@genome-spy/core 0.37.1 → 0.37.3

package/dist/src/data/transforms/project.test.js

@@ -1,6 +1,6 @@
 import { expect, test } from "vitest";
-import { processData } from "../flowTestUtils";
-import ProjectTransform from "./project";
+import { processData } from "../flowTestUtils.js";
+import ProjectTransform from "./project.js";
 
 test("Project", () => {
     const data = [

package/dist/src/data/transforms/regexExtract.d.ts

@@ -9,5 +9,5 @@ export default class RegexExtractTransform extends FlowNode {
      */
     handle: (datum: any) => void;
 }
-import FlowNode from "../flowNode";
+import FlowNode from "../flowNode.js";
 //# sourceMappingURL=regexExtract.d.ts.map

package/dist/src/data/transforms/regexExtract.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"regexExtract.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/regexExtract.js"],"names":[],"mappings":"AAIA;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,kBAAkB,EA6C3D;IApCG;;;OAGG;IACH,gBAFW,GAAG,UAiCb;CAER;qBAtD2C,aAAa"}
+{"version":3,"file":"regexExtract.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/regexExtract.js"],"names":[],"mappings":"AAIA;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,kBAAkB,EA6C3D;IApCG;;;OAGG;IACH,gBAFW,GAAG,UAiCb;CAER;qBAtD2C,gBAAgB"}

package/dist/src/data/transforms/regexExtract.js

@@ -1,6 +1,6 @@
 import { isString } from "vega-util";
-import { field } from "../../utils/field";
-import FlowNode, { BEHAVIOR_MODIFIES } from "../flowNode";
+import { field } from "../../utils/field.js";
+import FlowNode, { BEHAVIOR_MODIFIES } from "../flowNode.js";
 
 export default class RegexExtractTransform extends FlowNode {
     get behavior() {

package/dist/src/data/transforms/regexExtract.test.js

@@ -1,7 +1,7 @@
 import { describe, expect, test } from "vitest";
-import { processData } from "../flowTestUtils";
+import { processData } from "../flowTestUtils.js";
 
-import RegexExtractTransform from "./regexExtract";
+import RegexExtractTransform from "./regexExtract.js";
 
 /**
  * @param {import("./regexExtract").RegexExtractParams} params

package/dist/src/data/transforms/regexFold.d.ts

@@ -10,5 +10,5 @@ export default class RegexFoldTransform extends FlowNode {
     constructor(params: import("../../spec/transform").RegexFoldParams);
     handle: (datum: any) => void;
 }
-import FlowNode from "../flowNode";
+import FlowNode from "../flowNode.js";
 //# sourceMappingURL=regexFold.d.ts.map

package/dist/src/data/transforms/regexFold.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"regexFold.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/regexFold.js"],"names":[],"mappings":"AAGA;;;;GAIG;AACH;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,eAAe,EA2HxD;IAfO,gBALO,GAAG,UAKe;CAgBpC;qBAzIsD,aAAa"}
+{"version":3,"file":"regexFold.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/regexFold.js"],"names":[],"mappings":"AAGA;;;;GAIG;AACH;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,eAAe,EA2HxD;IAfO,gBALO,GAAG,UAKe;CAgBpC;qBAzIsD,gBAAgB"}

package/dist/src/data/transforms/regexFold.js

@@ -1,5 +1,5 @@
-import { asArray } from "../../utils/arrayUtils";
-import FlowNode, { BEHAVIOR_CLONES, isFileBatch } from "../flowNode";
+import { asArray } from "../../utils/arrayUtils.js";
+import FlowNode, { BEHAVIOR_CLONES, isFileBatch } from "../flowNode.js";
 
 /**
  * Folds fields using a regex

package/dist/src/data/transforms/regexFold.test.js

@@ -1,6 +1,6 @@
 import { describe, expect, test } from "vitest";
-import { processData } from "../flowTestUtils";
-import RegexFoldTransform from "./regexFold";
+import { processData } from "../flowTestUtils.js";
+import RegexFoldTransform from "./regexFold.js";
 
 describe("RegexFold", () => {
     test("Transform single variable", () => {

package/dist/src/data/transforms/sample.d.ts

@@ -38,5 +38,5 @@ export default class SampleTransform extends FlowNode {
     _finalIngester(item: any): void;
     _setNextStop(): void;
 }
-import FlowNode from "../flowNode";
+import FlowNode from "../flowNode.js";
 //# sourceMappingURL=sample.d.ts.map

package/dist/src/data/transforms/sample.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"sample.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/sample.js"],"names":[],"mappings":"AA6EA;;;;;;;;;GASG;AACH,wCAPW,MAAM,wDAkBhB;AAhGD;;GAEG;AACH;IACI;;;OAGG;IACH,oBAFW,OAAO,sBAAsB,EAAE,YAAY,EAOrD;IAFG,UAA2B;IAO3B,oBAAoB;IACpB,WADW,GAAG,EAAE,CACG;IACnB,qBAAqB;IACrB,GADW,MAAM,CACC;IAClB,kBAKO,GAAG,qBAgBH,GAAG,WArB2B;IAGzC;;;OAGG;IACH,uBAFW,GAAG,QAYb;IALO,UAAe;IACf,aAAkB;IAM1B;;;OAGG;IACH,qBAFW,GAAG,QAQb;IAED,qBAGC;CAiBJ;qBA3EoB,aAAa"}
+{"version":3,"file":"sample.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/sample.js"],"names":[],"mappings":"AA6EA;;;;;;;;;GASG;AACH,wCAPW,MAAM,wDAkBhB;AAhGD;;GAEG;AACH;IACI;;;OAGG;IACH,oBAFW,OAAO,sBAAsB,EAAE,YAAY,EAOrD;IAFG,UAA2B;IAO3B,oBAAoB;IACpB,WADW,GAAG,EAAE,CACG;IACnB,qBAAqB;IACrB,GADW,MAAM,CACC;IAClB,kBAKO,GAAG,qBAgBH,GAAG,WArB2B;IAGzC;;;OAGG;IACH,uBAFW,GAAG,QAYb;IALO,UAAe;IACf,aAAkB;IAM1B;;;OAGG;IACH,qBAFW,GAAG,QAQb;IAED,qBAGC;CAiBJ;qBA3EoB,gBAAgB"}

