@genspectrum/dashboard-components 0.13.0 → 0.13.2

package/dist/components.d.ts

@@ -1269,6 +1269,55 @@ export declare class UserFacingError extends Error {
     constructor(headline: string, message: string);
 }
 
+/**
+ * ## Context
+ *
+ * This component displays mutations for Swiss wastewater data generated within the WISE consortium. It is designed
+ * only for this purpose and is not designed to be reused outside the WISE project.
+ *
+ * It relies on a LAPIS instance that has the fields `nucleotideMutationFrequency` and `aminoAcidMutationFrequency`.
+ * Those fields are expected to be JSON strings of the format `{ [mutation]: frequency | null }`
+ * (e.g. `{ "A123T": 0.5, "C456G": 0.7, "T789G": null }`).
+ *
+ * The component will stratify by `location`.
+ * Every location will be rendered in a separate tab.
+ * The content of the tab is a "mutations over time" grid, similar to the one used in the `gs-mutations-over-time` component.
+ *
+ * This component also assumes that the LAPIS instance has the field `date` which can be used for the time axis.
+ */
+export declare class WastewaterMutationsOverTimeComponent extends PreactLitAdapterWithGridJsStyles {
+    /**
+     * Required.
+     *
+     * LAPIS filter to select the displayed data.
+     */
+    lapisFilter: Record<string, string | string[] | number | null | boolean | undefined> & {
+        nucleotideMutations?: string[];
+        aminoAcidMutations?: string[];
+        nucleotideInsertions?: string[];
+        aminoAcidInsertions?: string[];
+    };
+    /**
+     * Required.
+     *
+     * Whether to display nucleotide or amino acid mutations.
+     */
+    sequenceType: 'nucleotide' | 'amino acid';
+    /**
+     * The width of the component.
+     *
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     */
+    width: string;
+    /**
+     * The height of the component.
+     *
+     * Visit https://genspectrum.github.io/dashboard-components/?path=/docs/components-size-of-components--docs for more information.
+     */
+    height: string;
+    render(): JSX_2.Element;
+}
+
 export { }
 
 
@@ -1297,7 +1346,11 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutation-comparison-component': MutationComparisonComponent;
+        'gs-date-range-selector': DateRangeSelectorComponent;
+    }
+    interface HTMLElementEventMap {
+        'gs-date-range-filter-changed': CustomEvent<Record<string, string>>;
+        'gs-date-range-option-changed': DateRangeOptionChangedEvent;
     }
 }
 
@@ -1305,7 +1358,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutation-comparison-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-date-range-selector': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1313,7 +1366,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutations-component': MutationsComponent;
+        'gs-location-filter': LocationFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        'gs-location-changed': LocationChangedEvent;
     }
 }
 
@@ -1321,7 +1377,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutations-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1329,7 +1385,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
+        'gs-text-input': TextInputComponent;
+    }
+    interface HTMLElementEventMap {
+        'gs-text-input-changed': TextInputChangedEvent;
     }
 }
 
@@ -1337,7 +1396,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-text-input': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1345,7 +1404,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
+        'gs-mutation-filter': MutationFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        'gs-mutation-filter-changed': CustomEvent<MutationsFilter>;
     }
 }
 
@@ -1353,7 +1415,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1361,7 +1423,10 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-aggregate': AggregateComponent;
+        'gs-lineage-filter': LineageFilterComponent;
+    }
+    interface HTMLElementEventMap {
+        'gs-lineage-filter-changed': LineageFilterChangedEvent;
     }
 }
 
@@ -1369,7 +1434,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1377,7 +1442,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
+        'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
     }
 }
 
@@ -1385,7 +1450,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1393,7 +1458,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutations-over-time': MutationsOverTimeComponent;
+        'gs-mutation-comparison-component': MutationComparisonComponent;
     }
 }
 
@@ -1401,7 +1466,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutation-comparison-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1409,7 +1474,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-sequences-by-location': SequencesByLocationComponent;
+        'gs-mutations-component': MutationsComponent;
     }
 }
 
@@ -1417,7 +1482,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutations-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1425,7 +1490,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-statistics': StatisticsComponent;
+        'gs-prevalence-over-time': PrevalenceOverTimeComponent;
     }
 }
 
@@ -1433,7 +1498,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1441,11 +1506,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-date-range-selector': DateRangeSelectorComponent;
-    }
-    interface HTMLElementEventMap {
-        'gs-date-range-filter-changed': CustomEvent<Record<string, string>>;
-        'gs-date-range-option-changed': DateRangeOptionChangedEvent;
+        'gs-relative-growth-advantage': RelativeGrowthAdvantageComponent;
     }
 }
 
@@ -1453,7 +1514,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-date-range-selector': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-relative-growth-advantage': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1461,10 +1522,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-location-filter': LocationFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        'gs-location-changed': LocationChangedEvent;
+        'gs-number-sequences-over-time': NumberSequencesOverTimeComponent;
     }
 }
 
@@ -1472,7 +1530,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-location-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-number-sequences-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1480,10 +1538,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-text-input': TextInputComponent;
-    }
-    interface HTMLElementEventMap {
-        'gs-text-input-changed': TextInputChangedEvent;
+        'gs-aggregate': AggregateComponent;
     }
 }
 
@@ -1491,7 +1546,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-text-input': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-aggregate': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1499,10 +1554,7 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-mutation-filter': MutationFilterComponent;
-    }
-    interface HTMLElementEventMap {
-        'gs-mutation-filter-changed': CustomEvent<MutationsFilter>;
+        'gs-mutations-over-time': MutationsOverTimeComponent;
     }
 }
 
@@ -1510,7 +1562,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-mutation-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }
@@ -1518,10 +1570,23 @@ declare global {
 
 declare global {
     interface HTMLElementTagNameMap {
-        'gs-lineage-filter': LineageFilterComponent;
+        'gs-sequences-by-location': SequencesByLocationComponent;
     }
-    interface HTMLElementEventMap {
-        'gs-lineage-filter-changed': LineageFilterChangedEvent;
+}
+
+
+declare global {
+    namespace JSX {
+        interface IntrinsicElements {
+            'gs-sequences-by-location': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+        }
+    }
+}
+
+
+declare global {
+    interface HTMLElementTagNameMap {
+        'gs-statistics': StatisticsComponent;
     }
 }
 
@@ -1529,7 +1594,7 @@ declare global {
 declare global {
     namespace JSX {
         interface IntrinsicElements {
-            'gs-lineage-filter': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
+            'gs-statistics': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
         }
     }
 }