/src/web-components/visualization/gs-mutations.tsx +8 -0
- package/src/web-components/visualization/gs-prevalence-over-time.stories.ts +5 -0
- package/src/web-components/visualization/gs-prevalence-over-time.tsx +12 -4
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pageSize
|
|
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|
}) => {
|
|
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|
const lapis = P(LapisUrlContext);
|
|
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|
const { data, error, isLoading } = useQuery(async () => {
|
|
@@ -1737,9 +1726,22 @@ const MutationComparisonInner = ({
|
|
|
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|
if (data === null) {
|
|
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return /* @__PURE__ */ u$1(NoDataDisplay, {});
|
|
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}
|
|
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return /* @__PURE__ */ u$1(
|
|
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return /* @__PURE__ */ u$1(
|
|
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MutationComparisonTabs,
|
|
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|
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{
|
|
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|
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data: data.mutationData,
|
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sequenceType,
|
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views,
|
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pageSize
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}
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);
|
|
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const MutationComparisonTabs = ({
|
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|
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const MutationComparisonTabs = ({
|
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data,
|
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views,
|
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sequenceType,
|
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pageSize
|
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}) => {
|
|
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|
const [proportionInterval, setProportionInterval] = p({ min: 0.5, max: 1 });
|
|
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|
const [displayedMutationTypes, setDisplayedMutationTypes] = p([
|
|
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|
{ label: "Substitutions", checked: true, type: "substitution" },
|
|
@@ -1759,7 +1761,8 @@ const MutationComparisonTabs = ({ data, views, sequenceType }) => {
|
|
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MutationComparisonTable,
|
|
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{
|
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data: { content: filteredData },
|
|
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proportionInterval,
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pageSize
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}
|
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)
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|
|
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|
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|
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result = (kind ? decorator(target, key, result) : decorator(result)) || result;
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if (kind && result)
|
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__defProp$9(target, key, result);
|
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|
|
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|
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|
|
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|
};
|
|
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|
const tailwindElementCss = unsafeCSS(tailwindStyle);
|
|
@@ -4620,8 +4622,7 @@ var __decorateClass$8 = (decorators, target, key, kind) => {
|
|
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for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
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|
|
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|
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__defProp$8(target, key, result);
|
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|
|
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|
|
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|
};
|
|
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|
let MutationComparisonComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
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|
|
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|
this.width = "100%";
|
|
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|
|
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|
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|
|
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|
|
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|
}
|
|
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|
render() {
|
|
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|
return /* @__PURE__ */ u$1(
|
|
@@ -4643,7 +4645,8 @@ let MutationComparisonComponent = class extends PreactLitAdapterWithGridJsStyles
|
|
|
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|
views: this.views,
|
|
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|
width: this.width,
|
|
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|
height: this.height,
|
|
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headline: this.headline