package/dist/src/data/transforms/sample.js

@@ -1,4 +1,4 @@
-import FlowNode from "../flowNode";
+import FlowNode from "../flowNode.js";
 
 /**
  * A reservoir sampler, based on: https://www.wikiwand.com/en/Reservoir_sampling

package/dist/src/data/transforms/sample.test.js

@@ -1,7 +1,7 @@
 import { expect, test } from "vitest";
-import SampleTransform from "./sample";
+import SampleTransform from "./sample.js";
 import { extent } from "d3-array";
-import { createChain } from "../../view/flowBuilder";
+import { createChain } from "../../view/flowBuilder.js";
 
 test("SampleTransform produces roughly uniform distributions", () => {
     const size = 10;

package/dist/src/data/transforms/stack.d.ts

@@ -7,5 +7,5 @@ export default class StackTransform extends FlowNode {
     /** @type {any[]} */
     buffer: any[];
 }
-import FlowNode from "../flowNode";
+import FlowNode from "../flowNode.js";
 //# sourceMappingURL=stack.d.ts.map

package/dist/src/data/transforms/stack.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"stack.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/stack.js"],"names":[],"mappings":"AAKA;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,WAAW,EAQpD;IAJG,mDAAoB;IAEpB,oBAAoB;IACpB,QADW,GAAG,EAAE,CACA;CAmHvB;qBAnI2C,aAAa"}
+{"version":3,"file":"stack.d.ts","sourceRoot":"","sources":["../../../../src/data/transforms/stack.js"],"names":[],"mappings":"AAKA;IAKI;;OAEG;IACH,oBAFW,OAAO,sBAAsB,EAAE,WAAW,EAQpD;IAJG,mDAAoB;IAEpB,oBAAoB;IACpB,QADW,GAAG,EAAE,CACA;CAmHvB;qBAnI2C,gBAAgB"}

package/dist/src/data/transforms/stack.js

@@ -1,7 +1,7 @@
 import { compare } from "vega-util";
 import { groups as d3groups, sum as d3sum } from "d3-array";
-import FlowNode, { BEHAVIOR_MODIFIES } from "../flowNode";
-import { field } from "../../utils/field";
+import FlowNode, { BEHAVIOR_MODIFIES } from "../flowNode.js";
+import { field } from "../../utils/field.js";
 
 export default class StackTransform extends FlowNode {
     get behavior() {

package/dist/src/data/transforms/stack.test.js

@@ -1,6 +1,6 @@
 import { describe, expect, test } from "vitest";
-import { processData } from "../flowTestUtils";
-import StackTransform from "./stack";
+import { processData } from "../flowTestUtils.js";
+import StackTransform from "./stack.js";
 
 const sampleData = [
     { group: "a", choice: "q", value: 1 },

package/dist/src/data/transforms/transformFactory.js

@@ -1,22 +1,22 @@
-import Collector from "../collector";
-import CoverageTransform from "./coverage";
-import FilterScoredLabelsTransform from "./filterScoredLabels";
-import FilterTransform from "./filter";
-import FlattenTransform from "./flatten";
-import FlattenCompressedExonsTransform from "./flattenCompressedExons";
-import FlattenDelimitedTransform from "./flattenDelimited";
-import FormulaTransform from "./formula";
-import LinearizeGenomicCoordinate from "./linearizeGenomicCoordinate";
-import MeasureTextTransform from "./measureText";
-import PileupTransform from "./pileup";
-import ProjectTransform from "./project";
-import RegexExtractTransform from "./regexExtract";
-import RegexFoldTransform from "./regexFold";
-import SampleTransform from "./sample";
-import StackTransform from "./stack";
-import FlattenSequenceTransform from "./flattenSequence";
-import AggregateTransform from "./aggregate";
-import IdentifierTransform from "./identifier";
+import Collector from "../collector.js";
+import CoverageTransform from "./coverage.js";
+import FilterScoredLabelsTransform from "./filterScoredLabels.js";
+import FilterTransform from "./filter.js";
+import FlattenTransform from "./flatten.js";
+import FlattenCompressedExonsTransform from "./flattenCompressedExons.js";
+import FlattenDelimitedTransform from "./flattenDelimited.js";
+import FormulaTransform from "./formula.js";
+import LinearizeGenomicCoordinate from "./linearizeGenomicCoordinate.js";
+import MeasureTextTransform from "./measureText.js";
+import PileupTransform from "./pileup.js";
+import ProjectTransform from "./project.js";
+import RegexExtractTransform from "./regexExtract.js";
+import RegexFoldTransform from "./regexFold.js";
+import SampleTransform from "./sample.js";
+import StackTransform from "./stack.js";
+import FlattenSequenceTransform from "./flattenSequence.js";
+import AggregateTransform from "./aggregate.js";
+import IdentifierTransform from "./identifier.js";
 
