@genome-spy/core 0.48.1 → 0.49.0

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Files changed (241) hide show
  1. package/dist/bundle/index.es.js +7485 -7097
  2. package/dist/bundle/index.js +124 -111
  3. package/dist/schema.json +838 -344
  4. package/dist/src/data/collector.d.ts +10 -8
  5. package/dist/src/data/collector.d.ts.map +1 -1
  6. package/dist/src/data/collector.js +131 -33
  7. package/dist/src/data/collector.test.d.ts +2 -0
  8. package/dist/src/data/collector.test.d.ts.map +1 -0
  9. package/dist/src/data/collector.test.js +55 -1
  10. package/dist/src/data/dataFlow.test.d.ts +2 -0
  11. package/dist/src/data/dataFlow.test.d.ts.map +1 -0
  12. package/dist/src/data/flow.test.d.ts +2 -0
  13. package/dist/src/data/flow.test.d.ts.map +1 -0
  14. package/dist/src/data/flow.test.js +19 -14
  15. package/dist/src/data/flowNode.test.d.ts +2 -0
  16. package/dist/src/data/flowNode.test.d.ts.map +1 -0
  17. package/dist/src/data/flowOptimizer.test.d.ts +2 -0
  18. package/dist/src/data/flowOptimizer.test.d.ts.map +1 -0
  19. package/dist/src/data/flowOptimizer.test.js +9 -10
  20. package/dist/src/data/formats/fasta.test.d.ts +2 -0
  21. package/dist/src/data/formats/fasta.test.d.ts.map +1 -0
  22. package/dist/src/data/sources/inlineSource.test.d.ts +2 -0
  23. package/dist/src/data/sources/inlineSource.test.d.ts.map +1 -0
  24. package/dist/src/data/sources/inlineSource.test.js +23 -16
  25. package/dist/src/data/sources/sequenceSource.test.d.ts +2 -0
  26. package/dist/src/data/sources/sequenceSource.test.d.ts.map +1 -0
  27. package/dist/src/data/sources/sequenceSource.test.js +59 -42
  28. package/dist/src/data/transforms/clone.test.d.ts +2 -0
  29. package/dist/src/data/transforms/clone.test.d.ts.map +1 -0
  30. package/dist/src/data/transforms/coverage.test.d.ts +2 -0
  31. package/dist/src/data/transforms/coverage.test.d.ts.map +1 -0
  32. package/dist/src/data/transforms/coverage.test.js +1 -1
  33. package/dist/src/data/transforms/filter.d.ts +10 -0
  34. package/dist/src/data/transforms/filter.d.ts.map +1 -1
  35. package/dist/src/data/transforms/filter.js +30 -1
  36. package/dist/src/data/transforms/filter.test.d.ts +2 -0
  37. package/dist/src/data/transforms/filter.test.d.ts.map +1 -0
  38. package/dist/src/data/transforms/flatten.test.d.ts +2 -0
  39. package/dist/src/data/transforms/flatten.test.d.ts.map +1 -0
  40. package/dist/src/data/transforms/flatten.test.js +10 -7
  41. package/dist/src/data/transforms/flattenDelimited.test.d.ts +2 -0
  42. package/dist/src/data/transforms/flattenDelimited.test.d.ts.map +1 -0
  43. package/dist/src/data/transforms/flattenDelimited.test.js +16 -13
  44. package/dist/src/data/transforms/flattenSequence.test.d.ts +2 -0
  45. package/dist/src/data/transforms/flattenSequence.test.d.ts.map +1 -0
  46. package/dist/src/data/transforms/flattenSequence.test.js +1 -1
  47. package/dist/src/data/transforms/formula.test.d.ts +2 -0
  48. package/dist/src/data/transforms/formula.test.d.ts.map +1 -0
  49. package/dist/src/data/transforms/formula.test.js +1 -1
  50. package/dist/src/data/transforms/identifier.d.ts +1 -1
  51. package/dist/src/data/transforms/identifier.d.ts.map +1 -1
  52. package/dist/src/data/transforms/identifier.js +2 -2
  53. package/dist/src/data/transforms/identifier.test.d.ts +2 -0
  54. package/dist/src/data/transforms/identifier.test.d.ts.map +1 -0
  55. package/dist/src/data/transforms/identifier.test.js +23 -14
