@genome-spy/core 0.53.1 → 0.55.0

package/dist/bundle/{long-D4tVjLLz.js → long-BXK3UEks.js}

@@ -1,5 +1,5 @@
-import { b as Pi } from "./index-B5cesONJ.js";
-import { g as Da } from "./_commonjsHelpers-BIiJCwQW.js";
+import { b as Pi } from "./index-B6haPltu.js";
+import { g as Da } from "./_commonjsHelpers-DSebQMb9.js";
 var re = {};
 (function(e) {
   var i = typeof Uint8Array < "u" && typeof Uint16Array < "u" && typeof Int32Array < "u";
@@ -248,8 +248,7 @@ function ti(e, i, t) {
         do
           ee(e, n, e.bl_tree);
         while (--f !== 0);
-      else
-        n !== 0 ? (n !== r && (ee(e, n, e.bl_tree), f--), ee(e, Xi, e.bl_tree), C(e, f - 3, 2)) : f <= 10 ? (ee(e, qi, e.bl_tree), C(e, f - 3, 3)) : (ee(e, Gi, e.bl_tree), C(e, f - 11, 7));
+      else n !== 0 ? (n !== r && (ee(e, n, e.bl_tree), f--), ee(e, Xi, e.bl_tree), C(e, f - 3, 2)) : f <= 10 ? (ee(e, qi, e.bl_tree), C(e, f - 3, 3)) : (ee(e, Gi, e.bl_tree), C(e, f - 11, 7));
       f = 0, r = n, h === 0 ? (_ = 138, l = 3) : n === h ? (_ = 6, l = 3) : (_ = 7, l = 4);
     }
 }
@@ -726,8 +725,7 @@ function $n() {
 }
 var va = $n, Ce = ie, Ue = re, Dt = Ee, Rt = Kt, Mn = va, ga = Object.prototype.toString, Hn = 0, yt = 4, ze = 0, fi = 1, hi = 2, Pn = -1, Kn = 0, Yn = 8;
 function be(e) {
-  if (!(this instanceof be))
-    return new be(e);
+  if (!(this instanceof be)) return new be(e);
   this.options = Ue.assign({
     level: Pn,
     method: Yn,
@@ -1183,8 +1181,7 @@ function vr(e, i) {
               f--, l += a[n++] << o, o += 8;
             }
             t.length = l, t.head && (t.head.extra_len = l), t.flags & 512 && (m[0] = l & 255, m[1] = l >>> 8 & 255, t.check = Q(t.check, m, 2, 0)), l = 0, o = 0;
-          } else
-            t.head && (t.head.extra = null);
+          } else t.head && (t.head.extra = null);
           t.mode = pi;
         case pi:
           if (t.flags & 1024 && (u = t.length, u > f && (u = f), u && (t.head && (y = t.head.extra_len - t.length, t.head.extra || (t.head.extra = new Array(t.head.extra_len)), M.arraySet(
@@ -1209,8 +1206,7 @@ function vr(e, i) {
             while (y && u < f);
             if (t.flags & 512 && (t.check = Q(t.check, a, u, n)), f -= u, n += u, y)
               break e;
-          } else
-            t.head && (t.head.name = null);
+          } else t.head && (t.head.name = null);
           t.length = 0, t.mode = ki;
         case ki:
           if (t.flags & 4096) {
@@ -1222,8 +1218,7 @@ function vr(e, i) {
             while (y && u < f);
             if (t.flags & 512 && (t.check = Q(t.check, a, u, n)), f -= u, n += u, y)
               break e;
-          } else
-            t.head && (t.head.comment = null);
+          } else t.head && (t.head.comment = null);
           t.mode = Ei;
         case Ei:
           if (t.flags & 512) {
@@ -1603,8 +1598,7 @@ function pr() {
 }
 var xr = pr, Ae = j, Me = re, _t = Ee, L = Na, Ct = Kt, kr = va, Er = xr, za = Object.prototype.toString;
 function xe(e) {
-  if (!(this instanceof xe))
-    return new xe(e);
+  if (!(this instanceof xe)) return new xe(e);
   this.options = Me.assign({
     chunkSize: 16384,
     windowBits: 0,
@@ -2317,8 +2311,7 @@ s.shiftRightUnsigned = function(i) {
   if (i < 32) {
     var a = this.low;
     return O(a >>> i | t << 32 - i, t >>> i, this.unsigned);
-  } else
-    return i === 32 ? O(t, 0, this.unsigned) : O(t >>> i - 32, 0, this.unsigned);
+  } else return i === 32 ? O(t, 0, this.unsigned) : O(t >>> i - 32, 0, this.unsigned);
 };
 s.shru = s.shiftRightUnsigned;
 s.shr_u = s.shiftRightUnsigned;

package/dist/bundle/{remoteFile-BkTxwFub.js → remoteFile-DuIsnepi.js}

@@ -1,4 +1,4 @@
-import { b as d } from "./index-B5cesONJ.js";
+import { b as d } from "./index-B6haPltu.js";
 class b {
   async getBufferFromResponse(e) {
     const t = await e.arrayBuffer();