 /**
  * TODO: Make this dynamic

package/dist/src/encoder/accessor.js

@@ -1,8 +1,8 @@
-import createFunction from "../utils/expression";
+import createFunction from "../utils/expression.js";
 
 import { accessorFields, constant } from "vega-util";
-import { isDatumDef, isExprDef, isFieldDef } from "./encoder";
-import { field } from "../utils/field";
+import { isDatumDef, isExprDef, isFieldDef } from "./encoder.js";
+import { field } from "../utils/field.js";
 
 export default class AccessorFactory {
     /**

package/dist/src/encoder/accessor.test.js

@@ -1,5 +1,5 @@
 import { expect, test } from "vitest";
-import AccessorFactory from "./accessor";
+import AccessorFactory from "./accessor.js";
 
 const af = new AccessorFactory();
 

package/dist/src/encoder/encoder.js

@@ -1,6 +1,6 @@
 import { isDiscrete } from "vega-scale";
-import createIndexer from "../utils/indexer";
-import scaleNull from "../utils/scaleNull";
+import createIndexer from "../utils/indexer.js";
+import scaleNull from "../utils/scaleNull.js";
 
 /**
  * Creates an object that contains encoders for every channel of a mark

package/dist/src/encoder/encoder.test.js

@@ -1,8 +1,8 @@
 import { describe, expect, test } from "vitest";
-import AccessorFactory from "./accessor";
+import AccessorFactory from "./accessor.js";
 import { scale as vegaScale } from "vega-scale";
 
-import { createEncoder } from "./encoder";
+import { createEncoder } from "./encoder.js";
 
 describe("Encoder", () => {
     /** @type {Record<string, import("../view/viewUtils").ChannelDef>} */

package/dist/src/fonts/bmFontManager.d.ts

@@ -69,7 +69,7 @@ export default class BmFontManager {
     /**
      * @param {string} url
      */
-    _loadFont(url: string): Promise<import("./bmFontMetrics").BMFontMetrics>;
+    _loadFont(url: string): Promise<import("./bmFontMetrics.js").BMFontMetrics>;
     /**
      *
      * @param {string} family

package/dist/src/fonts/bmFontManager.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"bmFontManager.d.ts","sourceRoot":"","sources":["../../../src/fonts/bmFontManager.js"],"names":[],"mappings":"AAiBA;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH;IACI;;OAEG;IACH,0BAFW,OAAO,mBAAmB,EAAE,OAAO,EAgC7C;IA7BG,kDAA+B;IAE/B,uBACiF;IAEjF;;OAEG;IACH,QAFU,IAAI,OAAO,EAAE,SAAS,CAAC,CAEc;IAE/C,8DAA8D;IAC9D,mBADW,IAAI,MAAM,EAAE,QAAQ,uBAAuB,EAAE,CAAC,CAAC,CACxB;IAElC,kDAAkD;IAClD,eADW,IAAI,MAAM,EAAE,QAAQ,aAAa,CAAC,CAAC,CAChB;IAE9B,uEAAuE;IACvE,WADW,QAAQ,IAAI,CAAC,EAAE,CACP;IAEnB;;;OAGG;IACH,mBAFU,SAAS,CAOlB;IAGL,gCAEC;IAED;;;;;;OAMG;IACH,gBALW,MAAM,UACN,SAAS,WACT,UAAU,GAAG;;;;;;;;KAAa,GACxB,SAAS,CAyBrB;IAED;;;;OAIG;IACH,0BAHW,SAAS,OACT,OAAO,iBAwBjB;IAED;;OAEG;IACH,eAFW,MAAM,oDAoBhB;IAED;;;OAGG;IACH,sBAFW,MAAM,sCA2BhB;IAED,4BAEC;IAED;;;;OAIG;IACH,0BAHW,MAAM,GACJ,QAAQ,YAAY,CAAC,CAqBjC;IAED;;;;OAIG;IACH,6BAHW,MAAM,GACJ,YAAY,CA0BxB;CACJ;;;;;;;;;;UAgBS,MAAM;;;;WACN,MAAM;;;;YACN,MAAM;;;;cACN,MAAM;;;;sBACN,MAAM;;;;eACN,MAAM;;;;eACN,MAAM;;;;;;;;;qBA5PH,OAAO,iBAAiB,EAAE,MAAM;;;;;;;;4BAChC,OAAO,iBAAiB,EAAE,aAAa;;;;;;;;wBAEvC,QAAQ,GAAG,QAAQ;;;;;;;;yBACnB,MAAM;;;;;;;;;YAGT,MAAM;WACN,SAAS;YACT,UAAU;;;;;;;;;;aAGV,aAAa;aACb,YAAY"}
+{"version":3,"file":"bmFontManager.d.ts","sourceRoot":"","sources":["../../../src/fonts/bmFontManager.js"],"names":[],"mappings":"AAiBA;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH;IACI;;OAEG;IACH,0BAFW,OAAO,mBAAmB,EAAE,OAAO,EAgC7C;IA7BG,kDAA+B;IAE/B,uBACiF;IAEjF;;OAEG;IACH,QAFU,IAAI,OAAO,EAAE,SAAS,CAAC,CAEc;IAE/C,8DAA8D;IAC9D,mBADW,IAAI,MAAM,EAAE,QAAQ,uBAAuB,EAAE,CAAC,CAAC,CACxB;IAElC,kDAAkD;IAClD,eADW,IAAI,MAAM,EAAE,QAAQ,aAAa,CAAC,CAAC,CAChB;IAE9B,uEAAuE;IACvE,WADW,QAAQ,IAAI,CAAC,EAAE,CACP;IAEnB;;;OAGG;IACH,mBAFU,SAAS,CAOlB;IAGL,gCAEC;IAED;;;;;;OAMG;IACH,gBALW,MAAM,UACN,SAAS,WACT,UAAU,GAAG;;;;;;;;KAAa,GACxB,SAAS,CAyBrB;IAED;;;;OAIG;IACH,0BAHW,SAAS,OACT,OAAO,iBAwBjB;IAED;;OAEG;IACH,eAFW,MAAM,uDAoBhB;IAED;;;OAGG;IACH,sBAFW,MAAM,sCA2BhB;IAED,4BAEC;IAED;;;;OAIG;IACH,0BAHW,MAAM,GACJ,QAAQ,YAAY,CAAC,CAqBjC;IAED;;;;OAIG;IACH,6BAHW,MAAM,GACJ,YAAY,CA0BxB;CACJ;;;;;;;;;;UAgBS,MAAM;;;;WACN,MAAM;;;;YACN,MAAM;;;;cACN,MAAM;;;;sBACN,MAAM;;;;eACN,MAAM;;;;eACN,MAAM;;;;;;;;;qBA5PH,OAAO,iBAAiB,EAAE,MAAM;;;;;;;;4BAChC,OAAO,iBAAiB,EAAE,aAAa;;;;;;;;wBAEvC,QAAQ,GAAG,QAAQ;;;;;;;;yBACnB,MAAM;;;;;;;;;YAGT,MAAM;WACN,SAAS;YACT,UAAU;;;;;;;;;;aAGV,aAAa;aACb,YAAY"}