|
|
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headline: this.headline,
|
|
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pageSize: this.pageSize
|
|
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|
}
|
|
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|
);
|
|
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|
}
|
|
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|
|
|
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|
__decorateClass$8([
|
|
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4670
|
n2({ type: String })
|
|
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|
], MutationComparisonComponent.prototype, "headline", 2);
|
|
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|
+
__decorateClass$8([
|
|
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|
+
n2({ type: Object })
|
|
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|
+
], MutationComparisonComponent.prototype, "pageSize", 2);
|
|
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|
MutationComparisonComponent = __decorateClass$8([
|
|
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|
t$2("gs-mutation-comparison")
|
|
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4677
|
], MutationComparisonComponent);
|
|
@@ -4758,7 +4764,12 @@ const byProportion = (row, proportionInterval) => {
|
|
|
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4764
|
return !cell.isReference && cell.proportion >= proportionInterval.min && cell.proportion <= proportionInterval.max;
|
|
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|
});
|
|
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|
};
|
|
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|
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const MutationsGrid = ({
|
|
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|
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const MutationsGrid = ({
|
|
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|
+
data,
|
|
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|
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sequenceType,
|
|
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|
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proportionInterval,
|
|
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|
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pageSize
|
|
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|
+
}) => {
|
|
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|
const getHeaders = () => {
|
|
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|
return [
|
|
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4775
|
{
|
|
@@ -4811,7 +4822,7 @@ const MutationsGrid = ({ data, sequenceType, proportionInterval }) => {
|
|
|
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4822
|
return {};
|
|
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4823
|
};
|
|
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|
const tableData = getMutationsGridData(data, sequenceType, proportionInterval).map((row) => Object.values(row));
|
|
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|
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return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(),
|
|
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|
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return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(), pageSize });
|
|
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|
};
|
|
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4827
|
const sortInsertions = (a2, b3) => {
|
|
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4828
|
if (a2.segment !== b3.segment) {
|
|
@@ -4822,7 +4833,7 @@ const sortInsertions = (a2, b3) => {
|
|
|
4822
4833
|
}
|
|
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4834
|
return a2.insertedSymbols.localeCompare(b3.insertedSymbols);
|
|
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|
};
|
|
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|
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const InsertionsTable = ({ data }) => {
|
|
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|
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const InsertionsTable = ({ data, pageSize }) => {
|
|
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4837
|
const getHeaders = () => {
|
|
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4838
|
return [
|
|
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|
{
|
|
@@ -4841,9 +4852,9 @@ const InsertionsTable = ({ data }) => {
|
|
|
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4852
|
];
|
|
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4853
|
};
|
|
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4854
|
const tableData = getInsertionsTableData(data).map((row) => Object.values(row));
|
|
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|
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return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(),
|
|
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|
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return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(), pageSize });
|
|
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4856
|
};
|
|
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|
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const MutationsTable = ({ data, proportionInterval }) => {
|
|
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|
+
const MutationsTable = ({ data, proportionInterval, pageSize }) => {
|
|
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4858
