@genspectrum/dashboard-components 0.16.4 → 0.17.0

package/dist/LineageFilterChangedEvent-DkvWdq_G.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"LineageFilterChangedEvent-DkvWdq_G.js","sources":["../src/types.ts","../src/preact/dateRangeFilter/dateConversion.ts","../src/preact/dateRangeFilter/dateRangeOption.ts","../src/preact/locationFilter/LocationChangedEvent.ts","../src/preact/textFilter/TextFilterChangedEvent.ts","../src/preact/lineageFilter/LineageFilterChangedEvent.ts"],"sourcesContent":["import z from 'zod';\n\nimport {\n    type Deletion,\n    type DeletionClass,\n    type Insertion,\n    type InsertionClass,\n    type Substitution,\n    type SubstitutionClass,\n} from './utils/mutations';\n\nexport const mutationsFilterSchema = z.object({\n    nucleotideMutations: z.array(z.string()),\n    aminoAcidMutations: z.array(z.string()),\n    nucleotideInsertions: z.array(z.string()),\n    aminoAcidInsertions: z.array(z.string()),\n});\nexport type MutationsFilter = z.infer<typeof mutationsFilterSchema>;\n\nexport const lapisFilterSchema = z\n    .record(z.union([z.string(), z.array(z.string()), z.number(), z.null(), z.boolean(), z.undefined()]))\n    .and(mutationsFilterSchema.partial());\nexport type LapisFilter = z.infer<typeof lapisFilterSchema>;\n\nexport const namedLapisFilterSchema = z.object({\n    lapisFilter: lapisFilterSchema,\n    displayName: z.string(),\n});\nexport type NamedLapisFilter = z.infer<typeof namedLapisFilterSchema>;\n\nexport const lapisLocationFilterSchema = z.record(z.union([z.string(), z.undefined()]));\nexport type LapisLocationFilter = z.infer<typeof lapisLocationFilterSchema>;\n\nexport const temporalGranularitySchema = z.union([\n    z.literal('day'),\n    z.literal('week'),\n    z.literal('month'),\n    z.literal('year'),\n]);\nexport type TemporalGranularity = z.infer<typeof temporalGranularitySchema>;\n\nexport const sequenceTypeSchema = z.union([z.literal('nucleotide'), z.literal('amino acid')]);\nexport type SequenceType = z.infer<typeof sequenceTypeSchema>;\n\nexport type SubstitutionOrDeletion = 'substitution' | 'deletion';\n\nexport type MutationType = SubstitutionOrDeletion | 'insertion';\n\nexport type SubstitutionEntry<T extends Substitution = SubstitutionClass> = {\n    type: 'substitution';\n    mutation: T;\n    count: number;\n    proportion: number;\n};\n\nexport type DeletionEntry<T extends Deletion = DeletionClass> = {\n    type: 'deletion';\n    mutation: T;\n    count: number;\n    proportion: number;\n};\n\nexport type InsertionEntry<T extends Insertion = InsertionClass> = { type: 'insertion'; mutation: T; count: number };\n\nexport type SubstitutionOrDeletionEntry<\n    S extends Substitution = SubstitutionClass,\n    D extends Deletion = DeletionClass,\n> = SubstitutionEntry<S> | DeletionEntry<D>;\n\nexport type MutationEntry = SubstitutionEntry | DeletionEntry | InsertionEntry;\n\nexport const views = {\n    table: 'table',\n    venn: 'venn',\n    grid: 'grid',\n    insertions: 'insertions',\n    bar: 'bar',\n    line: 'line',\n    bubble: 'bubble',\n    map: 'map',\n} as const;\n","export const toYYYYMMDD = (date: Date) => {\n    const options: Intl.DateTimeFormatOptions = { year: 'numeric', month: '2-digit', day: '2-digit' };\n    return date.toLocaleDateString('en-CA', options);\n};\n","import z from 'zod';\n\nimport { toYYYYMMDD } from './dateConversion';\n\n/**\n * A date range option that can be used in the `gs-date-range-filter` component.\n */\nexport const dateRangeOptionSchema = z.object({\n    /** The label of the date range option that will be shown to the user */\n    label: z.string(),\n    /**\n     * The start date of the date range in the format `YYYY-MM-DD`.\n     * If not set, the date range selector will default to the `earliestDate` property.\n     */\n    dateFrom: z.string().date().optional(),\n    /**\n     * The end date of the date range in the format `YYYY-MM-DD`.\n     * If not set, the date range selector will default to the current date.