package/dist/src/fonts/bmFontManager.js

@@ -3,7 +3,7 @@ import { createTexture } from "twgl.js";
 import { isString } from "vega-util";
 import latoRegular from "../fonts/Lato-Regular.json";
 import latoRegularBitmap from "../fonts/Lato-Regular.png";
-import getMetrics from "./bmFontMetrics";
+import getMetrics from "./bmFontMetrics.js";
 
 const WEIGHTS = {
     thin: 100,

package/dist/src/genome/genome.js

@@ -2,7 +2,7 @@ import { bisect } from "d3-array";
 import { tsvParseRows } from "d3-dsv";
 import { loader } from "vega-loader";
 import { isObject } from "vega-util";
-import { formatRange } from "./locusFormat";
+import { formatRange } from "./locusFormat.js";
 
 const defaultBaseUrl = "https://genomespy.app/data/genomes/";
 

package/dist/src/genome/genome.test.js

@@ -1,5 +1,5 @@
 import { describe, expect, test } from "vitest";
-import Genome from "./genome";
+import Genome from "./genome.js";
 
 describe("Human genome, chromosome names prefixed with 'chr'", () => {
     // Actually, the chromosomes are just named as in hg38, for example

package/dist/src/genome/genomeStore.d.ts

@@ -16,5 +16,5 @@ export default class GenomeStore {
      */
     getGenome(name?: string): Genome;
 }
-import Genome from "./genome";
+import Genome from "./genome.js";
 //# sourceMappingURL=genomeStore.d.ts.map

package/dist/src/genome/genomeStore.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"genomeStore.d.ts","sourceRoot":"","sources":["../../../src/genome/genomeStore.js"],"names":[],"mappings":"AAEA;IACI;;OAEG;IACH,qBAFW,MAAM,EAMhB;IAHG,kCAAkC;IAClC,SADW,IAAI,MAAM,EAAE,MAAM,CAAC,CACN;IACxB,gBAAsB;IAG1B;;OAEG;IAEH,yBAHW,OAAO,gBAAgB,EAAE,YAAY,mBAY/C;IAED;;;OAGG;IACH,iBAHW,MAAM,GACJ,MAAM,CAuBlB;CACJ;mBArDkB,UAAU"}
+{"version":3,"file":"genomeStore.d.ts","sourceRoot":"","sources":["../../../src/genome/genomeStore.js"],"names":[],"mappings":"AAEA;IACI;;OAEG;IACH,qBAFW,MAAM,EAMhB;IAHG,kCAAkC;IAClC,SADW,IAAI,MAAM,EAAE,MAAM,CAAC,CACN;IACxB,gBAAsB;IAG1B;;OAEG;IAEH,yBAHW,OAAO,gBAAgB,EAAE,YAAY,mBAY/C;IAED;;;OAGG;IACH,iBAHW,MAAM,GACJ,MAAM,CAuBlB;CACJ;mBArDkB,aAAa"}

package/dist/src/genome/genomeStore.js

@@ -1,4 +1,4 @@
-import Genome from "./genome";
+import Genome from "./genome.js";
 
 export default class GenomeStore {
     /**

package/dist/src/genome/scaleIndex.test.js

@@ -1,5 +1,5 @@
 import { expect, test } from "vitest";
-import scaleIndex from "./scaleIndex";
+import scaleIndex from "./scaleIndex.js";
 
 test("Scale with defaults works as expected", () => {
     const scale = scaleIndex();

package/dist/src/genome/scaleLocus.test.js

@@ -1,4 +1,4 @@
 import { test } from "vitest";
-import scaleLocus from "./scaleLocus";
+import scaleLocus from "./scaleLocus.js";
 
 test.todo("Write some tests!");