package/dist/schema.json

@@ -2,16 +2,50 @@
   "$ref": "#/definitions/RootSpec",
   "$schema": "http://json-schema.org/draft-07/schema#",
   "definitions": {
+    "AggregateOp": {
+      "enum": [
+        "count",
+        "valid",
+        "sum",
+        "min",
+        "max",
+        "mean",
+        "median",
+        "variance"
+      ],
+      "type": "string"
+    },
     "AggregateParams": {
       "additionalProperties": false,
       "properties": {
+        "as": {
+          "description": "The names for the output fields corresponding to each aggregated field. If not provided, names will be automatically created using the operation and field names (e.g., `sum_field`, `average_field`).",
+          "items": {
+            "type": "string"
+          },
+          "type": "array"
+        },
+        "fields": {
+          "description": "The data fields to apply aggregate functions to. This array should correspond with the `ops` and `as` arrays. If no fields or operations are specified, a count aggregation will be applied by default.",
+          "items": {
+            "$ref": "#/definitions/Field"
+          },
+          "type": "array"
+        },
         "groupby": {
-          "description": "Which fields to use for grouping. Missing `groupby` results in a single group that includes all the data items.",
+          "description": "The fields by which to group the data. If these are not defined, all data objects will be grouped into a single category.",
           "items": {
             "$ref": "#/definitions/Field"
           },
           "type": "array"
         },
+        "ops": {
+          "description": "The aggregation operations to be performed on the fields, such as `\"sum\"`, `\"average\"`, or `\"count\"`.",
+          "items": {
+            "$ref": "#/definitions/AggregateOp"
+          },
+          "type": "array"
+        },
         "type": {
           "const": "aggregate",
           "description": "The type of the transform to be applied",
@@ -8020,7 +8054,7 @@
         },
         "orient": {
           "$ref": "#/definitions/TitleOrient",
-          "description": "Default title orientation (`\"top\"`, `\"bottom\"`, `\"left\"`, or `\"right\"`)"
+          "description": "Default title orientation (`\"none\"`, `\"top\"`, `\"bottom\"`, `\"left\"`, or `\"right\"`)"
         },
         "style": {
           "description": "A mark style property to apply to the title text mark. If not specified, a default style of `\"group-title\"` is applied.",

package/dist/src/data/collector.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"collector.d.ts","sourceRoot":"","sources":["../../../src/data/collector.js"],"names":[],"mappings":"AAUA;;;;;GAKG;AACH;IA8BI;;OAEG;IACH,qBAFW,OAAO,sBAAsB,EAAE,aAAa,EAetD;IAVG,qDAA2C;IAE3C,2CAA2C;IAC3C,WADW,QAAU,SAAS,KAAE,IAAI,CAAC,EAAE,CACpB;IAGnB,yFAAyF;IACzF,cADW,IAAI,OAAO,oBAAoB,EAAE,MAAM,EAAE,+BAAO,CACN;IAuHzD;;OAEG;IACH,mDAmBC;IAED;;;OAGG;IACH,6DAF6B,IAAI,QAUhC;IAED;;OAEG;IACH,uBAMC;IA8CD;;;;OAIG;IACH,8BAFW,MAAM,iCA4BhB;;CACJ;qBA3SyD,eAAe"}
+{"version":3,"file":"collector.d.ts","sourceRoot":"","sources":["../../../src/data/collector.js"],"names":[],"mappings":"AAUA;;;;;GAKG;AACH;IAkCI;;OAEG;IACH,qBAFW,OAAO,sBAAsB,EAAE,aAAa,EAetD;IAVG,qDAA2C;IAE3C,2CAA2C;IAC3C,WADW,QAAU,SAAS,KAAE,IAAI,CAAC,EAAE,CACpB;IAGnB,yFAAyF;IACzF,cADW,IAAI,OAAO,oBAAoB,EAAE,MAAM,EAAE,+BAAO,CACN;IAuHzD;;OAEG;IACH,mDAmBC;IAED;;;OAGG;IACH,6DAF6B,IAAI,QAUhC;IAED;;OAEG;IACH,uBAMC;IA8CD;;;;OAIG;IACH,8BAFW,MAAM,iCA4BhB;;CACJ;qBA/SyD,eAAe"}

package/dist/src/data/collector.js

@@ -44,6 +44,10 @@ export default class Collector extends FlowNode {
         return BEHAVIOR_COLLECTS;
     }
 
+    get label() {
+        return "collect";
+    }
+
     /**
      * @param {import("../spec/transform.js").CollectParams} [params]
      */

package/dist/src/data/flowNode.d.ts

@@ -37,14 +37,24 @@ export default class FlowNode {
      * @param {ParamMediatorProvider} [paramMediatorProvider]
      */
     constructor(paramMediatorProvider?: ParamMediatorProvider);
+    stats: {
+        count: number;
+        /** @type {Datum} */
+        first: Datum;
+    };
     /**
      * An object that provides a paramMediator. (Most likely a View)
      *
      * @type {ParamMediatorProvider}
-     * @protected
      */
-    protected paramMediatorProvider: ParamMediatorProvider;
+    paramMediatorProvider: ParamMediatorProvider;
     get behavior(): number;
+    /**
+     * A human-readable label for the node. Used for debugging and logging.
+     *
+     * @returns {string}
+     */
+    get label(): string;
     /** @type {FlowNode[]} */
     children: FlowNode[];
     /** @type {FlowNode} */
@@ -62,11 +72,10 @@ export default class FlowNode {
      */
     initialize(): void;
     /**
-     *
-     * @param {any} datum
+     * @param {Datum} datum
      * @protected
      */
-    protected _propagate(datum: any): void;
+    protected _propagate(datum: Datum): void;
     /**
      *
      * @param {FlowNode} parent

