@genspectrum/dashboard-components 0.19.2 → 0.19.3

package/dist/components.d.ts

@@ -233,6 +233,36 @@ declare class ErrorEvent_2 extends Event {
 }
 export { ErrorEvent_2 as ErrorEvent }
 
+/**
+ * ## Context
+ *
+ * This component shows the Coding Sequence (CDS) of a genome using a gff3 file as input.
+ * The CDS shows which parts of the genome are translated into proteins.
+ *
+ */
+export declare class GenomeDataViewerComponent extends PreactLitAdapter {
+    /**
+     * Required
+     *
+     * The source of the gff3 file. Any spec-compliant gff3 should be accepted, however we use the same format as Nextclade.
+     * See https://docs.nextstrain.org/projects/nextclade/en/stable/user/input-files/03-genome-annotation.html for more information.
+     * We only use the CDS and gene features from the gff3 file, if you have other features in the gff3 file they will be ignored.
+     * Also note that if a CDS has a gene feature as a parent, the gene feature will be ignored.
+     */
+    gff3Source: string;
+    /**
+     * The length of the genome, if this is not given it will be computed from the `sequence-region` line of the start of the gff3 file.
+     */
+    genomeLength: number | undefined;
+    /**
+     * The width of the component.
+     *
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
+     */
+    width: string;
+    render(): JSX_2.Element;
+}
+
 /**
  *
  * ## Context
@@ -1402,7 +1432,7 @@ export { }
 
 declare global {
     interface HTMLElementEventMap {
-        'gs-error': ErrorEvent;
+        [gsEventNames.error]: ErrorEvent;
     }
 }
 
@@ -1423,6 +1453,22 @@ declare global {
 }
 
 
+declare global {
+    interface HTMLElementTagNameMap {
+        'gs-genome-data-viewer': GenomeDataViewerComponent;
+    }
+}
+
+
+declare global {
+    namespace JSX {
+        interface IntrinsicElements {
+            'gs-genome-data-viewer': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+        }
+    }
+}
+
+
 declare global {
     interface HTMLElementTagNameMap {
         'gs-mutation-comparison-component': MutationComparisonComponent;
@@ -1457,7 +1503,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
+        'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
     }
 }
 
@@ -1465,7 +1511,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1473,7 +1519,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
+        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
     }
 }
 
@@ -1481,7 +1527,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1489,7 +1535,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-aggregate': AggregateComponent;
+        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
     }
 }
 
@@ -1497,7 +1543,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1505,7 +1551,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
+        'gs-aggregate': AggregateComponent;
     }
 }
 
@@ -1513,7 +1559,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1537,7 +1583,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-sequences-by-location': SequencesByLocationComponent;
+        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
     }
 }
 
@@ -1545,7 +1591,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1553,7 +1599,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-statistics': StatisticsComponent;
+        'gs-sequences-by-location': SequencesByLocationComponent;
     }
 }
 
@@ -1561,7 +1607,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1569,7 +1615,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
+        'gs-statistics': StatisticsComponent;
     }
 }
 
@@ -1577,7 +1623,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1585,10 +1631,11 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-location-filter': LocationFilterComponent;
+        'gs-date-range-filter': DateRangeFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-location-changed': LocationChangedEvent;
+        [gsEventNames.dateRangeFilterChanged]: CustomEvent<Record<string, string>>;
+        [gsEventNames.dateRangeOptionChanged]: DateRangeOptionChangedEvent;
     }
 }
 
@@ -1596,7 +1643,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-date-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1604,11 +1651,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-date-range-filter': DateRangeFilterComponent;
+        'gs-location-filter': LocationFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-date-range-filter-changed': CustomEvent<Record<string, string>>;
-        'gs-date-range-option-changed': DateRangeOptionChangedEvent;
+        [gsEventNames.locationChanged]: LocationChangedEvent;
     }
 }
 
@@ -1616,7 +1662,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-date-range-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1627,7 +1673,7 @@ declare global {
         'gs-text-filter': TextFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-text-filter-changed': TextFilterChangedEvent;
+        [gsEventNames.textFilterChanged]: TextFilterChangedEvent;
     }
 }
 
@@ -1646,7 +1692,7 @@ declare global {
         'gs-mutation-filter': MutationFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-mutation-filter-changed': CustomEvent<MutationsFilter>;
+        [gsEventNames.mutationFilterChanged]: CustomEvent<MutationsFilter>;
     }
 }
 
@@ -1665,7 +1711,7 @@ declare global {
         'gs-lineage-filter': LineageFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-lineage-filter-changed': LineageFilterChangedEvent;
+        [gsEventNames.lineageFilterChanged]: LineageFilterChangedEvent;
     }
 }