package/dist/src/genomeSpy.d.ts

@@ -28,7 +28,7 @@ export default class GenomeSpy {
      *
      * @type {(view: View) => boolean}
      */
-    viewVisibilityPredicate: (view: import("./view/view").default) => boolean;
+    viewVisibilityPredicate: (view: import("./view/view.js").default) => boolean;
     /** @type {BufferedViewRenderingContext} */
     _renderingContext: BufferedViewRenderingContext;
     /** @type {BufferedViewRenderingContext} */
@@ -66,7 +66,7 @@ export default class GenomeSpy {
     /** @type {Record<string, import("./tooltip/tooltipHandler").TooltipHandler>}> */
     tooltipHandlers: Record<string, import("./tooltip/tooltipHandler").TooltipHandler>;
     /** @type {View} */
-    viewRoot: import("./view/view").default;
+    viewRoot: import("./view/view.js").default;
     /**
      *
      * @param {(name: string) => any[]} provider
@@ -123,19 +123,19 @@ export default class GenomeSpy {
     renderAll(): void;
     renderPickingFramebuffer(): void;
     getSearchableViews(): UnitView[];
-    getNamedScaleResolutions(): Map<string, import("./view/scaleResolution").default>;
+    getNamedScaleResolutions(): Map<string, import("./view/scaleResolution.js").default>;
 }
 /**
  * Events that are broadcasted to all views.
  */
 export type BroadcastEventType = "dataFlowBuilt" | "dataLoaded" | "layout" | "layoutComputed";
-import AccessorFactory from "./encoder/accessor";
-import { ViewFactory } from "./view/viewFactory";
-import Animator from "./utils/animator";
-import GenomeStore from "./genome/genomeStore";
-import BufferedViewRenderingContext from "./view/renderingContext/bufferedViewRenderingContext";
-import Inertia from "./utils/inertia";
-import WebGLHelper from "./gl/webGLHelper";
-import Tooltip from "./utils/ui/tooltip";
-import UnitView from "./view/unitView";
+import AccessorFactory from "./encoder/accessor.js";
+import { ViewFactory } from "./view/viewFactory.js";
+import Animator from "./utils/animator.js";
+import GenomeStore from "./genome/genomeStore.js";
+import BufferedViewRenderingContext from "./view/renderingContext/bufferedViewRenderingContext.js";
+import Inertia from "./utils/inertia.js";
+import WebGLHelper from "./gl/webGLHelper.js";
+import Tooltip from "./utils/ui/tooltip.js";
+import UnitView from "./view/unitView.js";
 //# sourceMappingURL=genomeSpy.d.ts.map

package/dist/src/genomeSpy.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"genomeSpy.d.ts","sourceRoot":"","sources":["../../src/genomeSpy.js"],"names":[],"mappings":"AA2CA;IACI;;;;;OAKG;IAEH;;;;;OAKG;IACH,uBAJW,WAAW,kDAEX,OAAO,kBAAkB,EAAE,YAAY,EA6EjD;IA1EG,uBAA0B;IAM1B,sCAAsC;IACtC,qCAAgB;IAEhB,iCAA4C;IAC5C,yBAAoC;IAEpC,4CAA4C;IAC5C,4BADqB,MAAM,KAAE,MAAM,EAAE,IACT;IAE5B,mBAAoD;IAEpD,0BAA0B;IAC1B,aADW,WAAW,CACM;IAE5B;;;;;OAKG;IACH,qEAF0B,OAAO,CAE8B;IAE/D,2CAA2C;IAC3C,mBADW,4BAA4B,CACL;IAClC,2CAA2C;IAC3C,iBADW,4BAA4B,CACP;IAEhC,oDAAoD;IACpD,6BAAgC;IAEhC;;;OAGG;IACH;cAFkB,OAAO,cAAc,EAAE,OAAO;eAAS,OAAO,iBAAiB,EAAE,KAAK;kBAAY,MAAM;MAE5E;IAE9B,uBAA+C;IAE/C;;;OAGG;IACH,wCAFgC,aAAa,KAAE,IAAI,KAEhB;IAEnC;;;;;;OAMG;IACH,yCAFkC,GAAG,KAAK,IAAI,GAEd;IAEhC;;;OAGG;IACH,kDAFkC,GAAG,KAAK,IAAI,GAEL;IAEzC,iFAAiF;IACjF,iBADW,OAAO,MAAM,EAAE,OAAO,0BAA0B,EAAE,cAAc,CAAC,CAK3E;IAED,mBAAmB;IACnB,2CAAyB;IAG7B;;;OAGG;IACH,2CAFkB,MAAM,KAAK,GAAG,EAAE,QAIjC;IAED;;OAEG;IACH,+BAFW,MAAM,YAShB;IAED;;;;OAIG;IACH,sBAHW,MAAM,QACN,GAAG,EAAE,QAaf;IAED;;;;;OAKG;IACH,gBAHW,kBAAkB,YAClB,GAAG,QAQb;IAED,0BA2BC;IAvBG,uBAOC;IAED,sCAA0D;IAK1D,iBAA0C;IAW9C;;OAEG;IACH,gBAiBC;IAED,sCAoLC;IAED;;;OAGG;IACH,UAFa,QAAQ,OAAO,CAAC,CAqC5B;IAED,4BA6IC;IAjIe,iCAAoC;IAmIpD;;;OAGG;IACH,kBAHW,MAAM,KACN,MAAM,QAiEhB;IAED;;;;;;;OAOG;IACH,oDAHuB,QAAQ,MAAM,GAAG,WAAW,GAAG,OAAO,KAAK,EAAE,cAAc,CAAC,QAYlF;IAED,sBAyCC;IAED,kBAIC;IAED,iCAOC;IAED,iCASC;IAED,qFAWC;CACJ;;;;iCA9tBY,eAAe,GAAG,YAAY,GAAG,QAAQ,GAAG,gBAAgB;4BAjC7C,uBAAuB;4BA2BvB,uBAAuB;qBAZ9B,qBAAqB;wBAIlB,yBAAyB;yCARR,yDAAyD;oBAYvD,oBAAoB;wBAdvC,qBAAqB;oBAXzB,uBAAuB;qBAStB,oBAAoB"}