package/dist/src/data/flowNode.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"flowNode.d.ts","sourceRoot":"","sources":["../../../src/data/flowNode.js"],"names":[],"mappings":"AAgTA;;;GAGG;AACH,uCAHW,OAAO,uBAAuB,EAAE,SAAS,0DAKnD;AAED;;;GAGG;AACH,wCAHW,OAAO,uBAAuB,EAAE,SAAS,2DAKnD;AA5TD;;;GAGG;AACH,qCAAsC;AAEtC;;;GAGG;AACH,uCAAwC;AAExC;;;GAGG;AACH,uCAAwC;AAExC;;GAEG;AAEH;;;;;GAKG;AACH;IAaI;;OAEG;IACH,oCAFW,qBAAqB,EAa/B;IA1BD;;;;;OAKG;IACH,iCAHU,qBAAqB,CAGF;IAE7B,uBAEC;IAQG,yBAAyB;IACzB,UADW,QAAQ,EAAE,CACH;IAElB,uBAAuB;IACvB,QADW,QAAQ,CACI;IAEvB,2CAA2C;IAC3C,mBAAsB;IAG1B;;;OAGG;IACH,cAMC;IAED;;;OAGG;IACH,mBAEC;IAyND;;;;OAIG;IACH,4BAHW,GAAG,QAKb;IA9MD;;;OAGG;IACH,kBAFW,QAAQ,QAIlB;IAED;;;OAGG;IACH,gBAFW,QAAQ,QAUlB;IAED;;OAEG;IACH,YAFW,QAAQ,QAQlB;IAED;;OAEG;IACH,6BAFW,QAAQ,QAMlB;IAED;;OAEG;IACH,0BAFW,QAAQ,QAalB;IAED;;;OAGG;IACH,mBAFW,QAAQ,QAWlB;IAED;;OAEG;IACH,eAiBC;IAED,kBAEC;IAED,uBAEC;IAED,sBAEC;IAED;;;;OAIG;IACH,eAFW,QAAU,QAAQ,KAAE,IAAI,CAAC,GAAG;QAAE,aAAa,CAAC,SAAW,QAAQ,KAAE,IAAI,CAAA;KAAC,QAchF;IAED;;;OAGG;IACH,wBAHW,MAAM,GACJ,MAAM,CAWlB;IAED;;;OAGG;IACH,cAFW,KAAK,QAKf;IAED,iBAMC;IAED;;;;OAIG;IACH,sBAFW,OAAO,uBAAuB,EAAE,SAAS,QAMnD;IAED;;;OAGG;IACH,0EASC;IAED;;;;OAIG;IACH,8BAQC;;CAUJ;oCAzRY;IAAC,aAAa,EAAE,OAAO,0BAA0B,EAAE,OAAO,CAAA;CAAC;;;;oBAM3D,OAAO,MAAM,EAAE,GAAG,CAAC;;;;mBACnB,KAAK,EAAE"}
+{"version":3,"file":"flowNode.d.ts","sourceRoot":"","sources":["../../../src/data/flowNode.js"],"names":[],"mappings":"AAuUA;;;GAGG;AACH,uCAHW,OAAO,uBAAuB,EAAE,SAAS,0DAKnD;AAED;;;GAGG;AACH,wCAHW,OAAO,uBAAuB,EAAE,SAAS,2DAKnD;AAnVD;;;GAGG;AACH,qCAAsC;AAEtC;;;GAGG;AACH,uCAAwC;AAExC;;;GAGG;AACH,uCAAwC;AAExC;;GAEG;AAEH;;;;;GAKG;AACH;IA2BI;;OAEG;IACH,oCAFW,qBAAqB,EAa/B;IAxCD;;QAEI,oBAAoB;eAAT,KAAK;MAElB;IAEF;;;;OAIG;IACH,uBAFU,qBAAqB,CAEF;IAE7B,uBAEC;IAED;;;;OAIG;IACH,oBAEC;IAQG,yBAAyB;IACzB,UADW,QAAQ,EAAE,CACH;IAElB,uBAAuB;IACvB,QADW,QAAQ,CACI;IAEvB,2CAA2C;IAC3C,mBAAsB;IAG1B;;;OAGG;IACH,cASC;IAED;;;OAGG;IACH,mBAEC;IAgOD;;;OAGG;IACH,4BAHW,KAAK,QAKf;IA7MD;;;OAGG;IACH,kBAFW,QAAQ,QAIlB;IAED;;;OAGG;IACH,gBAFW,QAAQ,QAUlB;IAED;;OAEG;IACH,YAFW,QAAQ,QAQlB;IAED;;OAEG;IACH,6BAFW,QAAQ,QAMlB;IAED;;OAEG;IACH,0BAFW,QAAQ,QAalB;IAED;;;OAGG;IACH,mBAFW,QAAQ,QAWlB;IAED;;OAEG;IACH,eAiBC;IAED,kBAEC;IAED,uBAEC;IAED,sBAEC;IAED;;;;OAIG;IACH,eAFW,QAAU,QAAQ,KAAE,IAAI,CAAC,GAAG;QAAE,aAAa,CAAC,SAAW,QAAQ,KAAE,IAAI,CAAA;KAAC,QAchF;IAED;;;OAGG;IACH,wBAHW,MAAM,GACJ,MAAM,CAWlB;IAED;;;OAGG;IACH,cAFW,KAAK,QAKf;IAED,iBAMC;IAED;;;;OAIG;IACH,sBAFW,OAAO,uBAAuB,EAAE,SAAS,QAMnD;IAED;;;OAGG;IACH,0EASC;IAED;;;;OAIG;IACH,8BAQC;;CASJ;oCAhTY;IAAC,aAAa,EAAE,OAAO,0BAA0B,EAAE,OAAO,CAAA;CAAC;;;;oBAM3D,OAAO,MAAM,EAAE,GAAG,CAAC;;;;mBACnB,KAAK,EAAE"}