  56. package/dist/src/data/transforms/pileup.test.d.ts +2 -0
  57. package/dist/src/data/transforms/pileup.test.d.ts.map +1 -0
  58. package/dist/src/data/transforms/project.test.d.ts +2 -0
  59. package/dist/src/data/transforms/project.test.d.ts.map +1 -0
  60. package/dist/src/data/transforms/project.test.js +1 -1
  61. package/dist/src/data/transforms/regexExtract.test.d.ts +2 -0
  62. package/dist/src/data/transforms/regexExtract.test.d.ts.map +1 -0
  63. package/dist/src/data/transforms/regexExtract.test.js +6 -3
  64. package/dist/src/data/transforms/regexFold.test.d.ts +2 -0
  65. package/dist/src/data/transforms/regexFold.test.d.ts.map +1 -0
  66. package/dist/src/data/transforms/sample.test.d.ts +2 -0
  67. package/dist/src/data/transforms/sample.test.d.ts.map +1 -0
  68. package/dist/src/data/transforms/stack.test.d.ts +2 -0
  69. package/dist/src/data/transforms/stack.test.d.ts.map +1 -0
  70. package/dist/src/data/transforms/stack.test.js +8 -8
  71. package/dist/src/encoder/accessor.d.ts +17 -14
  72. package/dist/src/encoder/accessor.d.ts.map +1 -1
  73. package/dist/src/encoder/accessor.js +127 -56
  74. package/dist/src/encoder/accessor.test.d.ts +2 -0
  75. package/dist/src/encoder/accessor.test.d.ts.map +1 -0
  76. package/dist/src/encoder/accessor.test.js +145 -31
  77. package/dist/src/encoder/encoder.d.ts +26 -13
  78. package/dist/src/encoder/encoder.d.ts.map +1 -1
  79. package/dist/src/encoder/encoder.js +98 -114
  80. package/dist/src/encoder/encoder.test.d.ts +2 -0
  81. package/dist/src/encoder/encoder.test.d.ts.map +1 -0
  82. package/dist/src/encoder/encoder.test.js +85 -82
  83. package/dist/src/fonts/bmFontManager.d.ts.map +1 -1
  84. package/dist/src/fonts/bmFontManager.js +10 -4
  85. package/dist/src/genome/genome.test.d.ts +2 -0
  86. package/dist/src/genome/genome.test.d.ts.map +1 -0
  87. package/dist/src/genome/scaleIndex.test.d.ts +2 -0
  88. package/dist/src/genome/scaleIndex.test.d.ts.map +1 -0
  89. package/dist/src/genome/scaleLocus.test.d.ts +2 -0
  90. package/dist/src/genome/scaleLocus.test.d.ts.map +1 -0
  91. package/dist/src/genomeSpy.d.ts +3 -2
  92. package/dist/src/genomeSpy.d.ts.map +1 -1
  93. package/dist/src/genomeSpy.js +29 -21
  94. package/dist/src/gl/dataToVertices.d.ts +5 -7
  95. package/dist/src/gl/dataToVertices.d.ts.map +1 -1
  96. package/dist/src/gl/dataToVertices.js +42 -30
  97. package/dist/src/gl/glslScaleGenerator.d.ts +84 -15
  98. package/dist/src/gl/glslScaleGenerator.d.ts.map +1 -1
  99. package/dist/src/gl/glslScaleGenerator.js +260 -73
  100. package/dist/src/gl/includes/picking.vertex.glsl.js +1 -1
  101. package/dist/src/marks/link.common.glsl.js +1 -1
  102. package/dist/src/marks/link.d.ts.map +1 -1
  103. package/dist/src/marks/link.js +10 -0
  104. package/dist/src/marks/link.vertex.glsl.js +1 -1
  105. package/dist/src/marks/mark.d.ts +6 -9
  106. package/dist/src/marks/mark.d.ts.map +1 -1
  107. package/dist/src/marks/mark.js +212 -95
  108. package/dist/src/marks/point.d.ts.map +1 -1
  109. package/dist/src/marks/point.js +5 -1
  110. package/dist/src/marks/rect.d.ts.map +1 -1
  111. package/dist/src/marks/rect.js +9 -4
  112. package/dist/src/marks/rule.d.ts.map +1 -1
  113. package/dist/src/marks/rule.js +4 -0
  114. package/dist/src/marks/text.d.ts.map +1 -1
  115. package/dist/src/marks/text.js +5 -1
  116. package/dist/src/scale/scale.test.d.ts +2 -0
  117. package/dist/src/scale/scale.test.d.ts.map +1 -0
  118. package/dist/src/scale/scale.test.js +2 -0