|
const getHeaders = () => {
|
|
4848
4859
|
return [
|
|
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4860
|
{
|
|
@@ -4871,7 +4882,7 @@ const MutationsTable = ({ data, proportionInterval }) => {
|
|
|
4871
4882
|
];
|
|
4872
4883
|
};
|
|
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4884
|
const tableData = getMutationsTableData(data, proportionInterval).map((row) => Object.values(row));
|
|
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|
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return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(),
|
|
4885
|
+
return /* @__PURE__ */ u$1(Table, { data: tableData, columns: getHeaders(), pageSize });
|
|
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4886
|
};
|
|
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4887
|
class FetchInsertionsOperator {
|
|
4877
4888
|
constructor(filter, sequenceType) {
|
|
@@ -4933,12 +4944,13 @@ const Mutations = ({
|
|
|
4933
4944
|
views,
|
|
4934
4945
|
width,
|
|
4935
4946
|
height,
|
|
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|
-
headline = "Mutations"
|
|
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|
+
headline = "Mutations",
|
|
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|
+
pageSize
|
|
4937
4949
|
}) => {
|
|
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4950
|
const size2 = { height, width };
|
|
4939
|
-
return /* @__PURE__ */ u$1(ErrorBoundary, { size: size2, headline, children: /* @__PURE__ */ u$1(ResizeContainer, { size: size2, children: /* @__PURE__ */ u$1(Headline, { heading: headline, children: /* @__PURE__ */ u$1(MutationsInner, { variant, sequenceType, views }) }) }) });
|
|
4951
|
+
return /* @__PURE__ */ u$1(ErrorBoundary, { size: size2, headline, children: /* @__PURE__ */ u$1(ResizeContainer, { size: size2, children: /* @__PURE__ */ u$1(Headline, { heading: headline, children: /* @__PURE__ */ u$1(MutationsInner, { variant, sequenceType, views, pageSize }) }) }) });
|
|
4940
4952
|
};
|
|
4941
|
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const MutationsInner = ({ variant, sequenceType, views }) => {
|
|
4953
|
+
const MutationsInner = ({ variant, sequenceType, views, pageSize }) => {
|
|
4942
4954
|
const lapis = P(LapisUrlContext);
|
|
4943
4955
|
const { data, error, isLoading } = useQuery(async () => {
|
|
4944
4956
|
return queryMutationsData(variant, sequenceType, lapis);
|
|
@@ -4952,9 +4964,9 @@ const MutationsInner = ({ variant, sequenceType, views }) => {
|
|
|
4952
4964
|
if (data === null) {
|
|
4953
4965
|
return /* @__PURE__ */ u$1(NoDataDisplay, {});
|
|
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4966
|
}
|
|
4955
|
-
return /* @__PURE__ */ u$1(MutationsTabs, { mutationsData: data, sequenceType, views });
|
|
4967
|
+
return /* @__PURE__ */ u$1(MutationsTabs, { mutationsData: data, sequenceType, views, pageSize });
|
|
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4968
|
};
|
|
4957
|
-
const MutationsTabs = ({ mutationsData, sequenceType, views }) => {
|
|
4969
|
+
const MutationsTabs = ({ mutationsData, sequenceType, views, pageSize }) => {
|
|
4958
4970
|
const [proportionInterval, setProportionInterval] = p({ min: 0.05, max: 1 });
|
|
4959
4971
|
const [displayedSegments, setDisplayedSegments] = useDisplayedSegments(sequenceType);
|
|
4960
4972
|
const [displayedMutationTypes, setDisplayedMutationTypes] = p([
|
|
@@ -4967,7 +4979,14 @@ const MutationsTabs = ({ mutationsData, sequenceType, views }) => {
|
|
|
4967
4979
|
case "table":
|
|
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4980
|
return {
|
|
4969
4981
|
title: "Table",
|
|
4970
|
-
content: /* @__PURE__ */ u$1(
|
|
4982
|
+
content: /* @__PURE__ */ u$1(
|
|
4983
|
+
MutationsTable,
|
|
4984
|
+
{
|
|
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|
+
data: filteredData.tableData,
|
|
4986
|
+
proportionInterval,
|
|
4987
|
+
pageSize
|
|
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|
+
}
|
|
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|
+
)
|
|
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|
};
|
|
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4991
|
case "grid":
|
|
4973
4992
|
return {
|
|
@@ -4977,14 +4996,15 @@ const MutationsTabs = ({ mutationsData, sequenceType, views }) => {
|
|
|
4977
4996
|
{
|
|
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4997
|
data: filteredData.gridData,
|
|
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|
sequenceType,
|
|
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|
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proportionInterval
|
|
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|
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proportionInterval,
|
|
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|
+
pageSize
|
|
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|
}
|
|
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5002
|
)
|
|
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5003
|
};
|
|
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5004
|
case "insertions":
|
|
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5005
|
return {
|
|
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5006
|
title: "Insertions",
|
|
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|
-
content: /* @__PURE__ */ u$1(InsertionsTable, { data: filteredData.insertions })
|
|
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|
+
content: /* @__PURE__ */ u$1(InsertionsTable, { data: filteredData.insertions, pageSize })
|
|
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|
};
|
|
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5009
|
}
|
|