package/dist/src/data/flowNode.js

@@ -29,11 +29,16 @@ export const BEHAVIOR_COLLECTS = 1 << 2;
  * @typedef {Datum[]} Data
  */
 export default class FlowNode {
+    stats = {
+        count: 0,
+        /** @type {Datum} */
+        first: null,
+    };
+
     /**
      * An object that provides a paramMediator. (Most likely a View)
      *
      * @type {ParamMediatorProvider}
-     * @protected
      */
     paramMediatorProvider = null;
 
@@ -41,6 +46,15 @@ export default class FlowNode {
         return 0;
     }
 
+    /**
+     * A human-readable label for the node. Used for debugging and logging.
+     *
+     * @returns {string}
+     */
+    get label() {
+        return `(${this.constructor.name})`;
+    }
+
     /**
      * @param {ParamMediatorProvider} [paramMediatorProvider]
      */
@@ -67,6 +81,9 @@ export default class FlowNode {
         for (const child of this.children) {
             child.reset();
         }
+
+        this.stats.count = 0;
+        this.stats.first = null;
     }
 
     /**
@@ -84,13 +101,20 @@ export default class FlowNode {
     #updatePropagator() {
         this._propagate = Function(
             "children",
+            "stats",
             range(this.children.length)
                 .map((i) => `const child${i} = children[${i}];`)
                 .join("\n") +
-                `return function propagate(datum) {${range(this.children.length)
+                `return function propagate(datum) {
+                    if (stats.count === 0) {
+                        stats.first = structuredClone(datum);
+                    }
+                    stats.count++;
+                ${range(this.children.length)
                     .map((i) => `child${i}.handle(datum);`)
-                    .join("\n")}}`
-        )(this.children);
+                    .join("\n")}
+                };`
+        )(this.children, this.stats);
     }
 
     /**
@@ -227,7 +251,7 @@ export default class FlowNode {
         const childTree = this.children
             .map((child) => child.subtreeToString(depth + 1))
             .join("");
-        return `${" ".repeat(depth * 2)}* ${this.constructor.name}${
+        return `${" ".repeat(depth * 2)}* ${this.label}${
             ("identifier" in this && this.identifier
                 ? ": " + this.identifier
                 : "") ?? ""
@@ -293,8 +317,7 @@ export default class FlowNode {
     }
 
     /**
-     *
-     * @param {any} datum
+     * @param {Datum} datum
      * @protected
      */
     _propagate(datum) {

package/dist/src/data/sources/dataSource.d.ts

@@ -5,9 +5,8 @@ export default class DataSource extends FlowNode {
     constructor(view: import("../../view/view.js").default);
     /**
      * @type {import("../../view/view.js").default}
-     * @protected
      */
-    protected view: import("../../view/view.js").default;
+    view: import("../../view/view.js").default;
     /**
      * Returns a string that identifies a data source. Data sources with the
      * same identifier can be merged.

package/dist/src/data/sources/dataSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"dataSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/dataSource.js"],"names":[],"mappings":"AAEA;IAOI;;OAEG;IACH,kBAFW,OAAO,oBAAoB,EAAE,OAAO,EAM9C;IAbD;;;OAGG;IACH,gBAHU,OAAO,oBAAoB,EAAE,OAAO,CAGzC;IAWL;;;;;OAKG;IACH,yBAEC;IAED;;;;;;OAMG;IACH,mCAJW,OAAO,4BAA4B,EAAE,iBAAiB,WACtD,MAAM,QAKhB;IAcD,sBAEC;CAKJ;qBA1DoB,gBAAgB"}
+{"version":3,"file":"dataSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/dataSource.js"],"names":[],"mappings":"AAEA;IAMI;;OAEG;IACH,kBAFW,OAAO,oBAAoB,EAAE,OAAO,EAM9C;IAZD;;OAEG;IACH,MAFU,OAAO,oBAAoB,EAAE,OAAO,CAEzC;IAWL;;;;;OAKG;IACH,yBAEC;IAED;;;;;;OAMG;IACH,mCAJW,OAAO,4BAA4B,EAAE,iBAAiB,WACtD,MAAM,QAKhB;IAcD,sBAEC;CAKJ;qBAzDoB,gBAAgB"}

package/dist/src/data/sources/dataSource.js

@@ -3,7 +3,6 @@ import FlowNode from "../flowNode.js";
 export default class DataSource extends FlowNode {
     /**
      * @type {import("../../view/view.js").default}
-     * @protected
      */
     view;
 