package/dist/src/genomeSpy.js

@@ -1,38 +1,38 @@
 import { formats as vegaFormats } from "vega-loader";
 
 import css from "./styles/genome-spy.css.js";
-import Tooltip from "./utils/ui/tooltip";
+import Tooltip from "./utils/ui/tooltip.js";
 
-import AccessorFactory from "./encoder/accessor";
+import AccessorFactory from "./encoder/accessor.js";
 import {
     resolveScalesAndAxes,
     processImports,
     setImplicitScaleNames,
     calculateCanvasSize,
-} from "./view/viewUtils";
-import UnitView from "./view/unitView";
-
-import WebGLHelper from "./gl/webGLHelper";
-import Rectangle from "./utils/layout/rectangle";
-import BufferedViewRenderingContext from "./view/renderingContext/bufferedViewRenderingContext";
-import CompositeViewRenderingContext from "./view/renderingContext/compositeViewRenderingContext";
-import InteractionEvent from "./utils/interactionEvent";
-import Point from "./utils/layout/point";
-import Animator from "./utils/animator";
-import DataFlow from "./data/dataFlow";
-import { buildDataFlow } from "./view/flowBuilder";
-import { optimizeDataFlow } from "./data/flowOptimizer";
-import GenomeStore from "./genome/genomeStore";
-import BmFontManager from "./fonts/bmFontManager";
-import fasta from "./data/formats/fasta";
-import { VISIT_STOP } from "./view/view";
-import Inertia, { makeEventTemplate } from "./utils/inertia";
-import refseqGeneTooltipHandler from "./tooltip/refseqGeneTooltipHandler";
-import dataTooltipHandler from "./tooltip/dataTooltipHandler";
-import { invalidatePrefix } from "./utils/propertyCacher";
-import { ViewFactory } from "./view/viewFactory";
-import ImplicitRootView from "./view/implicitRootView";
-import { reconfigureScales } from "./view/scaleResolution";
+} from "./view/viewUtils.js";
+import UnitView from "./view/unitView.js";
+
+import WebGLHelper from "./gl/webGLHelper.js";
+import Rectangle from "./utils/layout/rectangle.js";
+import BufferedViewRenderingContext from "./view/renderingContext/bufferedViewRenderingContext.js";
+import CompositeViewRenderingContext from "./view/renderingContext/compositeViewRenderingContext.js";
+import InteractionEvent from "./utils/interactionEvent.js";
+import Point from "./utils/layout/point.js";
+import Animator from "./utils/animator.js";
+import DataFlow from "./data/dataFlow.js";
+import { buildDataFlow } from "./view/flowBuilder.js";
+import { optimizeDataFlow } from "./data/flowOptimizer.js";
+import GenomeStore from "./genome/genomeStore.js";
+import BmFontManager from "./fonts/bmFontManager.js";
+import fasta from "./data/formats/fasta.js";
+import { VISIT_STOP } from "./view/view.js";
+import Inertia, { makeEventTemplate } from "./utils/inertia.js";
+import refseqGeneTooltipHandler from "./tooltip/refseqGeneTooltipHandler.js";
+import dataTooltipHandler from "./tooltip/dataTooltipHandler.js";
+import { invalidatePrefix } from "./utils/propertyCacher.js";
+import { ViewFactory } from "./view/viewFactory.js";
+import ImplicitRootView from "./view/implicitRootView.js";
+import { reconfigureScales } from "./view/scaleResolution.js";
 
 /**
  * Events that are broadcasted to all views.

package/dist/src/gl/arrayBuilder.js

@@ -1,5 +1,5 @@
 import { isNumber } from "vega-util";
-import { ATTRIBUTE_PREFIX } from "../scale/glslScaleGenerator";
+import { ATTRIBUTE_PREFIX } from "../scale/glslScaleGenerator.js";
 
 /**
  * @typedef {Object} ConverterMetadata

package/dist/src/gl/dataToVertices.d.ts

@@ -60,7 +60,7 @@ export class GeometryBuilder {
     addToXIndex(datum: import("../data/flowNode").Datum): void;
     xIndexer: {
         (datum: any, startVertexIndex: number, endVertexIndex: number): void;
-        getIndex: () => import("../utils/binnedIndex").Lookup;
+        getIndex: () => import("../utils/binnedIndex.js").Lookup;
     };
     toArrays(): {
         /** @type {Record<string, {data: number[] | Float32Array, numComponents: number, divisor?: number}>} */
@@ -167,8 +167,8 @@ export class TextVertexBuilder extends GeometryBuilder {
         numCharacters?: number;
         logoLetters?: boolean;
     });
-    metadata: import("../fonts/bmFontMetrics").BMFontMetrics;
-    metrics: import("../fonts/bmFontMetrics").BMFontMetrics;
+    metadata: import("../fonts/bmFontMetrics.js").BMFontMetrics;
+    metrics: import("../fonts/bmFontMetrics.js").BMFontMetrics;
     properties: Record<string, any>;
     /** @type {(value: any) => string} */
     numberFormat: (value: any) => string;
@@ -190,5 +190,5 @@ export type RangeEntry = {
     count: number;
     xIndex: import("../utils/binnedIndex").Lookup;
 };
-import ArrayBuilder from "./arrayBuilder";
+import ArrayBuilder from "./arrayBuilder.js";
 //# sourceMappingURL=dataToVertices.d.ts.map