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5010
|
};
|
|
@@ -5064,8 +5084,7 @@ var __decorateClass$7 = (decorators, target, key, kind) => {
|
|
|
5064
5084
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
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5085
|
if (decorator = decorators[i2])
|
|
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|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
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|
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if (kind && result)
|
|
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|
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__defProp$7(target, key, result);
|
|
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|
+
if (kind && result) __defProp$7(target, key, result);
|
|
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5088
|
return result;
|
|
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5089
|
};
|
|
5071
5090
|
let MutationsComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
@@ -5077,6 +5096,7 @@ let MutationsComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
|
5077
5096
|
this.width = "100%";
|
|
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5097
|
this.height = "700px";
|
|
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5098
|
this.headline = "Mutations";
|
|
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|
+
this.pageSize = false;
|
|
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|
}
|
|
5081
5101
|
render() {
|
|
5082
5102
|
return /* @__PURE__ */ u$1(
|
|
@@ -5087,7 +5107,8 @@ let MutationsComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
|
5087
5107
|
views: this.views,
|
|
5088
5108
|
width: this.width,
|
|
5089
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|
height: this.height,
|
|
5090
|
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headline: this.headline
|
|
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|
+
headline: this.headline,
|
|
5111
|
+
pageSize: this.pageSize
|
|
5091
5112
|
}
|
|
5092
5113
|
);
|
|
5093
5114
|
}
|
|
@@ -5110,6 +5131,9 @@ __decorateClass$7([
|
|
|
5110
5131
|
__decorateClass$7([
|
|
5111
5132
|
n2({ type: String })
|
|
5112
5133
|
], MutationsComponent.prototype, "headline", 2);
|
|
5134
|
+
__decorateClass$7([
|
|
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|
+
n2({ type: Object })
|
|
5136
|
+
], MutationsComponent.prototype, "pageSize", 2);
|
|
5113
5137
|
MutationsComponent = __decorateClass$7([
|
|
5114
5138
|
t$2("gs-mutations")
|
|
5115
5139
|
], MutationsComponent);
|
|
@@ -5317,8 +5341,7 @@ const en = {
|
|
|
5317
5341
|
};
|
|
5318
5342
|
var padStart = function padStart2(string, length, pad) {
|
|
5319
5343
|
var s2 = String(string);
|
|
5320
|
-
if (!s2 || s2.length >= length)
|
|
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|
-
return string;
|
|
5344
|
+
if (!s2 || s2.length >= length) return string;
|
|
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5345
|
return "" + Array(length + 1 - s2.length).join(pad) + string;
|
|
5323
5346
|
};
|
|
5324
5347
|
var padZoneStr = function padZoneStr2(instance) {
|
|
@@ -5329,8 +5352,7 @@ var padZoneStr = function padZoneStr2(instance) {
|
|
|
5329
5352
|
return (negMinutes <= 0 ? "+" : "-") + padStart(hourOffset, 2, "0") + ":" + padStart(minuteOffset, 2, "0");
|
|
5330
5353
|
};
|
|
5331
5354
|
var monthDiff = function monthDiff2(a2, b3) {
|
|
5332
|
-
if (a2.date() < b3.date())
|
|
5333
|
-
return -monthDiff2(b3, a2);
|
|
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|
+
if (a2.date() < b3.date()) return -monthDiff2(b3, a2);
|
|
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5356
|
var wholeMonthDiff = (b3.year() - a2.year()) * 12 + (b3.month() - a2.month());
|
|
5335
5357
|
var anchor = a2.clone().add(wholeMonthDiff, M);
|
|
5336
5358
|
var c2 = b3 - anchor < 0;
|
|
@@ -5375,8 +5397,7 @@ var isDayjs = function isDayjs2(d2) {
|
|
|
5375
5397
|
};
|
|
5376
5398
|
var parseLocale = function parseLocale2(preset, object, isLocal) {
|
|
5377
5399
|
var l2;
|
|
5378
|
-
if (!preset)
|
|
5379
|
-
return L;
|
|
5400
|
+
if (!preset) return L;
|
|
5380
5401
|
if (typeof preset === "string") {
|
|
5381
5402
|
var presetLower = preset.toLowerCase();
|
|
5382
5403
|
if (Ls[presetLower]) {
|
|
@@ -5395,8 +5416,7 @@ var parseLocale = function parseLocale2(preset, object, isLocal) {
|
|
|
5395
5416
|
Ls[name] = preset;
|
|
5396
5417
|
l2 = name;
|
|
5397
5418
|
}
|
|
5398
|
-
if (!isLocal && l2)
|
|
5399
|
-
L = l2;
|
|
5419
|
+
if (!isLocal && l2) L = l2;
|
|
5400
5420
|
return l2 || !isLocal && L;
|
|
5401
5421
|
};
|
|
5402
5422
|
var dayjs = function dayjs2(date, c2) {
|
|
@@ -5423,12 +5443,9 @@ Utils.i = isDayjs;
|
|
|
5423
5443
|
Utils.w = wrapper;
|
|
5424
5444
|
var parseDate = function parseDate2(cfg) {
|
|
5425
5445
|
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if (date === null)
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|
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if (
|
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return /* @__PURE__ */ new Date();
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|
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if (date instanceof Date)
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return new Date(date);
|
|
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|
+
if (date === null) return /* @__PURE__ */ new Date(NaN);
|
|
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|
+
if (Utils.u(date)) return /* @__PURE__ */ new Date();
|
|
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|
+
if (date instanceof Date) return new Date(date);
|