package/dist/src/data/sources/inlineSource.d.ts

@@ -10,6 +10,10 @@ export default class InlineSource extends DataSource {
      */
     constructor(params: import("../../spec/data.js").InlineData, view: import("../../view/view.js").default);
     params: import("../../spec/data.js").InlineData;
+    /**
+     * Returns true if the data source emits a single dummy datum.
+     */
+    isTrivial(): boolean;
     loadSynchronously(): void;
 }
 import DataSource from "./dataSource.js";

package/dist/src/data/sources/inlineSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"inlineSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/inlineSource.js"],"names":[],"mappings":"AAIA;;;GAGG;AACH,mCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,mDAKpD;AAED;IACI;;;OAGG;IACH,oBAHW,OAAO,oBAAoB,EAAE,UAAU,QACvC,OAAO,oBAAoB,EAAE,OAAO,EAY9C;IAPG,gDAAoB;IASxB,0BAiCC;CAKJ;uBAjEsB,iBAAiB"}
+{"version":3,"file":"inlineSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/inlineSource.js"],"names":[],"mappings":"AAIA;;;GAGG;AACH,mCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,mDAKpD;AAED;IACI;;;OAGG;IACH,oBAHW,OAAO,oBAAoB,EAAE,UAAU,QACvC,OAAO,oBAAoB,EAAE,OAAO,EAY9C;IAPG,gDAAoB;IAaxB;;OAEG;IACH,qBASC;IAED,0BAiCC;CAKJ;uBAnFsB,iBAAiB"}

package/dist/src/data/sources/inlineSource.js

@@ -27,6 +27,24 @@ export default class InlineSource extends DataSource {
         }
     }
 
+    get label() {
+        return "inlineSource";
+    }
+
+    /**
+     * Returns true if the data source emits a single dummy datum.
+     */
+    isTrivial() {
+        const values = this.params.values;
+        /** @type {any} */
+        const value = Array.isArray(values) ? values[0] : values;
+        return !!(
+            value &&
+            Object.keys(value).length == 0 &&
+            value.constructor === Object
+        );
+    }
+
     loadSynchronously() {
         const values = this.params.values;
 

package/dist/src/data/sources/lazy/axisGenomeSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"axisGenomeSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/axisGenomeSource.js"],"names":[],"mappings":"AAEA;;;GAGG;AACH;IACI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,cAAc,QAC9C,OAAO,uBAAuB,EAAE,OAAO,EAIjD;CAKJ;iCAlBgC,2BAA2B"}
+{"version":3,"file":"axisGenomeSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/axisGenomeSource.js"],"names":[],"mappings":"AAEA;;;GAGG;AACH;IACI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,cAAc,QAC9C,OAAO,uBAAuB,EAAE,OAAO,EAIjD;CASJ;iCAtBgC,2BAA2B"}

package/dist/src/data/sources/lazy/axisGenomeSource.js

@@ -13,6 +13,10 @@ export default class AxisGenomeSource extends SingleAxisLazySource {
         super(view, params.channel);
     }
 
+    get label() {
+        return "axisGenomeSource";
+    }
+
     async load() {
         this.publishData([this.genome.chromosomes]);
     }

package/dist/src/data/sources/lazy/axisTickSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"axisTickSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/axisTickSource.js"],"names":[],"mappings":"AAYA;;GAEG;AACH;IAMI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,aAAa,QAC7C,OAAO,uBAAuB,EAAE,OAAO,EAYjD;IAnBD;;OAEG;IACH,OAFU,OAAO,0BAA0B,EAAE,MAAM,EAAE,CAE1C;IAeP,sDAAoB;IAUxB,wBAkCC;CACJ;iCArEgC,2BAA2B"}
+{"version":3,"file":"axisTickSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/axisTickSource.js"],"names":[],"mappings":"AAYA;;GAEG;AACH;IAMI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,aAAa,QAC7C,OAAO,uBAAuB,EAAE,OAAO,EAYjD;IAnBD;;OAEG;IACH,OAFU,OAAO,0BAA0B,EAAE,MAAM,EAAE,CAE1C;IAeP,sDAAoB;IAcxB,wBAkCC;CACJ;iCAzEgC,2BAA2B"}

package/dist/src/data/sources/lazy/axisTickSource.js

@@ -35,6 +35,10 @@ export default class AxisTickSource extends SingleAxisLazySource {
         this.params = params;
     }
 
+    get label() {
+        return "axisTickSource";
+    }
+
     async load() {
         // Force the ticks to be recalculated. This is needed because the async
         // initialization process and non-deterministic order of events.

package/dist/src/data/sources/lazy/bamSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"bamSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bamSource.js"],"names":[],"mappings":"AAGA;IAeI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,OAAO,QACvC,OAAO,uBAAuB,EAAE,OAAO,EAmDjD;IAhED;;;;;;;;OAQG;IACH,gBAFU,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,CAEH;IAkB1B,gDAAgC;IAQhC,iCA4BE;;CAmCT;qCAxGoC,+BAA+B"}
+{"version":3,"file":"bamSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bamSource.js"],"names":[],"mappings":"AAGA;IAeI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,OAAO,QACvC,OAAO,uBAAuB,EAAE,OAAO,EAmDjD;IAhED;;;;;;;;OAQG;IACH,gBAFU,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,CAEH;IAkB1B,gDAAgC;IAQhC,iCA4BE;;CAuCT;qCA5GoC,+BAA+B"}

package/dist/src/data/sources/lazy/bamSource.js

@@ -71,6 +71,10 @@ export default class BamSource extends SingleAxisWindowedSource {
         });
     }
 