  119. package/dist/src/scale/ticks.test.d.ts +2 -0
  120. package/dist/src/scale/ticks.test.d.ts.map +1 -0
  121. package/dist/src/scale/ticks.test.js +6 -0
  122. package/dist/src/selection/selection.d.ts +39 -0
  123. package/dist/src/selection/selection.d.ts.map +1 -0
  124. package/dist/src/selection/selection.js +78 -0
  125. package/dist/src/spec/channel.d.ts +137 -83
  126. package/dist/src/spec/mark.d.ts +9 -0
  127. package/dist/src/spec/parameter.d.ts +112 -3
  128. package/dist/src/spec/root.d.ts +0 -1
  129. package/dist/src/spec/transform.d.ts +19 -1
  130. package/dist/src/spec/view.d.ts +3 -3
  131. package/dist/src/tooltip/dataTooltipHandler.js +1 -1
  132. package/dist/src/types/encoder.d.ts +80 -26
  133. package/dist/src/types/rendering.d.ts +1 -0
  134. package/dist/src/types/selectionTypes.d.ts +44 -0
  135. package/dist/src/types/viewContext.d.ts +1 -4
  136. package/dist/src/utils/addBaseUrl.test.d.ts +2 -0
  137. package/dist/src/utils/addBaseUrl.test.d.ts.map +1 -0
  138. package/dist/src/utils/animator.d.ts.map +1 -1
  139. package/dist/src/utils/animator.js +3 -1
  140. package/dist/src/utils/binnedIndex.test.d.ts +2 -0
  141. package/dist/src/utils/binnedIndex.test.d.ts.map +1 -0
  142. package/dist/src/utils/cloner.test.d.ts +2 -0
  143. package/dist/src/utils/cloner.test.d.ts.map +1 -0
  144. package/dist/src/utils/coalesce.test.d.ts +2 -0
  145. package/dist/src/utils/coalesce.test.d.ts.map +1 -0
  146. package/dist/src/utils/concatIterables.test.d.ts +2 -0
  147. package/dist/src/utils/concatIterables.test.d.ts.map +1 -0
  148. package/dist/src/utils/domainArray.test.d.ts +2 -0
  149. package/dist/src/utils/domainArray.test.d.ts.map +1 -0
  150. package/dist/src/utils/expression.d.ts +2 -2
  151. package/dist/src/utils/expression.d.ts.map +1 -1
  152. package/dist/src/utils/expression.js +11 -2
  153. package/dist/src/utils/indexer.test.d.ts +2 -0
  154. package/dist/src/utils/indexer.test.d.ts.map +1 -0
  155. package/dist/src/utils/inertia.d.ts.map +1 -1
  156. package/dist/src/utils/inertia.js +4 -0
  157. package/dist/src/utils/inputBinding.d.ts.map +1 -1
  158. package/dist/src/utils/inputBinding.js +4 -0
  159. package/dist/src/utils/iterateNestedMaps.d.ts +4 -3
  160. package/dist/src/utils/iterateNestedMaps.d.ts.map +1 -1
  161. package/dist/src/utils/iterateNestedMaps.js +3 -2
  162. package/dist/src/utils/iterateNestedMaps.test.d.ts +2 -0
  163. package/dist/src/utils/iterateNestedMaps.test.d.ts.map +1 -0
  164. package/dist/src/utils/kWayMerge.test.d.ts +2 -0
  165. package/dist/src/utils/kWayMerge.test.d.ts.map +1 -0
  166. package/dist/src/utils/mergeObjects.test.d.ts +2 -0
  167. package/dist/src/utils/mergeObjects.test.d.ts.map +1 -0
  168. package/dist/src/utils/numberExtractor.test.d.ts +2 -0
  169. package/dist/src/utils/numberExtractor.test.d.ts.map +1 -0
  170. package/dist/src/utils/propertyCacher.test.d.ts +2 -0
  171. package/dist/src/utils/propertyCacher.test.d.ts.map +1 -0
  172. package/dist/src/utils/propertyCoalescer.test.d.ts +2 -0
  173. package/dist/src/utils/propertyCoalescer.test.d.ts.map +1 -0
  174. package/dist/src/utils/propertyCoalescer.test.js +3 -0
  175. package/dist/src/utils/radixSort.d.ts +9 -0
  176. package/dist/src/utils/radixSort.d.ts.map +1 -0
  177. package/dist/src/utils/radixSort.js +130 -0
  178. package/dist/src/utils/radixSort.test.d.ts +2 -0
  179. package/dist/src/utils/radixSort.test.d.ts.map +1 -0
  180. package/dist/src/utils/radixSort.test.js +51 -0