|
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|
if (typeof date === "string" && !/Z$/i.test(date)) {
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|
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|
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if (d2) {
|
|
@@ -5482,8 +5499,7 @@ var Dayjs = /* @__PURE__ */ function() {
|
|
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|
return this.endOf(units) < dayjs(that);
|
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|
};
|
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|
_proto.$g = function $g(input, get, set) {
|
|
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|
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if (Utils.u(input))
|
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|
-
return this[get];
|
|
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|
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if (Utils.u(input)) return this[get];
|
|
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|
return this.set(set, input);
|
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|
};
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|
_proto.unix = function unix() {
|
|
@@ -5548,8 +5564,7 @@ var Dayjs = /* @__PURE__ */ function() {
|
|
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|
date.$d[name](arg);
|
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|
date.init();
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|
this.$d = date.set(DATE, Math.min(this.$D, date.daysInMonth())).$d;
|
|
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|
-
} else if (name)
|
|
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|
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this.$d[name](arg);
|
|
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|
+
} else if (name) this.$d[name](arg);
|
|
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|
this.init();
|
|
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|
return this;
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|
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|
};
|
|
@@ -5589,8 +5604,7 @@ var Dayjs = /* @__PURE__ */ function() {
|
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|
_proto.format = function format(formatStr) {
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|
var _this3 = this;
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|
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|
var locale = this.$locale();
|
|
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|
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if (!this.isValid())
|
|
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|
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return locale.invalidDate || INVALID_DATE_STRING;
|
|
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|
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if (!this.isValid()) return locale.invalidDate || INVALID_DATE_STRING;
|
|
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|
var str = formatStr || FORMAT_DEFAULT;
|
|
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|
var zoneStr = Utils.z(this);
|
|
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var $H = this.$H, $m = this.$m, $M = this.$M;
|
|
@@ -5713,12 +5727,10 @@ var Dayjs = /* @__PURE__ */ function() {
|
|
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|
return Ls[this.$L];
|
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|
};
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|
_proto.locale = function locale(preset, object) {
|
|
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if (!preset)
|
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|
-
return this.$L;
|
|
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|
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if (!preset) return this.$L;
|
|
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|
var that = this.clone();
|
|
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|
var nextLocaleName = parseLocale(preset, object, true);
|
|
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if (nextLocaleName)
|
|
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|
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that.$L = nextLocaleName;
|
|
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|
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if (nextLocaleName) that.$L = nextLocaleName;
|
|
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|
return that;
|
|
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|
};
|
|
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|
_proto.clone = function clone() {
|
|
@@ -6319,7 +6331,7 @@ const tooltip$1 = (confidenceIntervalMethod) => {
|
|
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|
return generalConfig;
|
|
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|
}
|
|
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|
};
|
|
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|
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const PrevalenceOverTimeTable = ({ data, granularity }) => {
|
|
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|
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const PrevalenceOverTimeTable = ({ data, granularity, pageSize }) => {
|
|
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|
const getSplitColumns = (data2) => {
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|
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|
return data2.map((dataset) => ({
|
|
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|
name: dataset.displayName,
|
|
@@ -6347,7 +6359,7 @@ const PrevalenceOverTimeTable = ({ data, granularity }) => {