+    get label() {
+        return "bamSource";
+    }
+
     /**
      * @param {number[]} interval linearized domain
      */

package/dist/src/data/sources/lazy/bigBedSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"bigBedSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bigBedSource.js"],"names":[],"mappings":"AAOA;IAUI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,UAAU,QAC1C,OAAO,uBAAuB,EAAE,OAAO,EAmCjD;IA9CD,0CAA0C;IAC1C,QADW,OAAO,WAAW,EAAE,OAAO,CAC/B;IAEP,yCAAyC;IACzC,KADW,OAAO,WAAW,EAAE,MAAM,CACjC;IAEJ,4GAA4G;IAC5G,WADW,CAAC,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,GAAG,EAAE,MAAM,CAAC;QAAC,IAAI,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,OAAO,MAAM,EAAE,GAAG,CAAC,CAC9F;IA8BN,mDAA6B;;CAoFpC;qCA5HoC,+BAA+B"}
+{"version":3,"file":"bigBedSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bigBedSource.js"],"names":[],"mappings":"AAOA;IAUI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,UAAU,QAC1C,OAAO,uBAAuB,EAAE,OAAO,EAmCjD;IA9CD,0CAA0C;IAC1C,QADW,OAAO,WAAW,EAAE,OAAO,CAC/B;IAEP,yCAAyC;IACzC,KADW,OAAO,WAAW,EAAE,MAAM,CACjC;IAEJ,4GAA4G;IAC5G,WADW,CAAC,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,GAAG,EAAE,MAAM,CAAC;QAAC,IAAI,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,OAAO,MAAM,EAAE,GAAG,CAAC,CAC9F;IA8BN,mDAA6B;;CAwFpC;qCAhIoC,+BAA+B"}

package/dist/src/data/sources/lazy/bigBedSource.js

@@ -54,6 +54,10 @@ export default class BigBedSource extends SingleAxisWindowedSource {
         this.#initialize();
     }
 
+    get label() {
+        return "bigBedSource";
+    }
+
     #initialize() {
         this.initializedPromise = new Promise((resolve, reject) => {
             Promise.all([

package/dist/src/data/sources/lazy/bigWigSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"bigWigSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bigWigSource.js"],"names":[],"mappings":"AAOA;;GAEG;AACH;IAOI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,UAAU,QAC1C,OAAO,uBAAuB,EAAE,OAAO,EAmCjD;IATG,mDAA6B;IA2DjC;;;;OAIG;IACH,wBAFW,MAAM,EAAE,iBAqBlB;IAED;;;OAGG;IAEH,uBAJW,MAAM,EAAE,kBACR,MAAM,iBA2BhB;;CACJ;qCA3JoC,+BAA+B"}
+{"version":3,"file":"bigWigSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/bigWigSource.js"],"names":[],"mappings":"AAOA;;GAEG;AACH;IAOI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,UAAU,QAC1C,OAAO,uBAAuB,EAAE,OAAO,EAmCjD;IATG,mDAA6B;IA+DjC;;;;OAIG;IACH,wBAFW,MAAM,EAAE,iBAqBlB;IAED;;;OAGG;IAEH,uBAJW,MAAM,EAAE,kBACR,MAAM,iBA2BhB;;CACJ;qCA/JoC,+BAA+B"}

package/dist/src/data/sources/lazy/bigWigSource.js

@@ -54,6 +54,10 @@ export default class BigWigSource extends SingleAxisWindowedSource {
         this.#initialize();
     }
 
+    get label() {
+        return "bigWigSource";
+    }
+
     #initialize() {
         this.initializedPromise = new Promise((resolve, reject) => {
             Promise.all([

package/dist/src/data/sources/lazy/gff3Source.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"gff3Source.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/gff3Source.js"],"names":[],"mappings":"AAEA;;GAEG;AACH;IAII;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,SAAS,QACzC,OAAO,uBAAuB,EAAE,OAAO,EASjD;IAED;;OAEG;IACH,sBAFW,MAAM,EAAE,OAUlB;;CACJ;wBAlCuB,kBAAkB"}
+{"version":3,"file":"gff3Source.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/gff3Source.js"],"names":[],"mappings":"AAEA;;GAEG;AACH;IAII;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,SAAS,QACzC,OAAO,uBAAuB,EAAE,OAAO,EASjD;IAMD;;OAEG;IACH,sBAFW,MAAM,EAAE,OAUlB;;CACJ;wBAtCuB,kBAAkB"}

package/dist/src/data/sources/lazy/gff3Source.js

@@ -20,6 +20,10 @@ export default class Gff3Source extends TabixSource {
         });
     }
 