package/dist/src/gl/dataToVertices.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"dataToVertices.d.ts","sourceRoot":"","sources":["../../../src/gl/dataToVertices.js"],"names":[],"mappings":"AAaA;;;;;GAKG;AACH;IACI;;;OAGG;IAEH;;;;;;OAMG;IACH;;qBAJW,MAAM,EAAE;sBACR,MAAM;OAqDhB;IAjDG,6DAAwB;IAGxB;;MAKC;IAED,0BAAoC;IAEpC,8BAAoD;IAiCpD,mBAAmB;IAEnB,yFAAyF;IACzF,UADW,IAAI,GAAG,EAAE,UAAU,CAAC,CACkB;IAGrD;;;;OAIG;IACH,mBAFW,GAAG,QAcb;IAED;;OAEG;IACH,oBAFW,IAAI,GAAG,EAAE,MAAM,EAAE,CAAC,QAM5B;IAED;;;OAGG;IACH,cAHW,GAAG,QACH,MAAM,EAAE,kCAYlB;IAED;;;;OAIG;IACH,sBAJW,OAAO,kBAAkB,EAAE,IAAI,OAC/B,MAAM,OACN,MAAM,QAyDhB;IAED;;;;;OAKG;IACH,mBAFW,OAAO,kBAAkB,EAAE,KAAK,QAI1C;IAzDO;;;MAAyB;IA2DjC;QAEQ,uGAAuG;;kBAAtE,MAAM,EAAE,GAAG,YAAY;2BAAiB,MAAM;sBAAY,MAAM;;QAEjG,8BAA8B;;QAE9B,8CAA8C;;;MAIrD;CACJ;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;gCACR,MAAM;uBAEN,MAAM,EAAE;mBACR,MAAM;OAqBhB;IALG,uBAAgC;IAEhC,8BAA8D;IAE9D,6CAA+D;CAiFtE;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;gCACR,MAAM;uBAEN,MAAM,EAAE;mBACR,MAAM;OAsBhB;IANG,uBAAgC;IAEhC,8BAA8D;IAE9D,6CAA+D;IAC/D,4CAA6D;CA2CpE;AAED;IACI;;;;;;OAMG;IACH;;oBAHW,MAAM,EAAE;mBACR,MAAM;OAQhB;CACJ;AAED;IACI;;;;;OAKG;IACH;;oBAHW,MAAM,EAAE;mBACR,MAAM;OAQhB;CAYJ;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;qBACR,OAAO,wBAAwB,EAAE,aAAa;oBAC9C,OAAO,MAAM,EAAE,GAAG,CAAC;wBACnB,MAAM;sBACN,OAAO;OA4CjB;IA7BG,yDAA2B;IAC3B,wDAA0B;IAE1B,gCAA4B;IAQ5B,qCAAqC;IACrC,sBADmB,GAAG,KAAK,MAAM,CAMf;IAElB,oDAGC;IACD,qDAGC;IAED,8CAAiE;CA8IxE;;;;;;;;YA/mBS,MAAM;;;;WACN,MAAM;YACN,OAAO,sBAAsB,EAAE,MAAM;;yBAdtB,gBAAgB"}
+{"version":3,"file":"dataToVertices.d.ts","sourceRoot":"","sources":["../../../src/gl/dataToVertices.js"],"names":[],"mappings":"AAaA;;;;;GAKG;AACH;IACI;;;OAGG;IAEH;;;;;;OAMG;IACH;;qBAJW,MAAM,EAAE;sBACR,MAAM;OAqDhB;IAjDG,6DAAwB;IAGxB;;MAKC;IAED,0BAAoC;IAEpC,8BAAoD;IAiCpD,mBAAmB;IAEnB,yFAAyF;IACzF,UADW,IAAI,GAAG,EAAE,UAAU,CAAC,CACkB;IAGrD;;;;OAIG;IACH,mBAFW,GAAG,QAcb;IAED;;OAEG;IACH,oBAFW,IAAI,GAAG,EAAE,MAAM,EAAE,CAAC,QAM5B;IAED;;;OAGG;IACH,cAHW,GAAG,QACH,MAAM,EAAE,kCAYlB;IAED;;;;OAIG;IACH,sBAJW,OAAO,kBAAkB,EAAE,IAAI,OAC/B,MAAM,OACN,MAAM,QAyDhB;IAED;;;;;OAKG;IACH,mBAFW,OAAO,kBAAkB,EAAE,KAAK,QAI1C;IAzDO;;;MAAyB;IA2DjC;QAEQ,uGAAuG;;kBAAtE,MAAM,EAAE,GAAG,YAAY;2BAAiB,MAAM;sBAAY,MAAM;;QAEjG,8BAA8B;;QAE9B,8CAA8C;;;MAIrD;CACJ;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;gCACR,MAAM;uBAEN,MAAM,EAAE;mBACR,MAAM;OAqBhB;IALG,uBAAgC;IAEhC,8BAA8D;IAE9D,6CAA+D;CAiFtE;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;gCACR,MAAM;uBAEN,MAAM,EAAE;mBACR,MAAM;OAsBhB;IANG,uBAAgC;IAEhC,8BAA8D;IAE9D,6CAA+D;IAC/D,4CAA6D;CA2CpE;AAED;IACI;;;;;;OAMG;IACH;;oBAHW,MAAM,EAAE;mBACR,MAAM;OAQhB;CACJ;AAED;IACI;;;;;OAKG;IACH;;oBAHW,MAAM,EAAE;mBACR,MAAM;OAQhB;CAYJ;AAED;IACI;;;;;;;;;OASG;IACH;;oBANW,MAAM,EAAE;qBACR,OAAO,wBAAwB,EAAE,aAAa;oBAC9C,OAAO,MAAM,EAAE,GAAG,CAAC;wBACnB,MAAM;sBACN,OAAO;OA4CjB;IA7BG,4DAA2B;IAC3B,2DAA0B;IAE1B,gCAA4B;IAQ5B,qCAAqC;IACrC,sBADmB,GAAG,KAAK,MAAM,CAMf;IAElB,oDAGC;IACD,qDAGC;IAED,8CAAiE;CA8IxE;;;;;;;;YA/mBS,MAAM;;;;WACN,MAAM;YACN,OAAO,sBAAsB,EAAE,MAAM;;yBAdtB,mBAAmB"}