|
|
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6359
|
const dataByHeader = getPrevalenceOverTimeTableData(data2, granularity2);
|
|
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|
return Object.values(dataByHeader).map((row) => Object.values(row));
|
|
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|
};
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|
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|
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return /* @__PURE__ */ u$1(Table, { data: getData(data, granularity), columns: getColumns(data),
|
|
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|
+
return /* @__PURE__ */ u$1(Table, { data: getData(data, granularity), columns: getColumns(data), pageSize });
|
|
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|
};
|
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|
class DivisionOperator {
|
|
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|
constructor(numerator, denominator, keyField, valueField, resultField, numeratorField, denominatorField) {
|
|
@@ -6663,7 +6675,8 @@ const PrevalenceOverTime = ({
|
|
|
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6675
|
width,
|
|
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6676
|
height,
|
|
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|
headline = "Prevalence over time",
|
|
6666
|
-
lapisDateField
|
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|
+
lapisDateField,
|
|
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|
+
pageSize
|
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|
}) => {
|
|
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const size2 = { height, width };
|
|
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|
return /* @__PURE__ */ u$1(ErrorBoundary, { size: size2, headline, children: /* @__PURE__ */ u$1(ResizeContainer, { size: size2, children: /* @__PURE__ */ u$1(Headline, { heading: headline, children: /* @__PURE__ */ u$1(
|
|
@@ -6675,7 +6688,8 @@ const PrevalenceOverTime = ({
|
|
|
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6688
|
smoothingWindow,
|
|
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|
views,
|
|
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|
confidenceIntervalMethods,
|
|
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|
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lapisDateField
|
|
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|
+
lapisDateField,
|
|
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|
+
pageSize
|
|
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|
}
|
|
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|
) }) }) });
|
|
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|
};
|
|
@@ -6686,7 +6700,8 @@ const PrevalenceOverTimeInner = ({
|
|
|
6686
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|
smoothingWindow,
|
|
6687
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|
views,
|
|
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6702
|
confidenceIntervalMethods,
|
|
6689
|
-
lapisDateField
|
|
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|
+
lapisDateField,
|
|
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|
+
pageSize
|
|
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|
}) => {
|
|
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6706
|
const lapis = P(LapisUrlContext);
|
|
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6707
|
const { data, error, isLoading } = useQuery(
|
|
@@ -6708,7 +6723,8 @@ const PrevalenceOverTimeInner = ({
|
|
|
6708
6723
|
views,
|
|
6709
6724
|
data,
|
|
6710
6725
|
granularity,
|
|
6711
|
-
confidenceIntervalMethods
|
|
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|
+
confidenceIntervalMethods,
|
|
6727
|
+
pageSize
|
|
6712
6728
|
}
|
|
6713
6729
|
);
|
|
6714
6730
|
};
|
|
@@ -6716,7 +6732,8 @@ const PrevalenceOverTimeTabs = ({
|
|
|
6716
6732
|
views,
|
|
6717
6733
|
data,
|
|
6718
6734
|
granularity,
|
|
6719
|
-
confidenceIntervalMethods
|
|
6735
|
+
confidenceIntervalMethods,
|
|
6736
|
+
pageSize
|
|
6720
6737
|
}) => {
|
|
6721
6738
|
const [yAxisScaleType, setYAxisScaleType] = p("linear");
|
|
6722
6739
|
const [confidenceIntervalMethod, setConfidenceIntervalMethod] = p(
|
|
@@ -6756,7 +6773,7 @@ const PrevalenceOverTimeTabs = ({
|
|
|
6756
6773
|
case "table":
|
|
6757
6774
|
return {
|
|
6758
6775
|
title: "Table",
|
|
6759
|
-
content: /* @__PURE__ */ u$1(PrevalenceOverTimeTable, { data, granularity })
|
|
6776
|
+
content: /* @__PURE__ */ u$1(PrevalenceOverTimeTable, { data, granularity, pageSize })
|
|
6760
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|
};
|
|
6761
6778
|
}
|
|
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6779
|
};
|
|
@@ -6820,8 +6837,7 @@ var __decorateClass$6 = (decorators, target, key, kind) => {
|
|
|
6820
6837
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
6821
6838
|
if (decorator = decorators[i2])
|
|
6822
6839
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
6823
|
-
if (kind && result)
|
|
6824
|
-
__defProp$6(target, key, result);
|
|
6840
|
+
if (kind && result) __defProp$6(target, key, result);
|
|
6825
6841
|
return result;
|
|
6826
6842
|
};
|
|
6827
6843
|
let PrevalenceOverTimeComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
@@ -6837,6 +6853,7 @@ let PrevalenceOverTimeComponent = class extends PreactLitAdapterWithGridJsStyles
|
|
|
6837
6853
|
this.width = "100%";
|
|
6838
6854
|
this.height = "700px";
|
|
6839
6855
|
this.lapisDateField = "date";
|
|
6856
|
+
this.pageSize = false;
|
|
6840
6857
|
}
|
|
6841
6858
|
render() {
|
|
6842
6859
|
return /* @__PURE__ */ u$1(