+    get label() {
+        return "gff3Source";
+    }
+
     /**
      * @param {string[]} lines
      */

package/dist/src/data/sources/lazy/indexedFastaSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"indexedFastaSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/indexedFastaSource.js"],"names":[],"mappings":"AAGA;IACI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,gBAAgB,QAChD,OAAO,uBAAuB,EAAE,OAAO,EA+CjD;IAjCG,yDAAgC;IAQhC,iCAwBE;IATM,iDAKE;CA6BjB;qCA5EoC,+BAA+B"}
+{"version":3,"file":"indexedFastaSource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/indexedFastaSource.js"],"names":[],"mappings":"AAGA;IACI;;;OAGG;IACH,oBAHW,OAAO,uBAAuB,EAAE,gBAAgB,QAChD,OAAO,uBAAuB,EAAE,OAAO,EA+CjD;IAjCG,yDAAgC;IAQhC,iCAwBE;IATM,iDAKE;CAiCjB;qCAhFoC,+BAA+B"}

package/dist/src/data/sources/lazy/indexedFastaSource.js

@@ -53,6 +53,10 @@ export default class IndexedFastaSource extends SingleAxisWindowedSource {
         });
     }
 
+    get label() {
+        return "bigWigSource";
+    }
+
     /**
      * @param {number[]} interval linearized domain
      */

package/dist/src/data/sources/lazy/singleAxisLazySource.d.ts

@@ -1,5 +1,7 @@
 /**
  * Base class for data sources that listen a domain and propagate data lazily.
+ *
+ * @abstract
  */
 export default class SingleAxisLazySource extends DataSource {
     /**

package/dist/src/data/sources/lazy/singleAxisLazySource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"singleAxisLazySource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/singleAxisLazySource.js"],"names":[],"mappings":"AAIA;;GAEG;AACH;IAOI;;;OAGG;IACH,kBAHW,OAAO,uBAAuB,EAAE,OAAO,WACvC,OAAO,0BAA0B,EAAE,wBAAwB,EA+CrE;IAvDD;;;OAGG;IACH,4CAAuC;IAmBnC,2EAA2E;IAC3E,SADW,OAAO,0BAA0B,EAAE,wBAAwB,CAChD;IAEtB,oEAA4D;IA+BhE;;;;OAIG;IACH,oEAEC;IAED;;;;;;OAMG;IACH,wBAJW,MAAM,EAAE,iBACR,OAAO,yBAAyB,EAAE,gBAAgB,EAAE,QAK9D;IAED;;;;;OAKG;IACH,gCAGC;IAQD;;;;;;;;OAQG;IACH,8BAHW,OAAO,mBAAmB,EAAE,KAAK,EAAE,EAAE,QAgB/C;CACJ;uBA5HsB,kBAAkB"}
+{"version":3,"file":"singleAxisLazySource.d.ts","sourceRoot":"","sources":["../../../../../src/data/sources/lazy/singleAxisLazySource.js"],"names":[],"mappings":"AAIA;;;;GAIG;AACH;IAOI;;;OAGG;IACH,kBAHW,OAAO,uBAAuB,EAAE,OAAO,WACvC,OAAO,0BAA0B,EAAE,wBAAwB,EA+CrE;IAvDD;;;OAGG;IACH,4CAAuC;IAmBnC,2EAA2E;IAC3E,SADW,OAAO,0BAA0B,EAAE,wBAAwB,CAChD;IAEtB,oEAA4D;IA+BhE;;;;OAIG;IACH,oEAEC;IAED;;;;;;OAMG;IACH,wBAJW,MAAM,EAAE,iBACR,OAAO,yBAAyB,EAAE,gBAAgB,EAAE,QAK9D;IAED;;;;;OAKG;IACH,gCAGC;IAQD;;;;;;;;OAQG;IACH,8BAHW,OAAO,mBAAmB,EAAE,KAAK,EAAE,EAAE,QAgB/C;CACJ;uBA9HsB,kBAAkB"}

package/dist/src/data/sources/lazy/singleAxisLazySource.js

@@ -4,6 +4,8 @@ import { reconfigureScales } from "../../../view/scaleResolution.js";
 
 /**
  * Base class for data sources that listen a domain and propagate data lazily.
+ *
+ * @abstract
  */
 export default class SingleAxisLazySource extends DataSource {
     /**

package/dist/src/data/sources/namedSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"namedSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/namedSource.js"],"names":[],"mappings":"AAGA;;;GAGG;AACH,kCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,kDAKpD;AAED;IAOI;;;;OAIG;IACH,oBAJW,OAAO,oBAAoB,EAAE,SAAS,QACtC,OAAO,oBAAoB,EAAE,OAAO,mBAC3B,MAAM,KAAE,GAAG,EAAE,EAOhC;IAFG,iBALgB,MAAM,KAAE,GAAG,EAAE,CAKL;IACxB,+CAAoB;IAUxB;;;;OAIG;IACH,yBAFW,OAAO,gBAAgB,EAAE,KAAK,EAAE,QAM1C;IAED,0BA0BC;;CAKJ;uBA/EsB,iBAAiB"}
+{"version":3,"file":"namedSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/namedSource.js"],"names":[],"mappings":"AAGA;;;GAGG;AACH,kCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,kDAKpD;AAED;IAOI;;;;OAIG;IACH,oBAJW,OAAO,oBAAoB,EAAE,SAAS,QACtC,OAAO,oBAAoB,EAAE,OAAO,mBAC3B,MAAM,KAAE,GAAG,EAAE,EAOhC;IAFG,iBALgB,MAAM,KAAE,GAAG,EAAE,CAKL;IACxB,+CAAoB;IAcxB;;;;OAIG;IACH,yBAFW,OAAO,gBAAgB,EAAE,KAAK,EAAE,QAM1C;IAED,0BA0BC;;CAKJ;uBAnFsB,iBAAiB"}

package/dist/src/data/sources/namedSource.js

@@ -35,6 +35,10 @@ export default class NamedSource extends DataSource {
         return this.params.name;
     }
 