  181. package/dist/src/utils/reservationMap.test.d.ts +2 -0
  182. package/dist/src/utils/reservationMap.test.d.ts.map +1 -0
  183. package/dist/src/utils/ringBuffer.test.d.ts +2 -0
  184. package/dist/src/utils/ringBuffer.test.d.ts.map +1 -0
  185. package/dist/src/utils/topK.test.d.ts +2 -0
  186. package/dist/src/utils/topK.test.d.ts.map +1 -0
  187. package/dist/src/utils/trees.test.d.ts +2 -0
  188. package/dist/src/utils/trees.test.d.ts.map +1 -0
  189. package/dist/src/utils/trees.test.js +8 -3
  190. package/dist/src/utils/variableTools.test.d.ts +2 -0
  191. package/dist/src/utils/variableTools.test.d.ts.map +1 -0
  192. package/dist/src/view/axisResolution.d.ts +19 -6
  193. package/dist/src/view/axisResolution.d.ts.map +1 -1
  194. package/dist/src/view/axisResolution.js +16 -7
  195. package/dist/src/view/axisResolution.test.d.ts +2 -0
  196. package/dist/src/view/axisResolution.test.d.ts.map +1 -0
  197. package/dist/src/view/axisResolution.test.js +16 -11
  198. package/dist/src/view/facetView.d.ts +1 -1
  199. package/dist/src/view/facetView.d.ts.map +1 -1
  200. package/dist/src/view/flowBuilder.d.ts +1 -1
  201. package/dist/src/view/flowBuilder.d.ts.map +1 -1
  202. package/dist/src/view/flowBuilder.js +34 -5
  203. package/dist/src/view/flowBuilder.test.d.ts +2 -0
  204. package/dist/src/view/flowBuilder.test.d.ts.map +1 -0
  205. package/dist/src/view/gridView.d.ts +0 -6
  206. package/dist/src/view/gridView.d.ts.map +1 -1
  207. package/dist/src/view/layerView.d.ts +0 -6
  208. package/dist/src/view/layerView.d.ts.map +1 -1
  209. package/dist/src/view/layout/flexLayout.test.d.ts +2 -0
  210. package/dist/src/view/layout/flexLayout.test.d.ts.map +1 -0
  211. package/dist/src/view/layout/grid.test.d.ts +2 -0
  212. package/dist/src/view/layout/grid.test.d.ts.map +1 -0
  213. package/dist/src/view/layout/rectangle.test.d.ts +2 -0
  214. package/dist/src/view/layout/rectangle.test.d.ts.map +1 -0
  215. package/dist/src/view/paramMediator.d.ts +32 -5
  216. package/dist/src/view/paramMediator.d.ts.map +1 -1
  217. package/dist/src/view/paramMediator.js +97 -9
  218. package/dist/src/view/paramMediator.test.d.ts +2 -0
  219. package/dist/src/view/paramMediator.test.d.ts.map +1 -0
  220. package/dist/src/view/paramMediator.test.js +17 -1
  221. package/dist/src/view/scaleResolution.d.ts +17 -9
  222. package/dist/src/view/scaleResolution.d.ts.map +1 -1
  223. package/dist/src/view/scaleResolution.js +51 -34
  224. package/dist/src/view/scaleResolution.test.d.ts +2 -0
  225. package/dist/src/view/scaleResolution.test.d.ts.map +1 -0
  226. package/dist/src/view/scaleResolution.test.js +2 -0
  227. package/dist/src/view/testUtils.d.ts.map +1 -1
  228. package/dist/src/view/testUtils.js +15 -3
  229. package/dist/src/view/unitView.d.ts +5 -15
  230. package/dist/src/view/unitView.d.ts.map +1 -1
  231. package/dist/src/view/unitView.js +81 -101
  232. package/dist/src/view/view.d.ts +1 -1
  233. package/dist/src/view/view.d.ts.map +1 -1
  234. package/dist/src/view/view.test.d.ts +2 -0
  235. package/dist/src/view/view.test.d.ts.map +1 -0
  236. package/dist/src/view/view.test.js +73 -55
  237. package/dist/src/view/viewFactory.test.d.ts +2 -0
  238. package/dist/src/view/viewFactory.test.d.ts.map +1 -0
  239. package/dist/src/view/viewFactory.test.js +2 -2
  240. package/dist/src/view/zoom.js +2 -2
  241. package/package.json +5 -2

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