|
|
@@ -6851,7 +6868,8 @@ let PrevalenceOverTimeComponent = class extends PreactLitAdapterWithGridJsStyles
|
|
|
6851
6868
|
width: this.width,
|
|
6852
6869
|
height: this.height,
|
|
6853
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|
headline: this.headline,
|
|
6854
|
-
lapisDateField: this.lapisDateField
|
|
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|
+
lapisDateField: this.lapisDateField,
|
|
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|
+
pageSize: this.pageSize
|
|
6855
6873
|
}
|
|
6856
6874
|
);
|
|
6857
6875
|
}
|
|
@@ -6886,6 +6904,9 @@ __decorateClass$6([
|
|
|
6886
6904
|
__decorateClass$6([
|
|
6887
6905
|
n2({ type: String })
|
|
6888
6906
|
], PrevalenceOverTimeComponent.prototype, "lapisDateField", 2);
|
|
6907
|
+
__decorateClass$6([
|
|
6908
|
+
n2({ type: Object })
|
|
6909
|
+
], PrevalenceOverTimeComponent.prototype, "pageSize", 2);
|
|
6889
6910
|
PrevalenceOverTimeComponent = __decorateClass$6([
|
|
6890
6911
|
t$2("gs-prevalence-over-time")
|
|
6891
6912
|
], PrevalenceOverTimeComponent);
|
|
@@ -7206,8 +7227,7 @@ var __decorateClass$5 = (decorators, target, key, kind) => {
|
|
|
7206
7227
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
7207
7228
|
if (decorator = decorators[i2])
|
|
7208
7229
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
7209
|
-
if (kind && result)
|
|
7210
|
-
__defProp$5(target, key, result);
|
|
7230
|
+
if (kind && result) __defProp$5(target, key, result);
|
|
7211
7231
|
return result;
|
|
7212
7232
|
};
|
|
7213
7233
|
let RelativeGrowthAdvantageComponent = class extends PreactLitAdapter {
|
|
@@ -7265,7 +7285,7 @@ __decorateClass$5([
|
|
|
7265
7285
|
RelativeGrowthAdvantageComponent = __decorateClass$5([
|
|
7266
7286
|
t$2("gs-relative-growth-advantage")
|
|
7267
7287
|
], RelativeGrowthAdvantageComponent);
|
|
7268
|
-
const AggregateTable = ({ data, fields }) => {
|
|
7288
|
+
const AggregateTable = ({ data, fields, pageSize }) => {
|
|
7269
7289
|
const headers = [
|
|
7270
7290
|
...fields.map((field) => {
|
|
7271
7291
|
return {
|
|
@@ -7283,7 +7303,7 @@ const AggregateTable = ({ data, fields }) => {
|
|
|
7283
7303
|
formatter: (cell) => formatProportion(cell)
|
|
7284
7304
|
}
|
|
7285
7305
|
];
|
|
7286
|
-
return /* @__PURE__ */ u$1(Table, { data, columns: headers,
|
|
7306
|
+
return /* @__PURE__ */ u$1(Table, { data, columns: headers, pageSize });
|
|
7287
7307
|
};
|
|
7288
7308
|
const compareAscending = (a2, b3) => {
|
|
7289
7309
|
if (typeof a2 === "number" && typeof b3 === "number") {
|
|
@@ -7318,6 +7338,7 @@ const Aggregate = ({
|
|
|
7318
7338
|
headline = "Mutations",
|
|
7319
7339
|
filter,
|
|
7320
7340
|
fields,
|
|
7341
|
+
pageSize,
|
|
7321
7342
|
initialSortField,
|
|
7322
7343
|
initialSortDirection
|
|
7323
7344
|
}) => {
|
|
@@ -7329,7 +7350,8 @@ const Aggregate = ({
|
|
|
7329
7350
|
filter,
|
|
7330
7351
|
views,
|
|
7331
7352
|
initialSortField,
|
|
7332
|
-
initialSortDirection
|
|
7353
|
+
initialSortDirection,
|
|
7354
|
+
pageSize
|
|
7333
7355
|
}
|
|
7334
7356
|
) }) }) });
|
|
7335
7357
|
};
|
|
@@ -7338,7 +7360,8 @@ const AggregateInner = ({
|
|
|
7338
7360
|
views,
|
|
7339
7361
|
filter,
|
|
7340
7362
|
initialSortField,
|
|
7341
|
-
initialSortDirection
|
|
7363
|
+
initialSortDirection,
|
|
7364
|
+
pageSize
|
|
7342
7365
|
}) => {
|
|
7343
7366
|
const lapis = P(LapisUrlContext);
|
|
7344
7367
|
const { data, error, isLoading } = useQuery(async () => {
|
|
@@ -7353,15 +7376,15 @@ const AggregateInner = ({
|
|
|
7353
7376
|
if (data === null) {
|
|
7354
7377
|
return /* @__PURE__ */ u$1(NoDataDisplay, {});
|
|
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7378
|
}
|
|
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|
-
return /* @__PURE__ */ u$1(AggregatedDataTabs, { data, views, fields });
|
|
7379
|
+
return /* @__PURE__ */ u$1(AggregatedDataTabs, { data, views, fields, pageSize });
|
|
7357
7380
|
};
|
|
7358
|
-
const AggregatedDataTabs = ({ data, views, fields }) => {
|
|
7381
|
+
const AggregatedDataTabs = ({ data, views, fields, pageSize }) => {
|
|
7359
7382
|
const getTab = (view) => {
|
|
7360
7383
|
switch (view) {
|
|
7361
7384
|
case "table":
|
|
7362
7385
|
return {
|
|
7363
7386
|
title: "Table",
|
|
7364
|
-
content: /* @__PURE__ */ u$1(AggregateTable, { data, fields })
|
|
7387
|
+
content: /* @__PURE__ */ u$1(AggregateTable, { data, fields, pageSize })
|
|
7365
7388
|
};
|
|
7366
7389
|
}
|
|
7367
7390
|
};
|
|
@@ -7381,8 +7404,7 @@ var __decorateClass$4 = (decorators, target, key, kind) => {
|
|
|
7381
7404
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
7382
7405
|
if (decorator = decorators[i2])
|
|
7383
7406
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
7384
|
-
if (kind && result)
|
|
7385
|
-
__defProp$4(target, key, result);
|
|
7407
|
+
if (kind && result) __defProp$4(target, key, result);
|
|
7386
7408
|
return result;
|
|
7387
7409
|
};
|
|
7388
7410
|
let AggregateComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
@@ -7396,6 +7418,7 @@ let AggregateComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
|
7396
7418
|
this.headline = "Aggregate";
|
|
7397
7419
|
this.initialSortField = "count";
|
|
7398
7420
|
this.initialSortDirection = "descending";
|
|
7421
|
+
this.pageSize = false;
|
|
7399
7422
|
}
|
|
7400
7423
|
render() {
|
|
7401
7424
|
return /* @__PURE__ */ u$1(
|
|
@@ -7408,7 +7431,8 @@ let AggregateComponent = class extends PreactLitAdapterWithGridJsStyles {
|
|
|
7408
7431
|
height: this.height,
|
|
7409
7432
|
headline: this.headline,
|
|
7410
7433
|
initialSortField: this.initialSortField,
|
|
7411
|
-
initialSortDirection: this.initialSortDirection