+    get label() {
+        return "namedSource";
+    }
+
     /**
      * Update the named data. If data is omitted, a data provider is used instead.
      *

package/dist/src/data/sources/sequenceSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"sequenceSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/sequenceSource.js"],"names":[],"mappings":"AAMA;;;GAGG;AACH,0CAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,0DAKpD;AAED;IACI;;;;OAIG;IACH,oBAHW,OAAO,oBAAoB,EAAE,iBAAiB,QAC9C,OAAO,oBAAoB,EAAE,OAAO,EAiB9C;IAZG,sDAIC;IAUL,0BAcC;CAKJ;uBApDsB,iBAAiB"}
+{"version":3,"file":"sequenceSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/sequenceSource.js"],"names":[],"mappings":"AAMA;;;GAGG;AACH,0CAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,0DAKpD;AAED;IACI;;;;OAIG;IACH,oBAHW,OAAO,oBAAoB,EAAE,iBAAiB,QAC9C,OAAO,oBAAoB,EAAE,OAAO,EAiB9C;IAZG,sDAIC;IAcL,0BAcC;CAKJ;uBAxDsB,iBAAiB"}

package/dist/src/data/sources/sequenceSource.js

@@ -35,6 +35,10 @@ export default class SequenceSource extends DataSource {
         }
     }
 
+    get label() {
+        return "sequenceSource";
+    }
+
     loadSynchronously() {
         const as = withoutExprRef(this.sequence.as) ?? "data";
         const start = withoutExprRef(this.sequence.start) ?? 0;

package/dist/src/data/sources/urlSource.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"urlSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/urlSource.js"],"names":[],"mappings":"AASA;;;GAGG;AACH,gCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,gDAKpD;AAED;IACI;;;OAGG;IACH,oBAHW,OAAO,oBAAoB,EAAE,OAAO,QACpC,OAAO,oBAAoB,EAAE,OAAO,EAU9C;IALG,6CAEC;IAED,gBAAiC;CAsExC;uBAjGsB,iBAAiB"}
+{"version":3,"file":"urlSource.d.ts","sourceRoot":"","sources":["../../../../src/data/sources/urlSource.js"],"names":[],"mappings":"AASA;;;GAGG;AACH,gCAHW,QAAQ,OAAO,oBAAoB,EAAE,IAAI,CAAC,gDAKpD;AAED;IACI;;;OAGG;IACH,oBAHW,OAAO,oBAAoB,EAAE,OAAO,QACpC,OAAO,oBAAoB,EAAE,OAAO,EAU9C;IALG,6CAEC;IAED,gBAAiC;CA0ExC;uBArGsB,iBAAiB"}

package/dist/src/data/sources/urlSource.js

@@ -34,6 +34,10 @@ export default class UrlSource extends DataSource {
         return JSON.stringify({ params: this.params, baseUrl: this.baseUrl });
     }
 
+    get label() {
+        return "urlSource";
+    }
+
     async load() {
         const url = withoutExprRef(this.params.url);
 

package/dist/src/data/transforms/aggregate.d.ts

@@ -1,18 +1,21 @@
-/**
- * A minimal aggregate transform that just counts grouped (by a single field) data items.
- * Work in progress.
- *
- * Eventually this will implement the most of Vega's aggregate transform:
- * https://vega.github.io/vega/docs/transforms/aggregate/
- */
-export default class AggregateTransform extends FlowNode {
+export default class AggregateTransform extends Transform {
     /**
      * @param {import("../../spec/transform.js").AggregateParams} params
+     *
+     * @typedef {import("../flowNode.js").Datum} Datum
      */
     constructor(params: import("../../spec/transform.js").AggregateParams);
     params: import("../../spec/transform.js").AggregateParams;
     /** @type {any[]} */
     buffer: any[];
+    /**
+     * @type {((arr: Datum[]) => number)[]}
+     */
+    ops: ((arr: import("../flowNode.js").Datum[]) => number)[];
+    /**
+     * @type {string[]}
+     */
+    as: string[];
 }
-import FlowNode from "../flowNode.js";
+import Transform from "./transform.js";
 //# sourceMappingURL=aggregate.d.ts.map

package/dist/src/data/transforms/aggregate.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"aggregate.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/aggregate.js"],"names":[],"mappings":"AAKA;;;;;;GAMG;AACH;IAKI;;OAEG;IACH,oBAFW,OAAO,yBAAyB,EAAE,eAAe,EAQ3D;IAJG,0DAAoB;IAEpB,oBAAoB;IACpB,QADW,GAAG,EAAE,CACA;CA4CvB;qBApEyC,gBAAgB"}
+{"version":3,"file":"aggregate.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/aggregate.js"],"names":[],"mappings":"AAOA;IAKI;;;;OAIG;IACH,oBAJW,OAAO,yBAAyB,EAAE,eAAe,EA6C3D;IAvCG,0DAAoB;IAEpB,oBAAoB;IACpB,QADW,GAAG,EAAE,CACA;IAEhB;;OAEG;IACH,iDAF6B,MAAM,IAEtB;IACb;;OAEG;IACH,IAFU,MAAM,EAAE,CAEN;CAiFnB;sBA5GqB,gBAAgB"}