\n     */\n    dateTo: z.string().date().optional(),\n});\n\nexport type DateRangeOption = z.infer<typeof dateRangeOptionSchema>;\n\nexport const dateRangeValueSchema = z\n    .union([\n        z.string(),\n        z.object({\n            dateFrom: z.string().date().optional(),\n            dateTo: z.string().date().optional(),\n        }),\n    ])\n    .optional();\n\nexport type DateRangeValue = z.infer<typeof dateRangeValueSchema>;\n\nexport class DateRangeOptionChangedEvent extends CustomEvent<DateRangeValue> {\n    constructor(detail: DateRangeValue) {\n        super('gs-date-range-option-changed', {\n            detail,\n            bubbles: true,\n            composed: true,\n        });\n    }\n}\n\nconst today = new Date();\n\nconst twoWeeksAgo = new Date();\ntwoWeeksAgo.setDate(today.getDate() - 14);\n\nconst lastMonth = new Date(today);\nlastMonth.setMonth(today.getMonth() - 1);\n\nconst last2Months = new Date(today);\nlast2Months.setMonth(today.getMonth() - 2);\n\nconst last3Months = new Date(today);\nlast3Months.setMonth(today.getMonth() - 3);\n\nconst last6Months = new Date(today);\nlast6Months.setMonth(today.getMonth() - 6);\n\nconst lastYear = new Date(today);\nlastYear.setFullYear(today.getFullYear() - 1);\n\n/**\n * Presets for the `gs-date-range-filter` component that can be used as `dateRangeOptions`.\n */\nexport const dateRangeOptionPresets = {\n    last2Weeks: {\n        label: 'Last 2 weeks',\n        dateFrom: toYYYYMMDD(twoWeeksAgo),\n    },\n    lastMonth: {\n        label: 'Last month',\n        dateFrom: toYYYYMMDD(lastMonth),\n    },\n    last2Months: {\n        label: 'Last 2 months',\n        dateFrom: toYYYYMMDD(last2Months),\n    },\n    last3Months: {\n        label: 'Last 3 months',\n        dateFrom: toYYYYMMDD(last3Months),\n    },\n    last6Months: {\n        label: 'Last 6 months',\n        dateFrom: toYYYYMMDD(last6Months),\n    },\n    lastYear: {\n        label: 'Last year',\n        dateFrom: toYYYYMMDD(lastYear),\n    },\n    allTimes: {\n        label: 'All times',\n    },\n} satisfies Record<string, DateRangeOption>;\n","import { type LapisLocationFilter } from '../../types';\n\nexport class LocationChangedEvent extends CustomEvent<LapisLocationFilter> {\n    constructor(detail: LapisLocationFilter) {\n        super('gs-location-changed', {\n            detail,\n            bubbles: true,\n            composed: true,\n        });\n    }\n}\n","type LapisTextFilter = Record<string, string | undefined>;\n\nexport class TextFilterChangedEvent extends CustomEvent<LapisTextFilter> {\n    constructor(detail: LapisTextFilter) {\n        super('gs-text-filter-changed', {\n            detail,\n            bubbles: true,\n            composed: true,\n        });\n    }\n}\n","type LapisLineageFilter = Record<string, string | undefined>;\n\nexport class LineageFilterChangedEvent extends CustomEvent<LapisLineageFilter> {\n    constructor(detail: LapisLineageFilter) {\n        super('gs-lineage-filter-changed', {\n            detail,\n            bubbles: true,\n            composed: true,\n        });\n    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package/dist/components.d.ts

@@ -59,13 +59,13 @@ export declare class AggregateComponent extends PreactLitAdapterWithGridJsStyles
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -115,8 +115,8 @@ export declare class AppComponent extends LitElement {
     lapis: string;
     /**
      * Supply lists of mutations that are especially relevant for the current organism.
-     * Whenever other components display mutations, matching mutations will be highlighted by appending the `symbol`.
-     * On hover, a tooltip with the `name` and `description` will be shown.
+     *
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-mutation-annotations--docs for more information.
      */
     mutationAnnotations: {
         name: string;
@@ -197,7 +197,6 @@ export declare class DateRangeFilterComponent extends PreactLitAdapter {
      * - If it is a string, then it must be a valid label from the `dateRangeOptions`.