|
|
7434
|
+
initialSortDirection: this.initialSortDirection,
|
|
7435
|
+
pageSize: this.pageSize
|
|
7412
7436
|
}
|
|
7413
7437
|
);
|
|
7414
7438
|
}
|
|
@@ -7437,6 +7461,9 @@ __decorateClass$4([
|
|
|
7437
7461
|
__decorateClass$4([
|
|
7438
7462
|
n2({ type: String })
|
|
7439
7463
|
], AggregateComponent.prototype, "initialSortDirection", 2);
|
|
7464
|
+
__decorateClass$4([
|
|
7465
|
+
n2({ type: Object })
|
|
7466
|
+
], AggregateComponent.prototype, "pageSize", 2);
|
|
7440
7467
|
AggregateComponent = __decorateClass$4([
|
|
7441
7468
|
t$2("gs-aggregate")
|
|
7442
7469
|
], AggregateComponent);
|
|
@@ -7724,8 +7751,7 @@ var __decorateClass$3 = (decorators, target, key, kind) => {
|
|
|
7724
7751
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
7725
7752
|
if (decorator = decorators[i2])
|
|
7726
7753
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
7727
|
-
if (kind && result)
|
|
7728
|
-
__defProp$3(target, key, result);
|
|
7754
|
+
if (kind && result) __defProp$3(target, key, result);
|
|
7729
7755
|
return result;
|
|
7730
7756
|
};
|
|
7731
7757
|
let DateRangeSelectorComponent = class extends PreactLitAdapter {
|
|
@@ -7821,11 +7847,16 @@ function compareLocationEntries(fields) {
|
|
|
7821
7847
|
return 0;
|
|
7822
7848
|
};
|
|
7823
7849
|
}
|
|
7824
|
-
const LocationFilter = ({
|
|
7850
|
+
const LocationFilter = ({
|
|
7851
|
+
width,
|
|
7852
|
+
initialValue,
|
|
7853
|
+
fields,
|
|
7854
|
+
placeholderText
|
|
7855
|
+
}) => {
|
|
7825
7856
|
const size2 = { width, height: "3rem" };
|
|
7826
|
-
return /* @__PURE__ */ u$1(ErrorBoundary, { size: size2, children: /* @__PURE__ */ u$1(ResizeContainer, { size: size2, children: /* @__PURE__ */ u$1(LocationFilterInner, { initialValue, fields }) }) });
|
|
7857
|
+
return /* @__PURE__ */ u$1(ErrorBoundary, { size: size2, children: /* @__PURE__ */ u$1(ResizeContainer, { size: size2, children: /* @__PURE__ */ u$1(LocationFilterInner, { initialValue, fields, placeholderText }) }) });
|
|
7827
7858
|
};
|
|
7828
|
-
const LocationFilterInner = ({ initialValue, fields }) => {
|
|
7859
|
+
const LocationFilterInner = ({ initialValue, fields, placeholderText }) => {
|
|
7829
7860
|
const lapis = P(LapisUrlContext);
|
|
7830
7861
|
const [value, setValue] = p(initialValue ?? "");
|
|
7831
7862
|
const [unknownLocation, setUnknownLocation] = p(false);
|
|
@@ -7866,7 +7897,8 @@ const LocationFilterInner = ({ initialValue, fields }) => {
|
|
|
7866
7897
|
class: `input input-bordered grow ${unknownLocation ? "border-2 border-error" : ""}`,
|
|
7867
7898
|
value,
|
|
7868
7899
|
onInput,
|
|
7869
|
-
list: "countries"
|
|
7900
|
+
list: "countries",
|
|
7901
|
+
placeholder: placeholderText
|
|
7870
7902
|
}
|
|
7871
7903
|
),
|
|
7872
7904
|
/* @__PURE__ */ u$1("datalist", { id: "countries", children: data == null ? void 0 : data.map((v2) => {
|
|
@@ -7897,8 +7929,7 @@ var __decorateClass$2 = (decorators, target, key, kind) => {
|
|
|
7897
7929
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
7898
7930
|
if (decorator = decorators[i2])
|
|
7899
7931
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
7900
|
-
if (kind && result)
|
|
7901
|
-
__defProp$2(target, key, result);
|
|
7932
|
+
if (kind && result) __defProp$2(target, key, result);
|
|
7902
7933
|
return result;
|
|
7903
7934
|
};
|
|
7904
7935
|
let LocationFilterComponent = class extends PreactLitAdapter {
|
|
@@ -7907,9 +7938,18 @@ let LocationFilterComponent = class extends PreactLitAdapter {
|
|
|
7907
7938
|
this.initialValue = "";
|
|
7908
7939
|
this.fields = [];
|
|
7909
7940
|
this.width = "100%";
|
|
7941
|
+
this.placeholderText = "";
|
|
7910
7942
|
}
|
|
7911
7943
|
render() {
|
|
7912
|
-
return /* @__PURE__ */ u$1(
|
|
7944
|
+
return /* @__PURE__ */ u$1(
|
|
7945
|
+
LocationFilter,
|
|
7946
|
+
{
|
|
7947
|
+
initialValue: this.initialValue,
|
|
7948
|
+
fields: this.fields,
|
|
7949
|
+
width: this.width,
|
|
7950
|
+
placeholderText: this.placeholderText
|
|
7951
|
+
}
|
|
7952
|
+
);
|
|
7913
7953
|
}
|
|
7914
7954
|
};
|
|
7915
7955
|
__decorateClass$2([
|
|
@@ -7921,6 +7961,9 @@ __decorateClass$2([
|
|
|
7921
7961
|
__decorateClass$2([
|
|
7922
7962
|
n2({ type: String })
|
|
7923
7963
|
], LocationFilterComponent.prototype, "width", 2);
|
|
7964
|
+
__decorateClass$2([
|
|
7965
|
+
n2()
|
|
7966
|
+
], LocationFilterComponent.prototype, "placeholderText", 2);
|
|
7924
7967
|
LocationFilterComponent = __decorateClass$2([
|
|
7925
7968
|
t$2("gs-location-filter")
|
|
7926
7969
|
], LocationFilterComponent);
|
|
@@ -7992,8 +8035,7 @@ var __decorateClass$1 = (decorators, target, key, kind) => {
|
|
|
7992
8035
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
7993
8036
|
if (decorator = decorators[i2])
|
|
7994
8037
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
7995
|
-
if (kind && result)
|
|
7996
|
-
__defProp$1(target, key, result);
|
|
8038
|
+
if (kind && result) __defProp$1(target, key, result);
|
|
7997
8039
|
return result;
|
|
7998
8040
|
};
|
|
7999
8041
|
let TextInputComponent = class extends PreactLitAdapter {
|
|
@@ -8359,8 +8401,7 @@ var __decorateClass = (decorators, target, key, kind) => {
|
|
|
8359
8401
|
for (var i2 = decorators.length - 1, decorator; i2 >= 0; i2--)
|
|
8360
8402
|
if (decorator = decorators[i2])
|
|
8361
8403
|
result = (kind ? decorator(target, key, result) : decorator(result)) || result;
|
|
8362
|
-
if (kind && result)
|
|
8363
|
-
__defProp(target, key, result);
|
|
8404
|
+
if (kind && result) __defProp(target, key, result);
|
|
8364
8405
|
return result;
|
|
8365
8406
|
};
|
|
8366
8407
|
let MutationFilterComponent = class extends PreactLitAdapter {
|