package/dist/src/gl/dataToVertices.js

@@ -1,14 +1,14 @@
 import { InternMap } from "internmap";
 import { format } from "d3-format";
 import { isString } from "vega-util";
-import ArrayBuilder from "./arrayBuilder";
-import { SDF_PADDING } from "../fonts/bmFontMetrics";
-import { createBinningRangeIndexer } from "../utils/binnedIndex";
-import { isValueDef } from "../encoder/encoder";
+import ArrayBuilder from "./arrayBuilder.js";
+import { SDF_PADDING } from "../fonts/bmFontMetrics.js";
+import { createBinningRangeIndexer } from "../utils/binnedIndex.js";
+import { isValueDef } from "../encoder/encoder.js";
 import {
     isHighPrecisionScale,
     splitHighPrecision,
-} from "../scale/glslScaleGenerator";
+} from "../scale/glslScaleGenerator.js";
 import { isContinuous } from "vega-scale";
 
 /**

package/dist/src/gl/webGLHelper.js

@@ -20,12 +20,12 @@ import {
     createDiscreteTexture,
     createInterpolatedColorTexture,
     createSchemeTexture,
-} from "../scale/colorUtils";
+} from "../scale/colorUtils.js";
 import {
     getDiscreteRangeMapper,
     isColorChannel,
     isDiscreteChannel,
-} from "../encoder/encoder";
+} from "../encoder/encoder.js";
 import { color } from "d3-color";
 
 export default class WebGLHelper {

package/dist/src/marks/link.d.ts

@@ -7,5 +7,5 @@ export default class LinkMark extends Mark {
         };
     };
 }
-import Mark from "./mark";
+import Mark from "./mark.js";
 //# sourceMappingURL=link.d.ts.map

package/dist/src/marks/link.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"link.d.ts","sourceRoot":"","sources":["../../../src/marks/link.js"],"names":[],"mappings":"AAOA;IAqGQ;;;;;;MAKC;CAkDR;iBA9JgB,QAAQ"}
+{"version":3,"file":"link.d.ts","sourceRoot":"","sources":["../../../src/marks/link.js"],"names":[],"mappings":"AAOA;IAqGQ;;;;;;MAKC;CAkDR;iBA9JgB,WAAW"}

package/dist/src/marks/link.js

@@ -1,9 +1,9 @@
 import { drawBufferInfo, setBuffersAndAttributes, setUniforms } from "twgl.js";
 import VERTEX_SHADER from "../gl/link.vertex.glsl.js";
 import FRAGMENT_SHADER from "../gl/link.fragment.glsl.js";
-import { ConnectionVertexBuilder } from "../gl/dataToVertices";
+import { ConnectionVertexBuilder } from "../gl/dataToVertices.js";
 
-import Mark from "./mark";
+import Mark from "./mark.js";
 
 export default class LinkMark extends Mark {
     /**

package/dist/src/marks/mark.d.ts

@@ -1,4 +1,4 @@
-/// <reference types="external-typings/internmap" />
+/// <reference types="external-typings/internmap.js" />
 export const SAMPLE_FACET_UNIFORM: "SAMPLE_FACET_UNIFORM";
 export const SAMPLE_FACET_TEXTURE: "SAMPLE_FACET_TEXTURE";
 /**
@@ -85,7 +85,7 @@ export default class Mark {
      * @returns {Encoding}
      */
     get encoding(): import("../spec/channel").Encoding<string>;
-    getContext(): import("../types/viewContext").default;
+    getContext(): import("../types/viewContext.js").default;
     getType(): import("../spec/mark").MarkType;
     initializeData(): void;
     /**
@@ -134,7 +134,7 @@ export default class Mark {
      */
     updateBufferInfo(vertexData: any): void;
     /** Convenience method */
-    get glHelper(): import("../gl/webGLHelper").default;
+    get glHelper(): import("../gl/webGLHelper.js").default;
     /** Convenience method */
     get gl(): WebGL2RenderingContext;
     onBeforeSampleAnimation(): void;

package/dist/src/marks/mark.d.ts.map

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