      * - If it is an object, then it accepts dates in the format `YYYY-MM-DD` for the keys `dateFrom` and `dateTo`.
      *   Keys that are not set will default to the `earliestDate` or the current date respectively.
-     * - If the attribute is not set, the component will default to the range `earliestDate` until today.
      *
      * The `detail` of the `gs-date-range-option-changed` event can be used for this attribute,
      * if you want to control this component in your JS application.
@@ -209,9 +208,13 @@ export declare class DateRangeFilterComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
+    /**
+     * The placeholder to display on the select dropdown.
+     */
+    placeholder: string | undefined;
     /**
      * The name of the metadata field in LAPIS that contains the date information.
      */
@@ -277,7 +280,7 @@ export declare class LineageFilterComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     render(): JSX_2.Element;
@@ -335,7 +338,7 @@ export declare class LocationFilterComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
@@ -375,6 +378,9 @@ declare const mutationAnnotationsSchema: default_2.ZodArray<default_2.ZodObject<
  *
  * It only shows substitutions and deletions, it does not show insertions.
  *
+ * This component supports mutations annotations.
+ * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-mutation-annotations--docs for more information.
+ *
  * ## Views
  *
  * ### Table View
@@ -423,13 +429,13 @@ export declare class MutationComparisonComponent extends PreactLitAdapterWithGri
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -501,7 +507,7 @@ export declare class MutationFilterComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     render(): JSX_2.Element;
@@ -512,6 +518,9 @@ export declare class MutationFilterComponent extends PreactLitAdapter {
  *
  * This component displays mutations (substitutions, deletions and insertions) for a dataset selected by a LAPIS filter.
  *
+ * This component supports mutations annotations.
+ * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-mutation-annotations--docs for more information.
+ *
  * ## Views
  *
  * ### Table View
@@ -589,13 +598,13 @@ export declare class MutationsComponent extends PreactLitAdapterWithGridJsStyles
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -614,6 +623,9 @@ export declare class MutationsComponent extends PreactLitAdapterWithGridJsStyles
  * The shown date range is determined by the date field in the LAPIS filter.
  * If the date field is not set, the date range is determined by all available dates in the dataset.
  *
+ * This component supports mutations annotations.
+ * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-mutation-annotations--docs for more information.
+ *
  * ## Views
  *
  * ### Grid View
@@ -657,13 +669,13 @@ export declare class MutationsOverTimeComponent extends PreactLitAdapterWithGrid
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -741,13 +753,13 @@ export declare class NumberSequencesOverTimeComponent extends PreactLitAdapterWi
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -878,13 +890,13 @@ export declare class PrevalenceOverTimeComponent extends PreactLitAdapterWithGri
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -1021,13 +1033,13 @@ export declare class RelativeGrowthAdvantageComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -1177,13 +1189,13 @@ export declare class SequencesByLocationComponent extends PreactLitAdapterWithGr
      * Not that the map in the map view is not responsive
      * (i.e. does not adjust its size when the component is resized).
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -1245,13 +1257,13 @@ export declare class StatisticsComponent extends PreactLitAdapterWithGridJsStyle
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     render(): JSX_2.Element;
@@ -1303,7 +1315,7 @@ export declare class TextFilterComponent extends PreactLitAdapter {
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     render(): JSX_2.Element;
@@ -1353,13 +1365,13 @@ export declare class WastewaterMutationsOverTimeComponent extends PreactLitAdapt
     /**
      * The width of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     width: string;
     /**
      * The height of the component.
      *
-     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/concepts-size-of-components--docs for more information.
      */
     height: string | undefined;
     /**
@@ -1616,10 +1628,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-lineage-filter': LineageFilterComponent;
+        'gs-mutation-filter': MutationFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-lineage-filter-changed': LineageFilterChangedEvent;
+        'gs-mutation-filter-changed': CustomEvent<MutationsFilter>;
     }
 }
 
@@ -1627,7 +1639,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1635,10 +1647,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutation-filter': MutationFilterComponent;
+        'gs-lineage-filter': LineageFilterComponent;
     }
     interface HTMLElementEventMap {
-        'gs-mutation-filter-changed': CustomEvent<MutationsFilter>;
+        'gs-lineage-filter-changed': LineageFilterChangedEvent;
     }
 }
 
@@ -1646,7 +1658,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }